Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA10	0	genome.wustl.edu	37	17	67190107	67190107	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	17	67190107	67190107	G	A	SNP	ABCA10	NM_080282.3	human	genbank	58_37c	-1	reviewed	nonsense	c.1369	p.Q457*	0.000	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANKRD20B	0	genome.wustl.edu	37	2	95463729	95463731	+	RNA	DEL	TTA	TTA	-	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	TTA	TTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	2	95463729	95463731	TTA	-	DEL	ANKRD20B	NR_003366.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.060:0.075:0.075	-	-	-	pseudogene
ATP1A4	0	genome.wustl.edu	37	1	160134150	160134150	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	160134150	160134150	C	G	SNP	ATP1A4	NM_144699.3	human	genbank	58_37c	+1	reviewed	missense	c.983	p.A328G	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
ATP9A	0	genome.wustl.edu	37	20	50238636	50238636	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	20	50238636	50238636	G	T	SNP	ATP9A	NM_006045.1	human	genbank	58_37c	-1	validated	missense	c.2092	p.Q698K	1.000	HMMPfam_Hydrolase,superfamily_HAD-like	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
ATXN1	0	genome.wustl.edu	37	6	16326909	16326909	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	6	16326909	16326909	G	T	SNP	ATXN1	NM_000332.3	human	genbank	58_37c	-1	reviewed	missense	c.1633	p.P545T	1.000	NULL	HMMSmart_SM00536,HMMPfam_AXH,superfamily_AXH domain	-	no_errors
AWAT2	0	genome.wustl.edu	37	X	69263413	69263413	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	X	69263413	69263413	C	A	SNP	AWAT2	NM_001002254.1	human	genbank	58_37c	-1	reviewed	missense	c.387	p.K129N	0.998	HMMPfam_DAGAT	HMMPfam_DAGAT	-	no_errors
BRWD3	0	genome.wustl.edu	37	X	79999555	79999555	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	X	79999555	79999555	A	G	SNP	BRWD3	NM_153252.4	human	genbank	58_37c	-1	reviewed	silent	c.789	p.H263	1.000	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
C5	0	genome.wustl.edu	37	9	123789552	123789552	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	9	123789552	123789552	T	A	SNP	C5	NM_001735.2	human	genbank	58_37c	-1	reviewed	missense	c.759	p.R253S	1.000	HMMPfam_A2M_N	HMMPfam_ANATO,HMMSmart_ANATO,PatternScan_ANAPHYLATOXIN_1,HMMPfam_A2M,HMMPfam_A2M_N,superfamily_Terp_cyc_toroid,HMMPfam_A2M_recep,superfamily_AM_receptor_bind,HMMPfam_A2M_N_2,HMMPfam_A2M_comp,superfamily_Anaphylatoxin,HMMPfam_NTR,HMMSmart_C345C,PatternScan_ALPHA_2_MACROGLOBULIN	-	no_errors
CCDC21	0	genome.wustl.edu	37	1	26582252	26582252	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	26582252	26582252	T	G	SNP	CCDC21	NM_022778.2	human	genbank	58_37c	+1	provisional	missense	c.799	p.W267G	1.000	NULL	NULL	-	no_errors
CCDC60	0	genome.wustl.edu	37	12	119966483	119966483	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	12	119966483	119966483	G	A	SNP	CCDC60	NM_178499.3	human	genbank	58_37c	+1	validated	silent	c.1293	p.K431	1.000	NULL	NULL	-	no_errors
CHPT1	0	genome.wustl.edu	37	12	102117039	102117039	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	12	102117039	102117039	A	C	SNP	CHPT1	NM_020244.2	human	genbank	58_37c	+1	validated	missense	c.874	p.K292Q	1.000	PatternScan_LIPOYL	HMMPfam_CDP-OH_P_transf,PatternScan_CDP_ALCOHOL_P_TRANSF,PatternScan_LIPOYL	-	no_errors
CX3CR1	0	genome.wustl.edu	37	3	39306996	39306997	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	3	39306996	39306997	TC	-	DEL	CX3CR1	NM_001337.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1005_1004	p.G335fs	0.002:0.002	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
ENSG00000224343	0	genome.wustl.edu	37	6	160133141	160133141	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	6	160133141	160133141	A	G	SNP	ENSG00000224343	ENST00000442642	human	ensembl	58_37c	-1	known	silent	c.123	p.A41	0.008	NULL	NULL	-	no_start_codon
