Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
CPXM1	56265	genome.wustl.edu	36	20	2726850	2726850	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	2726850	2726850	CPXM1	20	G	A	A	46
NOP2	4839	genome.wustl.edu	36	12	6545552	6545552	+	Silent	SNP	A	C	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	A	A	C	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	6545552	6545552	NOP2	12	A	C	C	7
TP53	7157	genome.wustl.edu	36	17	7518264	7518264	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7518264	7518264	TP53	17	G	A	A	39
ALOX15B	247	genome.wustl.edu	36	17	7889617	7889617	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7889617	7889617	ALOX15B	17	C	T	T	26
P2RY11	5032	genome.wustl.edu	36	19	10085364	10085364	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	10085364	10085364	P2RY11	19	G	G	C	44
PRAMEF12	390999	genome.wustl.edu	36	1	12759868	12759868	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	12759868	12759868	PRAMEF12	1	C	C	A	20
CELA2A	63036	genome.wustl.edu	36	1	15665172	15665172	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	15665172	15665172	CELA2A	1	C	C	T	27
CUBN	8029	genome.wustl.edu	36	10	17020969	17020969	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17020969	17020969	CUBN	10	C	C	G	24
ADAMTSL1	92949	genome.wustl.edu	36	9	18612344	18612344	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	18612344	18612344	ADAMTSL1	9	A	A	C	1
ENSG00000181984	0	genome.wustl.edu	36	15	19037934	19037934	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	19037934	19037934	ENSG00000181984	15	G	A	A	46
TNRC6A	27327	genome.wustl.edu	36	16	24710529	24710530	+	Missense	DNP	GG	GG	TT	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	GG	GG	GG	TT	GG	GG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	24710529	24710530	TNRC6A	16	GG	GG	TT	47
HIST1H3B	8358	genome.wustl.edu	36	6	26140117	26140117	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	26140117	26140117	HIST1H3B	6	C	C	G	31
DSC2	1824	genome.wustl.edu	36	18	26920671	26920671	+	Nonsense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	26920671	26920671	DSC2	18	T	T	A	63
LNX2	222484	genome.wustl.edu	36	13	27053767	27053767	+	Missense_Mutation	SNP	T	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	A	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27053767	27053767	LNX2	13	T	A	A	62
KRTAP13-3	337960	genome.wustl.edu	36	21	30719843	30719843	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	30719843	30719843	KRTAP13-3	21	T	T	G	51
IQCC	55721	genome.wustl.edu	36	1	32444411	32444411	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	32444411	32444411	IQCC	1	C	C	G	19
SYNGAP1	8831	genome.wustl.edu	36	6	33518684	33518684	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	33518684	33518684	SYNGAP1	6	A	A	T	1
ATP5O	539	genome.wustl.edu	36	21	34206471	34206471	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	34206471	34206471	ATP5O	21	T	T	C	54
C6orf106	64771	genome.wustl.edu	36	6	34682583	34682583	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	34682583	34682583	C6orf106	6	C	C	A	23
UHRF1BP1	54887	genome.wustl.edu	36	6	34934072	34934072	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	34934072	34934072	UHRF1BP1	6	T	T	A	60
ERG	2078	genome.wustl.edu	36	21	38677670	38677670	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38677670	38677670	ERG	21	G	G	A	37
ELL3	80237	genome.wustl.edu	36	15	41853752	41853752	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	41853752	41853752	ELL3	15	G	A	A	39
ADAMTS20	80070	genome.wustl.edu	36	12	42132705	42132705	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	42132705	42132705	ADAMTS20	12	A	A	G	7
FCGBP	8857	genome.wustl.edu	36	19	45046321	45046321	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	45046321	45046321	FCGBP	19	C	C	T	19
