Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA3	21	broad.mit.edu	37	16	2328266	2328266	+	Intron	SNP	T	C	C	rs161425	by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67012369	67012369	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67012369	67012369	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16215759	16215759	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSBG2	81616	broad.mit.edu	37	19	6185748	6185748	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSBG2	81616	broad.mit.edu	37	19	6185748	6185748	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114674664	114674664	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64711462	64711462	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131792870	131792870	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131792870	131792870	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AES	166	broad.mit.edu	37	19	3054020	3054020	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105416019	105416019	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62284180	62284181	+	3'UTR	DEL	TA	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45935871	45935871	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45935871	45935871	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38429611	38429611	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD24	170961	broad.mit.edu	37	19	4216959	4216959	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD42	338699	broad.mit.edu	37	11	82917155	82917155	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD42	338699	broad.mit.edu	37	11	82917155	82917155	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1IP	54518	broad.mit.edu	37	10	26828336	26828337	+	Intron	INS	-	A	A	rs113271338		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36122951	36122951	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36122951	36122951	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP20	57569	broad.mit.edu	37	11	110482189	110482189	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24919055	24919055	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24919055	24919055	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1873704	1873704	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSD	414	broad.mit.edu	37	X	2825192	2825192	+	3'UTR	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB1	51665	broad.mit.edu	37	2	239355230	239355230	+	3'UTR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB1	51665	broad.mit.edu	37	2	239355230	239355230	+	3'UTR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176857323	176857323	+	Silent	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176857323	176857323	+	Silent	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323885	31323885	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323885	31323885	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28913763	28913763	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52534313	52534313	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52534313	52534313	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1783291	1783291	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79384943	79384943	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70034722	70034722	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70034722	70034722	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134360401	134360401	+	Missense_Mutation	SNP	G	T	T	rs147686110	by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134360401	134360401	+	Missense_Mutation	SNP	G	T	T	rs147686110	by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160545763	160545763	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf140	387640	broad.mit.edu	37	10	21805466	21805467	+	In_Frame_Ins	INS	-	CCTCCT	CCTCCT	rs138084841	by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112666073	112666074	+	Intron	INS	-	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf11	146325	broad.mit.edu	37	16	613967	613967	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf28	283987	broad.mit.edu	37	17	72958448	72958448	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf28	283987	broad.mit.edu	37	17	72958448	72958448	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf45	85019	broad.mit.edu	37	18	20878091	20878091	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf45	85019	broad.mit.edu	37	18	20878091	20878091	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf51	352909	broad.mit.edu	37	19	55671128	55671128	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038095	75038095	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038095	75038095	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf43	51233	broad.mit.edu	37	22	23964271	23964271	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf43	51233	broad.mit.edu	37	22	23964271	23964271	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf55	152078	broad.mit.edu	37	3	157271177	157271177	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf55	152078	broad.mit.edu	37	3	157271177	157271177	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113554386	113554386	+	5'UTR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113554386	113554386	+	5'UTR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf38	137682	broad.mit.edu	37	8	96047895	96047895	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf47	203111	broad.mit.edu	37	8	99102146	99102146	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf47	203111	broad.mit.edu	37	8	99102146	99102146	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2797654	2797654	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2797654	2797654	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN5	726	broad.mit.edu	37	11	76834887	76834887	+	Missense_Mutation	SNP	C	A	A	rs111264315	byFrequency;by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN7	23473	broad.mit.edu	37	3	15288224	15288224	+	Intron	DEL	T	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFA2T3	863	broad.mit.edu	37	16	88958851	88958851	+	Missense_Mutation	SNP	G	A	A	rs143862946		TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC116	164592	broad.mit.edu	37	22	21991045	21991045	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC39	339829	broad.mit.edu	37	3	180349114	180349114	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC16	8881	broad.mit.edu	37	13	115010538	115010538	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68857204	68857204	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59157904	59157904	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59157904	59157904	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK1	983	broad.mit.edu	37	10	62544479	62544479	+	Silent	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK1	983	broad.mit.edu	37	10	62544479	62544479	+	Silent	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48671025	48671025	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196965133	196965133	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196965133	196965133	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93489385	93489389	+	Frame_Shift_Del	DEL	ATTGC	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93489385	93489389	+	Frame_Shift_Del	DEL	ATTGC	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125513880	125513880	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	430872	430872	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB1	1140	broad.mit.edu	37	17	7357507	7357507	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKLF	51192	broad.mit.edu	37	16	66586481	66586481	+	5'UTR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141631428	141631428	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141631428	141631428	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100543525	100543525	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100543525	100543525	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100208350	100208350	