Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AASS	10157	genome.wustl.edu	37	7	121721545	121721553	+	Splice_Site	DEL	GTCACTCAC	GTCACTCAC	-	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	GTCACTCAC	GTCACTCAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	7	121721545	121721553	GTCACTCAC	-	DEL	AASS	NM_005763.3	human	genbank	58_37c	-1	reviewed	splice_site_del	c.2280+1_2280+1	e19+1	0.107:0.108:0.120:0.896:0.996:1.000:0.997:1.000:1.000	-	-	-	no_errors
ABCC12	94160	genome.wustl.edu	37	16	48173212	48173212	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	16	48173212	48173212	C	T	SNP	ABCC12	NM_033226.2	human	genbank	58_37c	-1	reviewed	silent	c.693	p.L231	1.000	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACACB	32	genome.wustl.edu	37	12	109617839	109617839	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	12	109617839	109617839	C	A	SNP	ACACB	NM_001093.3	human	genbank	58_37c	+1	reviewed	missense	c.1765	p.H589N	1.000	HMMPfam_CPSase_L_D2,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_Carboxyl_trans,HMMPfam_Biotin_lipoyl,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,HMMPfam_CPSase_L_chain,HMMPfam_Biotin_carb_C,superfamily_Single hybrid motif,superfamily_Rudiment single hybrid motif,HMMPfam_ACC_central,superfamily_PreATP-grasp domain,superfamily_ClpP/crotonase,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors
ACER3	55331	genome.wustl.edu	37	11	76572075	76572075	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	11	76572075	76572075	G	T	SNP	ACER3	NM_018367.5	human	genbank	58_37c	+1	validated	missense	c.55	p.D19Y	1.000	HMMPfam_aPHC	HMMPfam_aPHC	-	no_errors
ACVR2A	92	genome.wustl.edu	37	2	148657335	148657335	+	Silent	SNP	T	T	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	2	148657335	148657335	T	G	SNP	ACVR2A	NM_001616.3	human	genbank	58_37c	+1	reviewed	silent	c.396	p.P132	0.997	NULL	HMMPfam_Activin_recp,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,superfamily_Snake toxin-like	-	no_errors
AIPL1	23746	genome.wustl.edu	37	17	6337305	6337305	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	6337305	6337305	C	A	SNP	AIPL1	NM_014336.3	human	genbank	58_37c	-1	reviewed	missense	c.210	p.E70D	1.000	superfamily_SSF54534	superfamily_SSF48452,superfamily_SSF54534	-	no_errors
AKAP12	9590	genome.wustl.edu	37	6	151674861	151674861	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	151674861	151674861	C	T	SNP	AKAP12	NM_005100.3	human	genbank	58_37c	+1	reviewed	missense	c.5335	p.L1779F	0.008	NULL	HMMPfam_WSK,HMMPfam_RII_binding_1	-	no_errors
ALDH3B2	222	genome.wustl.edu	37	11	67431876	67431876	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	11	67431876	67431876	G	T	SNP	ALDH3B2	NM_000695.3	human	genbank	58_37c	-1	reviewed	missense	c.864	p.N288K	0.370	HMMPfam_Aldedh,superfamily_ALDH-like	HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_ALDH-like	-	no_errors
ASH2L	9070	genome.wustl.edu	37	8	37972459	37972459	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	8	37972459	37972459	C	A	SNP	ASH2L	NM_004674.3	human	genbank	58_37c	+1	validated	missense	c.718	p.P240T	1.000	NULL	HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
ASPH	444	genome.wustl.edu	37	8	62479849	62479851	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	8	62479849	62479851	CTC	-	DEL	ASPH	NM_004318.3	human	genbank	58_37c	-1	reviewed	in_frame_del	c.1178_1176	p.R393in_frame_del	1.000:1.000:0.998	superfamily_SSF48452	HMMPfam_Asp_Arg_Hydrox,HMMPfam_Asp-B-Hydro_N,superfamily_SSF48452,superfamily_SSF51197	-	no_errors
ATP9B	374868	genome.wustl.edu	37	18	77037109	77037109	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	18	77037109	77037109	G	C	SNP	ATP9B	NM_198531.3	human	genbank	58_37c	+1	validated	missense	c.1324	p.D442H	1.000	HMMPfam_E1-E2_ATPase	HMMPfam_Hydrolase,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
