Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB9	23457	genome.wustl.edu	37	12	123424624	123424624	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	12	123424624	123424624	G	C	SNP	ABCB9	ENST00000442833	human	ensembl	58_37c	-1	known	missense	c.1777	p.P593A	0.007	NULL	HMMPfam_ABC_membrane,superfamily_ABC_TM_1,superfamily_SSF52540	-	no_errors
C13orf3	221150	genome.wustl.edu	37	13	21742333	21742333	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	13	21742333	21742333	C	A	SNP	SKA3	ENST00000314759	human	ensembl	58_37c	-1	known	silent	c.537	p.V179	0.000	NULL	NULL	-	no_errors
CACNA1G	8913	genome.wustl.edu	37	17	48669336	48669336	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	48669336	48669336	T	G	SNP	CACNA1G	NM_018896.3	human	genbank	58_37c	+1	validated	missense	c.2793	p.N931K	0.993	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
DDR1	780	genome.wustl.edu	37	6	30864625	30864625	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	6	30864625	30864625	G	C	SNP	DDR1	NM_013994.2	human	genbank	58_37c	+1	reviewed	missense	c.1852	p.E618Q	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_II,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Galactose-binding domain-like,superfamily_Protein kinase-like (PK-like)	-	no_errors
ENSG00000247966	0	genome.wustl.edu	37	20	48699460	48699460	+	RNA	SNP	A	A	C	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	20	48699460	48699460	A	C	SNP	UBE2V1	NM_021988.4	human	genbank	58_37c	-1	reviewed	splice_region	c.367-9	e4-9	0.824	-	-	-	no_errors
HNRNPU	3192	genome.wustl.edu	37	1	245027315	245027315	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	1	245027315	245027315	G	A	SNP	HNRNPU	NM_031844.2	human	genbank	58_37c	-1	reviewed	silent	c.295	p.L99	0.994	NULL	HMMPfam_SAP,HMMSmart_SM00513,HMMPfam_SPRY,HMMSmart_SM00449,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_SAP domain	-	no_errors
MEFV	4210	genome.wustl.edu	37	16	3293331	3293331	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	16	3293331	3293331	C	A	SNP	MEFV	NM_000243.2	human	genbank	58_37c	-1	reviewed	missense	c.2156	p.G719V	1.000	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY,HMMPfam_PAAD_DAPIN,HMMSmart_SM00589,superfamily_DEATH domain,HMMSmart_SM00449,superfamily_B-box zinc-binding domain	-	no_errors
MUM1L1	139221	genome.wustl.edu	37	X	105449533	105449535	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	X	105449533	105449535	TCT	-	DEL	MUM1L1	ENST00000337685	human	ensembl	58_37c	+1	known	in_frame_del	c.108_110	p.L37in_frame_del	0.001:0.047:0.086	NULL	superfamily_SSF63748	-	no_errors
PCDHB10	56126	genome.wustl.edu	37	5	140574447	140574447	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	5	140574447	140574447	G	A	SNP	PCDHB10	NM_018930.3	human	genbank	58_37c	+1	reviewed	silent	c.2322	p.S774	0.000	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PSG6	5675	genome.wustl.edu	37	19	43414783	43414783	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	19	43414783	43414783	G	A	SNP	PSG6	NM_002782.3	human	genbank	58_37c	-1	provisional	missense	c.655	p.R219W	0.000	superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
PTPN12	5782	genome.wustl.edu	37	7	77210798	77210798	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	7	77210798	77210798	A	T	SNP	PTPN12	NM_002835.3	human	genbank	58_37c	+1	reviewed	missense	c.263	p.Y88F	1.000	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799	HMMPfam_Y_phosphatase,HMMSmart_PTPc,PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799	-	no_errors
SLC1A6	6511	genome.wustl.edu	37	19	15061145	15061145	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	19	15061145	15061145	G	A	SNP	SLC1A6	NM_005071.1	human	genbank	58_37c	-1	provisional	silent	c.1557	p.I519	0.965	HMMPfam_SDF	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_1,PatternScan_NA_DICARBOXYL_SYMP_2	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7576863	7576863	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	17	7576863	7576863	A	-	DEL	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.983	p.F328fs	1.000	HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TPRG1	285386	genome.wustl.edu	37	3	188925280	188925280	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	3	188925280	188925280	C	T	SNP	TPRG1	NM_198485.3	human	genbank	58_37c	+1	validated	missense	c.107	p.P36L	0.001	NULL	NULL	-	no_errors
TULP4	56995	genome.wustl.edu	37	6	158924160	158924160	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	6	158924160	158924160	G	C	SNP	TULP4	NM_020245.3	human	genbank	58_37c	+1	validated	silent	c.3465	p.L1155	0.965	NULL	HMMPfam_Tub,superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_SOCS_box,HMMSmart_SM00320,superfamily_TNF-like,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
WDR51B	282809	genome.wustl.edu	37	12	89818991	89818991	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07U-01A-11W-A050-09	TCGA-A8-A07U-10A-01W-A055-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	e6409415-8453-489d-a731-49257cade2a3	bd1d1390-403b-4e65-9ecc-430b52d2f8af	12	89818991	89818991	C	A	SNP	POC1B	NM_172240.1	human	genbank	58_37c	-1	provisional	missense	c.1279	p.A427S	0.529	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
