Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA10	10349	genome.wustl.edu	37	17	67181631	67181631	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	67181631	67181631	G	A	SNP	ABCA10	NM_080282.3	human	genbank	58_37c	-1	reviewed	silent	c.2484	p.I828	0.337	NULL	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANKRD28	23243	genome.wustl.edu	37	3	15755061	15755061	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	15755061	15755061	A	G	SNP	ANKRD28	NM_015199.2	human	genbank	58_37c	-1	provisional	missense	c.1073	p.L358P	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ARID1B	57492	genome.wustl.edu	37	6	157528561	157528561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	157528561	157528561	G	T	SNP	ARID1B	NM_017519.2	human	genbank	58_37c	+1	validated	missense	c.6232	p.V2078L	1.000	NULL	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like	-	no_errors
BTG4	54766	genome.wustl.edu	37	11	111367981	111367981	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	111367981	111367981	T	C	SNP	BTG4	NM_017589.2	human	genbank	58_37c	-1	reviewed	silent	c.465	p.E155	0.336	NULL	HMMPfam_BTG,HMMSmart_btg1,PatternScan_BTG_1,PatternScan_BTG_2	-	no_errors
CAGE1	285782	genome.wustl.edu	37	6	7373460	7373460	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	7373460	7373460	A	G	SNP	CAGE1	NM_205864.2	human	genbank	58_37c	-1	validated	missense	c.1184	p.I395T	0.000	NULL	NULL	-	no_errors
CCDC27	148870	genome.wustl.edu	37	1	3670779	3670779	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	3670779	3670779	C	T	SNP	CCDC27	NM_152492.2	human	genbank	58_37c	+1	validated	missense	c.416	p.T139I	0.991	NULL	NULL	-	no_errors
CD80	941	genome.wustl.edu	37	3	119263560	119263560	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	119263560	119263560	G	A	SNP	CD80	NM_005191.3	human	genbank	58_37c	-1	validated	silent	c.255	p.P85	0.000	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
CDH11	1009	genome.wustl.edu	37	16	64984859	64984859	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	64984859	64984859	G	A	SNP	CDH11	NM_001797.2	human	genbank	58_37c	-1	reviewed	missense	c.1705	p.L569F	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
CELF4	0	genome.wustl.edu	37	18	34850769	34850769	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	18	34850769	34850769	G	A	SNP	CELF4	NM_020180.3	human	genbank	58_37c	-1	reviewed	missense	c.1061	p.A354V	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
CHD6	84181	genome.wustl.edu	37	20	40081463	40081463	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	20	40081463	40081463	C	T	SNP	CHD6	NM_032221.3	human	genbank	58_37c	-1	reviewed	silent	c.3240	p.T1080	0.052	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DPP3	10072	genome.wustl.edu	37	11	66259056	66259056	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	66259056	66259056	C	T	SNP	DPP3	NM_005700.3	human	genbank	58_37c	+1	reviewed	missense	c.890	p.S297F	1.000	HMMPfam_Peptidase_M49	HMMPfam_Peptidase_M49	-	no_errors
DUSP27	92235	genome.wustl.edu	37	1	167088559	167088559	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	167088559	167088559	G	A	SNP	DUSP27	NM_001080426.1	human	genbank	58_37c	+1	provisional	missense	c.511	p.G171S	0.992	HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
EMB	133418	genome.wustl.edu	37	5	49695122	49695122	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	5	49695122	49695122	C	A	SNP	EMB	NM_198449.2	human	genbank	58_37c	-1	reviewed	missense	c.969	p.E323D	0.034	NULL	HMMSmart_SM00409,superfamily_Immunoglobulin	-	no_errors
ENSG00000219061	0	genome.wustl.edu	37	11	49854934	49854934	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	49854934	49854934	C	A	SNP	ENSG00000219061	ENST00000405176	human	ensembl	58_37c	-1	known	missense	c.1120	p.D374Y	0.077	HMMPfam_SPRY	PatternScan_SERPIN,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,HMMPfam_SPRY,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