BTN3A3	10384	genome.wustl.edu	37	6	26448491	26448491	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	26448491	26448491	G	C	SNP	BTN3A3	NM_006994.4	human	genbank	58_37c	+1	validated	missense	c.731	p.S244T	0.000	superfamily_SSF48726	HMMSmart_IG,HMMPfam_SPRY,HMMSmart_PRY,HMMPfam_V-set,HMMSmart_SPRY,superfamily_SSF48726	-	no_errors
C14orf21	161424	genome.wustl.edu	37	14	24769849	24769850	+	In_Frame_Ins	INS	-	-	GAGGAGGAG	rs34335779	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	14	24769849	24769850	-	GAGGAGGAG	INS	C14orf21	NM_174913.1	human	genbank	58_37c	+1	provisional	in_frame_ins	c.483_484	p.165in_frame_insEEE	0.000:0.015	superfamily_ARM-type_fold	HMMPfam_PUF,HMMSmart_Pumilio,superfamily_ARM-type_fold	-	no_errors
C2	717	genome.wustl.edu	37	6	31895941	31895941	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	31895941	31895941	C	T	SNP	C2	NM_000063.4	human	genbank	58_37c	+1	reviewed	missense	c.256	p.P86S	1.000	superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Trypsin,HMMSmart_SM00020,HMMPfam_VWA,HMMSmart_SM00327,superfamily_Trypsin-like serine proteases,superfamily_Complement control module/SCR domain,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_vWA-like	-	no_errors
CASKIN2	57513	genome.wustl.edu	37	17	73502696	73502696	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	73502696	73502696	C	A	SNP	CASKIN2	NM_020753.3	human	genbank	58_37c	-1	validated	missense	c.585	p.L195F	1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_SAM/Pointed domain,HMMPfam_SH3_2	-	no_errors
CBX3	11335	genome.wustl.edu	37	7	26248127	26248127	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	7	26248127	26248127	A	G	SNP	CBX3	ENST00000409747	human	ensembl	58_37c	+1	known	missense	c.209	p.Y70C	1.000	HMMSmart_CHROMO	HMMPfam_Chromo,HMMSmart_CHROMO,superfamily_Chromodomain-like	-	no_errors
CD163	9332	genome.wustl.edu	37	12	7640285	7640285	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	12	7640285	7640285	G	C	SNP	CD163	ENST00000396620	human	ensembl	58_37c	-1	known	missense	c.1819	p.P607A	0.105	NULL	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like	-	no_errors
CECR2	27443	genome.wustl.edu	37	22	18020472	18020472	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	22	18020472	18020472	C	A	SNP	CECR2	ENST00000400573	human	ensembl	58_37c	+1	known	missense	c.1801	p.P601T	0.144	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
CEP250	11190	genome.wustl.edu	37	20	34054871	34054871	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	20	34054871	34054871	C	T	SNP	CEP250	NM_007186.3	human	genbank	58_37c	+1	reviewed	silent	c.573	p.F191	1.000	NULL	superfamily_Prefoldin	-	no_errors
COL10A1	1300	genome.wustl.edu	37	6	116443059	116443059	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	116443059	116443059	G	A	SNP	COL10A1	NM_000493.3	human	genbank	58_37c	-1	reviewed	missense	c.220	p.P74S	0.976	HMMPfam_Collagen	HMMPfam_C1q,HMMSmart_SM00110,HMMPfam_Collagen,superfamily_TNF-like	-	no_errors
COL25A1	84570	genome.wustl.edu	37	4	109767306	109767307	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	4	109767306	109767307	-	T	INS	COL25A1	NM_198721.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1504_1503	p.P501fs	1.000:0.985	HMMPfam_Collagen	HMMPfam_Collagen	-	no_errors
COL6A2	1292	genome.wustl.edu	37	21	47552440	47552440	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	21	47552440	47552440	G	A	SNP	COL6A2	NM_001849.3	human	genbank	58_37c	+1	reviewed	missense	c.3034	p.D1012N	1.000	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Collagen,superfamily_vWA-like	-	no_errors
CTNNB1	1499	genome.wustl.edu	37	3	41266593	41266593	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	3	41266593	41266593	G	A	SNP	CTNNB1	NM_001098209.1	human	genbank	58_37c	+1	reviewed	silent	c.390	p.Q130	1.000	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
DAAM2	23500	genome.wustl.edu	37	6	39869637	39869637	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	39869637	39869637	C	A	SNP	DAAM2	NM_015345.2	human	genbank	58_37c	+1	validated	missense	c.3028	p.L1010M	0.011	HMMSmart_SM00498	HMMSmart_SM00498,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)	-	no_errors
