Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA3	21	broad.mit.edu	37	16	2373438	2373438	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87168583	87168583	+	Splice_Site	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35578665	35578665	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109604846	109604846	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRBP	84519	broad.mit.edu	37	12	6749396	6749396	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236918313	236918313	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39618684	39618684	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106232245	106232245	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106235814	106235814	+	RNA	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100636656	100636656	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77369512	77369512	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178634669	178634669	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADARB1	104	broad.mit.edu	37	21	46603320	46603320	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA3	140	broad.mit.edu	37	1	112028521	112028521	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58128016	58128016	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP3	10566	broad.mit.edu	37	12	4736589	4736589	+	Silent	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKD1	221264	broad.mit.edu	37	6	109954585	109954585	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3B2	222	broad.mit.edu	37	11	67450448	67450448	+	5'Flank	DEL	G	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115215953	115215953	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC1	64682	broad.mit.edu	37	2	112592101	112592101	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	853683	853683	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73964753	73964753	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14797763	14797763	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197964625	197964625	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD55	79722	broad.mit.edu	37	5	55433219	55433219	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26552645	26552645	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21257763	21257763	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APTX	54840	broad.mit.edu	37	9	32986120	32986120	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36230472	36230472	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP12	94134	broad.mit.edu	37	10	32099697	32099697	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF17	9828	broad.mit.edu	37	11	73020531	73020531	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101075568	101075568	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197070841	197070841	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160029780	160029780	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47538077	47538077	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25280381	25280381	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5H	10476	broad.mit.edu	37	17	73035219	73035219	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77298209	77298209	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B3	148229	broad.mit.edu	37	19	1785454	1785454	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	117045738	117045738	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69685223	69685223	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70065787	70065787	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60272985	60272985	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC8	112401	broad.mit.edu	37	19	53793228	53793228	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140481402	140481402	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93744142	93744142	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUD13	84811	broad.mit.edu	37	11	116619165	116619165	+	3'UTR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	78317043	78317043	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf53	341032	broad.mit.edu	37	11	111152148	111152148	+	5'UTR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24922411	24922411	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923271	24923271	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf45	85019	broad.mit.edu	37	18	20953578	20953578	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75037052	75037052	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75078489	75078489	+	Silent	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf103	24141	broad.mit.edu	37	20	9510205	9510205	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf27	54976	broad.mit.edu	37	20	3736275	3736275	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf99	149992	broad.mit.edu	37	21	14424160	14424160	+	RNA	SNP	G	C	C	rs3875768		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf28	51493	broad.mit.edu	37	22	32808263	32808263	+	5'UTR	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	53883845	53883845	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181702858	181702858	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27463992	27463993	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER1	117144	broad.mit.edu	37	11	65789363	65789363	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAT	847	broad.mit.edu	37	11	34478364	34478364	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC87	55231	broad.mit.edu	37	11	66358319	66358319	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD58	965	broad.mit.edu	37	1	117076673	117076673	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC27	996	broad.mit.edu	37	17	45219678	45219678	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65032451	65032451	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21760847	21760847	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202755504	202755504	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK17	5128	broad.mit.edu	37	12	96691534	96691534	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CECR5	27440	broad.mit.edu	37	22	17629314	17629314	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34855235	34855235	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	418010	418010	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB3	1142	broad.mit.edu	37	8	42591742	42591742	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53036592	53036592	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122165204	122165204	+	Frame_Shift_Del	DEL	G	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4E	26253	broad.mit.edu	37	12	8691694	8691694	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33156932	33156932	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189921588	189921588	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD3	23412	broad.mit.edu	37	10	22607738	22607738	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO6	84940	broad.mit.edu	37	17	27946557	27946557	+	Intron	SNP	C	A	A	rs11650479		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX18	285521	broad.mit.edu	37	4	73930654	73930654	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPD	1362	broad.mit.edu	37	17	28750105	28750105	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197390533	197390533	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43894044	43894044	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP3	