Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ATP8B3	148229	genome.wustl.edu	37	19	1802626	1802626	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	19	1802626	1802626	G	A	SNP	ATP8B3	NM_138813.2	human	genbank	58_37c	-1	reviewed	missense	c.923	p.A308V	0.888	HMMPfam_E1-E2_ATPase,superfamily_SSF81653	HMMPfam_E1-E2_ATPase,HMMPfam_Hydrolase_3,PatternScan_EF_HAND_1,PatternScan_ATPASE_E1_E2,superfamily_SSF56784,superfamily_SSF81653,superfamily_SSF81660	-	no_errors
C21orf99	149992	genome.wustl.edu	37	21	14424652	14424652	+	RNA	SNP	G	G	A	rs3875769	byCluster;byFrequency;by2Hit2Allele;byHapmap	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	21	14424652	14424652	G	A	SNP	C21orf99	NR_026916.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	0.042	-	-	-	pseudogene
CAND1	55832	genome.wustl.edu	37	12	67696173	67696173	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	12	67696173	67696173	G	A	SNP	CAND1	NM_018448.3	human	genbank	58_37c	+1	validated	silent	c.1071	p.L357	1.000	superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_TIP120,superfamily_ARM repeat	-	no_errors
CCIN	881	genome.wustl.edu	37	9	36169514	36169514	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	9	36169514	36169514	C	A	SNP	CCIN	NM_005893.2	human	genbank	58_37c	+1	reviewed	missense	c.15	p.F5L	1.000	superfamily_POZ domain	HMMSmart_SM00225,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
CD1B	910	genome.wustl.edu	37	1	158299878	158299878	+	Missense_Mutation	SNP	G	G	C	rs138742244	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	158299878	158299878	G	C	SNP	CD1B	NM_001764.2	human	genbank	58_37c	-1	reviewed	missense	c.371	p.S124C	0.000	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	HMMPfam_MHC_I,HMMPfam_C1-set,HMMSmart_SM00407,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin	-	no_errors
CDH1	999	genome.wustl.edu	37	16	68845685	68845686	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	16	68845685	68845686	-	T	INS	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.931_932	p.D313fs	0.000:0.001	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
CELSR3	1951	genome.wustl.edu	37	3	48694417	48694417	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	48694417	48694417	T	C	SNP	CELSR3	NM_001407.2	human	genbank	58_37c	-1	reviewed	silent	c.4113	p.V1371	1.000	superfamily_EGF/Laminin	PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMSmart_SM00282,HMMPfam_HRM,HMMSmart_SM00008,HMMSmart_SM00179,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Cadherin-like,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_EGF/Laminin	-	no_errors
CSRNP1	64651	genome.wustl.edu	37	3	39185716	39185716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	39185716	39185716	C	T	SNP	CSRNP1	NM_033027.3	human	genbank	58_37c	-1	reviewed	missense	c.692	p.R231H	1.000	NULL	NULL	-	no_errors
EFR3B	22979	genome.wustl.edu	37	2	25358396	25358396	+	Missense_Mutation	SNP	C	C	T	rs187995146	by1000genomes	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	2	25358396	25358396	C	T	SNP	EFR3B	NM_014971.1	human	genbank	58_37c	+1	validated	missense	c.1372	p.R458C	1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
ETV7	51513	genome.wustl.edu	37	6	36334453	36334453	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	6	36334453	36334453	A	G	SNP	ETV7	NM_016135.2	human	genbank	58_37c	-1	provisional	missense	c.995	p.F332S	0.891	NULL	"HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_2,HMMPfam_SAM_PNT,HMMSmart_SM00251,superfamily_SAM/Pointed domain,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
FLNA	2316	genome.wustl.edu	37	X	153599398	153599398	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	X	153599398	153599398	G	A	SNP	FLNA	NM_001110556.1	human	genbank	58_37c	-1	reviewed	silent	c.216	p.S72	1.000	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	HMMSmart_SM00557,PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_E set domains,superfamily_Calponin-homology domain CH-domain,HMMPfam_Filamin	-	no_errors
GLB1L3	112937	genome.wustl.edu	37	11	134179638	134179638	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	11	134179638	134179638	G	A	SNP	GLB1L3	NM_001080407.2	human	genbank	58_37c	+1	validated	silent	c.1080	p.S360	0.000	HMMPfam_Glyco_hydro_35,superfamily_(Trans)glycosidases	HMMPfam_Glyco_hydro_35,superfamily_(Trans)glycosidases	-	no_errors
KLHL21	9903	genome.wustl.edu	37	1	6659504	6659504	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	6659504	6659504	C	T	SNP	KLHL21	NM_014851.2	human	genbank	58_37c	-1	provisional	missense	c.1030	p.D344N	1.000	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain	HMMSmart_SM00225,HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain,superfamily_POZ domain,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
MARVELD2	153562	genome.wustl.edu	37	5	68728474	68728474	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	5	68728474	68728474	A	G	SNP	MARVELD2	NM_001038603.2	human	genbank	58_37c	+1	validated	missense	c.1303	p.K435E	0.991	NULL	HMMPfam_MARVEL,HMMPfam_Occludin_ELL	-	no_errors
