Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1BG	1	broad.mit.edu	37	19	58864391	58864391	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1CF	29974	broad.mit.edu	37	10	52603576	52603576	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7714773	7714773	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAK1	22848	broad.mit.edu	37	2	69736519	69736519	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121755132	121755132	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA11P	79963	broad.mit.edu	37	4	421419	421419	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215823923	215823923	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215928675	215928675	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48237881	48237881	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48314899	48314899	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67113957	67113957	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67130881	67130881	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67028172	67028172	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48138053	48138053	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100493989	100493989	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100645145	100645145	+	Splice_Site	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABO	28	broad.mit.edu	37	9	136131636	136131636	+	Missense_Mutation	SNP	C	T	T	rs8176738		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABP1	26	broad.mit.edu	37	7	150553925	150553925	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB2	25841	broad.mit.edu	37	11	34184115	34184115	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109605836	109605836	+	Missense_Mutation	SNP	G	T	T	rs78715638		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89398308	89398308	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD3	64746	broad.mit.edu	37	1	226376847	226376847	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACIN1	22985	broad.mit.edu	37	14	23530581	23530581	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACIN1	22985	broad.mit.edu	37	14	23531687	23531687	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT11	26027	broad.mit.edu	37	1	55050420	55050420	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT11	26027	broad.mit.edu	37	1	55065189	55065189	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPP	55	broad.mit.edu	37	3	132075604	132075604	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70811981	70811981	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20476974	20476974	+	Missense_Mutation	SNP	C	G	G	rs13332099	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20482756	20482756	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20552210	20552210	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20563831	20563831	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20576096	20576096	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6A	86	broad.mit.edu	37	3	179291164	179291164	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL9	284382	broad.mit.edu	37	19	8808271	8808271	+	Missense_Mutation	SNP	C	A	A	rs142929347		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1	90	broad.mit.edu	37	2	158656063	158656063	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM29	11086	broad.mit.edu	37	4	175898483	175898483	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39607214	39607214	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208133	106208133	+	Splice_Site	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33751701	33751701	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77325413	77325413	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	128844829	128844829	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS1	9510	broad.mit.edu	37	21	28213287	28213287	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28296446	28296446	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS8	11095	broad.mit.edu	37	11	130276060	130276060	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK1	57143	broad.mit.edu	37	14	78397954	78397954	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK4	79934	broad.mit.edu	37	19	41206254	41206254	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK5	203054	broad.mit.edu	37	8	145617134	145617134	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123166346	123166346	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1D	146	broad.mit.edu	37	20	4202212	4202212	+	Nonsense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147744373	147744373	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86801251	86801251	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86807756	86807757	+	Missense_Mutation	DNP	TC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87531187	87531187	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100347088	100347088	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109667837	109667837	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	34998786	34998786	+	3'UTR	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129272583	129272583	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM3	150209	broad.mit.edu	37	22	21329871	21329871	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIG1	51390	broad.mit.edu	37	6	143605319	143605319	+	Nonsense_Mutation	SNP	G	T	T	rs115165047	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIRE	326	broad.mit.edu	37	21	45713743	45713743	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77987427	77987427	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK7	122481	broad.mit.edu	37	14	96912750	96912750	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C4	1109	broad.mit.edu	37	10	5246488	5246488	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101434374	101434374	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH8A1	64577	broad.mit.edu	37	6	135250221	135250221	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3730688	3730688	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73678725	73678725	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK1	80216	broad.mit.edu	37	4	113332985	113332985	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK1	80216	broad.mit.edu	37	4	113353771	113353771	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPL	249	broad.mit.edu	37	1	21902372	21902372	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CL	259173	broad.mit.edu	37	3	46723032	46723032	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85674298	85674298	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85694889	85694889	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMD1	262	broad.mit.edu	37	6	111214511	111214511	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMHR2	269	broad.mit.edu	37	12	53817785	53817785	+	Intron	SNP	G	T	T	rs68158705		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115231372	115231372	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38516428	38516428	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT1	284	broad.mit.edu	37	8	108306101	108306101	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41615424	41615424	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	62444367	62444367	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54526383	54526383	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKK1	255239	broad.mit.edu	37	11	113267990	113267990	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD10	55608	broad.mit.edu	37	13	111553080	111553080	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95646832	95646832	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD33	341405	broad.mit.edu	37	12	52282598	52282598	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197943539	197943540	+	Splice_Site	DNP	CT	TG	TG			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD56	345079	broad.mit.edu	37	4	77817998	77817998	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKZF1	55139	broad.mit.edu	37	2	220098546	220098546	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5961104	5961104	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101462132	101462132	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA3	306	broad.mit.edu	37	4	79503387	79503387	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2B1	163	broad.mit.edu	37	17	33932609	33932609	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83330737	83330737	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83358123	83358123	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42012412	42012412	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4S1	11154	broad.mit.edu	37	14	31542229	31542229	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29409379	29409379	+	3'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APC	324	broad.mit.edu	37	5	112178228	112178228	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLF	200558	broad.mit.edu	37	2	68740586	68740586	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116693692	116693692	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB48R	55911	broad.mit.edu	37	16	28509361	28509361	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21235326	21235326	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOH	350	broad.mit.edu	37	17	64208331	64208331	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL6	80830	broad.mit.edu	37	22	36055359	36055359	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL2	55198	broad.mit.edu	37	12	105601047	105601047	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP12B	653437	broad.mit.edu	37	2	241622087	241622087	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36212457	36212457	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP17	55114	broad.mit.edu	37	16	24979672	24979672	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP20	57569	broad.mit.edu	37	11	110450210	110450210	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP24	83478	broad.mit.edu	37	4	86844845	86844845	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130218845	130218845	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1807965	1807965	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1876530	1876530	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144070359	144070359	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27100358	27100358	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157222534	157222534	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157510713	157510713	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46233111	46233111	+	Splice_Site	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC4	55130	broad.mit.edu	37	10	28229771	28229771	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMCX2	9823	broad.mit.edu	37	X	100912509	100912509	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL	406	broad.mit.edu	37	11	13378644	13378644	+	Splice_Site	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARR3	407	broad.mit.edu	37	X	69489928	69489928	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSH	347527	broad.mit.edu	37	X	2947469	2947469	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131130876	131130876	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB2	51676	broad.mit.edu	37	14	94413654	94413654	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMT	438	broad.mit.edu	37	X	1743279	1743279	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNA1	439	broad.mit.edu	37	19	12858683	12858684	+	Intron	INS	-	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176983744	176983744	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119488128	119488128	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119625959	119625959	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	24095155	24095155	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6B	1388	broad.mit.edu	37	6	32085191	32085191	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2A	23130	broad.mit.edu	37	11	64667917	64667917	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47517714	47517714	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47517786	47517786	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47556860	47556860	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47559954	47559954	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138850587	138850587	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25266922	25266922	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25283721	25283721	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B1	481	broad.mit.edu	37	1	169080727	169080727	+	RNA	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28890516	28890516	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A3	489	broad.mit.edu	37	17	3853733	3853733	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10443668	10443668	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152818574	152818574	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36051704	36051704	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP2	10159	broad.mit.edu	37	X	40464916	40464916	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42588329	42588329	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50346457	50346457	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76889201	76889201	+	Splice_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76953071	76953071	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN2	6311	broad.mit.edu	37	12	111957619	111957619	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR2	554	broad.mit.edu	37	X	153170406	153170406	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXL	558	broad.mit.edu	37	19	41745506	41745506	+	Intron	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG3	9531	broad.mit.edu	37	10	121431949	121431950	+	Missense_Mutation	DNP	GA	AG	AG			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11058127	11058127	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143599407	143599407	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70037889	70037889	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70065732	70065732	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160194283	160194283	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33186083	33186083	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129147051	129147051	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129148882	129148882	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23606329	23606329	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDNFOS	497258	broad.mit.edu	37	11	27603383	27603383	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51696810	51696810	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC2	329	broad.mit.edu	37	11	102239004	102239004	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32613998	32613998	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15554498	15554498	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31627309	31627309	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220232157	220232157	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32937491	32937491	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32944776	32944776	+	Intron	SNP	G	T	T	rs142947698	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD1	23774	broad.mit.edu	37	22	50197939	50197939	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD2	6046	broad.mit.edu	37	6	32948002	32948002	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD7	29117	broad.mit.edu	37	16	50356035	50356035	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF2	55290	broad.mit.edu	37	8	37704277	37704277	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRS3	680	broad.mit.edu	37	X	135570363	135570363	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79990717	79990717	+	Intron	DEL	T	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180338529	180338529	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180375420	180375420	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180377625	180377625	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56381772	56381772	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf107	219621	broad.mit.edu	37	10	63519962	63519962	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf96	374355	broad.mit.edu	37	10	118116963	118116963	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf94	143678	broad.mit.edu	37	11	45928102	45928102	+	3'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112720875	112720875	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf66	144577	broad.mit.edu	37	12	64609388	64609388	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923730	24923730	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf52	388115	broad.mit.edu	37	15	40630864	40630864	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf62	57020	broad.mit.edu	37	16	19567085	19567085	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf68	80169	broad.mit.edu	37	17	8135134	8135134	+	Splice_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179504205	179504205	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf146	388649	broad.mit.edu	37	1	92694937	92694937	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247737285	247737285	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf38	9473	broad.mit.edu	37	1	28203094	28203094	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf49	84066	broad.mit.edu	37	1	178482181	178482181	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf103	24141	broad.mit.edu	37	20	9498890	9498890	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf70	140683	broad.mit.edu	37	20	31763459	31763459	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf96	140680	broad.mit.edu	37	20	264795	264795	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf45	54069	broad.mit.edu	37	21	33651133	33651133	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf13	83606	broad.mit.edu	37	22	24939994	24939994	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf51	200523	broad.mit.edu	37	2	88825284	88825284	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf73	129852	broad.mit.edu	37	2	54558174	54558175	+	Intron	INS	-	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63631145	63631145	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63631844	63631844	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf89	129293	broad.mit.edu	37	2	85049050	85049050	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf20	84077	broad.mit.edu	37	3	14799156	14799156	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf22	152065	broad.mit.edu	37	3	126270897	126270897	+	Missense_Mutation	SNP	G	T	T	rs145199781	byFrequency	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4BPA	722	broad.mit.edu	37	1	207300004	207300004	+	Intron	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf23	152992	broad.mit.edu	37	4	8467229	8467229	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf35	85438	broad.mit.edu	37	4	71200971	71200971	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31735274	31735274	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf97	80129	broad.mit.edu	37	6	151914510	151914510	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf97	80129	broad.mit.edu	37	6	151939299	151939299	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40950059	40950059	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2593983	2593983	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf46	340277	broad.mit.edu	37	7	23729051	23729051	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120704314	120704314	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf22	492307	broad.mit.edu	37	8	49987884	49987884	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf37	157657	broad.mit.edu	37	8	96259924	96259924	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27884422	27884433	+	Intron	DEL	ACCACAGCCAGG	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf41	138199	broad.mit.edu	37	9	77599774	77599774	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA3	761	broad.mit.edu	37	8	86356318	86356318	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABLES1	91768	broad.mit.edu	37	18	20774598	20774598	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140941274	140941274	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181765709	181765709	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49063081	49063081	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49063213	49063213	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1G	8913	broad.mit.edu	37	17	48694965	48694965	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1G	8913	broad.mit.edu	37	17	48695501	48695501	+	Intron	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54660586	54660586	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1949781	1949781	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM1	23705	broad.mit.edu	37	11	115049566	115049566	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86063991	86063991	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62467524	62467524	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62498519	62498519	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62535709	62535709	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71392788	71392788	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93065291	93065291	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALN1	83698	broad.mit.edu	37	7	71275385	71275385	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALR3	125972	broad.mit.edu	37	19	16590162	16590162	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKK1	84254	broad.mit.edu	37	17	3779744	3779744	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC1	55259	broad.mit.edu	37	12	25347860	25347860	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASK	8573	broad.mit.edu	37	X	41495914	41495914	