DNAH17	8632	genome.wustl.edu	37	17	76492022	76492022	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	76492022	76492022	G	A	SNP	DNAH17	ENST00000389840	human	ensembl	58_37c	-1	known	silent	c.5796	p.F1932	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,PatternScan_WD_REPEATS_1,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAJC10	54431	genome.wustl.edu	37	2	183608386	183608386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	2	183608386	183608386	C	T	SNP	DNAJC10	NM_018981.1	human	genbank	58_37c	+1	provisional	missense	c.1253	p.P418L	1.000	superfamily_Thioredoxin-like	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain,superfamily_Thioredoxin-like,HMMPfam_Thioredoxin,PatternScan_THIOREDOXIN_1	-	no_errors
DSE	29940	genome.wustl.edu	37	6	116720652	116720652	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	116720652	116720652	C	A	SNP	DSE	NM_001080976.1	human	genbank	58_37c	+1	reviewed	missense	c.239	p.S80Y	1.000	NULL	NULL	-	no_errors
DUPD1	338599	genome.wustl.edu	37	10	76797815	76797815	+	Missense_Mutation	SNP	C	C	T	rs190150687	by1000genomes	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	10	76797815	76797815	C	T	SNP	DUPD1	NM_001003892.1	human	genbank	58_37c	-1	provisional	missense	c.442	p.V148I	0.989	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
EDAR	10913	genome.wustl.edu	37	2	109513664	109513664	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	2	109513664	109513664	G	A	SNP	EDAR	NM_022336.3	human	genbank	58_37c	-1	reviewed	missense	c.1046	p.P349L	1.000	superfamily_DEATH_like	HMMPfam_Death,PatternScan_TNFR_NGFR_1,superfamily_DEATH_like	-	no_errors
EHD4	30844	genome.wustl.edu	37	15	42192879	42192879	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	15	42192879	42192879	G	A	SNP	EHD4	NM_139265.3	human	genbank	58_37c	-1	validated	silent	c.1590	p.P530	0.886	HMMSmart_EH,superfamily_SSF47473	HMMSmart_EH,HMMPfam_Dynamin_N,PatternScan_EF_HAND_1,superfamily_SSF47473,superfamily_SSF52540	-	no_errors
EMR2	30817	genome.wustl.edu	37	19	14883280	14883280	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	19	14883280	14883280	C	G	SNP	EMR2	NM_013447.2	human	genbank	58_37c	-1	reviewed	missense	c.229	p.V77L	0.000	HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_G_PROTEIN_RECEP_F2_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
EPHA3	2042	genome.wustl.edu	37	3	89478293	89478300	+	Frame_Shift_Del	DEL	TGGTTCCT	TGGTTCCT	-	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	TGGTTCCT	TGGTTCCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	3	89478293	89478300	TGGTTCCT	-	DEL	EPHA3	NM_005233.5	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.2112_2119	p.S706fs	1.000:1.000:1.000:0.891:1.000:1.000:0.945:0.987	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMSmart_SM00454,HMMSmart_SM00220,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,superfamily_Fibronectin type III,superfamily_Galactose-binding domain-like,superfamily_SAM/Pointed domain,superfamily_Protein kinase-like (PK-like),HMMPfam_SAM_2,PatternScan_EGF_2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
F13A1	2162	genome.wustl.edu	37	6	6145994	6145994	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	6145994	6145994	G	T	SNP	F13A1	NM_000129.3	human	genbank	58_37c	-1	reviewed	missense	c.2057	p.P686H	1.000	HMMPfam_Transglut_C,superfamily_Transglut_C	HMMPfam_Transglut_N,HMMPfam_Transglut_core,HMMSmart_TGc,HMMPfam_Transglut_C,superfamily_Transglut_C,PatternScan_TRANSGLUTAMINASES,superfamily_Ig_E-set,superfamily_SSF54001	-	no_errors
F5	2153	genome.wustl.edu	37	1	169511020	169511020	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	169511020	169511020	T	C	SNP	F5	NM_000130.4	human	genbank	58_37c	-1	reviewed	missense	c.3308	p.N1103S	0.000	NULL	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,PatternScan_FA58C_2,PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxins,superfamily_Galactose-binding domain-like,HMMPfam_LSPR,HMMPfam_Cu-oxidase_3	-	no_errors