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100208350	100208350	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75841736	75841736	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75833582	75833582	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75841736	75841736	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105815124	105815124	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109745531	109745531	+	Intron	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189858787	189858787	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261035	160261035	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46736906	46736906	+	3'UTR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46736906	46736906	+	3'UTR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA6	57094	broad.mit.edu	37	8	68658167	68658167	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA6	57094	broad.mit.edu	37	8	68658167	68658167	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE7	27132	broad.mit.edu	37	16	89652086	89652086	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125558758	125558758	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125558758	125558758	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2944626	2944626	+	Silent	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2944626	2944626	+	Silent	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34052206	34052206	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299491	113299491	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299491	113299491	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN2	1447	broad.mit.edu	37	4	70826587	70826587	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN2	1447	broad.mit.edu	37	4	70826587	70826587	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1P	283106	broad.mit.edu	37	11	11373388	11373388	+	3'UTR	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68139132	68139132	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND1	1500	broad.mit.edu	37	11	57569381	57569381	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND1	1500	broad.mit.edu	37	11	57569381	57569381	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111746138	111746138	+	Splice_Site	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15789113	15789113	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15789113	15789113	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15758117	15758117	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15758117	15758117	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4X1	260293	broad.mit.edu	37	1	47433266	47433266	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39847320	39847320	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39847320	39847320	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58521971	58521971	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58521971	58521971	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155698986	155698986	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155698986	155698986	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35369906	35369906	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35369906	35369906	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124337911	124337911	+	Intron	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124337911	124337911	+	Intron	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6588836	6588836	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6588836	6588836	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7555869	7555869	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYDC1	143241	broad.mit.edu	37	10	82112485	82112485	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I2	1781	broad.mit.edu	37	2	172569198	172569198	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL2	22936	broad.mit.edu	37	5	95224622	95224622	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOPH1	58478	broad.mit.edu	37	4	83351928	83351928	+	5'UTR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96963011	96963011	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96963011	96963011	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133786074	133786074	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113777081	113777081	+	5'Flank	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197026635	197026635	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A1	92689	broad.mit.edu	37	4	38937448	38937448	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A1	92689	broad.mit.edu	37	4	38937448	38937448	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	19027099	19027099	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	19027099	19027099	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A2	284069	broad.mit.edu	37	17	42443005	42443005	+	5'Flank	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30821598	30821598	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30821598	30821598	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL12	54850	broad.mit.edu	37	19	9931118	9931118	+	5'Flank	SNP	T	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCF1	51077	broad.mit.edu	37	14	75182766	75182766	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCF1	51077	broad.mit.edu	37	14	75182766	75182766	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240371207	240371207	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39357095	39357095	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39357095	39357095	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46980951	46980951	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALR1	2587	broad.mit.edu	37	18	74980512	74980512	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALR1	2587	broad.mit.edu	37	18	74980512	74980512	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GART	2618	broad.mit.edu	37	21	34883584	34883584	+	Silent	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GART	2618	broad.mit.edu	37	21	34883584	34883584	+	Silent	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBAS	2631	broad.mit.edu	37	7	56049805	56049805	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEM	2669	broad.mit.edu	37	8	95272446	95272446	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEM	2669	broad.mit.edu	37	8	95272446	95272446	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134215102	134215102	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74526922	74526922	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74526922	74526922	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD2	2747	broad.mit.edu	37	X	120182373	120182374	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD2	2747	broad.mit.edu	37	X	120182373	120182374	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL1	92292	broad.mit.edu	37	11	58711127	58711127	+	Translation_Start_Site	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL1	92292	broad.mit.edu	37	11	58711127	58711127	+	Translation_Start_Site	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6L10	647042	broad.mit.edu	37	15	82881483	82881483	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC1	2817	broad.mit.edu	37	2	241401823	241401823	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1A	57655	broad.mit.edu	37	19	35502353	35502354	+	Intron	DEL	CT	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123474362	123474362	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123489404	123489404	+	Silent	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123489404	123489404	+	Silent	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD4	23151	broad.mit.edu	37	22	47059644	47059644	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMB	55876	broad.mit.edu	37	17	38066035	38066035	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMB	55876	broad.mit.edu	37	17	38066035	38066035	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H6PD	9563	broad.mit.edu	37	1	9307018	9307018	