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104937574	104937574	+	Intron	SNP	G	C	C	rs61891077	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP3	836	broad.mit.edu	37	4	185552920	185552920	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASS4	57091	broad.mit.edu	37	20	55012264	55012264	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN4	140689	broad.mit.edu	37	20	54578972	54578972	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219890890	219890890	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC109A	90550	broad.mit.edu	37	10	74628615	74628615	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC138	165055	broad.mit.edu	37	2	109408185	109408185	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC138	165055	broad.mit.edu	37	2	109415040	109415040	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC157	550631	broad.mit.edu	37	22	30765378	30765378	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77283255	77283255	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93687513	93687513	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43108212	43108212	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC37	348807	broad.mit.edu	37	3	126114802	126114802	+	5'UTR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC37	348807	broad.mit.edu	37	3	126132879	126132879	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96292020	96292020	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96292528	96292528	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC40	55036	broad.mit.edu	37	17	78070929	78070929	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC89	220388	broad.mit.edu	37	11	85396024	85396024	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC90A	63933	broad.mit.edu	37	6	13799214	13799214	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118753904	118753904	+	Missense_Mutation	SNP	T	A	A	rs113727191		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31116303	31116303	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKAR	886	broad.mit.edu	37	4	26483736	26483736	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6291648	6291648	+	Intron	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50089805	50089805	+	Missense_Mutation	SNP	G	T	T	rs61751434	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17072821	17072821	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17073466	17073466	+	5'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7521407	7521407	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD207	50489	broad.mit.edu	37	2	71058741	71058741	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35829249	35829249	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121822330	121822330	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149962324	149962324	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149983522	149983522	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100856434	100856434	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91980576	91980576	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65005902	65005902	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95158253	95158253	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473591	19473591	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH19	28513	broad.mit.edu	37	18	64211979	64211979	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73406454	73406454	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73468918	73468918	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH3	1001	broad.mit.edu	37	16	68720472	68720472	+	Intron	SNP	C	T	T	rs150184087	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63526277	63526277	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61823358	61823358	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85957635	85957635	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85971992	85971992	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662892	105662892	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90613561	90613561	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP3	80279	broad.mit.edu	37	17	46058411	46058411	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA1	1990	broad.mit.edu	37	12	51737560	51737560	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA3A	10136	broad.mit.edu	37	1	22333450	22333450	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA3A	10136	broad.mit.edu	37	1	22336149	22336149	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11299787	11299787	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46795763	46795763	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46931390	46931390	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104095862	104095862	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49061306	49061306	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117209310	117209310	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CETP	1071	broad.mit.edu	37	16	56997135	56997135	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR1	3078	broad.mit.edu	37	1	196796100	196796100	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196876504	196876504	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196706738	196706738	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFP	5199	broad.mit.edu	37	X	47485815	47485815	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49527197	49527197	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1B	8208	broad.mit.edu	37	21	37775236	37775236	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126449365	126449365	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146747961	146747961	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6184629	6184629	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6194357	6194357	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHODL	140578	broad.mit.edu	37	21	19629016	19629016	+	Silent	SNP	C	A	A	rs61739664	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136700192	136700192	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA4	1137	broad.mit.edu	37	20	61978290	61978290	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB1	1140	broad.mit.edu	37	17	7358600	7358600	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45671409	45671409	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45672154	45672154	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHSY3	337876	broad.mit.edu	37	5	129520233	129520233	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIAO1	9391	broad.mit.edu	37	2	96936996	96936996	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120159163	120159163	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46784048	46784048	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143028571	143028571	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIC2	1193	broad.mit.edu	37	X	154507270	154507270	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIC2	1193	broad.mit.edu	37	X	154508365	154508365	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN5	1203	broad.mit.edu	37	13	77564706	77564706	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSPN	63967	broad.mit.edu	37	1	36217085	36217085	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140265370	140265370	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMIP	80790	broad.mit.edu	37	16	81743230	81743230	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6262914	6262914	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB1	1258	broad.mit.edu	37	16	57994334	57994334	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87670049	87670049	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR1	10256	broad.mit.edu	37	1	26513790	26513790	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21534736	21534736	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21667055	21667055	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM1	26507	broad.mit.edu	37	10	101122153	101122153	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205031162	205031162	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74334493	74334493	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74411127	74411127	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74413689	74413689	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100208004	100208004	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1444003	1444003	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147674913	147674913	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147844493	147844493	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125261947	125261947	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125281974	125281974	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125504773	125504773	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7836274	7836274	+	5'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG1	9382	broad.mit.edu	37	17	71204463	71204464	+	Frame_Shift_Ins	INS	-	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103343713	103343713	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103412437	103412437	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103544219	103544219	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101788185	101788185	+	Splice_Site	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48272811	48272811	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94024365	94024365	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139606332	139606332	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139833475	139833475	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109895542	109895542	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	110223216	110223216	+	5'UTR	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130188091	130188091	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189868286	189868286	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189868867	189868867	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A3	1285	broad.mit.edu	37	2	228119376	228119376	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107911660	107911660	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107402931	107402931	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107417735	107417735	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137677868	137677868	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137694688	137694688	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189917528	189917528	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10091370	10091370	+	Splice_Site	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238287867	238287867	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130290119	130290119	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130361590	130361590	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC10	10584	broad.mit.edu	37	8	120118127	120118127	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	346494	346494	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261322	160261322	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG	22820	broad.mit.edu	37	3	128993975	128993975	+	Intron	SNP	G	T	T	rs112616452		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47746352	47746352	+	Intron	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130025175	130025175	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA3	1359	broad.mit.edu	37	3	148614351	148614351	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPD	1362	broad.mit.edu	37	17	28772927	28772927	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83222809	83222809	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211473345	211473345	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125558511	125558511	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197325897	197325897	+	Intron	SNP	T	C	C	rs148281370	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137612987	137612987	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREG2	200407	broad.mit.edu	37	2	101967402	101967402	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43906640	43906640	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36669769	36669769	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF2	64109	broad.mit.edu	37	X	1321261	1321262	+	Intron	DNP	GC	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROCCL1	84809	broad.mit.edu	37	1	16945464	16945464	+	RNA	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRX	1406	broad.mit.edu	37	19	48343139	48343139	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB1	1414	broad.mit.edu	37	22	27007955	27007955	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RB	1439	broad.mit.edu	37	22	37334596	37334596	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2824066	2824066	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3062958	3062958	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3443692	3443692	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3565937	3565937	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113308008	113308008	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113326281	113326281	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113516078	113516078	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113563004	113563004	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113585692	113585692	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113694868	113694868	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68024301	68024301	+	Splice_Site	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56087660	56087660	+	Nonsense_Mutation	SNP	A	T	T	rs150326376		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDSP2	10106	broad.mit.edu	37	12	58220094	58220094	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA1	1495	broad.mit.edu	37	5	138148112	138148112	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11384964	11384964	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117385855	117385855	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117431569	117431569	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16957942	16957942	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17152917	17152917	+	Splice_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111748370	111748370	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107219763	107219763	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	36004214	36004214	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf36	79742	broad.mit.edu	37	X	45023392	45023392	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5RL	606495	broad.mit.edu	37	1	54653293	54653293	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37653016	37653016	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP2	26999	broad.mit.edu	37	5	156751011	156751011	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26A1	1592	broad.mit.edu	37	10	94835797	94835797	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41454958	41454958	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41522649	41522649	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A5	1577	broad.mit.edu	37	7	99260406	99260406	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTL1	54360	broad.mit.edu	37	4	5016865	5016865	+	3'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4	10926	broad.mit.edu	37	7	87514491	87514491	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBH	1621	broad.mit.edu	37	9	136509332	136509333	+	Intron	DNP	CC	AT	AT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBNL	28988	broad.mit.edu	37	7	44096482	44096482	+	Missense_Mutation	SNP	G	T	T	rs61735009	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50432650	50432650	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	51025665	51025666	+	Splice_Site	DNP	CA	AG	AG			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6651268	6651268	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCP1A	55802	broad.mit.edu	37	3	53321478	53321478	+	3'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95095718	95095718	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCXR	51181	broad.mit.edu	37	17	79994492	79994492	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDAH2	23564	broad.mit.edu	37	6	31696949	31696949	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103907539	103907539	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX26B	203522	broad.mit.edu	37	X	134680837	134680837	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX4	54514	broad.mit.edu	37	5	55034874	55034874	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX6	1656	broad.mit.edu	37	11	118636162	118636162	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB115	245929	broad.mit.edu	37	20	29845623	29845623	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB116	245930	broad.mit.edu	37	20	29891335	29891335	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29976907	29976907	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB136	613210	broad.mit.edu	37	8	11832107	11832107	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126202795	126202795	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142176321	142176321	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR14	8220	broad.mit.edu	37	22	19130301	19130301	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137266530	137266530	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137363342	137363342	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55317863	55317863	+	3'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12110964	12110964	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12131102	12131102	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX29	54505	broad.mit.edu	37	5	54567931	54567931	+	Nonsense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX30	22907	broad.mit.edu	37	3	47870539	47870539	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60582640	60582640	+	Intron	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61512318	61512318	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	394829	394829	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	402355	402355	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC1	116093	broad.mit.edu	37	2	189599535	189599535	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13072130	13072130	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83500978	83500978	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG4	1742	broad.mit.edu	37	17	7095232	7095232	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG4	1742	broad.mit.edu	37	17	7095235	7095235	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79603414	79603414	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3845282	3845282	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35128633	35128633	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLK1	8788	broad.mit.edu	37	14	101201093	101201093	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX1	1745	broad.mit.edu	37	2	172952919	172952919	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124328259	124328259	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32591656	32591656	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32591898	32591898	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT3	58524	broad.mit.edu	37	9	977258	977258	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124268652	124268652	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21789180	21789180	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52432999	52432999	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13770853	13770853	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38816346	38816346	+	Intron	SNP	C	G	G	rs114063428	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38835952	38835952	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11543762	11543762	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11865393	11865393	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72278172	72278172	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183586760	183586760	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC27	51277	broad.mit.edu	37	2	25190085	25190085	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC5B	85479	broad.mit.edu	37	8	66963823	66963823	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31383029	31383029	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31389238	31389238	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117783111	117783111	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128824628	128824628	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK5	55816	broad.mit.edu	37	20	53259952	53259952	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67344839	67344839	+	Intron	SNP	G	A	A	rs34692731		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162864962	162864962	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162895493	162895493	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154143394	154143394	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154684101	154684101	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP9	91039	broad.mit.edu	37	19	4688944	4688944	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100510265	100510265	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	42080435	42080435	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29111028	29111028	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSN1	79980	broad.mit.edu	37	20	35390863	35390863	+	Splice_Site	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSPP	1834	broad.mit.edu	37	4	88533716	88533716	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7559414	7559414	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56354521	56354521	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56473996	56473996	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32407638	32407638	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNB	