Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADAMTS1	0	genome.wustl.edu	37	21	28212378	28212379	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	21	28212378	28212379	-	T	INS	ADAMTS1	NM_006988.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.1668_1667	p.P557fs	0.580:0.996	superfamily_TSP1	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1,HMMPfam_Reprolysin,HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMSmart_ACR,HMMPfam_ADAM_spacer1,PatternScan_DISINTEGRIN_1,superfamily_SSF55486	-	no_errors
ALPK3	0	genome.wustl.edu	37	15	85382261	85382262	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	15	85382261	85382262	-	A	INS	ALPK3	NM_020778.4	human	genbank	58_37c	+1	validated	frame_shift_ins	c.961_962	p.R321fs	1.000:1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
APOBEC4	0	genome.wustl.edu	37	1	183617405	183617405	+	Missense_Mutation	SNP	C	C	T	rs139605657	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	183617405	183617405	C	T	SNP	APOBEC4	NM_203454.2	human	genbank	58_37c	-1	reviewed	missense	c.512	p.R171H	0.977	NULL	HMMPfam_APOBEC_N,PatternScan_CYT_DCMP_DEAMINASES	-	no_errors
ARFGEF1	0	genome.wustl.edu	37	8	68179153	68179153	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	8	68179153	68179153	T	C	SNP	ARFGEF1	NM_006421.3	human	genbank	58_37c	-1	reviewed	missense	c.1879	p.S627G	1.000	superfamily_ARM-type_fold	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMPfam_DUF1981,superfamily_ARM-type_fold	-	no_errors
BCL6B	0	genome.wustl.edu	37	17	6927857	6927858	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	17	6927857	6927858	-	C	INS	BCL6B	NM_181844.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.539_540	p.S183fs	0.341:0.003	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
BCL9	0	genome.wustl.edu	37	1	147092581	147092581	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	147092581	147092581	C	G	SNP	BCL9	NM_004326.2	human	genbank	58_37c	+1	reviewed	missense	c.2620	p.P874A	1.000	NULL	NULL	-	no_errors
BRI3BP	0	genome.wustl.edu	37	12	125509844	125509845	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	12	125509844	125509845	-	G	INS	BRI3BP	NM_080626.5	human	genbank	58_37c	+1	validated	frame_shift_ins	c.624_625	p.P208fs	0.982:0.979	NULL	NULL	-	no_errors
CEP350	0	genome.wustl.edu	37	1	180062453	180062453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	180062453	180062453	C	T	SNP	CEP350	NM_014810.4	human	genbank	58_37c	+1	reviewed	missense	c.7213	p.L2405F	0.019	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_SSF74924	-	no_errors
CHSY3	0	genome.wustl.edu	37	5	129243904	129243904	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	5	129243904	129243904	C	G	SNP	CHSY3	NM_175856.4	human	genbank	58_37c	+1	validated	missense	c.937	p.P313A	1.000	NULL	HMMPfam_CHGN,superfamily_SSF53448	-	no_errors
CXorf22	0	genome.wustl.edu	37	X	35993847	35993847	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	X	35993847	35993847	G	A	SNP	CXorf22	NM_152632.3	human	genbank	58_37c	+1	validated	missense	c.2530	p.V844I	0.004	NULL	NULL	-	no_errors
DACT3	0	genome.wustl.edu	37	19	47151768	47151768	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	19	47151768	47151768	C	A	SNP	DACT3	NM_145056.2	human	genbank	58_37c	-1	validated	missense	c.1861	p.G621C	0.999	NULL	NULL	-	no_errors
DCHS1	0	genome.wustl.edu	37	11	6646655	6646655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	11	6646655	6646655	G	A	SNP	DCHS1	NM_003737.2	human	genbank	58_37c	-1	reviewed	missense	c.6920	p.P2307L	0.998	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
DCHS2	0	genome.wustl.edu	37	4	155219117	155219117	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	4	155219117	155219117	T	A	SNP	DCHS2	NM_017639.3	human	genbank	58_37c	-1	validated	missense	c.4984	p.I1662F	0.000	HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
DECR2	0	genome.wustl.edu	37	16	461494	461494	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	16	461494	461494	G	C	SNP	DECR2	NM_020664.3	human	genbank	58_37c	+1	validated	silent	c.795	p.L265	1.000	superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors
DKK3	0	genome.wustl.edu	37	11	11986224	11986225	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	11	11986224	11986225	-	A	INS	DKK3	NM_001018057.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.840_839	p.V281fs	0.998:1.000	NULL	HMMPfam_Dickkopf_N	-	no_errors
DMXL1	0	genome.wustl.edu	37	5	118511027	118511038	+	Splice_Site	DEL	CTACAGGTAACT	CTACAGGTAACT	-	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	CTACAGGTAACT	CTACAGGTAACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	5	118511027	118511038	CTACAGGTAACT	-	DEL	DMXL1	NM_005509.4	human	genbank	58_37c	+1	validated	splice_site_del	c.6758+7_6758+1	e27-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.108:0.005	-	-	-	no_errors
DSCAM	0	genome.wustl.edu	37	21	42080507	42080507	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	21	42080507	42080507	G	A	SNP	DSCAM	NM_001389.3	human	genbank	58_37c	-1	validated	silent	c.234	p.N78	1.000	HMMSmart_SM00408,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
DUS3L	0	genome.wustl.edu	37	19	5789306	5789307	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	19	5789306	5789307	-	C	INS	DUS3L	NM_020175.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.812_811	p.T271fs	0.000:0.000	NULL	HMMPfam_zf-CCCH,HMMPfam_Dus,PatternScan_UPF0034,superfamily_FMN-linked oxidoreductases,superfamily_CCCH zinc finger	-	no_errors
EPHB6	0	genome.wustl.edu	37	7	142568064	142568064	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	7	142568064	142568064	G	A	SNP	EPHB6	NM_004445.3	human	genbank	58_37c	+1	reviewed	missense	c.2705	p.R902H	0.999	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMSmart_SM00454,HMMSmart_SM00220,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Galactose-binding domain-like,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),HMMPfam_SAM_2,PatternScan_EGF_2	-	no_errors
FAM58B	0	genome.wustl.edu	37	1	200182991	200182991	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	200182991	200182991	G	A	SNP	FAM58B	NM_001105517.1	human	genbank	58_37c	+1	provisional	silent	c.300	p.V100	0.996	HMMSmart_CYCLIN,superfamily_Cyclin_like	HMMSmart_CYCLIN,PatternScan_CYCLINS,superfamily_Cyclin_like	-	no_errors
FCAR	0	genome.wustl.edu	37	19	55399582	55399582	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	19	55399582	55399582	C	-	DEL	FCAR	NM_002000.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.570	p.Y191fs	0.012	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
HIST1H2BK	0	genome.wustl.edu	37	6	27114425	27114425	+	Silent	SNP	G	G	A	rs72613637	byFrequency	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	6	27114425	27114425	G	A	SNP	HIST1H2BK	NM_080593.1	human	genbank	58_37c	-1	reviewed	silent	c.153	p.P51	0.998	HMMSmart_SM00427,HMMPfam_Histone,superfamily_Histone-fold	HMMSmart_SM00427,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
IKBKAP	0	genome.wustl.edu	37	9	111668755	111668755	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	9	111668755	111668755	C	T	SNP	IKBKAP	NM_003640.3	human	genbank	58_37c	-1	reviewed	missense	c.1471	p.E491K	0.990	HMMPfam_IKI3	HMMPfam_IKI3,superfamily_Amine_DH_B_like	-	no_errors
KCNA6	0	genome.wustl.edu	37	12	4919672	4919672	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	12	4919672	4919672	C	T	SNP	KCNA6	NM_002235.3	human	genbank	58_37c	+1	reviewed	silent	c.465	p.P155	1.000	NULL	HMMSmart_BTB,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_BTB/POZ_fold,superfamily_SSF81324	-	no_errors
KCNK9	0	genome.wustl.edu	37	8	140631121	140631121	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	8	140631121	140631121	C	T	SNP	KCNK9	NM_016601.2	human	genbank	58_37c	-1	reviewed	missense	c.505	p.G169R	1.000	HMMPfam_Ion_trans_2,superfamily_SSF81324	HMMPfam_Ion_trans_2,superfamily_SSF81324	-	no_errors
KIAA0922	0	genome.wustl.edu	37	4	154553903	154553904	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	4	154553903	154553904	-	G	INS	KIAA0922	NM_015196.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.4238_4239	p.P1414fs	0.989:0.992	NULL	NULL	-	no_errors