GABPB1	2553	genome.wustl.edu	36	15	48383548	48383549	+	Missense	DNP	AC	TA	TA	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	AC	AC	TA	TA	AC	AC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense	DNP	48383548	48383549	GABPB1	15	AC	TA	TA	6
KRT6A	3853	genome.wustl.edu	36	12	51173148	51173148	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	51173148	51173148	KRT6A	12	G	G	C	33
MAMSTR	284358	genome.wustl.edu	36	19	53908385	53908385	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53908385	53908385	MAMSTR	19	G	G	A	33
C6orf142	90523	genome.wustl.edu	36	6	54203568	54203568	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	54203568	54203568	C6orf142	6	C	C	T	29
C17orf71	55181	genome.wustl.edu	36	17	54643302	54643302	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	54643302	54643302	C17orf71	17	C	C	T	26
EXOC5	10640	genome.wustl.edu	36	14	56768188	56768188	+	Splice_Site_SNP	SNP	T	T	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	56768188	56768188	EXOC5	14	T	T	C	56
PXK	54899	genome.wustl.edu	36	3	58343280	58343280	+	Splice_Site_SNP	SNP	G	G	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	58343280	58343280	PXK	3	G	G	T	33
ETAA1	54465	genome.wustl.edu	36	2	67485182	67485182	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67485182	67485182	ETAA1	2	C	C	G	29
C4orf35	85438	genome.wustl.edu	36	4	71236407	71236407	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	71236407	71236407	C4orf35	4	G	G	C	33
ELN	2006	genome.wustl.edu	36	7	73112446	73112446	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	73112446	73112446	ELN	7	G	G	A	34
RNF213	57674	genome.wustl.edu	36	17	75964249	75964249	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	75964249	75964249	RNF213	17	T	T	A	54
MAGI2	9863	genome.wustl.edu	36	7	77723362	77723362	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	77723362	77723362	MAGI2	7	C	C	G	22
ZFHX4	79776	genome.wustl.edu	36	8	77926296	77926296	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	77926296	77926296	ZFHX4	8	T	T	A	52
DLG5	9231	genome.wustl.edu	36	10	79246325	79246325	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	79246325	79246325	DLG5	10	T	T	G	54
ENSG00000204562		genome.wustl.edu	36	9	83722276	83722276	+	Missense_Mutation	SNP	T	G	G	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	G	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	83722276	83722276	ENSG00000204562	9	T	G	G	55
PSKH2	85481	genome.wustl.edu	36	8	87145407	87145407	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	87145407	87145407	PSKH2	8	G	G	T	48
HERC5	51191	genome.wustl.edu	36	4	89626399	89626399	+	Silent	SNP	T	C	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	C	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	89626399	89626399	HERC5	4	T	C	C	55
CDH17	1015	genome.wustl.edu	36	8	95241470	95241470	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	95241470	95241470	CDH17	8	T	T	C	61
AHNAK2	113146	genome.wustl.edu	36	14	104482768	104482768	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	104482768	104482768	AHNAK2	14	G	G	T	44
DPYS	1807	genome.wustl.edu	36	8	105528874	105528874	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	105528874	105528874	DPYS	8	T	T	C	61
LAMB1	3912	genome.wustl.edu	36	7	107379875	107379875	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	107379875	107379875	LAMB1	7	G	G	T	46
ALPK1	80216	genome.wustl.edu	36	4	113571611	113571611	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	113571611	113571611	ALPK1	4	G	A	A	35
FLI1	2313	genome.wustl.edu	36	11	128185583	128185583	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	128185583	128185583	FLI1	11	G	G	A	48
OC90	729330	genome.wustl.edu	36	8	133114486	133114486	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	133114486	133114486	OC90	8	C	C	A	29
