Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ARHGAP17	55114	genome.wustl.edu	37	16	24942551	24942551	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	16	24942551	24942551	G	A	SNP	ARHGAP17	NM_001006634.1	human	genbank	58_37c	-1	validated	missense	c.2069	p.S690F	0.003	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_BAR,HMMSmart_SM00721,superfamily_GTPase activation domain GAP	-	no_errors
BBS5	129880	genome.wustl.edu	37	2	170343618	170343618	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	2	170343618	170343618	C	T	SNP	BBS5	NM_152384.2	human	genbank	58_37c	+1	reviewed	missense	c.182	p.S61F	1.000	HMMPfam_DUF1448,HMMSmart_SM00683	HMMPfam_DUF1448,HMMSmart_SM00683	-	no_errors
BMP2	650	genome.wustl.edu	37	20	6758938	6758938	+	Missense_Mutation	SNP	A	A	T	rs140417301	byCluster;by1000genomes	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	20	6758938	6758938	A	T	SNP	BMP2	NM_001200.2	human	genbank	58_37c	+1	reviewed	missense	c.393	p.R131S	1.000	HMMPfam_TGFb_propeptide	HMMPfam_TGFb_propeptide,HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1,superfamily_SSF57501	-	no_errors
C11orf21	29125	genome.wustl.edu	37	11	2321978	2321978	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	11	2321978	2321978	C	G	SNP	C11orf21	NM_001142946.1	human	genbank	58_37c	-1	predicted	missense	c.127	p.D43H	0.002	NULL	NULL	-	no_errors
C12orf64	283310	genome.wustl.edu	37	12	80730728	80730728	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	12	80730728	80730728	A	G	SNP	C12orf64	XM_002343203.1	human	genbank	58_37c	+1	model	missense	c.4495	p.K1499E	1.000	HMMPfam_VWD,HMMSmart_SM00216	HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,HMMSmart_SM00215,superfamily_AbfB domain (Pfam 05270),HMMPfam_C8	-	no_errors
C1orf173	127254	genome.wustl.edu	37	1	75078444	75078444	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	1	75078444	75078444	G	A	SNP	C1orf173	NM_001002912.4	human	genbank	58_37c	-1	validated	silent	c.1050	p.L350	1.000	NULL	NULL	-	no_errors
C20orf95	343578	genome.wustl.edu	37	20	37270404	37270404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	20	37270404	37270404	C	T	SNP	C20orf95	ENST00000373345	human	ensembl	58_37c	+1	known	missense	c.1156	p.H386Y	0.965	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
C6orf134	79969	genome.wustl.edu	37	6	30595007	30595007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	6	30595007	30595007	C	T	SNP	C6orf134	ENST00000330083	human	ensembl	58_37c	+1	known	silent	c.27	p.F9	0.001	NULL	HMMPfam_DUF738	-	no_errors
C8orf48	157773	genome.wustl.edu	37	8	13425043	13425043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	8	13425043	13425043	G	A	SNP	C8orf48	NM_001007090.2	human	genbank	58_37c	+1	validated	missense	c.543	p.M181I	0.000	NULL	NULL	-	no_errors
CCT6B	10693	genome.wustl.edu	37	17	33278998	33278998	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	17	33278998	33278998	C	G	SNP	CCT6B	NM_006584.2	human	genbank	58_37c	-1	reviewed	missense	c.585	p.E195D	1.000	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL-intermediate domain like	PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like	-	no_errors
CLDN24	0	genome.wustl.edu	37	4	184243151	184243151	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	4	184243151	184243151	C	G	SNP	CLDN24	XM_001714660.1	human	genbank	58_37c	-1	model	missense	c.429	p.K143N	0.186	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors
COASY	80347	genome.wustl.edu	37	17	40715174	40715174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	17	40715174	40715174	C	T	SNP	COASY	ENST00000426807	human	ensembl	58_37c	+1	known	missense	c.463	p.P155S	0.998	NULL	NULL	-	no_errors