FLG	2312	genome.wustl.edu	37	1	152283132	152283132	+	Silent	SNP	C	C	A	rs138166932	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	152283132	152283132	C	A	SNP	FLG	NM_002016.1	human	genbank	58_37c	-1	reviewed	silent	c.4230	p.V1410	0.000	NULL	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
FMR1	2332	genome.wustl.edu	37	X	147026507	147026507	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	X	147026507	147026507	C	T	SNP	FMR1	NM_002024.5	human	genbank	58_37c	+1	reviewed	silent	c.1590	p.D530	0.972	NULL	HMMSmart_SM00322,HMMPfam_Agenet,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors
GPR84	53831	genome.wustl.edu	37	12	54756651	54756651	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	12	54756651	54756651	C	G	SNP	GPR84	NM_020370.2	human	genbank	58_37c	-1	validated	missense	c.985	p.A329P	0.718	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
HMCN1	83872	genome.wustl.edu	37	1	185815169	185815169	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	185815169	185815169	G	C	SNP	HMCN1	NM_031935.2	human	genbank	58_37c	+1	reviewed	missense	c.280	p.V94L	1.000	superfamily_vWA-like	PatternScan_ASX_HYDROXYL,PatternScan_CECROPIN,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00179,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_G2F,HMMSmart_SM00682,superfamily_GFP-like,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_I-set,HMMPfam_ig,PatternScan_EGF_CA,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
HMCN1	83872	genome.wustl.edu	37	1	186135346	186135346	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	186135346	186135346	G	T	SNP	HMCN1	NM_031935.2	human	genbank	58_37c	+1	reviewed	missense	c.15350	p.C5117F	1.000	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,PatternScan_CECROPIN,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00179,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_G2F,HMMSmart_SM00682,superfamily_GFP-like,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_I-set,HMMPfam_ig,PatternScan_EGF_CA,superfamily_Immunoglobulin,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
HMGCS1	3157	genome.wustl.edu	37	5	43298903	43298903	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	5	43298903	43298903	C	T	SNP	HMGCS1	NM_001098272.1	human	genbank	58_37c	-1	validated	silent	c.165	p.K55	1.000	HMMPfam_HMG_CoA_synt_N,superfamily_Thiolase-like	PatternScan_HMG_COA_SYNTHASE,HMMPfam_HMG_CoA_synt_N,HMMPfam_HMG_CoA_synt_C,superfamily_Thiolase-like	-	no_errors
INPP4A	3631	genome.wustl.edu	37	2	99189391	99189391	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	2	99189391	99189391	G	A	SNP	INPP4A	NM_001134224.1	human	genbank	58_37c	+1	reviewed	splice_site	c.2646+1	e22+1	1.000	-	-	-	no_errors
KCNH3	23416	genome.wustl.edu	37	12	49951310	49951310	+	Silent	SNP	T	T	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	12	49951310	49951310	T	G	SNP	KCNH3	NM_012284.1	human	genbank	58_37c	+1	validated	silent	c.2826	p.T942	0.841	NULL	HMMSmart_PAS,HMMPfam_cNMP_binding,HMMSmart_cNMP,HMMSmart_PAC,HMMPfam_Ion_trans,HMMPfam_PAS,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cNMP_binding,superfamily_SSF55785,superfamily_SSF81324	-	no_errors
KIF13A	63971	genome.wustl.edu	37	6	17856279	17856279	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	17856279	17856279	A	T	SNP	KIF13A	NM_022113.4	human	genbank	58_37c	-1	validated	missense	c.295	p.F99I	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_FHA,HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_SMAD/FHA domain,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIF13A	63971	genome.wustl.edu	37	6	17987307	17987307	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	17987307	17987307	A	G	SNP	KIF13A	NM_022113.4	human	genbank	58_37c	-1	validated	missense	c.124	p.S42P	0.959	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_FHA,HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_SMAD/FHA domain,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LMNB1	4001	genome.wustl.edu	37	5	126146015	126146015	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	5	126146015	126146015	G	C	SNP	LMNB1	NM_005573.2	human	genbank	58_37c	+1	reviewed	missense	c.786	p.E262D	0.977	HMMPfam_Filament	HMMPfam_IF_tail,HMMPfam_Filament,PatternScan_IF,superfamily_Lamin A/C globular tail domain	-	no_errors