KRTAP4-7	0	genome.wustl.edu	37	17	39240627	39240627	+	Missense_Mutation	SNP	T	T	C	rs189343211	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	17	39240627	39240627	T	C	SNP	KRTAP4-7	ENST00000377731	human	ensembl	58_37c	+1	known	missense	c.169	p.S57P	0.032	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
LRBA	0	genome.wustl.edu	37	4	151392779	151392779	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	4	151392779	151392779	C	T	SNP	LRBA	NM_006726.2	human	genbank	58_37c	-1	validated	missense	c.6697	p.A2233T	1.000	HMMPfam_Beach,superfamily_BEACH domain	HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF1088,superfamily_WD40 repeat-like,superfamily_ARM repeat,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
MAP4	0	genome.wustl.edu	37	3	47894422	47894423	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	3	47894422	47894423	-	G	INS	MAP4	NM_001134364.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.3268_3267	p.T1089fs	1.000:1.000	NULL	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16902844	16902844	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	16902844	16902844	G	T	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	missense	c.2037	p.D679E	0.001	NULL	HMMPfam_DUF1220	-	no_errors
OBSL1	0	genome.wustl.edu	37	2	220427290	220427292	+	In_Frame_Del	DEL	CAC	CAC	-	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	CAC	CAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	2	220427290	220427292	CAC	-	DEL	OBSL1	NM_015311.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.2787_2785	p.V929in_frame_del	1.000:1.000:1.000	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
OR5T1	0	genome.wustl.edu	37	11	56043133	56043133	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	11	56043133	56043133	G	T	SNP	OR5T1	NM_001004745.1	human	genbank	58_37c	+1	provisional	missense	c.19	p.D7Y	0.000	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR6B1	0	genome.wustl.edu	37	7	143701799	143701799	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	7	143701799	143701799	C	T	SNP	OR6B1	NM_001005281.1	human	genbank	58_37c	+1	provisional	missense	c.710	p.S237F	0.159	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR8B8	0	genome.wustl.edu	37	11	124310466	124310466	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	11	124310466	124310466	G	T	SNP	OR8B8	NM_012378.1	human	genbank	58_37c	-1	provisional	missense	c.516	p.N172K	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PAWR	0	genome.wustl.edu	37	12	79990324	79990324	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	12	79990324	79990324	G	A	SNP	PAWR	NM_002583.2	human	genbank	58_37c	-1	reviewed	silent	c.798	p.S266	0.775	NULL	NULL	-	no_errors
PEX5	0	genome.wustl.edu	37	12	7343051	7343051	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	12	7343051	7343051	G	A	SNP	PEX5	NM_001131023.1	human	genbank	58_37c	+1	reviewed	silent	c.78	p.Q26	1.000	NULL	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452	-	no_errors
PIGV	0	genome.wustl.edu	37	1	27124150	27124150	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	27124150	27124150	A	T	SNP	PIGV	NM_017837.2	human	genbank	58_37c	+1	validated	missense	c.1297	p.T433S	0.007	HMMPfam_Mannosyl_trans2	HMMPfam_Mannosyl_trans2	-	no_errors
PPP2R5B	0	genome.wustl.edu	37	11	64700359	64700359	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	11	64700359	64700359	G	A	SNP	PPP2R5B	NM_006244.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1239	p.W413*	1.000	HMMPfam_B56	HMMPfam_B56	-	no_errors
PSMB11	0	genome.wustl.edu	37	14	23511993	23511993	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	14	23511993	23511993	G	A	SNP	PSMB11	NM_001099780.1	human	genbank	58_37c	+1	validated	missense	c.559	p.V187M	0.973	HMMPfam_Proteasome,superfamily_SSF56235	HMMPfam_Proteasome,PatternScan_PROTEASOME_B,superfamily_SSF56235	-	no_errors