COX5A	9377	genome.wustl.edu	37	15	75221511	75221511	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	15	75221511	75221511	G	A	SNP	COX5A	NM_004255.3	human	genbank	58_37c	-1	reviewed	missense	c.163	p.R55C	1.000	HMMPfam_COX5A,superfamily_Cyt_c_ox5A	HMMPfam_COX5A,superfamily_Cyt_c_ox5A	-	no_errors
DCST1	149095	genome.wustl.edu	37	1	155018634	155018634	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	1	155018634	155018634	G	T	SNP	DCST1	NM_152494.2	human	genbank	58_37c	+1	validated	nonsense	c.1306	p.E436*	0.814	HMMPfam_DC_STAMP	HMMPfam_DC_STAMP	-	no_errors
DIRAS3	9077	genome.wustl.edu	37	1	68512642	68512642	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	1	68512642	68512642	G	A	SNP	DIRAS3	NM_004675.2	human	genbank	58_37c	-1	reviewed	silent	c.339	p.V113	1.000	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000170089	0	genome.wustl.edu	37	5	177305674	177305674	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	5	177305674	177305674	G	C	SNP	LOC728554	NR_003615.2	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.998	-	-	-	pseudogene
ENSG00000197511	0	genome.wustl.edu	37	1	16862282	16862282	+	Missense_Mutation	SNP	G	A	A	rs11260784	byCluster;byFrequency;by2Hit2Allele;byHapmap	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	1	16862282	16862282	G	A	SNP	ENSG00000197511	ENST00000357301	human	ensembl	58_37c	+1	known	missense	c.3	p.M1I	0.066	NULL	NULL	-	no_errors
ENSG00000245179	0	genome.wustl.edu	37	11	64621788	64621788	+	RNA	SNP	T	T	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	11	64621788	64621788	T	G	SNP	EHD1	ENST00000484846	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-64621788	NULL	0.000	-	-	-	no_coding_region
ENSG00000247634	0	genome.wustl.edu	37	7	66415904	66415904	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	7	66415904	66415904	G	A	SNP	ENSG00000247634	ENST00000500273	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors
FAHD2A	51011	genome.wustl.edu	37	2	96076768	96076768	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	2	96076768	96076768	G	A	SNP	FAHD2A	NM_016044.2	human	genbank	58_37c	+1	validated	missense	c.679	p.V227I	0.829	HMMPfam_FAA_hydrolase,superfamily_Fumarylacetoacetase_C-rel	HMMPfam_FAA_hydrolase,superfamily_Fumarylacetoacetase_C-rel	-	no_errors
FAM110B	90362	genome.wustl.edu	37	8	59059479	59059479	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	8	59059479	59059479	C	T	SNP	FAM110B	NM_147189.2	human	genbank	58_37c	+1	validated	silent	c.690	p.I230	0.507	NULL	NULL	-	no_errors
FPGS	2356	genome.wustl.edu	37	9	130575737	130575737	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	9	130575737	130575737	C	T	SNP	FPGS	NM_004957.4	human	genbank	58_37c	+1	reviewed	missense	c.1618	p.P540S	0.000	NULL	HMMPfam_Mur_ligase_C,superfamily_MurD-like peptide ligases peptide-binding domain,superfamily_MurD-like peptide ligases catalytic domain,PatternScan_FOLYLPOLYGLU_SYNT_1,PatternScan_FOLYLPOLYGLU_SYNT_2	-	no_errors
FRMPD1	22844	genome.wustl.edu	37	9	37731074	37731074	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	9	37731074	37731074	G	A	SNP	FRMPD1	NM_014907.2	human	genbank	58_37c	+1	validated	missense	c.832	p.V278M	0.990	HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41	-	no_errors
HGS	9146	genome.wustl.edu	37	17	79653400	79653400	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	17	79653400	79653400	G	T	SNP	HGS	NM_004712.3	human	genbank	58_37c	+1	provisional	missense	c.181	p.A61S	1.000	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288	HMMPfam_FYVE,HMMSmart_SM00064,HMMPfam_VHS,HMMPfam_UIM,superfamily_ENTH/VHS domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00288	-	no_errors
