Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-A7-A26F-01B-04D-A22R-05	TCGA-A7-A26F-01B-04D-A22R-05	jhu-usc.edu_BRCA.HumanMethylation450.15.lvl-3.TCGA-A7-A26F-01B-04D-A22R-05.txt	jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.6.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2013111400	BRCA-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2013111400.0.0	yes
TCGA-A7-A13G-01B-04D-A22R-05	TCGA-A7-A13G-01B-04D-A22R-05	jhu-usc.edu_BRCA.HumanMethylation450.10.lvl-3.TCGA-A7-A13G-01B-04D-A22R-05.txt	jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.6.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2013111400	BRCA-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2013111400.0.0	yes
TCGA-A7-A26J-01A-11D-A27B-05	TCGA-A7-A26J-01A-11D-A27B-05	jhu-usc.edu_BRCA.HumanMethylation450.15.lvl-3.TCGA-A7-A26J-01A-11D-A27B-05.txt	jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.6.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2013111400	BRCA-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2013111400.0.0	yes
TCGA-AC-A2QH-01B-04D-A22R-05	TCGA-AC-A2QH-01B-04D-A22R-05	jhu-usc.edu_BRCA.HumanMethylation450.19.lvl-3.TCGA-AC-A2QH-01B-04D-A22R-05.txt	jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.6.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2013111400	BRCA-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2013111400.0.0	yes
TCGA-A7-A26E-01A-11D-A27B-05	TCGA-A7-A26E-01A-11D-A27B-05	jhu-usc.edu_BRCA.HumanMethylation450.15.lvl-3.TCGA-A7-A26E-01A-11D-A27B-05.txt	jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.6.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2013111400	BRCA-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2013111400.0.0	yes
TCGA-AC-A3OD-01B-06D-A22R-05	TCGA-AC-A3OD-01B-06D-A22R-05	jhu-usc.edu_BRCA.HumanMethylation450.22.lvl-3.TCGA-AC-A3OD-01B-06D-A22R-05.txt	jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.6.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2013111400	BRCA-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2013111400.0.0	yes