ENTPD1	953	genome.wustl.edu	37	10	97626096	97626096	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	10	97626096	97626096	C	T	SNP	ENTPD1	NM_001776.5	human	genbank	58_37c	+1	validated	missense	c.1489	p.L497F	0.000	NULL	HMMPfam_GDA1_CD39,PatternScan_GDA1_CD39_NTPASE	-	no_errors
FAM196A	0	genome.wustl.edu	37	10	128973678	128973678	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	10	128973678	128973678	G	C	SNP	FAM196A	NM_001039762.2	human	genbank	58_37c	-1	validated	missense	c.982	p.P328A	0.002	NULL	NULL	-	no_errors
FXR1	8087	genome.wustl.edu	37	3	180686028	180686031	+	Frame_Shift_Del	DEL	CCTC	CCTC	-	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	CCTC	CCTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	180686028	180686031	CCTC	-	DEL	FXR1	NM_005087.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1388_1391	p.I465fs	1.000:0.998:1.000:1.000	NULL	HMMSmart_SM00322,HMMPfam_Agenet,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors
GP1BA	2811	genome.wustl.edu	37	17	4837204	4837204	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	4837204	4837204	C	T	SNP	GP1BA	ENST00000329125	human	ensembl	58_37c	+1	known	silent	c.1269	p.T423	0.000	NULL	HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like	-	no_errors
GPX5	2880	genome.wustl.edu	37	6	28497279	28497279	+	Missense_Mutation	SNP	G	G	A	rs145996851	byCluster;byFrequency;by1000genomes	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	28497279	28497279	G	A	SNP	GPX5	NM_001509.2	human	genbank	58_37c	+1	reviewed	missense	c.139	p.A47T	0.009	HMMPfam_GSHPx,superfamily_Thiordxn-like_fd	HMMPfam_GSHPx,PatternScan_GLUTATHIONE_PEROXID_1,PatternScan_GLUTATHIONE_PEROXID_2,superfamily_Thiordxn-like_fd	-	no_errors
GRM1	2911	genome.wustl.edu	37	6	146755726	146755726	+	Missense_Mutation	SNP	G	G	A	rs147964155	by1000genomes	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	146755726	146755726	G	A	SNP	GRM1	NM_000838.3	human	genbank	58_37c	+1	reviewed	missense	c.3379	p.E1127K	0.995	NULL	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,HMMPfam_GluR_Homer-bdg,superfamily_SSF53822	-	no_errors
HGF	3082	genome.wustl.edu	37	7	81346551	81346551	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	81346551	81346551	G	A	SNP	HGF	NM_000601.4	human	genbank	58_37c	-1	reviewed	missense	c.1402	p.R468C	1.000	HMMPfam_Kringle,HMMSmart_SM00130,superfamily_Kringle-like	HMMPfam_Kringle,HMMSmart_SM00130,HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_PAN_1,HMMSmart_SM00473,superfamily_Trypsin-like serine proteases,superfamily_Kringle-like,PatternScan_KRINGLE_1,superfamily_Hairpin loop containing domain-like	-	no_errors
HMHA1	23526	genome.wustl.edu	37	19	1079999	1079999	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	1079999	1079999	G	C	SNP	HMHA1	NM_012292.2	human	genbank	58_37c	+1	validated	missense	c.1585	p.E529Q	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMSmart_FCH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_Rho_GAP,superfamily_SSF57889	-	no_errors
HPDL	84842	genome.wustl.edu	37	1	45793452	45793452	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	45793452	45793452	G	T	SNP	HPDL	NM_032756.2	human	genbank	58_37c	+1	validated	missense	c.632	p.G211V	0.995	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	-	no_errors
HS3ST2	9956	genome.wustl.edu	37	16	22926832	22926832	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	22926832	22926832	G	A	SNP	HS3ST2	NM_006043.1	human	genbank	58_37c	+1	reviewed	silent	c.1053	p.P351	0.995	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	HMMPfam_Sulfotransfer_1,superfamily_SSF52540	-	no_errors
