Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ARHGAP18	93663	genome.wustl.edu	37	6	129937374	129937374	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	6	129937374	129937374	G	A	SNP	ARHGAP18	NM_033515.2	human	genbank	58_37c	-1	validated	missense	c.1027	p.P343S	1.000	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
CACNA1E	777	genome.wustl.edu	37	1	181726119	181726119	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	1	181726119	181726119	C	T	SNP	CACNA1E	NM_000721.2	human	genbank	58_37c	+1	reviewed	missense	c.4186	p.R1396C	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CDH1	999	genome.wustl.edu	37	16	68844098	68844098	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	16	68844098	68844098	A	G	SNP	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	splice_site	c.688-2	e6-2	1.000	-	-	-	no_errors
CIT	11113	genome.wustl.edu	37	12	120156088	120156088	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	12	120156088	120156088	G	A	SNP	CIT	NM_007174.1	human	genbank	58_37c	-1	validated	missense	c.4004	p.P1335L	1.000	NULL	HMMSmart_SM00133,HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_CPSASE_2,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
CTAG2	30848	genome.wustl.edu	37	X	153881613	153881613	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	X	153881613	153881613	G	A	SNP	CTAG2	NM_020994.3	human	genbank	58_37c	-1	reviewed	silent	c.177	p.G59	0.000	NULL	HMMPfam_Pcc1	-	no_errors
CTGF	1490	genome.wustl.edu	37	6	132270681	132270681	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	6	132270681	132270681	C	T	SNP	CTGF	NM_001901.2	human	genbank	58_37c	-1	reviewed	missense	c.773	p.R258H	1.000	HMMPfam_Cys_knot	HMMPfam_IGFBP,HMMSmart_SM00121,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,PatternScan_IGFBP_N_1	-	no_errors
DDC	1644	genome.wustl.edu	37	7	50605566	50605566	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	7	50605566	50605566	C	T	SNP	DDC	NM_000790.3	human	genbank	58_37c	-1	reviewed	missense	c.427	p.V143M	1.000	HMMPfam_Pyridoxal_deC,superfamily_PLP-dependent transferases	HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC,superfamily_PLP-dependent transferases	-	no_errors
DMKN	93099	genome.wustl.edu	37	19	36002410	36002412	+	In_Frame_Del	DEL	CTG	CTG	-	rs71940230	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	19	36002410	36002412	CTG	-	DEL	DMKN	NM_033317.3	human	genbank	58_37c	-1	reviewed	in_frame_del	c.821_819	p.S274in_frame_del	0.000:0.000:0.000	NULL	NULL	-	no_errors
GMCL1L	64396	genome.wustl.edu	37	5	177612634	177612634	+	RNA	SNP	A	A	C	rs7715618	byCluster;byFrequency;by2Hit2Allele;by1000genomes;byHapmap	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	5	177612634	177612634	A	C	SNP	GMCL1L	NR_003281.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.103	-	-	-	pseudogene
LOC100288820	0	genome.wustl.edu	37	1	233972031	233972031	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	1	233972031	233972031	G	A	SNP	LOC100288820	XM_002342176.1	human	genbank	58_37c	-1	model	missense	c.197	p.P66L	0.991	HMMPfam_LMWPc,HMMSmart_SM00226,superfamily_Phosphotyrosine protein phosphatases I	HMMPfam_LMWPc,HMMSmart_SM00226,superfamily_Phosphotyrosine protein phosphatases I	-	no_errors
NARS2	79731	genome.wustl.edu	37	11	78204212	78204212	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	11	78204212	78204212	G	C	SNP	NARS2	NM_024678.4	human	genbank	58_37c	-1	validated	missense	c.719	p.P240R	1.000	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases	HMMPfam_tRNA-synt_2,HMMPfam_tRNA_anti,superfamily_Nucleic acid-binding proteins,superfamily_Class II aaRS and biotin synthetases	-	no_errors
OR4N4	283694	genome.wustl.edu	37	15	22382595	22382595	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	15	22382595	22382595	A	G	SNP	OR4N4	NM_001005241.1	human	genbank	58_37c	+1	provisional	silent	c.123	p.G41	0.998	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936095	178936095	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	3	178936095	178936095	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1637	p.Q546R	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIP5K1C	23396	genome.wustl.edu	37	19	3653547	3653547	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	19	3653547	3653547	T	C	SNP	PIP5K1C	NM_012398.1	human	genbank	58_37c	-1	reviewed	missense	c.662	p.Y221C	1.000	HMMPfam_PIP5K,HMMSmart_PIPKc,superfamily_SSF56104	HMMPfam_PIP5K,HMMSmart_PIPKc,superfamily_SSF56104	-	no_errors
RAD21	5885	genome.wustl.edu	37	8	117862955	117862955	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	8	117862955	117862955	C	G	SNP	RAD21	NM_006265.2	human	genbank	58_37c	-1	reviewed	missense	c.1522	p.E508Q	1.000	NULL	HMMPfam_Rad21_Rec8,HMMPfam_Rad21_Rec8_N	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179467306	179467306	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	2	179467306	179467306	G	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.47119	p.P15707T	0.922	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
ZNF45	7596	genome.wustl.edu	37	19	44418767	44418767	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0EW-01A-21D-A10Y-09	TCGA-A2-A0EW-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a045a04e-4f7b-4f9a-a733-47ad24475496	7ada2974-e227-405b-82c2-53909e722858	19	44418767	44418767	T	C	SNP	ZNF45	NM_003425.3	human	genbank	58_37c	-1	validated	missense	c.821	p.K274R	1.000	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