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43400350	43400350	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65120247	65120247	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC5	51191	broad.mit.edu	37	4	89425351	89425351	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC5	51191	broad.mit.edu	37	4	89425351	89425351	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXDC	284004	broad.mit.edu	37	17	80399755	80399755	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3D	8351	broad.mit.edu	37	6	26199716	26199716	+	5'Flank	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3D	8351	broad.mit.edu	37	6	26199716	26199716	+	5'Flank	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-F	3134	broad.mit.edu	37	6	29691112	29691112	+	5'Flank	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-F	3134	broad.mit.edu	37	6	29691112	29691112	+	5'Flank	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA11	3207	broad.mit.edu	37	7	27222458	27222459	+	Missense_Mutation	DNP	TT	AG	AG			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA11	3207	broad.mit.edu	37	7	27222458	27222459	+	Missense_Mutation	DNP	TT	AG	AG			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209878375	209878376	+	Splice_Site	DNP	GG	TT	TT			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209878375	209878376	+	Splice_Site	DNP	GG	TT	TT			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154875952	154875952	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154875952	154875952	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD1	3475	broad.mit.edu	37	7	112096892	112096892	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD1	3475	broad.mit.edu	37	7	112096892	112096892	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41143264	41143264	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41143264	41143264	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160061677	160061677	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160061677	160061677	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114242517	114242517	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA2	3598	broad.mit.edu	37	X	114242517	114242517	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71946219	71946219	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71946219	71946219	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSR	3643	broad.mit.edu	37	19	7117440	7117440	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSR	3643	broad.mit.edu	37	19	7117440	7117440	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	90992935	90992935	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75936794	75936794	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75936794	75936794	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX2	153572	broad.mit.edu	37	5	2749785	2749785	+	Silent	SNP	C	A	A	rs61742405	byFrequency;by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX2	153572	broad.mit.edu	37	5	2749785	2749785	+	Silent	SNP	C	A	A	rs61742405	byFrequency;by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20449144	20449144	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20449144	20449144	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK3	3718	broad.mit.edu	37	19	17952644	17952645	+	Intron	INS	-	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55955043	55955043	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55955043	55955043	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHSRP	8570	broad.mit.edu	37	19	6414204	6414204	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24578217	24578217	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24578217	24578217	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27782766	27782766	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94173015	94173015	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94173015	94173015	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1467	57613	broad.mit.edu	37	12	13229033	13229033	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1467	57613	broad.mit.edu	37	12	13229033	13229033	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43493621	43493621	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43493621	43493621	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1967	57805	broad.mit.edu	37	8	22463167	22463170	+	Intron	DEL	CTTA	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72338984	72338984	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51902309	51902309	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51902309	51902309	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126343405	126343405	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC2	3822	broad.mit.edu	37	12	10584778	10584778	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC2	3822	broad.mit.edu	37	12	10584778	10584778	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	A	A	rs121913529		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	A	A	rs121913529		TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-7	100132476	broad.mit.edu	37	17	39240908	39240908	+	Silent	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651191	1651199	+	In_Frame_Del	DEL	GGCTGTGGA	-	-	rs144216147		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTDAP	388533	broad.mit.edu	37	19	35979505	35979505	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTDAP	388533	broad.mit.edu	37	19	35979505	35979505	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4	113251	broad.mit.edu	37	12	50856480	50856480	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT	27040	broad.mit.edu	37	16	28996766	28996766	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT	27040	broad.mit.edu	37	16	28996766	28996766	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38510461	38510461	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55144063	55144063	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55144063	55144063	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD1	55788	broad.mit.edu	37	6	70490551	70490551	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD1	55788	broad.mit.edu	37	6	70490551	70490551	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC220429	220429	broad.mit.edu	37	13	50466435	50466435	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7155653	7155653	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389458	389458	broad.mit.edu	37	7	5071265	5071265	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389458	389458	broad.mit.edu	37	7	5071265	5071265	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP1	9361	broad.mit.edu	37	19	5696662	5696662	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99772407	99772407	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99772407	99772407	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133812255	133812255	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133812255	133812255	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC50	123872	broad.mit.edu	37	16	84210041	84210041	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52864149	52864149	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52864149	52864149	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN3	54674	broad.mit.edu	37	7	110764933	110764933	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33572578	33572578	+	Splice_Site	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33572578	33572578	+	Splice_Site	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39760730	39760730	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEL2	54551	broad.mit.edu	37	15	23889920	23889920	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65479199	65479199	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65479199	65479199	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K1	11184	broad.mit.edu	37	19	39086484	39086484	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM2	4193	broad.mit.edu	37	12	69218332	69218332	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM2	