LOC100287244	0	genome.wustl.edu	37	17	20908098	20908116	+	Frame_Shift_Del	DEL	AGCCAATAGTGGAGCTGCG	AGCCAATAGTGGAGCTGCG	-	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	AGCCAATAGTGGAGCTGCG	AGCCAATAGTGGAGCTGCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	20908098	20908116	AGCCAATAGTGGAGCTGCG	-	DEL	LOC100287244	XM_002343484.1	human	genbank	58_37c	+1	model	frame_shift_del	c.405_423	p.N137fs	0.001:0.001:0.001:0.000:0.000:0.000:0.010:0.020:0.030:0.040:0.049:0.058:0.067:0.075:0.083:0.091:0.099:0.107:0.114	NULL	NULL	-	no_errors
LOC100287244	0	genome.wustl.edu	37	17	20908116	20908116	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	20908116	20908116	G	C	SNP	LOC100287244	XM_002343484.1	human	genbank	58_37c	+1	model	silent	c.423	p.A141	0.114	NULL	NULL	-	no_errors
LOC283398	283398	genome.wustl.edu	37	12	94942076	94942076	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	12	94942076	94942076	C	T	SNP	LOC283398	XM_208658.8	human	genbank	58_37c	+1	model	silent	c.396	p.P132	0.030	NULL	HMMPfam_Ligase_CoA,HMMPfam_ATP-grasp_2,superfamily_Succinyl-CoA synthetase domains,PatternScan_SUCCINYL_COA_LIG_3,superfamily_Glutathione synthetase ATP-binding domain-like	-	pseudogene
LPHN3	23284	genome.wustl.edu	37	4	62936563	62936563	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	4	62936563	62936563	C	A	SNP	LPHN3	NM_015236.4	human	genbank	58_37c	+1	reviewed	missense	c.4347	p.N1449K	1.000	HMMPfam_Latrophilin	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_Gal_Lectin,HMMPfam_HRM,HMMSmart_SM00008,HMMPfam_OLF,HMMSmart_SM00284,HMMPfam_Latrophilin,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_Family A G protein-coupled receptor-like	-	no_errors
LRRN2	10446	genome.wustl.edu	37	1	204587204	204587204	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	204587204	204587204	G	C	SNP	LRRN2	NM_006338.2	human	genbank	58_37c	-1	reviewed	silent	c.1917	p.V639	0.777	NULL	HMMPfam_LRRCT,HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMSmart_SM00365,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
MARK2	2011	genome.wustl.edu	37	11	63665731	63665731	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	11	63665731	63665731	G	C	SNP	MARK2	NM_001039469.2	human	genbank	58_37c	+1	reviewed	missense	c.217	p.V73L	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMPfam_UBA,HMMPfam_KA1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMSmart_UBA,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_SSF103243	-	no_errors
MCF2	4168	genome.wustl.edu	37	X	138689912	138689912	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	X	138689912	138689912	C	T	SNP	MCF2	NM_001099855.1	human	genbank	58_37c	-1	reviewed	silent	c.1608	p.E536	1.000	NULL	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain,HMMSmart_SEC14,PatternScan_DH_1,HMMPfam_PH,HMMSmart_PH,HMMSmart_SPEC,superfamily_Spectrin,superfamily_SSF50729	-	no_errors
MCHR2	84539	genome.wustl.edu	37	6	100368976	100368976	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	100368976	100368976	T	C	SNP	MCHR2	NM_001040179.1	human	genbank	58_37c	-1	validated	missense	c.863	p.Y288C	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
MGAT5B	146664	genome.wustl.edu	37	17	74900382	74900395	+	Frame_Shift_Del	DEL	GTGGACGGCACCGA	GTGGACGGCACCGA	-	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	GTGGACGGCACCGA	GTGGACGGCACCGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	74900382	74900395	GTGGACGGCACCGA	-	DEL	MGAT5B	NM_198955.1	human	genbank	58_37c	+1	validated	frame_shift_del	c.601_614	p.D202fs	1.000:1.000:1.000:1.000:1.000:0.988:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000	NULL	NULL	-	no_errors