1838	broad.mit.edu	37	2	25656748	25656748	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX1	1840	broad.mit.edu	37	12	113533229	113533229	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL2	1856	broad.mit.edu	37	17	7133798	7133798	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102505914	102505914	+	Intron	SNP	G	T	T	rs17541512		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95439665	95439665	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4700362	4700362	+	Missense_Mutation	SNP	C	A	A	rs111557443		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131757179	131757179	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBPL	84650	broad.mit.edu	37	13	50244093	50244093	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBP	10682	broad.mit.edu	37	X	48385706	48385706	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM2	1842	broad.mit.edu	37	9	95263280	95263280	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA	1896	broad.mit.edu	37	X	68836384	68836384	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM3	80267	broad.mit.edu	37	1	184688541	184688541	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83360489	83360489	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRB	1910	broad.mit.edu	37	13	78477257	78477257	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38338879	38338879	+	Missense_Mutation	SNP	C	A	A	rs74624102	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD3	30845	broad.mit.edu	37	2	31484546	31484546	+	Silent	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3B	8662	broad.mit.edu	37	7	2409324	2409324	+	Intron	SNP	A	G	G	rs112295665		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3IP1	442720	broad.mit.edu	37	7	109599583	109599583	+	3'UTR	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184049277	184049277	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G2	1982	broad.mit.edu	37	11	10820818	10820818	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2847926	2847926	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42509828	42509828	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42510128	42510128	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMX2	2018	broad.mit.edu	37	10	119305306	119305307	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77075478	77075478	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOSF1	55556	broad.mit.edu	37	18	677487	677487	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX2	10495	broad.mit.edu	37	X	129837135	129837135	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132179897	132179897	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPAS1	2034	broad.mit.edu	37	2	46574200	46574200	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131179131	131179131	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131188787	131188787	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131247753	131247753	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5406687	5406687	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5410547	5410547	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA2	1969	broad.mit.edu	37	1	16464386	16464386	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22921714	22921714	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPN1	29924	broad.mit.edu	37	19	56206432	56206432	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212248511	212248511	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212530091	212530091	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128046468	128046468	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPNL	339768	broad.mit.edu	37	2	239040155	239040155	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESX1	80712	broad.mit.edu	37	X	103498743	103498743	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	12037475	12037475	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3	11336	broad.mit.edu	37	5	457103	457103	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45700901	45700901	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66063473	66063473	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH1	2145	broad.mit.edu	37	17	40872313	40872313	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148508784	148508784	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14709584	14709584	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM10A4	145165	broad.mit.edu	37	13	50747385	50747385	+	3'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A2	10827	broad.mit.edu	37	5	153407640	153407640	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170627610	170627610	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170657231	170657231	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126A	84668	broad.mit.edu	37	7	22999980	22999980	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17641504	17641504	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM150B	285016	broad.mit.edu	37	2	286093	286093	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169B	283777	broad.mit.edu	37	15	98995130	98995130	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM173B	134145	broad.mit.edu	37	5	10227695	10227695	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM186A	121006	broad.mit.edu	37	12	50759534	50759534	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM18B2	201158	broad.mit.edu	37	17	15406305	15406305	+	Missense_Mutation	SNP	T	G	G	rs141163711		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91549444	91549444	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A2	338811	broad.mit.edu	37	12	62148859	62148860	+	Intron	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM24A	118670	broad.mit.edu	37	10	124672365	124672365	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21825634	21825634	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34150342	34150342	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34960895	34960895	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34961712	34961712	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028757	37028757	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B1	100130302	broad.mit.edu	37	X	24381860	24381860	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM59A	64762	broad.mit.edu	37	18	29867399	29867399	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250308	177250308	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067568	190067568	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65A	79567	broad.mit.edu	37	16	67575279	67575279	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	11991484	11991484	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627176	43627176	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43632958	43632958	+	5'Flank	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM81B	153643	broad.mit.edu	37	5	94727409	94727409	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83A	84985	broad.mit.edu	37	8	124206450	124206450	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASLG	356	broad.mit.edu	37	1	172628724	172628724	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD5	60493	broad.mit.edu	37	20	3127960	3127960	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD5	60493	broad.mit.edu	37	20	3129681	3129681	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92616381	92616381	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126336650	126336650	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126369620	126369620	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126370085	126370085	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126373104	126373104	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127648464	127648464	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127712525	127712525	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15616169	15616169	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO38	81545	broad.mit.edu	37	5	147790184	147790184	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO8	26269	broad.mit.edu	37	4	175160386	175160386	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1A	2205	broad.mit.edu	37	1	159277583	159277583	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125023115	125023115	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF2	2247	broad.mit.edu	37	4	123748592	123748592	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF3	2248	broad.mit.edu	37	11	69631260	69631260	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP3	2287	broad.mit.edu	37	14	45603705	45603705	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP5	2289	broad.mit.edu	37	6	35588009	35588009	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLAD1	80308	broad.mit.edu	37	1	154962050	154962050	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ35220	284131	broad.mit.edu	37	17	78398799	78398799	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84531175	84531175	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84609573	84609573	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128471053	128471053	+	Intron	SNP	G	T	T	rs79489893	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28877397	28877397	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306875	240306875	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO4	2329	broad.mit.edu	37	1	171306562	171306562	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147011477	147011477	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	172065095	172065095	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	172065099	172065099	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR4	390243	broad.mit.edu	37	11	94040669	94040669	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXA3	3171	broad.mit.edu	37	19	46367796	46367796	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPGS	2356	broad.mit.edu	37	9	130569352	130569352	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79399131	79399131	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29631687	29631687	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52187182	52187182	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49448328	49448328	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48516978	48516978	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32783010	32783010	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1L	83856	broad.mit.edu	37	9	108286342	108286342	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD2	123722	broad.mit.edu	37	15	83447708	83447708	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49189750	49189750	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FST	10468	broad.mit.edu	37	5	52781807	52781807	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	53878268	53878268	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD4	53828	broad.mit.edu	37	10	43871404	43871404	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB1	2549	broad.mit.edu	37	4	144346366	144346366	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46252268	46252268	+	3'UTR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46252334	46252334	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB2	2561	broad.mit.edu	37	5	160837925	160837925	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26812800	26812800	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161522616	161522616	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRP	2568	broad.mit.edu	37	5	170235647	170235647	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171675254	171675254	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158142619	158142619	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174169425	174169425	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151704840	151704840	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62402222	62402222	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101016049	101016049	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA4	2626	broad.mit.edu	37	8	11616067	11616067	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATS	352954	broad.mit.edu	37	7	99816180	99816180	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATS	352954	broad.mit.edu	37	7	99821629	99821629	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22749027	22749027	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP6	163351	broad.mit.edu	37	1	89847391	89847391	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX2	2637	broad.mit.edu	37	2	237075176	237075176	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109067569	109067569	+	Splice_Site	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34117882	34117882	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34131591	34131591	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44186232	44186232	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM1	8521	broad.mit.edu	37	6	52996762	52996762	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF6	392255	broad.mit.edu	37	8	97156857	97156857	+	Missense_Mutation	SNP	G	T	T	rs138730867	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDI1	2664	broad.mit.edu	37	X	153667261	153667261	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFI1B	8328	broad.mit.edu	37	9	135864468	135864468	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH1	2688	broad.mit.edu	37	17	61995506	61995506	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHDC	84514	broad.mit.edu	37	17	40342359	40342359	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA1	2697	broad.mit.edu	37	6	121769099	121769099	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK2	2712	broad.mit.edu	37	4	80328582	80328582	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57864471	57864471	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9765242	9765242	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD2	2747	broad.mit.edu	37	X	120181573	120181573	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMCL1	64395	broad.mit.edu	37	2	70096905	70096905	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAI2	2771	broad.mit.edu	37	3	50289056	50289056	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAI3	2773	broad.mit.edu	37	1	110134684	110134684	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAI3	2773	broad.mit.edu	37	1	110134687	110134687	+	Silent	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57485075	57485075	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG2	54331	broad.mit.edu	37	14	52433353	52433353	+	Missense_Mutation	SNP	C	T	T	rs139067662	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231406910	231406910	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132473343	132473343	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132548911	132548911	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	93518679	93518679	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD2	2820	broad.mit.edu	37	2	157332584	157332584	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD2	2820	broad.mit.edu	37	2	157426037	157426037	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135443691	135443691	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR142	350383	broad.mit.edu	37	17	72368433	72368433	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR156	165829	broad.mit.edu	37	3	119887271	119887271	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR156	165829	broad.mit.edu	37	3	119900182	119900182	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25886831	25886831	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR52	9293	broad.mit.edu	37	1	174417343	174417343	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19031889	19031889	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR78	27201	broad.mit.edu	37	4	8583019	8583019	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR78	27201	broad.mit.edu	37	4	8589163	8589163	+	3'UTR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123468920	123468920	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREM1	26585	broad.mit.edu	37	15	33023301	33023301	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122318470	122318470	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122319874	122319874	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87379584	87379584	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87966366	87966366	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2D	2906	broad.mit.edu	37	19	48919404	48919404	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66962663	66962663	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121203194	121203194	+	Missense_Mutation	SNP	G	T	T	rs143962659	byFrequency	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRXCR1	389207	broad.mit.edu	37	4	42895638	42895638	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27503586	27503586	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27544624	27544624	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C3	9330	broad.mit.edu	37	2	197629201	197629201	+	3'UTR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP4	23560	broad.mit.edu	37	10	1060341	1060341	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP5	26164	broad.mit.edu	37	20	60774021	60774021	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1A	2978	broad.mit.edu	37	6	42145853	42145853	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108625421	108625421	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108631642	108631642	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108635391	108635391	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108684682	108684682	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108691261	108691261	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBP1	728411	broad.mit.edu	37	5	21459655	21459655	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBP1	728411	broad.mit.edu	37	5	21459682	21459682	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HABP2	3026	broad.mit.edu	37	10	115345513	115345513	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBB	3043	broad.mit.edu	37	11	5246896	5246896	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5593311	5593311	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBS1L	10767	broad.mit.edu	37	6	135363117	135363117	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153220719	153220719	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC6	10013	broad.mit.edu	37	X	48663850	48663850	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18868971	18868971	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR2	54919	broad.mit.edu	37	7	769535	769535	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31778439	31778439	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31605941	31605941	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31605945	31605945	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197298149	197298149	+	5'UTR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65413471	65413471	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65428009	65428009	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPN1	641654	broad.mit.edu	37	11	124789651	124789651	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERPUD2	64224	broad.mit.edu	37	7	35733802	35733802	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFE	3077	broad.mit.edu	37	6	26087764	26087764	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF3A	64344	broad.mit.edu	37	19	46815635	46815635	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12120112	12120112	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234746241	234746242	+	Frame_Shift_Ins	INS	-	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71010259	71010259	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLCS	3141	broad.mit.edu	37	21	38308736	38308736	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186113529	186113529	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGN5	79366	broad.mit.edu	37	X	80374026	80374026	+	Intron	SNP	C	T	T	rs7053255		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGN5	79366	broad.mit.edu	37	X	80377161	80377161	+	5'UTR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	43034844	43034844	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB5	3215	broad.mit.edu	37	17	46671083	46671083	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPD	3242	broad.mit.edu	37	12	122284813	122284813	+	Silent	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100503533	100503533	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS5	117245	broad.mit.edu	37	11	63233573	63233573	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRG	3273	broad.mit.edu	37	3	186384029	186384029	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148802058	148802058	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA13	6782	broad.mit.edu	37	21	15753637	15753637	+	Missense_Mutation	SNP	C	A	A	rs140867763		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA1L	3305	broad.mit.edu	37	6	31777646	31777646	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB7	27129	broad.mit.edu	37	1	16343786	16343786	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1E	3354	broad.mit.edu	37	6	87726233	87726233	+	3'UTR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA3	94031	broad.mit.edu	37	4	8306035	8306035	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53588986	53588986	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	94985116	94985116	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129239079	129239079	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65702613	65702614	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99465614	99465614	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160497131	160497131	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151156246	151156246	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151162958	151162958	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151162966	