4193	broad.mit.edu	37	12	69218332	69218332	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFRP	83552	broad.mit.edu	37	11	119217000	119217000	+	Missense_Mutation	SNP	C	T	T	rs143802236	byFrequency	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP1	4312	broad.mit.edu	37	11	102667829	102667829	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP1	4312	broad.mit.edu	37	11	102667829	102667829	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113217566	113217566	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113217566	113217566	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL22	29093	broad.mit.edu	37	5	154336621	154336621	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL22	29093	broad.mit.edu	37	5	154336621	154336621	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS27	23107	broad.mit.edu	37	5	71616090	71616090	+	5'Flank	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS27	23107	broad.mit.edu	37	5	71616090	71616090	+	5'Flank	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86565744	86565744	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195483794	195483794	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYADML	151325	broad.mit.edu	37	2	33952372	33952372	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEOV	26579	broad.mit.edu	37	11	69063507	69063507	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10443185	10443185	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10443185	10443185	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23895295	23895295	+	Intron	DEL	G	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23900897	23900897	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128391816	128391816	+	Silent	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78542638	78542638	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78542638	78542638	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15519604	15519605	+	Intron	DNP	CC	AA	AA			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36129238	36129238	+	Silent	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	146419870	146419870	+	Intron	SNP	A	C	C	rs139348590	by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16918147	16918147	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK7	140609	broad.mit.edu	37	1	198233234	198233234	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK7	140609	broad.mit.edu	37	1	198233234	198233234	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHP2L1	4809	broad.mit.edu	37	22	42076225	42076225	+	Intron	SNP	A	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHP2L1	4809	broad.mit.edu	37	22	42076225	42076225	+	Intron	SNP	A	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKIRAS1	28512	broad.mit.edu	37	3	23934429	23934429	+	3'UTR	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKIRAS1	28512	broad.mit.edu	37	3	23934429	23934429	+	3'UTR	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL4	8715	broad.mit.edu	37	18	31523045	31523045	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL4	8715	broad.mit.edu	37	18	31523045	31523045	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117715715	117715715	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117715715	117715715	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTXR	23467	broad.mit.edu	37	22	39218644	39218644	+	Silent	SNP	G	A	A	rs145163836		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTXR	23467	broad.mit.edu	37	22	39218644	39218644	+	Silent	SNP	G	A	A	rs145163836		TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51148976	51148976	+	Intron	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50850437	50850437	+	Intron	DEL	C	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51148976	51148976	+	Intron	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163296025	163296025	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163296025	163296025	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101087499	101087499	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101087499	101087499	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50946204	50946204	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50946204	50946204	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44713244	44713244	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H1	81061	broad.mit.edu	37	22	16449040	16449040	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H1	81061	broad.mit.edu	37	22	16449040	16449040	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1F2P	26184	broad.mit.edu	37	16	3266457	3266457	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1F2P	26184	broad.mit.edu	37	16	3266457	3266457	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248367162	248367162	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248367162	248367162	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A4	401666	broad.mit.edu	37	11	4967760	4967760	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A4	401666	broad.mit.edu	37	11	4967760	4967760	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52J3	119679	broad.mit.edu	37	11	5068314	5068314	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52J3	119679	broad.mit.edu	37	11	5068314	5068314	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C65	403282	broad.mit.edu	37	12	55794443	55794443	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C65	403282	broad.mit.edu	37	12	55794443	55794443	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9Q2	219957	broad.mit.edu	37	11	57958720	57958720	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9Q2	219957	broad.mit.edu	37	11	57958720	57958720	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31921384	31921384	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31921384	31921384	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSCAR	126014	broad.mit.edu	37	19	54598413	54598413	+	3'UTR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAF1	54623	broad.mit.edu	37	19	39879075	39879075	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAF1	54623	broad.mit.edu	37	19	39879075	39879075	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD7	11044	broad.mit.edu	37	5	6748515	6748515	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR8	85315	broad.mit.edu	37	6	52268034	52268034	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34408748	34408748	+	Intron	SNP	C	G	G	rs12359856		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP9	83666	broad.mit.edu	37	3	122264136	122264136	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91770429	91770429	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91770429	91770429	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56360378	56360378	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56360378	56360378	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140256557	140256557	+	Silent	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140256557	140256557	+	Silent	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140165844	140165844	+	5'Flank	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140165844	140165844	+	5'Flank	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA8	56140	broad.mit.edu	37	5	140221181	140221181	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA8	56140	broad.mit.edu	37	5	140221181	140221181	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1LG2	80380	broad.mit.edu	37	9	5522564	5522564	+	Silent	SNP	A	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183094703	183094703	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	656178	656178	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54256564	54256564	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179519752	179519752	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179519752	179519752	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHB2	11331	broad.mit.edu	37	12	7074755	7074755	+	3'UTR	SNP	C	T	T	rs139605168	