HRNR	388697	genome.wustl.edu	37	1	152191302	152191303	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	1	152191302	152191303	-	G	INS	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	frame_shift_ins	c.2803_2802	p.K934fs	0.000:0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
HSPA4L	22824	genome.wustl.edu	37	4	128751921	128751921	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	4	128751921	128751921	G	A	SNP	HSPA4L	NM_014278.2	human	genbank	58_37c	+1	provisional	silent	c.2295	p.V765	1.000	superfamily_SSF100934	HMMPfam_HSP70,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934,superfamily_SSF53067	-	no_errors
ITGAM	3684	genome.wustl.edu	37	16	31341486	31341486	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	16	31341486	31341486	G	T	SNP	ITGAM	NM_000632.3	human	genbank	58_37c	+1	reviewed	splice_site	c.3060+1	e26+1	1.000	-	-	-	no_errors
KCTD21	283219	genome.wustl.edu	37	11	77885216	77885216	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	11	77885216	77885216	C	T	SNP	KCTD21	NM_001029859.1	human	genbank	58_37c	-1	provisional	missense	c.385	p.E129K	0.983	NULL	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold	-	no_errors
KNDC1	85442	genome.wustl.edu	37	10	135026343	135026343	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	10	135026343	135026343	G	A	SNP	KNDC1	NM_152643.6	human	genbank	58_37c	+1	validated	missense	c.4360	p.A1454T	0.134	superfamily_Ras GEF	HMMPfam_RasGEF_N,HMMSmart_SM00229,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF,HMMSmart_SM00750	-	no_errors
KRT81	3887	genome.wustl.edu	37	12	52681912	52681912	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	12	52681912	52681912	C	G	SNP	KRT81	NM_002281.3	human	genbank	58_37c	-1	reviewed	silent	c.756	p.S252	0.490	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
LAYN	143903	genome.wustl.edu	37	11	111414717	111414717	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	11	111414717	111414717	G	A	SNP	LAYN	NM_178834.3	human	genbank	58_37c	+1	provisional	missense	c.155	p.R52Q	0.997	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold	HMMPfam_Lectin_C,HMMSmart_CLECT,superfamily_C-type_lectin_fold	-	no_errors
LHCGR	3973	genome.wustl.edu	37	2	48915909	48915909	+	Missense_Mutation	SNP	A	A	T	rs121912536	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	2	48915909	48915909	A	T	SNP	LHCGR	NM_000233.3	human	genbank	58_37c	-1	reviewed	missense	c.1027	p.C343S	0.999	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like	-	no_errors
LOC653061	653061	genome.wustl.edu	37	15	23609313	23609314	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	15	23609313	23609314	-	T	INS	LOC653061	XM_002343325.1	human	genbank	58_37c	+1	model	frame_shift_ins	c.1244_1245	p.G417fs	0.000:0.000	NULL	NULL	-	no_errors
LOC653061	653061	genome.wustl.edu	37	15	23609317	23609319	+	In_Frame_Del	DEL	TGG	TGG	-	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	TGG	TGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	15	23609317	23609319	TGG	-	DEL	LOC653061	XM_002343325.1	human	genbank	58_37c	+1	model	in_frame_del	c.1248_1250	p.G417in_frame_del	0.001:0.004:0.006	NULL	NULL	-	no_errors
LTBP2	4053	genome.wustl.edu	37	14	74970002	74970002	+	Missense_Mutation	SNP	C	C	T	rs75200417	byFrequency	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	14	74970002	74970002	C	T	SNP	LTBP2	NM_000428.2	human	genbank	58_37c	-1	reviewed	missense	c.4808	p.R1603H	0.001	HMMPfam_TB,superfamily_TB module/8-cys domain	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_TB,superfamily_TB module/8-cys domain,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_EGF/Laminin	-	no_errors