151162966	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130409602	130409602	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130410904	130410904	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130415609	130415609	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117122426	117122426	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKE	9641	broad.mit.edu	37	1	206653244	206653244	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF2	22807	broad.mit.edu	37	2	213914437	213914437	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL16	3603	broad.mit.edu	37	15	81584983	81584983	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	105011394	105011394	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RB	53833	broad.mit.edu	37	3	136701172	136701172	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27455957	27455957	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27460516	27460516	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3131951	3131951	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3134157	3134157	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPA1	3612	broad.mit.edu	37	8	82586002	82586002	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100948516	100948516	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30795407	30795407	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4A	3631	broad.mit.edu	37	2	99149825	99149825	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15222397	15222397	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG2	51141	broad.mit.edu	37	2	118864650	118864650	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156812857	156812857	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO4	79711	broad.mit.edu	37	14	24655132	24655132	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCB1	9657	broad.mit.edu	37	3	121489381	121489381	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF6	3664	broad.mit.edu	37	1	209974728	209974728	+	Nonsense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISX	91464	broad.mit.edu	37	22	35478514	35478514	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68628073	68628073	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52386271	52386271	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182344887	182344887	+	Silent	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31419214	31419214	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422636	31422636	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187520885	187520885	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31368561	31368561	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31391489	31391489	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP1	9270	broad.mit.edu	37	2	9558928	9558928	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70521649	70521649	+	5'UTR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB2	3689	broad.mit.edu	37	21	46330268	46330268	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB6	3694	broad.mit.edu	37	2	161056431	161056431	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226923458	226923458	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64982042	64982042	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42788285	42788285	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124432080	124432080	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD5	131377	broad.mit.edu	37	3	42729870	42729870	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30033943	30033943	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	156009835	156009835	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC2	3747	broad.mit.edu	37	12	75434841	75434841	+	3'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119915119	119915119	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNE1L	23630	broad.mit.edu	37	X	108867952	108867952	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318872	21318872	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ4	3761	broad.mit.edu	37	22	38823948	38823948	+	Missense_Mutation	SNP	C	A	A	rs147603955	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118957067	118957067	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215256727	215256727	+	5'UTR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78649087	78649087	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ4	9132	broad.mit.edu	37	1	41304035	41304035	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD17	79734	broad.mit.edu	37	22	37455507	37455507	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103446052	103446052	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55977014	55977014	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55981334	55981335	+	Intron	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55981512	55981512	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610293	10610293	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142651477	142651477	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62407074	62407074	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26955577	26955577	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42832695	42832695	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0317	9870	broad.mit.edu	37	14	75139406	75139406	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0391	9692	broad.mit.edu	37	14	35628066	35628066	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55357547	55357547	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8783929	8783929	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5461256	5461256	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81181089	81181089	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57180084	57180084	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138584671	138584671	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1383	54627	broad.mit.edu	37	1	232943500	232943500	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226446931	226446931	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100082584	100082584	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180905361	180905361	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28119595	28119595	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10431226	10431226	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245582977	245582977	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245848767	245848767	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51900651	51900651	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57943921	57943921	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57970480	57970480	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57976868	57976868	+	Intron	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL3	115653	broad.mit.edu	37	19	55237901	55237901	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55593517	55593517	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF6	1316	broad.mit.edu	37	10	3821740	3821740	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF8	11279	broad.mit.edu	37	X	56310868	56310868	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK12	43849	broad.mit.edu	37	19	51532473	51532473	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK4	9622	broad.mit.edu	37	19	51411735	51411735	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRB1	3820	broad.mit.edu	37	12	9752258	9752258	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KL	9365	broad.mit.edu	37	13	33591005	33591005	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45741486	45741486	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPTN	11133	broad.mit.edu	37	19	47980043	47980043	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52913777	52913777	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52843562	52843563	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52818493	52818493	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-4	337971	broad.mit.edu	37	21	31869471	31869471	+	5'Flank	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP24-1	643803	broad.mit.edu	37	21	31655173	31655173	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP26-1	388818	broad.mit.edu	37	21	31691968	31691968	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-11	653240	broad.mit.edu	37	17	39274398	39274398	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-4	84616	broad.mit.edu	37	17	39316477	39316477	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153137773	153137773	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130454536	130454536	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR2	3904	broad.mit.edu	37	19	55014075	55014075	+	5'UTR	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112439054	112439054	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112493804	112493804	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL1	10314	broad.mit.edu	37	2	211301170	211301170	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAS1L	81887	broad.mit.edu	37	X	64751152	64751152	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46704866	46704866	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136569967	136569967	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHAL6A	160287	broad.mit.edu	37	11	18485532	18485532	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGMN	5641	broad.mit.edu	37	14	93172726	93172726	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71966695	71966695	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202272257	202272257	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202276590	202276590	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGTN	1939	broad.mit.edu	37	1	206765218	206765218	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHCGR	3973	broad.mit.edu	37	2	48915276	48915276	+	Nonsense_Mutation	SNP	G	A	A	rs121912524		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104377165	104377165	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38493779	38493779	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB5	10990	broad.mit.edu	37	19	54758731	54758731	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMK2	3985	broad.mit.edu	37	22	31661989	31661989	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN37	55957	broad.mit.edu	37	19	36245208	36245208	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN7C	55327	broad.mit.edu	37	11	27521133	27521133	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINS1	55180	broad.mit.edu	37	15	101112154	101112154	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90497489	90497489	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNX1	84708	broad.mit.edu	37	4	54439849	54439849	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148009941	148009941	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC388796	388796	broad.mit.edu	37	20	37053737	37053737	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644172	644172	broad.mit.edu	37	17	43678165	43678165	+	3'UTR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645166	645166	broad.mit.edu	37	1	148932887	148932887	+	RNA	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21936944	21936945	+	RNA	INS	-	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC649330	649330	broad.mit.edu	37	1	12907903	12907903	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC653544	653544	broad.mit.edu	37	4	190989661	190989661	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22764220	22764220	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160903537	160903537	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160966591	160966591	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161087439	161087439	+	5'Flank	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82188306	82188306	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62641575	62641575	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99772039	99772039	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR5	163404	broad.mit.edu	37	1	99418782	99418782	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85982287	85982287	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141093413	141093413	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141122213	141122213	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141291702	141291702	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141625409	141625409	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57572802	57572802	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57606328	57606328	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170042416	170042416	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170145683	170145683	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170145685	170145685	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16B	90668	broad.mit.edu	37	14	24538064	24538064	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC30	339291	broad.mit.edu	37	18	7231772	7231772	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC30	339291	broad.mit.edu	37	18	7231799	7231799	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC52	440699	broad.mit.edu	37	1	165532835	165532835	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70505179	70505179	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70505385	70505385	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85623409	85623409	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745528	77745528	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77748950	77748951	+	Intron	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM5	23658	broad.mit.edu	37	7	32530064	32530064	+	5'Flank	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSS	4047	broad.mit.edu	37	21	47639344	47639344	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33484662	33484662	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTF	4057	broad.mit.edu	37	3	46486725	46486725	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL6	57151	broad.mit.edu	37	17	34263665	34263665	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTFL1	54585	broad.mit.edu	37	3	45875808	45875808	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21349315	21349315	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39782811	39782811	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47345865	47345865	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148798268	148798268	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148798492	148798492	+	3'UTR	SNP	G	T	T	rs73606281	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA4	4103	broad.mit.edu	37	X	151092781	151092781	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB1	4112	broad.mit.edu	37	X	30269673	30269673	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB4	4115	broad.mit.edu	37	X	30260998	30260998	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140992888	140992888	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140994985	140994985	+	Missense_Mutation	SNP	C	A	A	rs150321883		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140996472	140996472	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140985492	140985492	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	77708175	77708175	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65270747	65270748	+	RNA	DNP	TG	AT	AT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109155851	109155851	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21208458	21208458	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K6	5608	broad.mit.edu	37	17	67521011	67521011	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210574774	210574774	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K10	4294	broad.mit.edu	37	19	40704286	40704286	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K2	10746	broad.mit.edu	37	2	128075837	128075837	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156296262	156296262	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	87028474	87028474	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK12	6300	broad.mit.edu	37	22	50695498	50695498	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK4	5596	broad.mit.edu	37	18	48255621	48255621	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPRE2	10982	broad.mit.edu	37	18	32677326	32677326	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	165110578	165110578	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	165118894	165118894	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119750073	119750073	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119750107	119750107	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63666130	63666130	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT1A	4143	broad.mit.edu	37	10	82043599	82043599	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31194360	31194360	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138699973	138699973	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100395640	100395640	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM4	4173	broad.mit.edu	37	8	48878870	48878870	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136623838	136623838	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	95001411	95001411	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47566251	47566251	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90382348	90382348	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90432663	90432663	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151073938	151073938	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70357887	70357887	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126732373	126732373	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126734443	126734443	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126771052	126771052	+	Splice_Site	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF6	1953	broad.mit.edu	37	1	3440803	3440803	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88766498	88766498	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2B	55798	broad.mit.edu	37	7	128116825	128116825	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL9	51108	broad.mit.edu	37	16	21624231	21624231	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158522150	158522150	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141750516	141750516	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99242232	99242232	+	Missense_Mutation	SNP	C	A	A	rs146487281		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4A	11320	broad.mit.edu	37	2	99342815	99342815	+	5'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4C	25834	broad.mit.edu	37	12	86383405	86383405	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74934235	74934235	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC87042	256227	broad.mit.edu	37	7	22534440	22534440	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGEA5	10724	broad.mit.edu	37	10	103572716	103572716	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST1	4257	broad.mit.edu	37	12	16510579	16510579	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18389668	18389668	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIF4GD	57409	broad.mit.edu	37	17	73262985	73262985	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIF4GD	57409	broad.mit.edu	37	17	73263869	73263869	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1244	100302285	broad.mit.edu	37	12	9392164	9392164	+	5'Flank	DEL	T	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1297	100302187	broad.mit.edu	37	13	54886166	54886166	+	RNA	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR409	574413	broad.mit.edu	37	14	101531601	101531601	+	5'Flank	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR485	574436	broad.mit.edu	37	14	101521715	101521715	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR520C	574476	broad.mit.edu	37	19	54210669	54210669	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR545	664614	broad.mit.edu	37	X	73506941	73506941	+	RNA	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR668	768214	broad.mit.edu	37	14	101521125	101521125	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49444341	49444341	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151926959	151926959	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD2	221938	broad.mit.edu	37	7	4947150	4947150	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD2	221938	broad.mit.edu	37	7	4965297	4965297	+	Intron	SNP	C	A	A	rs150120614	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD	23531	broad.mit.edu	37	17	53485075	53485075	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154802043	154802044	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP12	4321	broad.mit.edu	37	11	102738758	102738758	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP12	4321	broad.mit.edu	37	11	102745613	102745613	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP17	4326	broad.mit.edu	37	12	132329827	132329827	+	Intron	SNP	C	T	T	rs145104094	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MN1	4330	broad.mit.edu	37	22	28192956	28192956	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158812272	158812272	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON1B	22879	broad.mit.edu	37	16	77227336	77227336	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537858	174537858	+	5'Flank	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORN5	254956	broad.mit.edu	37	9	124936922	124936922	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX3	117195	broad.mit.edu	37	11	18159298	18159298	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL39	54148	broad.mit.edu	37	21	26960133	26960133	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47710185	47710185	+	3'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLNL	401827	broad.mit.edu	37	16	823010	823010	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1P2	