GPR112	139378	genome.wustl.edu	36	X	135255177	135255177	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	135255177	135255177	GPR112	23	C	T	T	31
DENND2A	27147	genome.wustl.edu	36	7	139890930	139890930	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	139890930	139890930	DENND2A	7	G	G	T	35
PCDHB9	56127	genome.wustl.edu	36	5	140547554	140547554	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	140547554	140547554	PCDHB9	5	C	C	A	30
ATP10B	23120	genome.wustl.edu	36	5	159980215	159980215	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	159980215	159980215	ATP10B	5	G	A	A	47
LAMC1	3915	genome.wustl.edu	36	1	181360492	181360492	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	181360492	181360492	LAMC1	1	T	T	A	50
MTNR1A	4543	genome.wustl.edu	36	4	187692302	187692302	+	Missense_Mutation	SNP	G	T	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	187692302	187692302	MTNR1A	4	G	T	T	41
PAK2	5062	genome.wustl.edu	36	3	197993936	197993936	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	197993936	197993936	PAK2	3	G	G	A	41
PLD5	200150	genome.wustl.edu	36	1	240354478	240354478	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	240354478	240354478	PLD5	1	C	C	A	21
SLC12A3	6559	genome.wustl.edu	36	16	55471577	55471577	+	Missense_Mutation	SNP	G	T	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55471577	55471577	SLC12A3	16	G	T	T	42
ZFHX3	463	genome.wustl.edu	36	16	71379382	71379382	+	Missense_Mutation	SNP	A	T	T	novel	Unknown	TCGA-04-1336-01	TCGA-04-1336-11	A	A	T	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	71379382	71379382	ZFHX3	16	A	T	T	10
KIFC2	90990	genome.wustl.edu	36	8	145663461	145663461	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	A	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	145663461	145663461	KIFC2	8	G	G	A	34
ASTN1	460	genome.wustl.edu	36	1	175181690	175181705	+	Frame_Shift_Del	DEL	TGTTCCTTTCAGCACC	TGTTCCTTTCAGCACC	-		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	TGTTCCTTTCAGCACC	TGTTCCTTTCAGCACC	TGTTCCTTTCAGCACC	-	TGTTCCTTTCAGCACC	TGTTCCTTTCAGCACC	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	175181690	175181705	ASTN1	1	TGTTCCTTTCAGCACC	TGTTCCTTTCAGCACC	-	51
SFPQ	6421	genome.wustl.edu	36	1	35427386	35427394	+	In_Frame_Del	DEL	GATTTGCCT	GATTTGCCT	-		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	GATTTGCCT	GATTTGCCT	GATTTGCCT	-	GATTTGCCT	GATTTGCCT	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	35427386	35427394	SFPQ	1	GATTTGCCT	GATTTGCCT	-	33
SLC1A2	6506	genome.wustl.edu	36	11	35265049	35265055	+	Frame_Shift_Del	DEL	GAAAGGT	GAAAGGT	-		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	GAAAGGT	GAAAGGT	GAAAGGT	-	GAAAGGT	GAAAGGT	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	35265049	35265055	SLC1A2	11	GAAAGGT	GAAAGGT	-	37
SHROOM3	57619	genome.wustl.edu	36	4	77880205	77880214	+	Frame_Shift_Del	DEL	TCTTCCAGGC	TCTTCCAGGC	-		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	TCTTCCAGGC	TCTTCCAGGC	TCTTCCAGGC	-	TCTTCCAGGC	TCTTCCAGGC	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	77880205	77880214	SHROOM3	4	TCTTCCAGGC	TCTTCCAGGC	-	50
CSMD1	64478	genome.wustl.edu	36	8	2863527	2863531	+	Frame_Shift_Del	DEL	CGTTC	CGTTC	-		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	CGTTC	CGTTC	CGTTC	-	CGTTC	CGTTC	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	2863527	2863531	CSMD1	8	CGTTC	CGTTC	-	19
MYO19	80179	genome.wustl.edu	36	17	31957639	31957639	+	Silent	SNP	C	C	A		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	C	C	C	A	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	31957639	31957639	MYO19	17	C	C	A	29
MYT1	4661	genome.wustl.edu	36	20	62342189	62342189	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-04-1336-01	TCGA-04-1336-11	G	G	G	C	G	G	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62342189	62342189	MYT1	20	G	G	C	41