by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8726638	8726638	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8726638	8726638	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88968092	88968092	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88968092	88968092	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160833114	160833114	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD1	5333	broad.mit.edu	37	3	38057997	38057997	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK2	26499	broad.mit.edu	37	14	67854239	67854239	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK2	26499	broad.mit.edu	37	14	67854239	67854239	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR5	389158	broad.mit.edu	37	3	146318077	146318077	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132193285	132193285	+	Silent	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132193285	132193285	+	Silent	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNCK	139728	broad.mit.edu	37	X	152936128	152936128	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP2	5408	broad.mit.edu	37	10	118383639	118383639	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POFUT2	23275	broad.mit.edu	37	21	46697007	46697007	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POFUT2	23275	broad.mit.edu	37	21	46697007	46697007	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121	9883	broad.mit.edu	37	7	72400808	72400808	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F1	5451	broad.mit.edu	37	1	167339543	167339543	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1B	5495	broad.mit.edu	37	2	44429147	44429147	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1B	5495	broad.mit.edu	37	2	44429147	44429147	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAB1	5564	broad.mit.edu	37	12	120110200	120110201	+	Frame_Shift_Ins	INS	-	G	G	rs115821895	byFrequency;by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR19	284338	broad.mit.edu	37	19	42814722	42814723	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45121099	45121099	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5	55615	broad.mit.edu	37	22	45075718	45075718	+	Silent	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG3	5671	broad.mit.edu	37	19	43241393	43241393	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43257324	43257324	+	3'UTR	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43257330	43257330	+	3'UTR	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD13	5719	broad.mit.edu	37	11	251770	251770	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD13	5719	broad.mit.edu	37	11	251770	251770	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPLB	201562	broad.mit.edu	37	3	123301187	123301187	+	Intron	SNP	A	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPLB	201562	broad.mit.edu	37	3	123301187	123301187	+	Intron	SNP	A	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8528763	8528763	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8528763	8528763	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	7926632	7926632	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	7926632	7926632	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37163694	37163694	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37163694	37163694	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS	5917	broad.mit.edu	37	5	167933091	167933091	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS	5917	broad.mit.edu	37	5	167933091	167933091	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120336725	120336725	+	3'UTR	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120336725	120336725	+	3'UTR	SNP	T	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103162494	103162494	+	Missense_Mutation	SNP	G	A	A	rs139106600		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103162494	103162494	+	Missense_Mutation	SNP	G	A	A	rs139106600		TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETN	56729	broad.mit.edu	37	19	7734143	7734143	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETN	56729	broad.mit.edu	37	19	7734143	7734143	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS19	10287	broad.mit.edu	37	20	62708014	62708014	+	Intron	SNP	G	A	A	rs41302950	by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72939799	72939799	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF165	494470	broad.mit.edu	37	18	44030342	44030342	+	Silent	SNP	C	T	T	rs145234061	byFrequency	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78359234	78359234	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78359234	78359234	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467287	10467287	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467287	10467287	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128367	152128367	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128367	152128367	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78674580	78674580	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN4IP1	84816	broad.mit.edu	37	6	107066962	107066962	+	Intron	SNP	A	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608842	237608842	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608842	237608842	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38938754	38938754	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38991567	38991567	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38938754	38938754	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAP1	255812	broad.mit.edu	37	3	195713573	195713573	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71395250	71395250	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115782618	115782618	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115782618	115782618	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	47873557	47873557	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	47873557	47873557	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT2	4735	broad.mit.edu	37	2	242274648	242274648	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT2	4735	broad.mit.edu	37	2	242274648	242274648	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC3	10955	broad.mit.edu	37	20	43150491	43150491	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42532619	42532619	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42532619	42532619	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B1	25970	broad.mit.edu	37	16	28877650	28877650	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22364584	22364584	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A24	29957	broad.mit.edu	37	1	108681844	108681844	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A24	29957	broad.mit.edu	37	1	108681844	108681844	+	Intron	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35D2	11046	broad.mit.edu	37	9	99122536	99122536	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35D2	11046	broad.mit.edu	37	9	99122536	99122536	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18270479	18270479	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18270479	18270479	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A2	6530	broad.mit.edu	37	16	55733932	55733932	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106878424	106878424	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121759333	121759333	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNCAIP	9627	broad.mit.edu	37	5	121759333	121759333	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-24	767604	broad.mit.edu	37	14	101450286	101450286	+	5'Flank	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51617263	51617264	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51617263	51617264	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108336880	108336880	+	3'UTR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121425746	121425746	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121425746	121425746	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118554977	