ENSG00000224913	0	genome.wustl.edu	37	7	71674286	71674286	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	7	71674286	71674286	T	C	SNP	ENSG00000224913	ENST00000418172	human	ensembl	58_37c	-1	known	missense	c.104	p.K35R	0.073	NULL	NULL	-	no_start_codon:no_stop_codon
ENSG00000230974	0	genome.wustl.edu	37	4	49152548	49152548	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	4	49152548	49152548	T	C	SNP	ENSG00000230974	ENST00000447635	human	ensembl	58_37c	-1	known	missense	c.31	p.M11V	0.000	NULL	NULL	-	no_stop_codon
ENSG00000230974	0	genome.wustl.edu	37	4	49152559	49152559	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	4	49152559	49152559	T	C	SNP	ENSG00000230974	ENST00000447635	human	ensembl	58_37c	-1	known	missense	c.20	p.E7G	0.000	NULL	NULL	-	no_stop_codon
ENSG00000230974	0	genome.wustl.edu	37	4	49152569	49152569	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	4	49152569	49152569	T	C	SNP	ENSG00000230974	ENST00000447635	human	ensembl	58_37c	-1	known	missense	c.10	p.N4D	0.000	NULL	NULL	-	no_stop_codon
ENSG00000249227	0	genome.wustl.edu	37	1	202593877	202593887	+	RNA	DEL	GTGTGTGGTGT	GTGTGTGGTGT	-	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	GTGTGTGGTGT	GTGTGTGGTGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	202593877	202593887	GTGTGTGGTGT	-	DEL	ENSG00000249227	ENST00000513983	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.000:0.000:0.001:0.001:0.002:0.006:0.007:0.007:0.005:0.002:0.001	-	-	-	no_errors
ENTPD7	0	genome.wustl.edu	37	10	101458349	101458349	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	10	101458349	101458349	C	T	SNP	ENTPD7	NM_020354.3	human	genbank	58_37c	+1	validated	missense	c.1069	p.P357S	1.000	HMMPfam_GDA1_CD39	HMMPfam_GDA1_CD39,PatternScan_GDA1_CD39_NTPASE	-	no_errors
ERC1	0	genome.wustl.edu	37	12	1517405	1517405	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	12	1517405	1517405	C	G	SNP	ERC1	NM_178040.2	human	genbank	58_37c	+1	reviewed	missense	c.3016	p.P1006A	1.000	NULL	superfamily_Prefoldin,HMMPfam_RBD-FIP,HMMPfam_Cast	-	no_errors
FIGLA	0	genome.wustl.edu	37	2	71012744	71012744	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	2	71012744	71012744	T	C	SNP	FIGLA	NM_001004311.3	human	genbank	58_37c	-1	reviewed	missense	c.412	p.S138G	0.120	superfamily_HLH helix-loop-helix DNA-binding domain	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
GIMAP6	0	genome.wustl.edu	37	7	150325382	150325382	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	7	150325382	150325382	G	T	SNP	GIMAP6	NM_024711.4	human	genbank	58_37c	-1	reviewed	missense	c.304	p.P102T	0.805	HMMPfam_AIG1,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_AIG1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
GLI2	0	genome.wustl.edu	37	2	121685040	121685040	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	2	121685040	121685040	C	G	SNP	GLI2	NM_005270.4	human	genbank	58_37c	+1	reviewed	missense	c.252	p.H84Q	0.904	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
GPR116	0	genome.wustl.edu	37	6	46851971	46851971	+	Silent	SNP	G	G	A	rs138073254	byFrequency	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	6	46851971	46851971	G	A	SNP	GPR116	NM_001098518.1	human	genbank	58_37c	-1	validated	silent	c.366	p.C122	0.874	PatternScan_EGF_2	HMMPfam_SEA,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_EGF_2,HMMPfam_ig,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_Immunoglobulin,superfamily_SEA domain	-	no_errors
GSK3A	0	genome.wustl.edu	37	19	42744148	42744148	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	19	42744148	42744148	G	C	SNP	GSK3A	NM_019884.2	human	genbank	58_37c	-1	validated	missense	c.430	p.L144V	0.999	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