IDS	3423	genome.wustl.edu	37	X	148571918	148571918	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	X	148571918	148571918	G	T	SNP	IDS	NM_000202.5	human	genbank	58_37c	-1	reviewed	silent	c.933	p.V311	0.255	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like	HMMPfam_Sulfatase,PatternScan_SULFATASE_2,PatternScan_SULFATASE_1,superfamily_Alkaline phosphatase-like	-	no_errors
IFI16	3428	genome.wustl.edu	37	1	158984681	158984681	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	158984681	158984681	G	T	SNP	IFI16	NM_005531.2	human	genbank	58_37c	+1	reviewed	missense	c.211	p.D71Y	0.000	HMMPfam_PAAD_DAPIN,superfamily_DEATH_like	HMMPfam_PAAD_DAPIN,HMMPfam_HIN,superfamily_DEATH_like	-	no_errors
IFT140	9742	genome.wustl.edu	37	16	1633329	1633329	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	1633329	1633329	G	A	SNP	IFT140	NM_014714.3	human	genbank	58_37c	-1	validated	missense	c.1418	p.A473V	0.000	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40,superfamily_TPR-like	-	no_errors
INHBC	3626	genome.wustl.edu	37	12	57843320	57843320	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	57843320	57843320	C	T	SNP	INHBC	NM_005538.2	human	genbank	58_37c	+1	reviewed	nonsense	c.574	p.Q192*	1.000	NULL	HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1,superfamily_Cystine-knot cytokines	-	no_errors
JHDM1D	80853	genome.wustl.edu	37	7	139796372	139796372	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	139796372	139796372	T	G	SNP	JHDM1D	NM_030647.1	human	genbank	58_37c	-1	validated	missense	c.2357	p.D786A	0.244	NULL	HMMSmart_SM00249,HMMSmart_SM00558,superfamily_FYVE/PHD zinc finger,PatternScan_EGF_2,HMMPfam_JmjC,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_Clavaminate synthase-like	-	no_errors
KLF8	11279	genome.wustl.edu	37	X	56291989	56291989	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	X	56291989	56291989	G	T	SNP	KLF8	NM_007250.4	human	genbank	58_37c	+1	reviewed	missense	c.458	p.S153I	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
KRTAP4-9	85286	genome.wustl.edu	37	17	39240790	39240790	+	Missense_Mutation	SNP	G	G	A	rs11650261	byCluster;by1000genomes;byHapmap	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	39240790	39240790	G	A	SNP	KRTAP4-7	ENST00000377731	human	ensembl	58_37c	+1	known	missense	c.332	p.R111H	0.000	HMMPfam_Keratin_B2	PatternScan_TNFR_NGFR_1,HMMPfam_Keratin_B2	-	no_errors
LOC440518	440518	genome.wustl.edu	37	19	22780164	22780164	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	22780164	22780164	G	A	SNP	LOC440518	XR_041921.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.722	-	-	-	no_errors
MAP4K1	11184	genome.wustl.edu	37	19	39088168	39088168	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	39088168	39088168	C	T	SNP	MAP4K1	NM_007181.4	human	genbank	58_37c	-1	validated	missense	c.1736	p.G579E	0.162	HMMPfam_CNH,HMMSmart_CNH	HMMPfam_CNH,HMMSmart_CNH,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NAV3	89795	genome.wustl.edu	37	12	78570996	78570996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	78570996	78570996	G	A	SNP	NAV3	NM_014903.4	human	genbank	58_37c	+1	validated	missense	c.5200	p.E1734K	1.000	NULL	HMMPfam_CH,HMMSmart_SM00033,HMMSmart_SM00382,superfamily_Calponin-homology domain CH-domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NCKAP5	344148	genome.wustl.edu	37	2	133541246	133541246	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	2	133541246	133541246	G	A	SNP	NCKAP5	NM_207363.2	human	genbank	58_37c	-1	validated	silent	c.3138	p.P1046	0.029	NULL	NULL	-	no_errors
NCRNA00181	0	genome.wustl.edu	37	19	58863548	58863548	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	58863548	58863548	G	A	SNP	NCRNA00181	NR_015380.1	human	genbank	58_37c	+1	predicted	rna	NULL	NULL	0.000	-	-	-	no_errors
