Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
LRRC40	55631	broad.mit.edu	36	1	70423164	70423164	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	70423164	70423164	LRRC40	1	G	G	C	41
KCND3	3752	broad.mit.edu	36	1	112325794	112325794	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	112325794	112325794	KCND3	1	A	A	G	14
KCTD3	51133	broad.mit.edu	36	1	213851829	213851829	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	213851829	213851829	KCTD3	1	A	A	G	7
LYST	1130	broad.mit.edu	36	1	233907505	233907505	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	233907505	233907505	LYST	1	T	T	C	49
LARP4B	23185	broad.mit.edu	36	10	861158	861158	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	861158	861158	LARP4B	10	C	C	T	31
HELLS	3070	broad.mit.edu	36	10	96331226	96331226	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	96331226	96331226	HELLS	10	T	T	C	52
PPFIBP2	8495	broad.mit.edu	36	11	7627461	7627461	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	7627461	7627461	PPFIBP2	11	G	G	C	35
OR5F1	338674	broad.mit.edu	36	11	55518467	55518467	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	55518467	55518467	OR5F1	11	C	C	G	19
ANO2	57101	broad.mit.edu	36	12	5579037	5579037	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	5579037	5579037	ANO2	12	G	G	A	37
ATF1	466	broad.mit.edu	36	12	49499695	49499695	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	49499695	49499695	ATF1	12	C	C	G	31
KRT78	196374	broad.mit.edu	36	12	51528647	51528647	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	51528647	51528647	KRT78	12	G	G	A	44
ALX1	8092	broad.mit.edu	36	12	84204851	84204851	+	Nonsense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	84204851	84204851	ALX1	12	T	T	A	51
MYBPC1	4604	broad.mit.edu	36	12	100567277	100567277	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	100567277	100567277	MYBPC1	12	T	T	C	55
CATSPERB	79820	broad.mit.edu	36	14	91172645	91172645	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	91172645	91172645	CATSPERB	14	G	G	C	42
SCAPER	49855	broad.mit.edu	36	15	74884026	74884026	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	74884026	74884026	SCAPER	15	C	C	T	18
FAM65A	79567	broad.mit.edu	36	16	66133119	66133119	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	66133119	66133119	FAM65A	16	C	C	G	18
TP53	7157	broad.mit.edu	36	17	7517577	7517577	+	Splice_Site_SNP	SNP	C	C	T	rs11575997	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	7517577	7517577	TP53	17	C	C	T	18
ENOSF1	55556	broad.mit.edu	36	18	678606	678606	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	678606	678606	ENOSF1	18	G	G	C	33
ZNF257	113835	broad.mit.edu	36	19	22063063	22063063	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	22063063	22063063	ZNF257	19	C	C	T	20
HKR1	284459	broad.mit.edu	36	19	42527429	42527429	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	42527429	42527429	HKR1	19	G	G	T	45
KCNK6	9424	broad.mit.edu	36	19	43509738	43509738	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	43509738	43509738	KCNK6	19	C	C	T	19
KIR3DL2	3812	broad.mit.edu	36	19	60069681	60069681	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	60069681	60069681	KIR3DL2	19	A	A	G	9
APOB	338	broad.mit.edu	36	2	21088990	21088990	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	21088990	21088990	APOB	2	T	T	C	59
HADHA	3030	broad.mit.edu	36	2	26277614	26277614	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	26277614	26277614	HADHA	2	C	C	G	29
SLC5A6	8884	broad.mit.edu	36	2	27277434	27277434	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	27277434	27277434	SLC5A6	2	G	G	A	47
MRPS9	64965	broad.mit.edu	36	2	105021032	105021032	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	105021032	105021032	MRPS9	2	T	T	G	56
LRP2	4036	broad.mit.edu	36	2	169776879	169776879	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	169776879	169776879	LRP2	2	G	G	C	41
FBLN2	2199	broad.mit.edu	36	3	13588029	13588029	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	13588029	13588029	FBLN2	3	A	A	G	8
ZBTB20	26137	broad.mit.edu	36	3	115552819	115552819	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	115552819	115552819	ZBTB20	3	C	C	T	20