MIA3	375056	genome.wustl.edu	37	1	222818914	222818914	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	222818914	222818914	G	C	SNP	MIA3	NM_198551.2	human	genbank	58_37c	+1	validated	missense	c.3496	p.D1166H	1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_2	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151945140	151945140	+	Silent	SNP	C	C	T	rs57648310	byCluster;byFrequency	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	7	151945140	151945140	C	T	SNP	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	silent	c.2379	p.S793	0.042	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MUC12	10071	genome.wustl.edu	37	7	100635586	100635586	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	7	100635586	100635586	A	T	SNP	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	missense	c.2171	p.H724L	0.002	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
NCF2	4688	genome.wustl.edu	37	1	183543637	183543637	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	183543637	183543637	C	G	SNP	NCF2	NM_000433.3	human	genbank	58_37c	-1	reviewed	silent	c.486	p.A162	1.000	superfamily_SSF48452	HMMPfam_PB1,HMMSmart_PB1,HMMPfam_TPR_1,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMSmart_TPR,superfamily_SSF48452,superfamily_SSF54277	-	no_errors
NFE2L1	4779	genome.wustl.edu	37	17	46136186	46136186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	46136186	46136186	C	T	SNP	NFE2L1	NM_003204.2	human	genbank	58_37c	+1	validated	missense	c.1502	p.S501F	0.774	NULL	HMMSmart_SM00338,PatternScan_BZIP_BASIC,superfamily_A DNA-binding domain in eukaryotic transcription factors,HMMPfam_bZIP_2	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228559643	228559643	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	228559643	228559643	C	A	SNP	OBSCN	NM_001098623.1	human	genbank	58_37c	+1	reviewed	missense	c.21164	p.P7055Q	0.000	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
OPRM1	4988	genome.wustl.edu	37	6	154412258	154412258	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	154412258	154412258	A	G	SNP	OPRM1	NM_001145279.1	human	genbank	58_37c	+1	reviewed	missense	c.1094	p.E365G	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PAX1	5075	genome.wustl.edu	37	20	21687302	21687302	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	20	21687302	21687302	C	A	SNP	PAX1	NM_006192.3	human	genbank	58_37c	+1	validated	silent	c.513	p.R171	0.131	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like	HMMPfam_PAX,HMMSmart_SM00351,PatternScan_PAIRED_1,superfamily_Homeodomain-like	-	no_errors
PCDHGA1	56114	genome.wustl.edu	37	5	140712321	140712321	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	5	140712321	140712321	T	A	SNP	PCDHGA1	NM_018912.2	human	genbank	58_37c	+1	reviewed	silent	c.2070	p.T690	0.061	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PHB	5245	genome.wustl.edu	37	17	47486378	47486378	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	47486378	47486378	C	G	SNP	PHB	ENST00000393345	human	ensembl	58_37c	-1	known	missense	c.536	p.R179T	0.002	HMMPfam_Band_7,HMMSmart_PHB	HMMPfam_Band_7,HMMSmart_PHB	-	no_errors
PLXNB2	23654	genome.wustl.edu	37	22	50717396	50717396	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	22	50717396	50717396	C	T	SNP	PLXNB2	NM_012401.2	human	genbank	58_37c	-1	validated	silent	c.4434	p.P1478	0.000	superfamily_Rho_GAP,HMMPfam_Plexin_cytopl	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMPfam_PSI,HMMPfam_TIG,HMMSmart_IPT,HMMSmart_PSI,superfamily_Rho_GAP,HMMPfam_Plexin_cytopl,superfamily_Ig_E-set,superfamily_Plexin-like_fold	-	no_errors
PMFBP1	83449	genome.wustl.edu	37	16	72198814	72198814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	16	72198814	72198814	G	A	SNP	PMFBP1	NM_031293.2	human	genbank	58_37c	-1	validated	missense	c.14	p.A5V	0.003	NULL	NULL	-	no_errors