11209	broad.mit.edu	37	1	16976538	16976538	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTCP1	4515	broad.mit.edu	37	X	154293943	154293943	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149903976	149903976	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR7	9108	broad.mit.edu	37	8	17157479	17157479	+	Silent	SNP	G	C	C	rs146319076	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1A	4543	broad.mit.edu	37	4	187454826	187454826	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11254510	11254510	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11272478	11272478	+	Missense_Mutation	SNP	T	C	C	rs151082401		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30655387	30655387	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9060278	9060278	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9072943	9072943	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100684607	100684607	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1093769	1093769	+	Missense_Mutation	SNP	G	T	T	rs41361144	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1246915	1246915	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3228004	3228004	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3240048	3240048	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3240386	3240386	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42331601	42331601	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCN	4613	broad.mit.edu	37	2	16085778	16085778	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYF6	4618	broad.mit.edu	37	12	81101537	81101537	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15813990	15813990	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10248473	10248473	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10400284	10400284	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10430338	10430338	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10433465	10433465	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10543834	10543834	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23869718	23869718	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23871845	23871845	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23874802	23874802	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23885189	23885189	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23893161	23893161	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL4	4635	broad.mit.edu	37	17	45299788	45299788	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109379843	109379843	+	Missense_Mutation	SNP	A	T	T	rs141525847	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57437614	57437615	+	Intron	DNP	GA	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	31047862	31047862	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128327353	128327353	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128339425	128339425	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128367543	128367543	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9B	4650	broad.mit.edu	37	19	17283219	17283219	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24424320	24424320	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	39942313	39942313	+	Silent	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89891409	89891409	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAIF1	203245	broad.mit.edu	37	9	130825873	130825873	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101890223	101890223	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78583961	78583961	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15628947	15628947	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35615017	35615017	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145416303	145416303	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16892056	16892056	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16915726	16915726	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19339042	19339042	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH2	29781	broad.mit.edu	37	22	50957720	50957720	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124824595	124824595	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124841197	124841197	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR1	9437	broad.mit.edu	37	19	55417619	55417619	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152432208	152432208	+	Splice_Site	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152553805	152553805	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB1	64168	broad.mit.edu	37	8	91963412	91963412	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84035365	84035365	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56142806	56142807	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK5	341676	broad.mit.edu	37	13	52676018	52676018	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45000903	45000903	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73564825	73564825	+	Missense_Mutation	SNP	G	T	T	rs148148823	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD2	4761	broad.mit.edu	37	17	37762573	37762573	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29654692	29654692	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYC	4802	broad.mit.edu	37	1	41235169	41235169	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25477488	25477488	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51226456	51226456	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAP	79576	broad.mit.edu	37	X	119068536	119068536	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD1	85407	broad.mit.edu	37	16	50667134	50667135	+	Frame_Shift_Ins	INS	-	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821809	5821809	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65029547	65029547	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57111108	57111108	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56300796	56300796	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56312887	56312887	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56424392	56424392	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7065106	7065106	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588321	247588321	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247597298	247597298	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56572782	56572782	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144101617	144101617	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC2L	26155	broad.mit.edu	37	1	880905	880905	+	Silent	SNP	C	A	A	rs149040522		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC2L	26155	broad.mit.edu	37	1	889421	889421	+	Missense_Mutation	SNP	C	A	A	rs3828050		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL4	8715	broad.mit.edu	37	18	31599524	31599524	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117669992	117669992	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117701684	117701684	+	Intron	SNP	C	A	A	rs147367060	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26116061	26116061	+	Intron	SNP	G	A	A	rs28998832	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32188606	32188606	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	26918152	26918152	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100129158	100129158	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89155032	89155032	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110886808	110886808	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132407565	132407565	+	Silent	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35792526	35792526	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY5R	4889	broad.mit.edu	37	4	164271759	164271759	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I2	8856	broad.mit.edu	37	3	119533825	119533825	+	Splice_Site	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A1	3164	broad.mit.edu	37	12	52449072	52449072	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115411743	115411743	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50722988	50722988	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50733715	50733715	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51254933	51254934	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64428680	64428680	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152027482	152027482	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152031055	152031055	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE4A	54780	broad.mit.edu	37	10	123718998	123718998	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C2	22978	broad.mit.edu	37	10	104866274	104866274	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9086206	9086206	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973450	107973450	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUMB	8650	broad.mit.edu	37	14	73789827	73789827	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69103104	69103104	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP153	9972	broad.mit.edu	37	6	17688816	17688816	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135310997	135310997	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	153965594	153965594	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13360750	13360750	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3726349	3726349	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62564934	62564934	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101821832	101821832	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYX	60506	broad.mit.edu	37	X	41333566	41333566	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28000591	28000591	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183601430	183601430	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OFD1	8481	broad.mit.edu	37	X	13762484	13762484	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OFD1	8481	broad.mit.edu	37	X	13786121	13786121	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102462382	102462382	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193333429	193333429	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67290644	67290644	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPLAH	26873	broad.mit.edu	37	8	145113227	145113227	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62730101	62730101	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRM1	4988	broad.mit.edu	37	6	154410984	154410984	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57995501	57995501	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C8	138802	broad.mit.edu	37	9	107331656	107331656	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C8	138802	broad.mit.edu	37	9	107331807	107331807	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13F1	138805	broad.mit.edu	37	9	107267268	107267269	+	Missense_Mutation	DNP	CA	TG	TG			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978138	247978138	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845177	248845177	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1Q1	158131	broad.mit.edu	37	9	125377093	125377093	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695185	247695185	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D3	120775	broad.mit.edu	37	11	6943155	6943155	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248113156	248113156	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366414	248366414	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308449	248308449	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436676	248436676	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436752	248436752	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248437127	248437127	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551620	248551621	+	Frame_Shift_Ins	INS	-	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W1	26692	broad.mit.edu	37	6	29012594	29012594	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55136162	55136162	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A5	81318	broad.mit.edu	37	11	51411781	51411781	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55432949	55432949	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K13	390433	broad.mit.edu	37	14	20502863	20502863	+	Nonsense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51Q1	390061	broad.mit.edu	37	11	5443936	5443936	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E8	390079	broad.mit.edu	37	11	5878090	5878090	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52M1	119772	broad.mit.edu	37	11	4567362	4567362	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A3	390083	broad.mit.edu	37	11	5968608	5968608	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56B1	387748	broad.mit.edu	37	11	5757967	5757967	+	Frame_Shift_Del	DEL	T	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207585	58207585	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B3	441608	broad.mit.edu	37	11	58169980	58169980	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563911	55563911	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H1	26341	broad.mit.edu	37	3	97852271	97852272	+	Frame_Shift_Ins	INS	-	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188804	98188804	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98073296	98073296	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55594726	55594726	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M8	219484	broad.mit.edu	37	11	56258455	56258455	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5W2	390148	broad.mit.edu	37	11	55682124	55682124	+	5'Flank	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B1	135946	broad.mit.edu	37	7	143701028	143701028	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B3	150681	broad.mit.edu	37	2	240985276	240985276	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6Y1	391112	broad.mit.edu	37	1	158517437	158517437	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24892122	24892122	+	Splice_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59345602	59345602	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSCP1	127700	broad.mit.edu	37	1	36885931	36885931	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP2	92736	broad.mit.edu	37	17	72921751	72921751	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX6	9127	broad.mit.edu	37	22	21380577	21380577	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC5	140886	broad.mit.edu	37	X	90691663	90691663	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE3	139793	broad.mit.edu	37	X	55289626	55289626	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112542647	112542647	+	5'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35492401	35492401	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAM	5066	broad.mit.edu	37	5	102260668	102260668	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135204895	135204895	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPLN	89932	broad.mit.edu	37	14	73727284	73727284	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39597742	39597742	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25453356	25453356	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	161990305	161990305	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50111265	50111265	+	Splice_Site	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150832785	150832785	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127253908	127253908	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX6	5080	broad.mit.edu	37	11	31815482	31815482	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX2	5089	broad.mit.edu	37	6	32155933	32155934	+	Splice_Site	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91873299	91873299	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55570366	55570366	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55973880	55973880	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138550	56138550	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH8	5100	broad.mit.edu	37	13	53420300	53420300	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH8	5100	broad.mit.edu	37	13	53420511	53420511	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181958	140181958	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140745167	140745167	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140746231	140746231	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140754620	140754620	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544891	82544891	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394783	233394783	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCP4	5121	broad.mit.edu	37	21	41239372	41239372	+	Translation_Start_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1B	9468	broad.mit.edu	37	X	24605308	24605308	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105197799	105197799	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6IP	10015	broad.mit.edu	37	3	33906811	33906811	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183032947	183032947	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20705774	20705774	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66833714	66833714	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145016139	145016139	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	58273027	58273027	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149283345	149283345	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44152042	44152042	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54953672	54953672	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA1	5160	broad.mit.edu	37	X	19367581	19367581	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK3	5165	broad.mit.edu	37	X	24513069	24513069	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPN	10630	broad.mit.edu	37	1	13936946	13936946	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31983824	31983824	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD7	79955	broad.mit.edu	37	10	102783789	102783789	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119044326	119044326	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECI	10455	broad.mit.edu	37	6	4117422	4117422	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI2	57161	broad.mit.edu	37	14	56645093	56645093	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179533491	179533491	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB1	5207	broad.mit.edu	37	X	54985181	54985181	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGRMC1	10857	broad.mit.edu	37	X	118370259	118370259	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58342234	58342234	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF8	23133	broad.mit.edu	37	X	54022108	54022108	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHGDH	26227	broad.mit.edu	37	1	120263979	120263979	+	Intron	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79650327	79650327	+	3'UTR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118498933	118498933	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60563197	60563197	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21147516	21147516	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICK1	9463	broad.mit.edu	37	22	38468617	38468617	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130427168	130427168	+	Missense_Mutation	SNP	C	A	A	rs151220675		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130435261	130435261	+	Silent	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8809052	8809052	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151214576	151214576	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM3	83394	broad.mit.edu	37	17	6364785	6364785	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22144955	22144955	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25121378	25121378	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47852796	47852796	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47927531	47927531	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110408305	110408305	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110432916	110432916	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110453508	110453508	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51890625	51890625	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51944753	51944753	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2A	5320	broad.mit.edu	37	1	20302256	20302256	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186862291	186862291	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48581019	48581019	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB2	5330	broad.mit.edu	37	15	40586455	40586455	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198950287	198950287	+	Silent	SNP	G	T	T	rs144487956	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144997654	144997654	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204198174	204198174	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161160270	161160270	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD3	8985	broad.mit.edu	37	7	100855983	100855983	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131830040	131830040	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131913111	131913111	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PM20D1	148811	broad.mit.edu	37	1	205809437	205809437	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74315134	74315134	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMP2	5375	broad.mit.edu	37	8	82357047	82357047	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKD	25953	broad.mit.edu	37	2	219204767	219204767	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118199464	118199464	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84622790	84622791	+	Intron	DNP	GG	