OSBPL11	114885	broad.mit.edu	36	3	126781483	126781483	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	126781483	126781483	OSBPL11	3	C	C	A	25
PLXNA1	5361	broad.mit.edu	36	3	128218095	128218095	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	128218095	128218095	PLXNA1	3	C	C	T	26
RNF175	285533	broad.mit.edu	36	4	154856233	154856233	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	154856233	154856233	RNF175	4	C	C	T	28
IQGAP2	10788	broad.mit.edu	36	5	76006216	76006216	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	76006216	76006216	IQGAP2	5	C	C	G	17
PPIP5K2	23262	broad.mit.edu	36	5	102546985	102546985	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	102546985	102546985	PPIP5K2	5	G	G	A	36
PCDHGB3	56102	broad.mit.edu	36	5	140731825	140731825	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	140731825	140731825	PCDHGB3	5	G	G	T	38
SLIT3	6586	broad.mit.edu	36	5	168045305	168045305	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	168045305	168045305	SLIT3	5	C	C	T	27
SLIT3	6586	broad.mit.edu	36	5	168611032	168611032	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	168611032	168611032	SLIT3	5	G	G	T	48
BMP6	654	broad.mit.edu	36	6	7790411	7790411	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	7790411	7790411	BMP6	6	A	A	G	6
RNF8	9025	broad.mit.edu	36	6	37466509	37466509	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	37466509	37466509	RNF8	6	C	C	T	32
RBAK	57786	broad.mit.edu	36	7	5069883	5069883	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	5069883	5069883	RBAK	7	A	A	G	9
GPR141	353345	broad.mit.edu	36	7	37746965	37746965	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	37746965	37746965	GPR141	7	C	C	T	18
C7orf44	55744	broad.mit.edu	36	7	43651524	43651524	+	Splice_Site_SNP	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	43651524	43651524	C7orf44	7	C	C	G	32
FOXP2	93986	broad.mit.edu	36	7	114057248	114057248	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	114057248	114057248	FOXP2	7	G	G	A	34
GIMAP1	170575	broad.mit.edu	36	7	150048090	150048090	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	150048090	150048090	GIMAP1	7	C	C	A	30
DKK4	27121	broad.mit.edu	36	8	42350856	42350856	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	42350856	42350856	DKK4	8	A	A	G	7
TRPA1	8989	broad.mit.edu	36	8	73111130	73111130	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	73111130	73111130	TRPA1	8	A	A	G	6
KIAA1797	54914	broad.mit.edu	36	9	20913752	20913752	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	20913752	20913752	KIAA1797	9	T	T	A	55
TSTD2	158427	broad.mit.edu	36	9	99404817	99404817	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	99404817	99404817	TSTD2	9	G	G	C	47
ALG2	85365	broad.mit.edu	36	9	101020798	101020798	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	101020798	101020798	ALG2	9	C	C	A	30
ZRSR2	8233	broad.mit.edu	36	X	15751193	15751193	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	15751193	15751193	ZRSR2	23	C	C	G	25
GRIPAP1	56850	broad.mit.edu	36	X	48740838	48740838	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	48740838	48740838	GRIPAP1	23	G	G	T	48
DACH2	117154	broad.mit.edu	36	X	85881416	85881416	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	85881416	85881416	DACH2	23	C	C	A	21
WDR44	54521	broad.mit.edu	36	X	117411049	117411049	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	117411049	117411049	WDR44	23	G	G	A	38
PNMA5	114824	broad.mit.edu	36	X	151910022	151910022	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	151910022	151910022	PNMA5	23	G	G	A	33
ATP6AP1	537	broad.mit.edu	36	X	153316907	153316907	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	153316907	153316907	ATP6AP1	23	C	C	A	20
DSPP	1834	broad.mit.edu	36	4	88755481	88755482	+	In_Frame_Ins	INS	-	AGTAGTGAC	-	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Ins	INS	88755481	88755482	DSPP	4	-	AGTAGTGAC	-	49
INTS1	26173	broad.mit.edu	36	7	1491584	1491586	+	In_Frame_Del	DEL	CTC	-	CTC	novel	Unknown	TCGA-23-2072-01	TCGA-23-2072-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Del	DEL	1491584	1491586	INTS1	7	CTC	-	CTC	32