NIPAL1	152519	genome.wustl.edu	37	4	48027169	48027169	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	4	48027169	48027169	T	A	SNP	NIPAL1	NM_207330.1	human	genbank	58_37c	+1	provisional	missense	c.131	p.V44E	0.000	NULL	HMMPfam_DUF803,superfamily_SSF103481	-	no_errors
NMD3	51068	genome.wustl.edu	37	3	160952568	160952568	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	160952568	160952568	G	T	SNP	NMD3	NM_015938.3	human	genbank	58_37c	+1	provisional	missense	c.411	p.Q137H	1.000	HMMPfam_NMD3	HMMPfam_NMD3	-	no_errors
OR5I1	10798	genome.wustl.edu	37	11	55703345	55703345	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	55703345	55703345	G	A	SNP	OR5I1	NM_006637.1	human	genbank	58_37c	-1	reviewed	missense	c.532	p.H178Y	0.981	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PARP12	64761	genome.wustl.edu	37	7	139724642	139724642	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	139724642	139724642	G	T	SNP	PARP12	NM_022750.2	human	genbank	58_37c	-1	provisional	missense	c.1824	p.S608R	0.607	HMMPfam_PARP,superfamily_ADP-ribosylation	HMMPfam_zf-CCCH,HMMSmart_SM00356,HMMPfam_PARP,superfamily_ADP-ribosylation,superfamily_CCCH zinc finger	-	no_errors
PDE1B	5153	genome.wustl.edu	37	12	54967460	54967460	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	54967460	54967460	A	G	SNP	PDE1B	NM_000924.3	human	genbank	58_37c	+1	validated	missense	c.1031	p.K344R	1.000	HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_HDc,HMMPfam_PDEase_I_N,superfamily_SSF109604	-	no_errors
PGBD5	79605	genome.wustl.edu	37	1	230503753	230503757	+	Frame_Shift_Del	DEL	CCACG	CCACG	-	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	CCACG	CCACG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	230503753	230503757	CCACG	-	DEL	PGBD5	NM_024554.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.262_258	p.V87fs	0.005:0.000:0.000:0.000:0.000	NULL	NULL	-	no_errors
PIGR	5284	genome.wustl.edu	37	1	207107989	207107989	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	207107989	207107989	T	C	SNP	PIGR	NM_002644.3	human	genbank	58_37c	-1	reviewed	missense	c.1481	p.Y494C	1.000	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726	-	no_errors
POLI	11201	genome.wustl.edu	37	18	51797757	51797757	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	18	51797757	51797757	C	T	SNP	POLI	NM_007195.2	human	genbank	58_37c	+1	validated	missense	c.143	p.P48L	0.007	NULL	HMMPfam_IMS,superfamily_Lesion bypass DNA polymerase (Y-family) little finger domain,superfamily_DNA/RNA polymerases	-	no_errors
PRMT7	54496	genome.wustl.edu	37	16	68387405	68387405	+	Missense_Mutation	SNP	G	G	A	rs144149707	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	68387405	68387405	G	A	SNP	PRMT7	NM_019023.2	human	genbank	58_37c	+1	validated	missense	c.1586	p.R529Q	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
PTPRZ1	5803	genome.wustl.edu	37	7	121612627	121612627	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	121612627	121612627	A	T	SNP	PTPRZ1	NM_002851.2	human	genbank	58_37c	+1	reviewed	missense	c.337	p.S113C	1.000	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
RBM23	55147	genome.wustl.edu	37	14	23374660	23374660	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	14	23374660	23374660	T	C	SNP	RBM23	NM_001077351.1	human	genbank	58_37c	-1	reviewed	missense	c.458	p.E153G	1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RIF1	55183	genome.wustl.edu	37	2	152273161	152273161	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	2	152273161	152273161	A	G	SNP	RIF1	NM_018151.4	human	genbank	58_37c	+1	reviewed	missense	c.367	p.I123V	1.000	superfamily_ARM repeat	superfamily_ARM repeat,PatternScan_ABC_TRANSPORTER_1	-	no_errors