GTF2IRD2P1	0	genome.wustl.edu	37	7	72658429	72658429	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	7	72658429	72658429	G	A	SNP	GTF2IRD2P1	NR_002164.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.982	-	-	-	pseudogene
GTF2IRD2P1	0	genome.wustl.edu	37	7	72667580	72667580	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	7	72667580	72667580	G	A	SNP	GTF2IRD2P1	NR_002164.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.986	-	-	-	pseudogene
HIST1H2AI	0	genome.wustl.edu	37	6	27776320	27776320	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	6	27776320	27776320	C	A	SNP	HIST1H2AI	NM_003509.2	human	genbank	58_37c	+1	reviewed	missense	c.333	p.N111K	1.000	HMMSmart_SM00414,superfamily_Histone-fold	HMMSmart_SM00414,PatternScan_HISTONE_H2A,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HIST1H2BE	0	genome.wustl.edu	37	6	26184396	26184397	+	In_Frame_Ins	INS	-	-	TGG	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	6	26184396	26184397	-	TGG	INS	HIST1H2BE	NM_003523.2	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.373_374	p.S125in_frame_insLA	1.000:1.000	superfamily_Histone-fold	HMMSmart_SM00427,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
IQGAP2	0	genome.wustl.edu	37	5	75970488	75970488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	5	75970488	75970488	C	T	SNP	IQGAP2	NM_006633.2	human	genbank	58_37c	+1	validated	missense	c.3481	p.L1161F	1.000	HMMSmart_SM00323,superfamily_GTPase activation domain GAP	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RasGAP_C,PatternScan_WW_DOMAIN_1,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP,superfamily_Calponin-homology domain CH-domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ITGAX	0	genome.wustl.edu	37	16	31384615	31384615	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	16	31384615	31384615	A	G	SNP	ITGAX	NM_000887.3	human	genbank	58_37c	+1	reviewed	silent	c.2412	p.E804	0.000	HMMPfam_Integrin_alpha2,superfamily_SSF69179	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_Int_alpha,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_SSF53300,superfamily_SSF69179,superfamily_SSF69318	-	no_errors
ITIH2	0	genome.wustl.edu	37	10	7773943	7773943	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	10	7773943	7773943	T	C	SNP	ITIH2	NM_002216.2	human	genbank	58_37c	+1	validated	missense	c.1631	p.V544A	0.342	NULL	HMMPfam_VWA,HMMSmart_VWA,HMMSmart_VIT,HMMPfam_ITI_HC_C,HMMPfam_VIT,superfamily_SSF53300	-	no_errors
KBTBD4	0	genome.wustl.edu	37	11	47599443	47599444	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	11	47599443	47599444	-	A	INS	KBTBD4	NM_018095.4	human	genbank	58_37c	-1	validated	frame_shift_ins	c.157_156	p.L52fs	1.000:1.000	superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_Kelch_2,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KGFLP2	0	genome.wustl.edu	37	9	41962541	41962541	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	9	41962541	41962541	T	C	SNP	KGFLP2	NR_003670.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.884	-	-	-	pseudogene
KIAA0319	0	genome.wustl.edu	37	6	24559272	24559272	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	6	24559272	24559272	C	G	SNP	KIAA0319	NM_014809.3	human	genbank	58_37c	-1	reviewed	missense	c.2703	p.L901F	1.000	NULL	HMMSmart_SM00089,superfamily_PKD domain,HMMSmart_SM00060,HMMSmart_SM00765	-	no_errors
LIN9	0	genome.wustl.edu	37	1	226426761	226426761	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	226426761	226426761	G	T	SNP	LIN9	NM_173083.2	human	genbank	58_37c	-1	provisional	silent	c.1204	p.R402	1.000	NULL	HMMPfam_DIRP	-	no_errors
LNX2	0	genome.wustl.edu	37	13	28134091	28134091	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	13	28134091	28134091	G	T	SNP	LNX2	NM_153371.3	human	genbank	58_37c	-1	validated	missense	c.1256	p.A419D	0.996	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