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121230884	121230884	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53104043	53104043	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON1	5444	broad.mit.edu	37	7	94935712	94935712	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POR	5447	broad.mit.edu	37	7	75552087	75552087	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTED	317754	broad.mit.edu	37	21	14983108	14983108	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F3	25833	broad.mit.edu	37	11	120180336	120180336	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81734915	81734915	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81751860	81751860	+	Splice_Site	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94903326	94903326	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	347161	347161	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94732255	94732255	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF1	65121	broad.mit.edu	37	1	12854318	12854318	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM11	56981	broad.mit.edu	37	11	45117403	45117403	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121774658	121774658	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121828725	121828725	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23521077	23521077	+	Intron	SNP	G	T	T	rs145670659	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREPL	9581	broad.mit.edu	37	2	44586880	44586880	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIC285	85441	broad.mit.edu	37	20	62198149	62198149	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57512833	57512833	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG1	5571	broad.mit.edu	37	12	49406921	49406929	+	Intron	DEL	TTAACCTGG	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54401818	54401818	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT1	3276	broad.mit.edu	37	19	50191343	50191343	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT2	3275	broad.mit.edu	37	21	48083500	48083500	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23396683	23396691	+	Intron	DEL	GCACAATCT	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3702357	3702357	+	3'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128177603	128177604	+	Intron	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40A	55660	broad.mit.edu	37	2	153520576	153520576	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1L1	221823	broad.mit.edu	37	7	18067492	18067492	+	5'Flank	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45130867	45130867	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS37	136242	broad.mit.edu	37	7	141536247	141536247	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228003480	228003480	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD4	23550	broad.mit.edu	37	2	113949864	113949864	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227077910	227077910	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43690702	43690702	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43771681	43771681	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC4	5704	broad.mit.edu	37	19	40477036	40477036	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD10	5716	broad.mit.edu	37	X	107331000	107331000	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD10	5716	broad.mit.edu	37	X	107334817	107334817	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMF1	9491	broad.mit.edu	37	20	1143718	1143718	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD1	139411	broad.mit.edu	37	X	23412273	23412273	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11579307	11579307	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11591678	11591678	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11596643	11596643	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11596647	11596647	+	Silent	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71328162	71328162	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71418563	71418563	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27310768	27310768	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN3	5774	broad.mit.edu	37	9	112184955	112184956	+	Intron	DNP	TC	AT	AT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157984996	157984996	+	Intron	SNP	C	A	A	rs34989053		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71078133	71078133	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29581714	29581714	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121597076	121597076	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52370125	52370125	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220384375	220384375	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPA2	57186	broad.mit.edu	37	20	20582347	20582347	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109380142	109380142	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3	8498	broad.mit.edu	37	19	5933469	5933469	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2866678	2866678	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160264211	160264211	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79317851	79317851	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP7	5931	broad.mit.edu	37	X	16870709	16870709	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM33	155435	broad.mit.edu	37	7	155504087	155504087	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135958976	135958976	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48387881	48387881	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125617997	125617997	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79386433	79386433	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111695587	111695587	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175956124	175956124	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107080568	107080568	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117249833	117249833	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS17	26575	broad.mit.edu	37	6	153365019	153365019	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116259626	116259626	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116279846	116279846	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163172524	163172524	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240969437	240969437	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDL1	9028	broad.mit.edu	37	16	727795	727795	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90021158	90021158	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEB	6009	broad.mit.edu	37	7	151174501	151174502	+	Splice_Site	DNP	CC	GA	GA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130897400	130897400	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104930762	104930762	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121001251	121001251	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49743302	49743302	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF128	79589	broad.mit.edu	37	X	105937716	105937716	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF128	79589	broad.mit.edu	37	X	106016114	106016114	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144B	255488	broad.mit.edu	37	6	18457301	18457301	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF207	388591	broad.mit.edu	37	1	6269923	6269923	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF212	285498	broad.mit.edu	37	4	1090674	1090674	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF2	6045	broad.mit.edu	37	1	185060780	185060780	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF44	22838	broad.mit.edu	37	5	175959138	175959138	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77282816	77282816	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117609599	117609599	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10465982	10465982	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467184	10467184	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10468596	10468597	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55534687	55534687	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP3	79657	broad.mit.edu	37	12	48063795	48063795	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP3	79657	broad.mit.edu	37	12	48091368	48091368	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10L	140801	broad.mit.edu	37	14	47120870	47120870	+	Frame_Shift_Del	DEL	G	-	-	rs141953926		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL10	6134	broad.mit.edu	37	X	153631968	153631968	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL30	6156	broad.mit.edu	37	8	99054345	99054345	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA1	6195	broad.mit.edu	37	1	26887237	26887237	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78865276	78865276	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7230553	7230553	+	Missense_Mutation	SNP	G	C	C	rs142616407	byFrequency	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH1	89765	broad.mit.edu	37	21	43897650	43897650	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH6A	81492	broad.mit.edu	37	19	46299364	46299364	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH6A	81492	broad.mit.edu	37	19	46307977	46307977	+	Nonsense_Mutation	SNP	C	A	A	rs148871208	byFrequency;by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN3	10313	broad.mit.edu	37	11	63487648	63487649	+	Missense_Mutation	DNP	GG	TT	TT	rs150093726		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70154087	70154087	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNDC2A	84127	broad.mit.edu	37	16	12145987	12145987	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRA	6256	broad.mit.edu	37	9	137293753	137293754	+	Intron	INS	-	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRB	6257	broad.mit.edu	37	6	33163925	33163925	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38943461	38943461	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237881823	237881823	+	Splice_Site	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237936818	237936818	+	Splice_Site	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33876546	33876546	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33999197	33999197	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34015043	34015043	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A5	6276	broad.mit.edu	37	1	153512581	153512581	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS1	22870	broad.mit.edu	37	19	55748126	55748126	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASS6	163786	broad.mit.edu	37	1	100588014	100588014	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84362769	84362769	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123780522	123780522	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAPER	49855	broad.mit.edu	37	15	76696787	76696787	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGN	10590	broad.mit.edu	37	6	25652562	25652562	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166901690	166901690	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167060953	167060953	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167168061	167168061	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29983544	29983544	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110452656	110452656	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31B	25956	broad.mit.edu	37	10	102283707	102283707	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13858199	13858199	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L	6400	broad.mit.edu	37	14	81968961	81968961	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELK	58515	broad.mit.edu	37	3	53925857	53925857	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELO	83642	broad.mit.edu	37	22	50644659	50644659	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83739928	83739928	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3E	9723	broad.mit.edu	37	7	83029344	83029345	+	Frame_Shift_Ins	INS	-	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122629686	122629686	+	Splice_Site	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122634241	122634241	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6A	57556	broad.mit.edu	37	5	115838024	115838024	+	Splice_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48052531	48052531	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063041	48063041	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063050	48063050	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94933527	94933527	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61234152	61234152	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB5	5268	broad.mit.edu	37	18	61160146	61160146	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINI2	5276	broad.mit.edu	37	3	167183195	167183195	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47158147	47158147	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29898877	29898877	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF1	7536	broad.mit.edu	37	11	64537758	64537758	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B5	83443	broad.mit.edu	37	6	144416564	144416564	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFI1	9814	broad.mit.edu	37	22	31946170	31946170	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFI1	9814	broad.mit.edu	37	22	31946179	31946179	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPB	6439	broad.mit.edu	37	2	85894864	85894864	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4A	63898	broad.mit.edu	37	8	19221651	19221651	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2826407	2826407	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17789527	17789527	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84237419	84237419	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC2	79628	broad.mit.edu	37	5	148441803	148441803	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51220046	51220046	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49127037	49127037	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA2	387914	broad.mit.edu	37	13	26621089	26621089	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHMT1	6470	broad.mit.edu	37	17	18243551	18243551	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149019	52149019	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC5	8778	broad.mit.edu	37	19	52129430	52129430	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51959013	51959013	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIKE1	80143	broad.mit.edu	37	1	115317020	115317020	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1915473	1915473	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1629708	1629708	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164737500	164737500	+	Missense_Mutation	SNP	G	A	A	rs138397431	byFrequency	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31931987	31931987	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160593822	160593822	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48524893	48524893	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44680367	44680367	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122755762	122755762	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122811998	122811998	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26800700	26800700	+	5'UTR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135376426	135376426	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43204724	43204724	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43253070	43253070	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43262194	43262194	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A3	51296	broad.mit.edu	37	11	60714008	60714008	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A2	6567	broad.mit.edu	37	X	73693482	73693482	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22380969	22380969	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A1	6570	broad.mit.edu	37	8	20008258	20008258	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A1	6573	broad.mit.edu	37	21	46945968	46945968	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A12	116085	broad.mit.edu	37	11	64368152	64368152	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A24	29957	broad.mit.edu	37	1	108681711	108681711	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92352809	92352809	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A2	11001	broad.mit.edu	37	15	50515330	50515330	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	9892342	9892342	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A2	7780	broad.mit.edu	37	1	26371649	26371649	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A2	10568	broad.mit.edu	37	4	25675965	25675965	+	Missense_Mutation	SNP	G	T	T	rs116219115	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A3	142680	broad.mit.edu	37	9	140126579	140126579	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A1	81539	broad.mit.edu	37	12	46592512	46592513	+	Missense_Mutation	DNP	CG	AA	AA	rs138242331	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47173648	47173648	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18242435	18242435	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18280107	18280107	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A7	7922	broad.mit.edu	37	6	33168967	33168967	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A2	124935	broad.mit.edu	37	17	1494602	1494602	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A3	126969	broad.mit.edu	37	1	95330289	95330289	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85260837	85260837	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A4	6532	broad.mit.edu	37	17	28539837	28539837	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70148690	70148690	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70148709	70148709	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40366496	40366496	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70633330	70633330	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173505131	173505131	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103090302	103090302	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135106567	135106567	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48472153	48472153	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21350125	21350125	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN12L	342615	broad.mit.edu	37	17	33802074	33802074	+	Silent	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN12L	342615	broad.mit.edu	37	17	33806457	33806457	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84455480	84455480	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD3	4088	broad.mit.edu	37	15	67457257	67457257	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128633831	128633831	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128650469	128650469	+	Silent	SNP	G	T	T	rs145557250	byFrequency	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2054677	2054677	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11138491	11138491	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106901507	106901507	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156243245	156243245	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMO	6608	broad.mit.edu	37	7	128845342	128845342	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMU1	55234	broad.mit.edu	37	9	33071822	33071822	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI2	6591	broad.mit.edu	37	8	49832627	49832627	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP91	9892	broad.mit.edu	37	6	84350818	84350818	+	Silent	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127343141	127343141	+	Intron	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25470426	25470426	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25313088	25313088	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96950178	96950178	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP70	6625	broad.mit.edu	37	19	49610944	49610944	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX14	57231	broad.mit.edu	37	6	86257157	86257157	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101625092	101625092	+	Intron	SNP	C	A	A	rs138865886	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX5	27131	broad.mit.edu	37	20	17932182	17932182	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179319664	179319664	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186541230	186541230	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108339057	108339057	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106737195	106737195	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106907368	106907368	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS2	6655	broad.mit.edu	37	14	50626482	50626482	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23737536	23737536	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231067564	231067564	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118642151	118642151	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35792573	35792573	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228882763	228882763	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK13	153218	broad.mit.edu	37	5	147661755	147661755	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINLW1	57119	broad.mit.edu	37	20	44170794	44170794	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINLW1	57119	broad.mit.edu	37	20	44171545	44171545	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12496079	12496079	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON1	10418	broad.mit.edu	37	11	14063263	14063263	+	Intron	DEL	A	-	-	rs113227652		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRED1	161742	broad.mit.edu	37	15	