MAP3K10	4294	genome.wustl.edu	37	19	40711935	40711935	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	19	40711935	40711935	C	T	SNP	MAP3K10	NM_002446.3	human	genbank	58_37c	+1	reviewed	missense	c.1306	p.R436W	0.999	NULL	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAZ	4150	genome.wustl.edu	37	16	29821526	29821526	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	16	29821526	29821526	C	T	SNP	MAZ	NM_002383.2	human	genbank	58_37c	+1	validated	nonsense	c.1408	p.Q470*	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
MBOAT7	79143	genome.wustl.edu	37	19	54691160	54691160	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	19	54691160	54691160	G	A	SNP	MBOAT7	NM_024298.3	human	genbank	58_37c	-1	reviewed	silent	c.216	p.H72	0.994	NULL	HMMPfam_MBOAT	-	no_errors
MCM6	4175	genome.wustl.edu	37	2	136602246	136602246	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	2	136602246	136602246	C	T	SNP	MCM6	NM_005915.4	human	genbank	58_37c	-1	reviewed	missense	c.2218	p.E740K	1.000	NULL	HMMPfam_MCM,HMMSmart_SM00350,superfamily_Nucleic acid-binding proteins,PatternScan_MCM_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MRPS11	64963	genome.wustl.edu	37	15	89020219	89020219	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	15	89020219	89020219	G	A	SNP	MRPS11	NM_022839.2	human	genbank	58_37c	+1	reviewed	splice_site	c.412-1	e5-1	1.000	-	-	-	no_errors
MYADML2	255275	genome.wustl.edu	37	17	79899495	79899495	+	Silent	SNP	G	G	A	rs4796854	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	17	79899495	79899495	G	A	SNP	MYADML2	NM_001145113.2	human	genbank	58_37c	-1	validated	silent	c.123	p.A41	0.979	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_errors
OR5I1	10798	genome.wustl.edu	37	11	55703121	55703121	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	11	55703121	55703121	G	C	SNP	OR5I1	NM_006637.1	human	genbank	58_37c	-1	reviewed	missense	c.756	p.I252M	0.566	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OTOF	9381	genome.wustl.edu	37	2	26707384	26707384	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	2	26707384	26707384	G	A	SNP	OTOF	NM_194248.2	human	genbank	58_37c	-1	reviewed	missense	c.1163	p.T388M	0.997	HMMPfam_FerI	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerB,HMMPfam_FerI	-	no_errors
P2RY4	5030	genome.wustl.edu	37	X	69479266	69479266	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	X	69479266	69479266	G	A	SNP	P2RY4	NM_002565.3	human	genbank	58_37c	-1	reviewed	missense	c.209	p.T70M	0.732	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PAX5	5079	genome.wustl.edu	37	9	37020655	37020655	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	9	37020655	37020655	A	-	DEL	PAX5	NM_016734.1	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.190	p.C64fs	1.000	HMMPfam_PAX,HMMSmart_SM00351,PatternScan_PAIRED_1,superfamily_Homeodomain-like	HMMPfam_PAX,HMMSmart_SM00351,PatternScan_PAIRED_1,superfamily_Homeodomain-like	-	no_errors
PCDHAC2	56134	genome.wustl.edu	37	5	140348769	140348769	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	5	140348769	140348769	C	A	SNP	PCDHAC2	NM_018899.5	human	genbank	58_37c	+1	reviewed	missense	c.2418	p.F806L	1.000	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDGFRA	5156	genome.wustl.edu	37	4	55133783	55133783	+	Silent	SNP	C	C	G	rs142498442	byCluster;byFrequency;by1000genomes	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	4	55133783	55133783	C	G	SNP	PDGFRA	NM_006206.4	human	genbank	58_37c	+1	reviewed	silent	c.996	p.V332	0.146	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_RECEPTOR_TYR_KIN_III,HMMSmart_SM00220,HMMSmart_SM00408,HMMSmart_SM00409,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_Immunoglobulin	-	no_errors