LOC401533	0	genome.wustl.edu	37	9	84702647	84702647	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	9	84702647	84702647	G	A	SNP	LOC401533	XR_016904.3	human	genbank	58_37c	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC642103	0	genome.wustl.edu	37	7	36270	36270	+	Splice_Site	SNP	A	A	C	rs4785776	byCluster	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	7	36270	36270	A	C	SNP	LOC642103	XM_936233.4	human	genbank	58_37c	+1	model	splice_site	c.3390-1	e29-1	0.014	-	-	-	no_start_codon:pseudogene:no_stop_codon
LYST	0	genome.wustl.edu	37	1	235891402	235891402	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	235891402	235891402	T	C	SNP	LYST	NM_000081.2	human	genbank	58_37c	-1	reviewed	missense	c.9136	p.N3046D	1.000	superfamily_PH domain-like	HMMPfam_Beach,superfamily_BEACH domain,PatternScan_COPPER_BLUE,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
MAP3K13	0	genome.wustl.edu	37	3	185165736	185165736	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	3	185165736	185165736	G	A	SNP	MAP3K13	ENST00000392515	human	ensembl	58_37c	+1	known	nonsense	c.861	p.W287*	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_stop_codon
MAP3K6	0	genome.wustl.edu	37	1	27682955	27682955	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	27682955	27682955	G	C	SNP	MAP3K6	NM_004672.3	human	genbank	58_37c	-1	reviewed	nonsense	c.3561	p.Y1187*	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MLL	0	genome.wustl.edu	37	11	118344574	118344575	+	Frame_Shift_Ins	INS	-	-	TAAA	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	11	118344574	118344575	-	TAAA	INS	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.2700_2701	p.S900fs	1.000:1.000	NULL	PatternScan_HMGI_Y,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,PatternScan_RECR,HMMPfam_AT_hook,PatternScan_EF_HAND_1,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MOGAT3	0	genome.wustl.edu	37	7	100842014	100842014	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	7	100842014	100842014	G	C	SNP	MOGAT3	NM_178176.2	human	genbank	58_37c	-1	provisional	missense	c.386	p.T129S	0.955	HMMPfam_DAGAT	HMMPfam_DAGAT	-	no_errors
NSFL1C	0	genome.wustl.edu	37	20	1435746	1435746	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	20	1435746	1435746	G	C	SNP	NSFL1C	NM_016143.3	human	genbank	58_37c	-1	reviewed	missense	c.310	p.Q104E	1.000	NULL	HMMPfam_UBX,HMMSmart_SM00166,superfamily_UBA-like,HMMPfam_SEP,HMMSmart_SM00553,superfamily_NSFL1 (p97 ATPase) cofactor p47 SEP domain,superfamily_Ubiquitin-like	-	no_errors
NTRK2	0	genome.wustl.edu	37	9	87563383	87563383	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	9	87563383	87563383	A	T	SNP	NTRK2	NM_006180.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1771	p.K591*	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_LRR_1,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_IGc2,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_I-set,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726,superfamily_SSF52058	-	no_errors
ONECUT2	0	genome.wustl.edu	37	18	55103476	55103477	+	In_Frame_Ins	INS	-	-	CAC	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	18	55103476	55103477	-	CAC	INS	ONECUT2	NM_004852.2	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.528_529	p.180in_frame_insH	0.715:1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_CUT,superfamily_Homeodomain-like	-	no_errors
OR2T33	0	genome.wustl.edu	37	1	248436655	248436655	+	Silent	SNP	C	C	G	rs140771747	byFrequency	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	248436655	248436655	C	G	SNP	OR2T33	NM_001004695.1	human	genbank	58_37c	-1	provisional	silent	c.462	p.G154	0.038	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PARP4	0	genome.wustl.edu	37	13	25058867	25058867	+	Missense_Mutation	SNP	C	C	T	rs143070451	byFrequency	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	13	25058867	25058867	C	T	SNP	PARP4	NM_006437.3	human	genbank	58_37c	-1	reviewed	missense	c.1372	p.V458I	0.992	HMMPfam_PARP,superfamily_SSF56399	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_VWA,HMMSmart_VWA,superfamily_PARP_reg,HMMSmart_VIT,HMMPfam_PARP,HMMPfam_VIT,superfamily_SSF53300,superfamily_SSF56399	-	no_errors