38591588	38591588	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158639649	158639649	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54872432	54872432	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRL	6345	broad.mit.edu	37	16	4253001	4253001	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH1	54434	broad.mit.edu	37	12	109192721	109192721	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149502693	149502693	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSR4	6748	broad.mit.edu	37	X	153063479	153063479	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSSCA1	10534	broad.mit.edu	37	11	65338163	65338163	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX6	280657	broad.mit.edu	37	X	47972753	47972753	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52677009	52677009	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52682352	52682352	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116778444	116778444	+	Intron	DEL	T	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA4	7903	broad.mit.edu	37	5	100151993	100151993	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA6	338596	broad.mit.edu	37	10	17363209	17363209	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA6	338596	broad.mit.edu	37	10	17365138	17365138	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104126897	104126897	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123220443	123220443	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99786203	99786203	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT3	6774	broad.mit.edu	37	17	40468916	40468916	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK17B	9262	broad.mit.edu	37	2	197002295	197002295	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5448581	5448581	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32B	55351	broad.mit.edu	37	4	5458480	5458480	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML3	161003	broad.mit.edu	37	13	39546837	39546837	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48809666	48809666	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STYXL1	51657	broad.mit.edu	37	7	75659657	75659657	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C4	27233	broad.mit.edu	37	2	109002889	109002889	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2B1	6820	broad.mit.edu	37	19	49100182	49100182	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	883154	883154	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT5H	6829	broad.mit.edu	37	19	39955697	39955697	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD2	56241	broad.mit.edu	37	22	24582315	24582315	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	32909545	32909545	+	3'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33405290	33405290	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNRG	11276	broad.mit.edu	37	17	35900314	35900314	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7488057	7488057	+	3'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32634278	32634278	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF7L	54457	broad.mit.edu	37	X	100532940	100532940	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP2	6895	broad.mit.edu	37	12	53895653	53895653	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102244013	102244013	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TASP1	55617	broad.mit.edu	37	20	13610571	13610571	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9B	23061	broad.mit.edu	37	5	179290820	179290820	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1XR1	79718	broad.mit.edu	37	3	176750982	176750982	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44554666	44554666	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF25	22980	broad.mit.edu	37	16	89977673	89977673	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDG	6996	broad.mit.edu	37	12	104376487	104376487	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104471794	104471794	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27197664	27197664	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20876106	20876106	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70332883	70332883	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX11	56159	broad.mit.edu	37	X	69843921	69843921	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX11	56159	broad.mit.edu	37	X	69898599	69898599	+	Intron	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50696815	50696815	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50696835	50696835	+	Intron	DEL	T	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2L1	29842	broad.mit.edu	37	2	122004483	122004483	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB1	7040	broad.mit.edu	37	19	41847699	41847699	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218609196	218609196	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177645	89177645	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM5	9333	broad.mit.edu	37	15	43545161	43545161	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH1L	51497	broad.mit.edu	37	20	57565975	57565975	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43797577	43797577	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC6	79228	broad.mit.edu	37	16	3074228	3074228	+	5'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11441716	11441716	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11871417	11871417	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138169367	138169367	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153539266	153539266	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171853282	171853282	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63004131	63004131	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR8	51311	broad.mit.edu	37	X	12937852	12937852	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19488927	19488927	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19489007	19489007	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC8	147138	broad.mit.edu	37	17	76130845	76130845	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44403633	44403633	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	125899959	125899959	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	130184920	130184920	+	Silent	SNP	G	T	T	rs138159153	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM133	83935	broad.mit.edu	37	11	100863563	100863563	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM202	338949	broad.mit.edu	37	15	72691081	72691081	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM26	219623	broad.mit.edu	37	10	63190892	63190893	+	Intron	DNP	GG	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM49	81671	broad.mit.edu	37	17	57916972	57916972	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM51	55092	broad.mit.edu	37	1	15541749	15541749	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM62	80021	broad.mit.edu	37	15	43430790	43430790	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM72	643236	broad.mit.edu	37	10	45430010	45430010	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMIGD2	126259	broad.mit.edu	37	19	4292732	4292732	+	Nonsense_Mutation	SNP	G	T	T	rs144046862		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68964603	68964603	+	Splice_Site	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10B	8795	broad.mit.edu	37	8	22881835	22881835	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122063061	122063061	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNMD	64102	broad.mit.edu	37	X	99854595	99854595	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6A	27327	broad.mit.edu	37	16	24815923	24815923	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1MT	116447	broad.mit.edu	37	8	144397842	144397842	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42680226	42680226	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144320281	144320281	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1491779	1491779	+	Intron	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186332406	186332406	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10916476	10916476	+	Splice_Site	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10996093	10996093	+	RNA	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF1	7185	broad.mit.edu	37	9	123686073	123686073	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45522796	45522796	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72969024	72969024	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM17	51127	broad.mit.edu	37	1	228596162	228596162	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM55	84675	broad.mit.edu	37	8	67061784	67061784	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068508	189068508	+	Silent	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT11	60487	broad.mit.edu	37	6	126319418	126319418	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72973718	72973718	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101375480	101375480	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2427906	2427906	+	Missense_Mutation	SNP	C	G	G	rs148532424		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77397489	77397489	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234879162	234879162	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116599310	116599310	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98508005	98508005	+	Silent	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135797337	135797337	+	Missense_Mutation	SNP	C	G	G	rs118203395		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51870965	51870965	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73046712	73046712	+	RNA	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSLP	85480	broad.mit.edu	37	5	110407739	110407739	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67855092	67855092	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN1	10103	broad.mit.edu	37	1	46650797	46650797	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC12	54970	broad.mit.edu	37	11	113211339	113211339	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15186852	15186852	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91007748	91007748	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL12	23170	broad.mit.edu	37	22	43575638	43575638	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL12	23170	broad.mit.edu	37	22	43576790	43576790	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219618722	219618722	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179408023	179408023	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179413591	179413591	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179432942	179432942	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179434396	179434396	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179442278	179442278	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179529215	179529216	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179588928	179588928	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179594234	179594234	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179610535	179610535	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179614934	179614934	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72240154	72240154	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72246281	72246281	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBE1	51175	broad.mit.edu	37	6	112402209	112402209	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8103114	8103114	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP2	7288	broad.mit.edu	37	19	49398567	49398567	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWSG1	57045	broad.mit.edu	37	18	9337148	9337148	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNB	167838	broad.mit.edu	37	6	139569031	139569031	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43863444	43863444	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103359295	103359295	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70148413	70148413	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70156417	70156418	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK2	9706	broad.mit.edu	37	17	19713872	19713872	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43541422	43541422	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17758111	17758111	+	Silent	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35403093	35403093	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54305103	54305103	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54528648	54528648	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13D	201294	broad.mit.edu	37	17	73836587	73836587	+	Splice_Site	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF3A	65110	broad.mit.edu	37	13	115067172	115067172	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF3B	65109	broad.mit.edu	37	X	118986661	118986661	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPK1A	11045	broad.mit.edu	37	19	36159571	36159571	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126207126	126207126	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17542673	17542673	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216062061	216062061	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216219923	216219923	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216219960	216219960	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216462805	216462805	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP11	8237	broad.mit.edu	37	X	47106710	47106710	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57640595	57640595	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP38	84640	broad.mit.edu	37	4	144135716	144135716	+	Missense_Mutation	SNP	A	T	T	rs140701873		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP40	55230	broad.mit.edu	37	2	234433233	234433233	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP43	124739	broad.mit.edu	37	17	9604600	9604600	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP50	373509	broad.mit.edu	37	15	50838794	50838794	+	5'UTR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5034004	5034004	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101748667	101748667	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30207728	30207728	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144750883	144750883	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	120692429	120692429	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	124931012	124931012	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	13184669	13184669	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37627226	37627226	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37819327	37819327	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46204225	46204225	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52445026	52445026	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54171174	54171174	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	71539387	71539387	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	90898798	90898798	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	100537624	100537624	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23427504	23427504	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	25610245	25610245	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4743966	4743966	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49000380	49000380	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49010699	49010699	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49941906	49941906	+	IGR	DEL	C	-	-	rs77830019	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55071594	55071595	+	IGR	DNP	GA	TT	TT			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55972710	55972711	+	IGR	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56064800	56064800	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216130	56216130	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216953	56216953	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59132892	59132892	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6016379	6016379	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6078665	6078665	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89502044	89502044	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	108675093	108675093	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	115026456	115026456	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	56294272	56294272	+	IGR	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19241009	19241009	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19255671	19255671	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19957049	19957049	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29297294	29297294	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	37513202	37513202	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53394852	53394852	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104303	59104303	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19118150	19118150	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19422313	19422313	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806591	19806591	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147012	20147012	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147135	20147135	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20148332	20148332	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	24974599	24974599	+	IGR	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	25900934	25900934	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	29063098	29063098	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57150292	57150292	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	83159180	83159180	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102462338	102462338	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20457128	20457128	+	IGR	SNP	A	G	G	rs60585083	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22448427	22448427	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	49265344	49265344	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50087800	50087800	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	77272475	77272475	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84859497	84859497	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97094621	97094621	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20607172	20607173	+	IGR	INS	-	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31984967	31984967	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178112	32178112	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178427	32178427	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32402002	32402002	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32823838	32823838	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926642	32926642	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33006545	33006545	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33020398	33020398	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380077	33380077	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380097	33380097	+	IGR	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33414090	33414090	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33497927	33497927	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33500863	33500863	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33571858	33571858	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33571924	33571924	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33661799	33661799	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52976009	52976009	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	15673657	15673657	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20624040	20624040	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20688141	20688141	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26771726	26771726	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30433411	30433411	+	IGR	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	41092520	41092520	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	61549493	61549493	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14392337	14392337	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	33421846	33421846	+	IGR	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	41901465	41901465	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	41901856	41901856	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	51933390	51933390	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	14975409	14975409	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22498791	22498791	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	34080445	34080445	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54120465	54120465	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106433595	106433595	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	108048040	108048040	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	108048042	108048042	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12900403	12900403	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	13172321	13172321	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146587132	146587132	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148902542	148902542	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903075	148903075	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149060137	149060137	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157030385	157030385	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157831157	157831157	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424725	158424725	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424727	