10321	broad.mit.edu	37	6	49704164	49704164	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149452813	149452813	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3165387	3165388	+	Intron	DNP	CA	AG	AG			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113403035	113403035	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16873346	16873346	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F8	11283	broad.mit.edu	37	19	15733988	15733988	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20015301	20015301	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100672123	100672123	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC1	55635	broad.mit.edu	37	1	68954074	68954074	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKA	1606	broad.mit.edu	37	12	56346633	56346633	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DICER1	23405	broad.mit.edu	37	14	95571630	95571630	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61511339	61511339	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	468680	468680	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTC2	63946	broad.mit.edu	37	19	42354807	42354807	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13758948	13758948	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196750942	196750942	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11572592	11572592	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225739438	225739438	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146780281	146780281	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56485422	56485422	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32395764	32395764	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348916	348916	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK1A	1859	broad.mit.edu	37	21	38850432	38850432	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD3	30845	broad.mit.edu	37	2	31467366	31467366	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF5B	9669	broad.mit.edu	37	2	100010936	100010941	+	Intron	DEL	ACATAC	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37053009	37053009	+	Missense_Mutation	SNP	C	A	A	rs149093668	byFrequency	TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN3	90187	broad.mit.edu	37	20	39989924	39989924	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42531615	42531615	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66439243	66439243	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23219338	23219338	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAL1	26284	broad.mit.edu	37	17	27182086	27182086	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERICH1	157697	broad.mit.edu	37	8	623844	623844	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66205320	66205320	+	5'UTR	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM177B	400823	broad.mit.edu	37	1	222923324	222923324	+	Frame_Shift_Del	DEL	A	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM18A	780776	broad.mit.edu	37	16	10865432	10865432	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237488	12237488	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM72A	729533	broad.mit.edu	37	1	206141344	206141344	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187584546	187584546	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92590441	92590441	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLIM1	54751	broad.mit.edu	37	1	16101240	16101240	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45946327	45946327	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO2	26232	broad.mit.edu	37	1	11709842	11709842	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF19	9965	broad.mit.edu	37	11	69514154	69514154	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328737	152328737	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153592803	153592803	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147021996	147021996	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNTA	2339	broad.mit.edu	37	8	42914258	42914258	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49192921	49192921	+	Intron	SNP	A	T	T	rs34828796		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79443999	79443999	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49430483	49430483	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100185118	100185118	+	Silent	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1	79187	broad.mit.edu	37	19	4306191	4306191	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49190832	49190832	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49295498	49295498	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162421230	162421230	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66028456	66028456	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66200203	66200203	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR2	9513	broad.mit.edu	37	17	7495160	7495160	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA5	2558	broad.mit.edu	37	15	27182452	27182452	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161117162	161117162	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	27128289	27128289	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128094322	128094322	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9850262	9850262	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27729531	27729531	+	Intron	SNP	C	A	A	rs2032971		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57858560	57858560	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57858976	57858976	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42512403	42512403	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR56	9289	broad.mit.edu	37	16	57690573	57690573	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL3	57822	broad.mit.edu	37	1	24669281	24669281	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102247541	102247541	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37338051	37338051	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13768217	13768217	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRTP1	79774	broad.mit.edu	37	13	114005389	114005389	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA5	221357	broad.mit.edu	37	6	52699031	52699031	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2P1	442245	broad.mit.edu	37	6	111368258	111368258	+	Missense_Mutation	SNP	A	G	G	rs112652573		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM3	2947	broad.mit.edu	37	1	110279825	110279825	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTTP1	25774	broad.mit.edu	37	22	24348669	24348669	+	5'Flank	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H19	283120	broad.mit.edu	37	11	2017334	2017334	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC6	10013	broad.mit.edu	37	X	48661577	48661577	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186114801	186114801	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55360355	55360355	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27140486	27140486	+	Silent	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27194740	27194740	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25702345	25702345	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL10RA	3587	broad.mit.edu	37	11	117869691	117869691	+	Missense_Mutation	SNP	G	T	T	rs78753252	byFrequency	TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27445756	