PPARGC1B	133522	genome.wustl.edu	37	5	149200117	149200117	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	5	149200117	149200117	A	C	SNP	PPARGC1B	NM_133263.3	human	genbank	58_37c	+1	reviewed	missense	c.200	p.N67T	0.051	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RGS17	26575	genome.wustl.edu	37	6	153332893	153332893	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	153332893	153332893	C	G	SNP	RGS17	NM_012419.4	human	genbank	58_37c	-1	reviewed	missense	c.449	p.S150T	1.000	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam	-	no_errors
RLN1	6013	genome.wustl.edu	37	9	5335559	5335559	+	Missense_Mutation	SNP	T	T	C	rs143938299	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	9	5335559	5335559	T	C	SNP	RLN1	NM_006911.2	human	genbank	58_37c	-1	reviewed	missense	c.250	p.I84V	0.000	HMMPfam_Insulin,HMMSmart_SM00078,superfamily_Insulin-like	HMMPfam_Insulin,PatternScan_INSULIN,HMMSmart_SM00078,superfamily_Insulin-like	-	no_errors
SAMD3	154075	genome.wustl.edu	37	6	130475973	130475973	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	130475973	130475973	A	C	SNP	SAMD3	NM_001017373.2	human	genbank	58_37c	-1	validated	nonsense	c.1020	p.Y340*	1.000	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	-	no_errors
SERTAD3	29946	genome.wustl.edu	37	19	40947491	40947491	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	19	40947491	40947491	G	A	SNP	SERTAD3	NM_013368.3	human	genbank	58_37c	-1	reviewed	missense	c.497	p.A166V	0.246	NULL	HMMPfam_SERTA	-	no_errors
SI	6476	genome.wustl.edu	37	3	164727132	164727132	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	3	164727132	164727132	C	G	SNP	SI	NM_001041.3	human	genbank	58_37c	-1	reviewed	missense	c.4114	p.E1372Q	0.902	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2,HMMPfam_Trefoil,HMMSmart_SM00018,superfamily_Trefoil,superfamily_(Trans)glycosidases,PatternScan_P_TREFOIL	-	no_errors
SIN3B	23309	genome.wustl.edu	37	19	16982088	16982097	+	Frame_Shift_Del	DEL	GGAGCCTGCT	GGAGCCTGCT	-	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	GGAGCCTGCT	GGAGCCTGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	19	16982088	16982097	GGAGCCTGCT	-	DEL	SIN3B	NM_015260.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.2567_2576	p.S857fs	1.000:0.842:0.999:1.000:1.000:1.000:1.000:0.990:1.000:1.000	NULL	HMMPfam_PAH,superfamily_PAH2 domain,HMMPfam_HDAC_interact,HMMSmart_SM00761	-	no_errors
SLC18A2	6571	genome.wustl.edu	37	10	119017348	119017348	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	10	119017348	119017348	G	A	SNP	SLC18A2	NM_003054.4	human	genbank	58_37c	+1	reviewed	silent	c.936	p.E312	1.000	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SLC38A9	153129	genome.wustl.edu	37	5	54965418	54965418	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	5	54965418	54965418	T	C	SNP	SLC38A9	NM_173514.2	human	genbank	58_37c	-1	validated	silent	c.399	p.T133	1.000	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
SLCO6A1	133482	genome.wustl.edu	37	5	101834402	101834402	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	5	101834402	101834402	C	T	SNP	SLCO6A1	NM_173488.3	human	genbank	58_37c	-1	validated	silent	c.147	p.R49	0.000	NULL	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors	-	no_errors
SOCS6	9306	genome.wustl.edu	37	18	67992965	67992965	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	18	67992965	67992965	T	A	SNP	SOCS6	NM_004232.3	human	genbank	58_37c	+1	reviewed	missense	c.1061	p.V354D	1.000	NULL	HMMPfam_SH2,HMMSmart_SH2,HMMPfam_SOCS_box,HMMSmart_SOCS,superfamily_SSF55550	-	no_errors
SPIRE1	56907	genome.wustl.edu	37	18	12452354	12452354	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	18	12452354	12452354	T	C	SNP	SPIRE1	NM_001128626.1	human	genbank	58_37c	-1	validated	missense	c.1912	p.I638V	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00750	-	no_errors
SPPL3	121665	genome.wustl.edu	37	12	121248621	121248621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	12	121248621	121248621	C	T	SNP	SPPL3	NM_139015.3	human	genbank	58_37c	-1	validated	missense	c.92	p.G31D	1.000	NULL	HMMSmart_SM00730,HMMPfam_Peptidase_A22B	-	no_errors