PHKA2	0	genome.wustl.edu	37	X	18942252	18942252	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	X	18942252	18942252	G	T	SNP	PHKA2	NM_000292.2	human	genbank	58_37c	-1	reviewed	missense	c.1715	p.T572K	1.000	HMMPfam_PHK_AB	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors
RBM46	0	genome.wustl.edu	37	4	155719029	155719029	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	4	155719029	155719029	A	T	SNP	RBM46	NM_144979.3	human	genbank	58_37c	+1	validated	missense	c.218	p.Y73F	1.000	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
RFK	0	genome.wustl.edu	37	9	79009015	79009015	+	Missense_Mutation	SNP	T	C	C	rs147845416	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	9	79009015	79009015	T	C	SNP	RFK	ENST00000376736	human	ensembl	58_37c	-1	known	missense	c.73	p.I25V	1.000	HMMPfam_Flavokinase,superfamily_Riboflavin_kinase	HMMPfam_Flavokinase,superfamily_Riboflavin_kinase	-	no_errors
RHBDF2	0	genome.wustl.edu	37	17	74470176	74470176	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	17	74470176	74470176	T	C	SNP	RHBDF2	NM_024599.3	human	genbank	58_37c	-1	validated	missense	c.1600	p.M534V	0.984	NULL	HMMPfam_Rhomboid	-	no_errors
RNASEK	0	genome.wustl.edu	37	17	6917541	6917541	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	17	6917541	6917541	T	C	SNP	RNASEK	NM_001004333.3	human	genbank	58_37c	+1	validated	missense	c.233	p.L78P	1.000	NULL	NULL	-	no_errors
ROCK1	0	genome.wustl.edu	37	18	18586456	18586456	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	18	18586456	18586456	G	C	SNP	ROCK1	NM_005406.2	human	genbank	58_37c	-1	reviewed	missense	c.1741	p.L581V	1.000	NULL	HMMPfam_HR1,HMMSmart_S_TK_X,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Rho_Binding,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
SART3	0	genome.wustl.edu	37	12	108920132	108920132	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	12	108920132	108920132	G	A	SNP	SART3	NM_014706.3	human	genbank	58_37c	-1	reviewed	missense	c.2114	p.T705I	0.998	HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00386,HMMPfam_Lsm_interact,superfamily_TPR-like,superfamily_RNA-binding domain RBD	-	no_errors
SERHL2	0	genome.wustl.edu	37	22	42970004	42970004	+	Silent	SNP	G	G	C	rs147451679	byFrequency	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	22	42970004	42970004	G	C	SNP	SERHL2	NM_014509.3	human	genbank	58_37c	+1	provisional	silent	c.888	p.V296	0.974	superfamily_alpha/beta-Hydrolases	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	-	no_errors
SLC16A1	0	genome.wustl.edu	37	1	113456731	113456731	+	Missense_Mutation	SNP	C	C	T	rs151166713	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	113456731	113456731	C	T	SNP	SLC16A1	NM_003051.3	human	genbank	58_37c	-1	reviewed	missense	c.1285	p.V429I	0.336	superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors
SLC3A2	0	genome.wustl.edu	37	11	62652118	62652118	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	11	62652118	62652118	C	T	SNP	SLC3A2	NM_001012661.1	human	genbank	58_37c	+1	reviewed	silent	c.1170	p.F390	0.102	HMMSmart_SM00642,superfamily_(Trans)glycosidases	HMMPfam_Alpha-amylase,HMMSmart_SM00642,superfamily_(Trans)glycosidases,superfamily_Glycosyl hydrolase domain	-	no_errors
TCTEX1D2	0	genome.wustl.edu	37	3	196044967	196044972	+	In_Frame_Del	DEL	CTCAGC	CTCAGC	-	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	CTCAGC	CTCAGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	3	196044967	196044972	CTCAGC	-	DEL	TCTEX1D2	NM_152773.3	human	genbank	58_37c	-1	validated	in_frame_del	c.57_52	p.AE18in_frame_del	0.986:0.985:0.948:0.000:0.000:0.000	NULL	HMMPfam_Tctex-1	-	no_errors
