Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	
ABCA10	10349	hgsc.bcm.edu;ucsc.edu	37	17	67186562	67186562	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
ALG12	79087	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	50303615	50303615	+	Silent	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
ALMS1	7840	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	73651718	73651718	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
AMHR2	269	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	53819616	53819616	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
C9orf66	157983	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	214612	214612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
CACNA1S	779	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	201047117	201047117	+	Silent	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
CCDC157	550631	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	30766353	30766353	+	Silent	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
CD22	933	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	35831892	35831892	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
CD300E	342510	broad.mit.edu;hgsc.bcm.edu	37	17	72613604	72613604	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
CMTM1	113540	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	66612797	66612797	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
COLEC12	81035	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	480713	480713	+	Silent	SNP	G	G	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
DCAF13	25879	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	104444966	104444966	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
DDR1	780	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	30866812	30866812	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
DISP1	84976	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	223178702	223178702	+	Silent	SNP	T	T	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
DNMT3A	1788	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	25467122	25467122	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
DRD2	1813	broad.mit.edu;hgsc.bcm.edu	37	11	113295088	113295088	+	Splice_Site	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
EMILIN1	11117	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	27305157	27305157	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
FLT4	2324	broad.mit.edu;hgsc.bcm.edu	37	5	180047687	180047687	+	Silent	SNP	G	G	A	rs139263798	alternate_allele	TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
GRM6	2916	hgsc.bcm.edu	37	5	178410194	178410195	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
KIAA0776	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	96997453	96997453	+	Silent	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
LAMB4	22798	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	107763582	107763582	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
LAMC1	3915	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	183086460	183086460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
LOXL4	84171	hgsc.bcm.edu;ucsc.edu	37	10	100018882	100018882	+	Missense_Mutation	SNP	G	G	C	rs151150208	alternate_allele	TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
M6PR	4074	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	9098098	9098098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
MAP3K15	389840	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	19410163	19410163	+	Silent	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
MIA3	375056	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	222826645	222826645	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
MS4A14	84689	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	60164109	60164109	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
NAV2	89797	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	20124911	20124911	+	Silent	SNP	G	G	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
NUP133	55746	broad.mit.edu;hgsc.bcm.edu	37	1	229602504	229602504	+	Splice_Site	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PBRM1	55193	hgsc.bcm.edu;ucsc.edu	37	3	52696277	52696278	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PCDHB14	56122	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	140604554	140604554	+	Missense_Mutation	SNP	C	C	T	rs150245283	bycluster;byfrequency;by1000genomes	TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PDZD8	118987	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	119049791	119049791	+	Silent	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PFKFB1	5207	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	54982603	54982603	+	Silent	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PFKM	5213	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	48516579	48516579	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PIGP	51227	broad.mit.edu;ucsc.edu	37	21	38444809	38444809	+	Nonsense_Mutation	SNP	C	A	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PLA2R1	22925	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	160813103	160813103	+	Silent	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
POLR2A	5430	hgsc.bcm.edu;ucsc.edu	37	17	7404417	7404417	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
PPHLN1	51535	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	42748967	42748967	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
RP1	6101	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	55539331	55539331	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
RUNDC2A	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	12136850	12136850	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SERPINF2	5345	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	1648687	1648687	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SFRP4	6424	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	37949276	37949276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SLC18A1	6570	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	20038369	20038369	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SLC22A10	387775	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	63057715	63057715	+	Silent	SNP	C	C	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SLC2A14	144195	broad.mit.edu;hgsc.bcm.edu	37	12	7967026	7967026	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SMCR7L	54471	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	39908345	39908345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SMG6	23293	broad.mit.edu;hgsc.bcm.edu	37	17	1964808	1964808	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SNRNP200	23020	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	96962717	96962717	+	Missense_Mutation	SNP	C	C	T	rs144219123		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SNX27	81609	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	151611585	151611585	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
STXBP5	134957	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	147685200	147685200	+	Silent	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
SUV39H1	6839	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	48557408	48557408	+	Silent	SNP	C	C	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
TEX11	56159	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	69942475	69942475	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
UGT2B4	7363	hgsc.bcm.edu	37	4	70359429	70359430	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
USHBP1	83878	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	17366335	17366335	+	Silent	SNP	G	G	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
VRK2	7444	broad.mit.edu;hgsc.bcm.edu	37	2	58313465	58313465	+	RNA	SNP	T	T	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
WDR35	57539	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	20138069	20138069	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
XIST	7503	broad.mit.edu;hgsc.bcm.edu	37	X	73068428	73068428	+	RNA	SNP	G	G	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
ZCCHC17	51538	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	31782970	31782970	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
ZNF680	340252	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	63981785	63981785	+	Silent	SNP	A	A	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
ZNF708	7562	broad.mit.edu;hgsc.bcm.edu	37	19	21492050	21492050	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
ZNF782	158431	broad.mit.edu;ucsc.edu	37	9	99580322	99580322	+	Silent	SNP	G	A	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
LRCH2	57631	broad.mit.edu	37	X	114400841	114400841	+	Nonsense_Mutation	SNP	C	A	A	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
STL	7955	broad.mit.edu	37	6	125233608	125233608	+	RNA	SNP	T	C	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
TMC3	342125	broad.mit.edu	37	15	81633742	81633742	+	Silent	SNP	A	G	G	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
Unknown	0	broad.mit.edu	37	15	76073205	76073205	+	Silent	SNP	C	T	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
Unknown	0	broad.mit.edu	37	16	70268080	70268080	+	RNA	SNP	T	C	C	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
UPF3A	65110	broad.mit.edu	37	13	115047559	115047559	+	Silent	SNP	C	T	T	novel		TCGA-B0-5120-01A-01D-1421-08	TCGA-B0-5120-11A-01D-1421-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6ce58fbc-6742-4ade-84b0-cd025266e030	b35280fe-dbfa-4e45-8f49-3d0489e68743	