PTEN	0	genome.wustl.edu	37	10	89653840	89653840	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	10	89653840	89653840	C	G	SNP	PTEN	ENST00000371953	human	ensembl	58_37c	+1	known	nonsense	c.138	p.Y46*	1.000	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_DSPc,HMMSmart_SM00404,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SETD2	0	genome.wustl.edu	37	3	47059192	47059192	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	3	47059192	47059192	C	T	SNP	SETD2	NM_014159.6	human	genbank	58_37c	-1	reviewed	missense	c.7469	p.R2490Q	1.000	HMMPfam_SRI_2	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508,HMMSmart_SM00570,superfamily_Ferritin-like,HMMPfam_SRI_2,PatternScan_ADH_IRON_1,superfamily_SET domain	-	no_errors
SLC18A2	0	genome.wustl.edu	37	10	119012920	119012920	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	10	119012920	119012920	C	A	SNP	SLC18A2	NM_003054.4	human	genbank	58_37c	+1	reviewed	missense	c.475	p.P159T	0.999	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SORBS2	0	genome.wustl.edu	37	4	186544746	186544747	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	4	186544746	186544747	-	T	INS	SORBS2	NM_021069.4	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.1825_1824	p.D608fs	1.000:0.761	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Sorb,HMMSmart_SM00459,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TKTL1	0	genome.wustl.edu	37	X	153533679	153533679	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	X	153533679	153533679	C	A	SNP	TKTL1	NM_012253.3	human	genbank	58_37c	+1	validated	missense	c.158	p.S53Y	1.000	superfamily_Thiamin diphosphate-binding fold (THDP-binding)	HMMPfam_Transketolase_N,HMMPfam_Transket_pyr,PatternScan_TRANSKETOLASE_2,HMMPfam_Transketolase_C,superfamily_TK C-terminal domain-like,superfamily_Thiamin diphosphate-binding fold (THDP-binding)	-	no_errors
TNKS1BP1	0	genome.wustl.edu	37	11	57076427	57076428	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	11	57076427	57076428	CT	-	DEL	TNKS1BP1	NM_033396.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.3758_3757	p.S1253fs	1.000:0.998	NULL	NULL	-	no_errors
TTN	0	genome.wustl.edu	37	2	179595715	179595715	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	2	179595715	179595715	A	G	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.13945	p.Y4649H	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TUBGCP5	0	genome.wustl.edu	37	15	22866766	22866766	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	15	22866766	22866766	T	A	SNP	TUBGCP5	NM_001102610.1	human	genbank	58_37c	+1	validated	missense	c.2378	p.V793D	1.000	HMMPfam_Spc97_Spc98	HMMPfam_Spc97_Spc98	-	no_errors
UCK1	0	genome.wustl.edu	37	9	134400562	134400563	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	9	134400562	134400563	-	T	INS	UCK1	NM_031432.2	human	genbank	58_37c	-1	validated	frame_shift_ins	c.699_698	p.D234fs	0.058:0.998	NULL	HMMPfam_PRK,superfamily_SSF52540	-	no_errors
UNC5D	0	genome.wustl.edu	37	8	35544126	35544126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	8	35544126	35544126	G	A	SNP	UNC5D	NM_080872.2	human	genbank	58_37c	+1	validated	missense	c.983	p.R328Q	0.973	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	PatternScan_SERPIN,HMMPfam_Death,HMMSmart_SM00005,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_ZU5,HMMSmart_SM00218,HMMSmart_SM00408,HMMSmart_SM00409,superfamily_DEATH domain,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
VCAM1	0	genome.wustl.edu	37	1	101190191	101190191	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	1	101190191	101190191	A	T	SNP	VCAM1	NM_001078.2	human	genbank	58_37c	+1	reviewed	missense	c.673	p.N225Y	0.980	superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
ZFP57	0	genome.wustl.edu	37	6	29640364	29640364	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	6	29640364	29640364	G	A	SNP	ZFP57	NM_001109809.2	human	genbank	58_37c	-1	reviewed	silent	c.1464	p.I488	0.025	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF726	0	genome.wustl.edu	37	19	24116032	24116032	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09E-01A-11W-A019-09	TCGA-A8-A09E-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	d6465963-5ea6-44a5-96b0-dff0b0fae4c4	950408ef-e597-4d7c-852d-865fbc66f75d	19	24116032	24116032	G	A	SNP	ZNF726	ENST00000322487	human	ensembl	58_37c	+1	known	missense	c.1114	p.E372K	0.007	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