QSER1	79832	genome.wustl.edu	37	11	32955061	32955061	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	11	32955061	32955061	G	T	SNP	QSER1	NM_001076786.1	human	genbank	58_37c	+1	provisional	missense	c.1870	p.V624F	0.917	NULL	NULL	-	no_errors
SERPINA6	866	genome.wustl.edu	37	14	94770757	94770757	+	Nonstop_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	14	94770757	94770757	A	C	SNP	SERPINA6	NM_001756.3	human	genbank	58_37c	-1	reviewed	nonstop	c.1216	p.*406E	0.000	NULL	HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN,superfamily_Serpins	-	no_errors
SLC2A14	144195	genome.wustl.edu	37	12	7981305	7981305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	12	7981305	7981305	G	A	SNP	SLC2A14	NM_153449.2	human	genbank	58_37c	-1	provisional	missense	c.740	p.T247M	0.000	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter	HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_1,PatternScan_SUGAR_TRANSPORT_2,superfamily_MFS general substrate transporter	-	no_errors
SNX10	29887	genome.wustl.edu	37	7	26404752	26404752	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	7	26404752	26404752	G	A	SNP	SNX10	NM_013322.2	human	genbank	58_37c	+1	reviewed	missense	c.298	p.D100N	1.000	HMMPfam_PX,HMMSmart_PX,superfamily_PX	HMMPfam_PX,HMMSmart_PX,superfamily_PX	-	no_errors
TROAP	10024	genome.wustl.edu	37	12	49724652	49724652	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	12	49724652	49724652	C	G	SNP	TROAP	NM_005480.3	human	genbank	58_37c	+1	validated	missense	c.2024	p.S675C	0.994	NULL	NULL	-	no_errors
TSPAN7	7102	genome.wustl.edu	37	X	38533518	38533518	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	X	38533518	38533518	C	A	SNP	TSPAN7	NM_004615.3	human	genbank	58_37c	+1	reviewed	missense	c.389	p.T130N	1.000	superfamily_Tetraspanin,HMMPfam_Tetraspannin	superfamily_Tetraspanin,HMMPfam_Tetraspannin,PatternScan_TM4_1	-	no_errors
TWISTNB	221830	genome.wustl.edu	37	7	19739894	19739894	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	7	19739894	19739894	T	A	SNP	TWISTNB	NM_001002926.1	human	genbank	58_37c	-1	validated	missense	c.406	p.N136Y	1.000	NULL	HMMPfam_RNA_pol_Rpb7_N	-	no_errors
UQCRC2	7385	genome.wustl.edu	37	16	21994417	21994417	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	16	21994417	21994417	G	C	SNP	UQCRC2	NM_003366.2	human	genbank	58_37c	+1	validated	missense	c.1287	p.K429N	1.000	superfamily_LuxS/MPP-like metallohydrolase	PatternScan_INSULINASE,HMMPfam_Peptidase_M16_C,superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16	-	no_errors
ZNF498	221785	genome.wustl.edu	37	7	99219167	99219167	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	7	99219167	99219167	G	T	SNP	ZNF498	NM_145115.2	human	genbank	58_37c	+1	validated	nonsense	c.559	p.G187*	0.984	NULL	HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZSCAN2	54993	genome.wustl.edu	37	15	85164365	85164365	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01A-11D-A10Y-09	TCGA-C8-A137-10A-02D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	08778f40-d895-46f1-8e7b-122fc598418b	16cfd410-cb75-4177-884e-c3abf7e4aebb	15	85164365	85164365	G	A	SNP	ZSCAN2	NM_181877.3	human	genbank	58_37c	+1	reviewed	silent	c.939	p.K313	0.877	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_SCAN,HMMSmart_SM00431,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