RTTN	25914	genome.wustl.edu	37	18	67759382	67759382	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	18	67759382	67759382	A	G	SNP	RTTN	NM_173630.3	human	genbank	58_37c	-1	validated	silent	c.4107	p.A1369	0.221	NULL	superfamily_ARM repeat	-	no_errors
SEZ6L2	26470	genome.wustl.edu	37	16	29899946	29899946	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	29899946	29899946	C	G	SNP	SEZ6L2	NM_201575.2	human	genbank	58_37c	-1	validated	silent	c.954	p.S318	0.685	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,superfamily_Complement control module/SCR domain	-	no_errors
SI	6476	genome.wustl.edu	37	3	164785127	164785127	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	164785127	164785127	C	T	SNP	SI	NM_001041.3	human	genbank	58_37c	-1	reviewed	splice_site	c.635+1	e5+1	1.000	-	-	-	no_errors
SYT11	23208	genome.wustl.edu	37	1	155838473	155838473	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	155838473	155838473	G	A	SNP	SYT11	NM_152280.4	human	genbank	58_37c	+1	reviewed	missense	c.752	p.R251H	1.000	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
TM4SF1	4071	genome.wustl.edu	37	3	149095219	149095219	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	149095219	149095219	G	C	SNP	TM4SF1	NM_014220.2	human	genbank	58_37c	-1	reviewed	missense	c.116	p.S39C	0.001	HMMPfam_L6_membrane	HMMPfam_L6_membrane	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577022	7577022	+	Nonsense_Mutation	SNP	G	A	A	rs121913344	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	7577022	7577022	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.916	p.R306*	1.000	NULL	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIP11	9321	genome.wustl.edu	37	14	92472173	92472173	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	14	92472173	92472173	A	G	SNP	TRIP11	NM_004239.3	human	genbank	58_37c	-1	reviewed	missense	c.2147	p.M716T	0.610	NULL	NULL	-	no_errors
WDFY3	23001	genome.wustl.edu	37	4	85648059	85648059	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	4	85648059	85648059	C	T	SNP	WDFY3	NM_014991.4	human	genbank	58_37c	-1	reviewed	silent	c.7227	p.E2409	0.997	superfamily_Cyclin-like	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,superfamily_Concanavalin A-like lectins/glucanases,superfamily_FYVE/PHD zinc finger,superfamily_Cyclin-like,superfamily_WD40 repeat-like,superfamily_ARM repeat,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
ZNF254	9534	genome.wustl.edu	37	19	24289416	24289416	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	24289416	24289416	A	G	SNP	ZNF254	NM_203282.2	human	genbank	58_37c	+1	validated	missense	c.224	p.K75R	0.014	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF419	79744	genome.wustl.edu	37	19	58004585	58004585	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	58004585	58004585	G	A	SNP	ZNF419	NM_001098491.1	human	genbank	58_37c	+1	validated	silent	c.663	p.Q221	0.087	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF502	91392	genome.wustl.edu	37	3	44762851	44762851	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	44762851	44762851	G	C	SNP	ZNF502	NM_001134440.1	human	genbank	58_37c	+1	validated	missense	c.542	p.R181T	0.747	superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF550	162972	genome.wustl.edu	37	19	58058369	58058369	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	58058369	58058369	G	A	SNP	ZNF550	NM_001039654.1	human	genbank	58_37c	-1	provisional	silent	c.1120	p.L374	0.023	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF658	26149	genome.wustl.edu	37	9	40774730	40774730	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	9	40774730	40774730	G	C	SNP	ZNF658	NM_033160.5	human	genbank	58_37c	-1	validated	missense	c.545	p.A182G	0.000	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