MYO16	23026	genome.wustl.edu	37	13	109793246	109793246	+	Silent	SNP	G	G	C	rs80260507	byCluster;byFrequency;by1000genomes	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	13	109793246	109793246	G	C	SNP	MYO16	NM_015011.1	human	genbank	58_37c	+1	validated	silent	c.4620	p.P1540	0.201	NULL	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NRK	203447	genome.wustl.edu	37	X	105152945	105152945	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	X	105152945	105152945	C	T	SNP	NRK	NM_198465.2	human	genbank	58_37c	+1	validated	nonsense	c.1312	p.R438*	0.001	NULL	HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_p53-like transcription factors,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
ODZ4	26011	genome.wustl.edu	37	11	78775887	78775887	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	11	78775887	78775887	C	T	SNP	ODZ4	NM_001098816.2	human	genbank	58_37c	-1	validated	missense	c.389	p.R130H	1.000	HMMPfam_Ten_N	HMMPfam_NHL,HMMSmart_EGF,HMMPfam_RHS_repeat,HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_TolB_C,superfamily_SSF57196	-	no_errors
PCDHB19P	84054	genome.wustl.edu	37	5	140621075	140621075	+	RNA	SNP	G	G	A	rs112781549	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	5	140621075	140621075	G	A	SNP	ENSG00000251462	ENST00000503443	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.492	-	-	-	no_errors
PCDHB7	56129	genome.wustl.edu	37	5	140553401	140553401	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	5	140553401	140553401	G	A	SNP	PCDHB7	NM_018940.2	human	genbank	58_37c	+1	reviewed	missense	c.985	p.G329R	0.008	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PHACTR3	116154	genome.wustl.edu	37	20	58342410	58342410	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	20	58342410	58342410	G	A	SNP	PHACTR3	NM_080672.3	human	genbank	58_37c	+1	reviewed	silent	c.711	p.P237	0.667	NULL	HMMPfam_RPEL,HMMSmart_SM00707	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178938934	178938934	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	178938934	178938934	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.2176	p.E726K	1.000	superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PLCL1	5334	genome.wustl.edu	37	2	198949560	198949560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	2	198949560	198949560	G	A	SNP	PLCL1	NM_006226.3	human	genbank	58_37c	+1	validated	missense	c.1025	p.R342Q	1.000	HMMPfam_PI-PLC-X,HMMSmart_PLCXc,superfamily_PLC-like_Pdiesterase_TIM-brl	HMMPfam_C2,HMMSmart_C2,HMMPfam_PI-PLC-X,HMMSmart_PLCXc,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,HMMPfam_PH,HMMSmart_PH,superfamily_C2_CaLB,HMMPfam_efhand_like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF47473,superfamily_SSF50729	-	no_errors
RAP1GAP	5909	genome.wustl.edu	37	1	21936700	21936700	+	Silent	SNP	G	G	A	rs139733672	byCluster;byFrequency;by1000genomes	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	21936700	21936700	G	A	SNP	RAP1GAP	NM_001145658.1	human	genbank	58_37c	-1	validated	silent	c.1104	p.F368	0.993	HMMPfam_Rap_GAP,superfamily_Rap/Ran-GAP (Pfam 02145)	HMMPfam_Rap_GAP,HMMPfam_GoLoco,HMMSmart_SM00390,superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_errors
REEP3	221035	genome.wustl.edu	37	10	65380602	65380602	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	10	65380602	65380602	G	T	SNP	REEP3	NM_001001330.2	human	genbank	58_37c	+1	validated	silent	c.741	p.V247	1.000	NULL	HMMPfam_TB2_DP1_HVA22	-	no_errors
RLF	6018	genome.wustl.edu	37	1	40705088	40705088	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	1	40705088	40705088	C	T	SNP	RLF	NM_012421.3	human	genbank	58_37c	+1	validated	missense	c.4714	p.R1572C	1.000	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
SF3B1	23451	genome.wustl.edu	37	2	198266493	198266493	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	2	198266493	198266493	A	T	SNP	SF3B1	NM_012433.2	human	genbank	58_37c	-1	reviewed	missense	c.2343	p.D781E	1.000	superfamily_ARM repeat	HMMPfam_HEAT,HMMPfam_SF3b1,superfamily_ARM repeat	-	no_errors
STAG1	10274	genome.wustl.edu	37	3	136088052	136088052	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	3	136088052	136088052	G	A	SNP	STAG1	NM_005862.2	human	genbank	58_37c	-1	reviewed	nonsense	c.2443	p.Q815*	1.000	superfamily_ARM-type_fold	HMMPfam_STAG,superfamily_ARM-type_fold	-	no_errors
SUPT6H	6830	genome.wustl.edu	37	17	27014157	27014157	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	17	27014157	27014157	C	T	SNP	SUPT6H	NM_003170.3	human	genbank	58_37c	+1	validated	missense	c.2752	p.R918W	1.000	NULL	HMMSmart_SM00252,HMMPfam_S1,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMPfam_Tex_N,HMMSmart_SM00316,superfamily_SH2 domain	-	no_errors
ZNF99	7652	genome.wustl.edu	37	19	22940742	22940742	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10F-01A-11D-A10M-09	TCGA-E2-A10F-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	530b7e22-e70a-46ef-a0e8-bf2ef814850a	2b190b7e-7bb6-46df-8e67-eef219faebd6	19	22940742	22940742	C	A	SNP	ZNF99	NM_001080409.1	human	genbank	58_37c	-1	provisional	missense	c.1696	p.A566S	0.824	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