118554977	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118554977	118554977	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24860373	24860373	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24860373	24860373	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG20	23111	broad.mit.edu	37	13	36909408	36909408	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK2	9806	broad.mit.edu	37	10	73832446	73832446	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158606656	158606656	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158627290	158627290	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158606656	158606656	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158627290	158627290	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH3	54961	broad.mit.edu	37	11	67071582	67071582	+	Intron	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130060140	130060140	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP2	55620	broad.mit.edu	37	19	4327149	4327149	+	Silent	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP2	55620	broad.mit.edu	37	19	4327149	4327149	+	Silent	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN4	29888	broad.mit.edu	37	19	47225900	47225900	+	Intron	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	29996668	29996668	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52936899	52936899	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124156732	124156732	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65155514	65155515	+	Intron	DNP	TG	GA	GA			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65155514	65155515	+	Intron	DNP	TG	GA	GA			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	120989078	120989078	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	120989078	120989078	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53447534	53447534	+	Intron	DEL	T	-	-			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF2	7032	broad.mit.edu	37	21	43767496	43767496	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM5	9333	broad.mit.edu	37	15	43548676	43548676	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM5	9333	broad.mit.edu	37	15	43548676	43548676	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133894662	133894662	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133894662	133894662	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOP1	7064	broad.mit.edu	37	19	2794929	2794929	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOP1	7064	broad.mit.edu	37	19	2794929	2794929	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD4	79875	broad.mit.edu	37	15	72037537	72037537	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD4	79875	broad.mit.edu	37	15	72037537	72037537	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	69056932	69056932	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	69056932	69056932	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44119729	44119729	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68934606	68934606	+	Intron	DEL	G	-	-			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83251161	83251161	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83251161	83251161	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN1	53373	broad.mit.edu	37	12	113723680	113723680	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72355191	72355191	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10942878	10942878	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10942878	10942878	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM22	10346	broad.mit.edu	37	11	5730700	5730700	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM22	10346	broad.mit.edu	37	11	5730700	5730700	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234835266	234835266	+	Silent	SNP	G	A	A	rs149381224		TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234835266	234835266	+	Silent	SNP	G	A	A	rs149381224		TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC37	9652	broad.mit.edu	37	5	94818288	94818288	+	Silent	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC37	9652	broad.mit.edu	37	5	94818288	94818288	+	Silent	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2CBP	90025	broad.mit.edu	37	6	83775392	83775392	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17738431	17738431	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35453212	35453212	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35453212	35453212	+	Intron	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216074227	216074227	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216074227	216074227	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82536542	82536542	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4232560	4232560	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59189369	59189369	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17553687	17553687	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34319468	34319468	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	46844418	46844418	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104466	59104466	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137526	20137526	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97094564	97094564	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490057	32490057	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380112	33380112	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88226618	88226618	+	IGR	SNP	A	G	G	rs149645617	by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26034164	26034164	+	IGR	SNP	A	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14144760	14144760	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	21148004	21148004	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44975890	44975890	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149099661	149099661	+	IGR	SNP	A	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	171639614	171639614	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	226626678	226626678	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	86807594	86807594	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10367779	10367779	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	229217386	229217386	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96212355	96212355	+	IGR	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180605533	180605533	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76483131	76483131	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	54153386	54153386	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	114529131	114529131	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	16624944	16624944	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57084369	57084369	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020493	63020493	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020585	63020585	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028250	63028250	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84613523	84613523	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	58720744	58720744	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	112295104	112295104	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	34917497	34917497	+	IGR	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43609363	43609363	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69845943	69845943	+	IGR	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144258289	144258289	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144258300	144258300	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144258363	144258363	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47657350	47657350	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55199840	55199840	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73094938	73094938	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82536542	82536542	