158424727	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164312419	164312420	+	IGR	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220490243	220490243	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	224762570	224762570	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	59465754	59465754	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11589400	11589400	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	31571493	31571493	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	34664074	34664074	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181090	11181090	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	23808998	23808998	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32114615	32114615	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	20958590	20958590	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107314756	107314756	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131414950	131414950	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132361643	132361643	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	136956859	136956859	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162359172	162359172	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17527000	17527000	+	IGR	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182559580	182559580	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	190176708	190176708	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194141862	194141862	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	200525109	200525109	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222809302	222809302	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	41384111	41384111	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91777866	91777866	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91924860	91924860	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91936701	91936701	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92118461	92118461	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96521235	96521235	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	113847362	113847362	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	131245530	131245530	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	17913731	17913731	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35257461	35257461	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	36211589	36211589	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	39255937	39255937	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75379036	75379036	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856756	82856756	+	IGR	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87373098	87373098	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96386503	96386503	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	111321577	111321577	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	125384481	125384481	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130057998	130057998	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135865582	135865582	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135966755	135966755	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	17553857	17553857	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	28824933	28824933	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43901057	43901057	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	44997041	44997041	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57461965	57461965	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70257343	70257343	+	IGR	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70276729	70276729	+	IGR	DEL	C	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	73793251	73793251	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	73793522	73793522	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9212935	9212935	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9405280	9405280	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9699906	9699907	+	IGR	INS	-	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	110285376	110285376	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126508249	126508249	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	129098333	129098333	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	145108795	145108795	+	IGR	SNP	C	A	A	rs56151447		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451017	15451017	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	163136293	163136293	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165455863	165455863	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911139	25911139	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28708548	28708548	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84761033	84761033	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	161333178	161333178	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29231340	29231340	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29297700	29297700	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30435355	30435355	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	3979311	3979311	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48181438	48181438	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80662991	80662991	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9660949	9660949	+	IGR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707066	144707066	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149589564	149589564	+	IGR	SNP	A	T	T	rs144528753	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	18002191	18002191	+	IGR	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	21260170	21260170	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	23603203	23603203	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38695312	38695312	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48887466	48887466	+	IGR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56357256	56357256	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020544	63020544	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354305	63354305	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63466172	63466172	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6932671	6932671	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9655513	9655513	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	111821837	111821837	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47503667	47503667	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	55435778	55435778	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7277161	7277161	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	93156391	93156391	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689186	30689186	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	33529078	33529078	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68429201	68429201	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	79585303	79585303	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	89700110	89700110	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98908554	98908554	+	IGR	SNP	A	G	G	rs1810713		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98908655	98908655	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	101035070	101035071	+	IGR	INS	-	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106297051	106297051	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124461128	124461128	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134599062	134599062	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134774358	134774358	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135160040	135160040	+	IGR	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147279753	147279753	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179554	26179554	+	IGR	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26522430	26522430	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40750287	40750287	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46048285	46048285	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48022377	48022377	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48183597	48183597	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52589597	52589597	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52613107	52613107	+	IGR	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55307931	55307931	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	61999522	61999522	+	IGR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	6340506	6340506	+	IGR	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64770995	64770995	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73618550	73618550	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	74963279	74963279	+	IGR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75249918	75249918	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75250194	75250194	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75555679	75555679	+	IGR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79817288	79817288	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79830112	79830112	+	IGR	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89295546	89295546	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89295555	89295555	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89544780	89544780	+	IGR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92478926	92478926	+	IGR	SNP	C	T	T	rs4573453		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108303503	108303503	+	Splice_Site	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX2	25806	broad.mit.edu	37	2	71148364	71148364	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCX3B	425054	broad.mit.edu	37	X	8433438	8433438	+	5'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R4	317703	broad.mit.edu	37	19	53770944	53770944	+	5'Flank	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN1	8876	broad.mit.edu	37	6	133004338	133004338	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN3	55350	broad.mit.edu	37	6	133044911	133044911	+	3'UTR	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPREB1	7441	broad.mit.edu	37	22	22599662	22599662	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12328835	12328835	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG2	23584	broad.mit.edu	37	11	124618406	124618406	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17830709	17830709	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54614754	54614754	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98736075	98736075	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98822875	98822875	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98844898	98844898	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP4	11193	broad.mit.edu	37	13	41636824	41636824	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP5	51186	broad.mit.edu	37	X	102612943	102612943	+	3'UTR	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR26	80232	broad.mit.edu	37	1	224619521	224619521	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR34	89891	broad.mit.edu	37	9	131398630	131398630	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85560338	85560338	+	Intron	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122399784	122399784	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR69	164781	broad.mit.edu	37	2	228735029	228735029	+	5'Flank	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54444111	54444111	+	Missense_Mutation	SNP	G	T	T	rs113781282		TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1962707	1962707	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175446018	175446018	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96025823	96025823	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK3	65267	broad.mit.edu	37	X	54280245	54280245	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30921859	30921859	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WTIP	126374	broad.mit.edu	37	19	34986530	34986530	+	Intron	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC1	23286	broad.mit.edu	37	5	167850650	167850650	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31567508	31567508	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168107344	168107344	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73048820	73048820	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPOT	11260	broad.mit.edu	37	12	64815186	64815186	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21335370	21335370	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YME1L1	10730	broad.mit.edu	37	10	27437936	27437936	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC2	64848	broad.mit.edu	37	5	112860956	112860956	+	Intron	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100391721	100391721	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB25	7597	broad.mit.edu	37	14	64953726	64953726	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46550122	46550122	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46559724	46559724	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H15	55854	broad.mit.edu	37	2	187371499	187371499	+	Silent	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144590139	144590139	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC3	51304	broad.mit.edu	37	3	44975430	44975430	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC8	29801	broad.mit.edu	37	22	20127706	20127706	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC8	29801	broad.mit.edu	37	22	20128827	20128827	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145187456	145187456	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND1	79752	broad.mit.edu	37	8	82627319	82627319	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72834018	72834018	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77763199	77763199	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768313	77768313	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP14	57677	broad.mit.edu	37	19	36832249	36832249	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP28	140612	broad.mit.edu	37	19	57064966	57064966	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC1	7545	broad.mit.edu	37	3	147128064	147128064	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC1	7545	broad.mit.edu	37	3	147128846	147128846	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIK1	284307	broad.mit.edu	37	19	58096301	58096301	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140482052	140482052	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF133	7692	broad.mit.edu	37	20	18297168	18297168	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58572990	58572990	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF138	7697	broad.mit.edu	37	7	64292490	64292490	+	3'UTR	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF155	7711	broad.mit.edu	37	19	44501580	44501580	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22156742	22156742	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6976861	6976861	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52193350	52193350	+	Silent	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF226	7769	broad.mit.edu	37	19	44679240	44679240	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74624286	74624286	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58724291	58724291	+	Silent	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF287	57336	broad.mit.edu	37	17	16456684	16456684	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53313840	53313840	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF324B	388569	broad.mit.edu	37	19	58962930	58962930	+	5'Flank	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38344464	38344464	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF398	57541	broad.mit.edu	37	7	148851299	148851299	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF415	55786	broad.mit.edu	37	19	53625894	53625894	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49669980	49669980	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49670412	49670412	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31138374	31138374	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF45	7596	broad.mit.edu	37	19	44417580	44417580	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF461	92283	broad.mit.edu	37	19	37129923	37129923	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF516	9658	broad.mit.edu	37	18	74154222	74154223	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF532	55205	broad.mit.edu	37	18	56606662	56606662	+	Intron	SNP	T	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30935025	30935025	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF543	125919	broad.mit.edu	37	19	57839611	57839611	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF546	339327	broad.mit.edu	37	19	40504258	40504258	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57908275	57908275	+	Intron	DEL	G	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF557	79230	broad.mit.edu	37	19	7083876	7083876	+	3'UTR	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF572	137209	broad.mit.edu	37	8	125989981	125989981	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF583	147949	broad.mit.edu	37	19	56934258	56934258	+	Splice_Site	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF585B	92285	broad.mit.edu	37	19	37677515	37677515	+	Silent	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	59439	59439	+	Silent	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	64973	64973	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58490843	58490843	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF619	285267	broad.mit.edu	37	3	40529172	40529172	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363512	22363512	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF680	340252	broad.mit.edu	37	7	64023256	64023257	+	Intron	DNP	CC	AA	AA			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF692	55657	broad.mit.edu	37	1	249144510	249144510	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF695	57116	broad.mit.edu	37	1	247150365	247150365	+	Silent	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF702P	79986	broad.mit.edu	37	19	53484207	53484207	+	RNA	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF704	619279	broad.mit.edu	37	8	81733894	81733894	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF708	7562	broad.mit.edu	37	19	21476272	21476272	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF761	388561	broad.mit.edu	37	19	53952873	53952873	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF816A	125893	broad.mit.edu	37	19	53454041	53454041	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57781733	57781733	+	Intron	SNP	A	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF845	91664	broad.mit.edu	37	19	53855101	53855101	+	Silent	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22586234	22586234	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238045984	238045984	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN29	146050	broad.mit.edu	37	15	43658617	43658617	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134659759	134659759	+	Intron	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30914467	30914467	+	RNA	SNP	C	A	A	rs116099904	by1000genomes	TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30925158	30925158	+	RNA	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30942459	30942459	+	RNA	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55065788	55065788	+	5'Flank	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22090018	22090018	+	5'UTR	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22236965	22236965	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39304982	39304982	+	RNA	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	16458806	16458806	+	5'Flank	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077590	32077590	+	RNA	SNP	A	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	16722028	16722028	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	1854576	1854576	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	57392778	57392778	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186673098	186673098	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89247416	89247416	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417278	89417278	+	RNA	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89417444	89417444	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89925913	89925913	+	Intron	SNP	T	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89976564	89976564	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90108923	90108923	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90193042	90193042	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91678932	91678932	+	5'Flank	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159818624	159818624	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	187250282	187250282	+	Intron	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9240967	9240967	+	5'UTR	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	17353917	17353917	+	RNA	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142008644	142008644	+	Intron	SNP	C	A	A			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142104307	142104307	+	Intron	SNP	C	G	G			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142495041	142495041	+	Intron	SNP	C	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38374816	38374816	+	RNA	DEL	T	-	-			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	33617748	33617748	+	5'Flank	SNP	T	C	C			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513855	66513855	+	RNA	SNP	G	T	T			TCGA-38-4631-01A-01D-1753-08	TCGA-38-4631-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