TMEM86A	0	genome.wustl.edu	37	11	18723330	18723330	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	11	18723330	18723330	G	C	SNP	TMEM86A	NM_153347.1	human	genbank	58_37c	+1	provisional	missense	c.497	p.R166P	1.000	HMMPfam_YhhN	HMMPfam_YhhN	-	no_errors
TNFSF4	0	genome.wustl.edu	37	1	173157660	173157660	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	173157660	173157660	C	T	SNP	TNFSF4	NM_003326.3	human	genbank	58_37c	-1	reviewed	missense	c.202	p.E68K	0.009	HMMSmart_SM00207	HMMPfam_TNF,HMMSmart_SM00207,PatternScan_TNF_1,superfamily_TNF-like	-	no_errors
TRIM64B	0	genome.wustl.edu	37	11	89608899	89608899	+	Missense_Mutation	SNP	T	T	G	rs77843834	byFrequency	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	11	89608899	89608899	T	G	SNP	TRIM64B	ENST00000329862	human	ensembl	58_37c	-1	known	missense	c.287	p.E96A	0.000	HMMPfam_zf-B_box,HMMSmart_BBOX,superfamily_SSF57850	HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,HMMPfam_SPRY,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
TTC17	0	genome.wustl.edu	37	11	43411360	43411360	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	11	43411360	43411360	C	T	SNP	TTC17	NM_018259.5	human	genbank	58_37c	+1	validated	silent	c.408	p.S136	1.000	NULL	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
TTLL5	0	genome.wustl.edu	37	14	76246009	76246011	+	In_Frame_Del	DEL	AAC	AAC	-	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	AAC	AAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	14	76246009	76246011	AAC	-	DEL	TTLL5	NM_015072.4	human	genbank	58_37c	+1	reviewed	in_frame_del	c.2479_2481	p.N830in_frame_del	0.983:1.000:1.000	NULL	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
UGT2B7	0	genome.wustl.edu	37	4	69973931	69973931	+	Missense_Mutation	SNP	G	G	C	rs138302870	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	4	69973931	69973931	G	C	SNP	UGT2B7	NM_001074.2	human	genbank	58_37c	+1	validated	missense	c.1201	p.D401H	1.000	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
ULK2	0	genome.wustl.edu	37	17	19699025	19699025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	17	19699025	19699025	C	T	SNP	ULK2	NM_001142610.1	human	genbank	58_37c	-1	reviewed	missense	c.2011	p.G671R	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
USP1	0	genome.wustl.edu	37	1	62905637	62905637	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	1	62905637	62905637	T	G	SNP	USP1	NM_001017415.1	human	genbank	58_37c	+1	reviewed	silent	c.99	p.T33	0.997	NULL	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
WDR33	0	genome.wustl.edu	37	2	128526530	128526530	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	2	128526530	128526530	G	A	SNP	WDR33	NM_018383.3	human	genbank	58_37c	-1	reviewed	missense	c.250	p.P84S	1.000	NULL	HMMSmart_WD40,HMMPfam_Collagen,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
WWC3	0	genome.wustl.edu	37	X	10102560	10102560	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	X	10102560	10102560	C	G	SNP	WWC3	NM_015691.3	human	genbank	58_37c	+1	validated	missense	c.2687	p.S896W	0.336	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
ZNF16	0	genome.wustl.edu	37	8	146157623	146157623	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	8	146157623	146157623	C	T	SNP	ZNF16	NM_001029976.2	human	genbank	58_37c	-1	reviewed	missense	c.550	p.D184N	0.001	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF546	0	genome.wustl.edu	37	19	40520249	40520249	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A25E-01A-11D-A167-09	TCGA-A2-A25E-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8dce6a9d-ecb7-4699-9fda-1b09b1b1de43	17b3d764-49f2-4ba6-ac9e-44619e31943f	19	40520249	40520249	G	A	SNP	ZNF546	NM_178544.3	human	genbank	58_37c	+1	validated	missense	c.1072	p.E358K	0.044	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