TADA2B	93624	genome.wustl.edu	37	4	7056404	7056404	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	4	7056404	7056404	C	G	SNP	TADA2B	NM_152293.2	human	genbank	58_37c	+1	validated	missense	c.886	p.R296G	1.000	NULL	HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
THBS1	7057	genome.wustl.edu	37	15	39880727	39880727	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	15	39880727	39880727	T	A	SNP	THBS1	NM_003246.2	human	genbank	58_37c	+1	reviewed	missense	c.1472	p.I491N	1.000	superfamily_TSP-1 type 1 repeat	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00179,HMMSmart_SM00210,HMMPfam_TSP_3,HMMPfam_EGF,HMMSmart_SM00181,HMMPfam_TSP_C,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_2,superfamily_TSP type-3 repeat,superfamily_EGF/Laminin	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7579458	7579459	+	Frame_Shift_Ins	INS	-	-	TGCA	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	17	7579458	7579459	-	TGCA	INS	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.229_228	p.P76fs	0.000:0.000	NULL	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TULP4	56995	genome.wustl.edu	37	6	158915879	158915879	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	6	158915879	158915879	G	T	SNP	TULP4	NM_020245.3	human	genbank	58_37c	+1	validated	splice_site	c.1870+1	e11+1	1.000	-	-	-	no_errors
UBE3C	9690	genome.wustl.edu	37	7	157016026	157016026	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	7	157016026	157016026	C	T	SNP	UBE3C	NM_014671.2	human	genbank	58_37c	+1	validated	missense	c.2081	p.P694L	0.998	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	-	no_errors
UGGT2	55757	genome.wustl.edu	37	13	96536771	96536771	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	13	96536771	96536771	C	G	SNP	UGGT2	NM_020121.3	human	genbank	58_37c	-1	validated	missense	c.3202	p.D1068H	1.000	HMMPfam_UDP-g_GGTase	HMMPfam_UDP-g_GGTase,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
ZBTB20	26137	genome.wustl.edu	37	3	114069805	114069805	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	3	114069805	114069805	T	G	SNP	ZBTB20	NM_015642.4	human	genbank	58_37c	-1	validated	missense	c.901	p.S301R	1.000	NULL	HMMSmart_BTB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZBTB40	9923	genome.wustl.edu	37	1	22835081	22835081	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	1	22835081	22835081	C	G	SNP	ZBTB40	NM_001083621.1	human	genbank	58_37c	+1	validated	nonsense	c.1556	p.S519*	1.000	NULL	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZFP28	140612	genome.wustl.edu	37	19	57066120	57066120	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	19	57066120	57066120	C	G	SNP	ZFP28	NM_020828.1	human	genbank	58_37c	+1	provisional	missense	c.1966	p.Q656E	0.954	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZIM2	23619	genome.wustl.edu	37	19	57286204	57286204	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	19	57286204	57286204	G	T	SNP	ZIM2	NM_015363.4	human	genbank	58_37c	-1	reviewed	nonsense	c.1436	p.S479*	0.040	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZMYND17	118490	genome.wustl.edu	37	10	75184874	75184874	+	Missense_Mutation	SNP	G	G	A	rs187851673	by1000genomes	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	10	75184874	75184874	G	A	SNP	ZMYND17	NM_001024593.1	human	genbank	58_37c	-1	validated	missense	c.1145	p.T382I	0.998	NULL	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1	-	no_errors
ZNF778	197320	genome.wustl.edu	37	16	89293296	89293296	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18Q-01A-12D-A12B-09	TCGA-BH-A18Q-11A-34D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a4de6680-33c3-4f6f-8696-453470a00bcb	7a579f39-1175-4207-a069-b49b9cd87782	16	89293296	89293296	G	C	SNP	ZNF778	NM_182531.2	human	genbank	58_37c	+1	validated	missense	c.516	p.L172F	0.000	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