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124351604	124351604	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59189369	59189369	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17553687	17553687	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	46844418	46844418	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	51770097	51770097	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104466	59104466	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137526	20137526	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102277518	102277518	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97094564	97094564	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380112	33380112	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34480505	34480505	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26034164	26034164	+	IGR	SNP	A	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44975890	44975890	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143378864	143378864	+	IGR	SNP	A	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149099661	149099661	+	IGR	SNP	A	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	171639614	171639614	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	226626678	226626678	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	86807594	86807594	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10367779	10367779	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	104111077	104111077	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132113200	132113200	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	229217386	229217386	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96212355	96212355	+	IGR	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	114998316	114998317	+	IGR	INS	-	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180605533	180605533	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76483131	76483131	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63114174	63114174	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9705349	9705349	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	54153386	54153386	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75375637	75375637	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141511649	141511649	+	IGR	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	16624944	16624944	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028250	63028250	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	84613523	84613523	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48033996	48033996	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	85074567	85074567	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	34917497	34917497	+	IGR	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43609363	43609363	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144258363	144258363	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144258366	144258366	+	IGR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144258495	144258495	+	IGR	SNP	G	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55199840	55199840	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5613876	5613876	+	IGR	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73094938	73094938	+	IGR	SNP	C	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	28733657	28733657	+	IGR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82815769	82815769	+	Silent	SNP	T	C	C			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82815769	82815769	+	Silent	SNP	T	C	C			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51470450	51470450	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51470450	51470450	+	Intron	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85594618	85594618	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37506359	37506359	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37506359	37506359	+	Intron	SNP	A	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175437101	175437101	+	Silent	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175437101	175437101	+	Silent	SNP	T	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO7	23039	broad.mit.edu	37	8	21853061	21853061	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO7	23039	broad.mit.edu	37	8	21853061	21853061	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183508517	183508517	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183508517	183508517	+	Intron	SNP	T	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB16	7704	broad.mit.edu	37	11	114113048	114113048	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB16	7704	broad.mit.edu	37	11	114113048	114113048	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37354826	37354826	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37354826	37354826	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81066195	81066196	+	Intron	DNP	GG	AT	AT			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81066195	81066196	+	Intron	DNP	GG	AT	AT			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22191531	22191531	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF287	57336	broad.mit.edu	37	17	16470691	16470691	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF287	57336	broad.mit.edu	37	17	16470691	16470691	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95847911	95847911	+	3'UTR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95847911	95847911	+	3'UTR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF43	7594	broad.mit.edu	37	19	21991490	21991491	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF43	7594	broad.mit.edu	37	19	21991490	21991491	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF474	133923	broad.mit.edu	37	5	121488874	121488874	+	3'UTR	SNP	A	T	T	rs145478648	by1000genomes	TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF474	133923	broad.mit.edu	37	5	121488874	121488874	+	3'UTR	SNP	A	T	T	rs145478648	by1000genomes	TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF662	389114	broad.mit.edu	37	3	42956891	42956891	+	3'UTR	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF662	389114	broad.mit.edu	37	3	42956891	42956891	+	3'UTR	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26694078	26694078	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26694078	26694078	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF80	7634	broad.mit.edu	37	3	113955934	113955934	+	5'UTR	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF80	7634	broad.mit.edu	37	3	113955934	113955934	+	5'UTR	SNP	G	A	A			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58551855	58551855	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58551855	58551855	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102320159	102320159	+	5'Flank	SNP	T	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28600154	28600154	+	Splice_Site	SNP	T	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84945241	84945241	+	RNA	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33784612	33784612	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180491613	180491613	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135249591	135249591	+	5'Flank	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	M	1551	1551	+	5'Flank	SNP	G	A	A			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102320159	102320159	+	5'Flank	SNP	T	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84945241	84945241	+	RNA	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	70266561	70266561	+	Intron	SNP	C	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180491613	180491613	+	Intron	SNP	C	G	G			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17134828	17134828	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01D-1040-01	TCGA-67-3773-10A-01D-1489-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17134828	17134828	+	Intron	SNP	G	T	T			TCGA-67-3773-01A-01W-0928-08	TCGA-67-3773-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