27445756	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35867591	35867591	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155233054	155233054	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG2	51141	broad.mit.edu	37	2	118854157	118854157	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCA1	79781	broad.mit.edu	37	2	237415899	237415899	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91037916	91037916	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68661644	68661644	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52214506	52214506	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7755254	7755254	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156649936	156649936	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK2	3717	broad.mit.edu	37	9	5050756	5050756	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUB	84962	broad.mit.edu	37	14	23447671	23447671	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73848519	73848519	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163256864	163256864	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21319603	21319603	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78647236	78647236	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ1	3784	broad.mit.edu	37	11	2591907	2591907	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58988420	58988420	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108279759	108279759	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44596043	44596043	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86869526	86869526	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT34	3885	broad.mit.edu	37	17	39538481	39538481	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53201583	53201583	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52841671	52841671	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-9	386676	broad.mit.edu	37	21	46047872	46047872	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-11	653240	broad.mit.edu	37	17	39274174	39274174	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21494657	21494657	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN12	286256	broad.mit.edu	37	9	139849763	139849763	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136594073	136594073	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX5	64211	broad.mit.edu	37	12	113907096	113907096	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL1	3996	broad.mit.edu	37	17	18145251	18145251	+	Silent	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49830115	49830115	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91843332	91843332	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62935842	62935842	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133824234	133824234	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG1	26018	broad.mit.edu	37	3	66465421	66465422	+	Frame_Shift_Ins	INS	-	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141091946	141091946	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141274656	141274656	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141946239	141946239	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57570765	57570765	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57588639	57588639	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC23	10233	broad.mit.edu	37	12	7014864	7014864	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	75022418	75022418	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1C1	57134	broad.mit.edu	37	1	26077525	26077525	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71491582	71491582	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1	4190	broad.mit.edu	37	2	63831786	63831786	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945057	151945057	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLPH	79083	broad.mit.edu	37	2	238443296	238443296	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL42	28977	broad.mit.edu	37	12	93870594	93870594	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714983	92714983	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTX3	345778	broad.mit.edu	37	5	79279667	79279667	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1098690	1098690	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1264035	1264035	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10399302	10399302	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10544690	10544690	+	Splice_Site	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10310342	10310342	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK2	85366	broad.mit.edu	37	20	30408290	30408290	+	Silent	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123419547	123419547	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128339427	128339427	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1842936	1842936	+	Frame_Shift_Del	DEL	A	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16918548	16918548	+	5'UTR	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCBP2	22916	broad.mit.edu	37	3	196664343	196664343	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173997044	173997044	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR2	56923	broad.mit.edu	37	5	151771964	151771964	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC2L	26155	broad.mit.edu	37	1	881525	881525	+	Intron	SNP	A	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPM2	10361	broad.mit.edu	37	8	21891585	21891585	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN2	80023	broad.mit.edu	37	20	333933	333933	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT17	200035	broad.mit.edu	37	1	145586946	145586946	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183713936	183713936	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102269750	102269750	+	3'UTR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47775959	47775959	+	Missense_Mutation	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRM1	4988	broad.mit.edu	37	6	154414418	154414418	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1M1	125963	broad.mit.edu	37	19	9204166	9204166	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AG1	144125	broad.mit.edu	37	11	6806406	6806406	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T1	26696	broad.mit.edu	37	1	248569559	248569559	+	Silent	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T27	403239	broad.mit.edu	37	1	248813976	248813976	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A1	4994	broad.mit.edu	37	17	3195311	3195311	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E4	390081	broad.mit.edu	37	11	5906021	5906021	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AR1	219493	broad.mit.edu	37	11	56431279	56431279	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000696	56000696	+	5'Flank	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSR2	116039	broad.mit.edu	37	8	99961644	99961644	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTM1	28962	broad.mit.edu	37	6	108385304	108385304	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29642629	29642629	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY6	5031	broad.mit.edu	37	11	73008274	73008274	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAH	5053	broad.mit.edu	37	12	103298606	103298606	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP1	10605	broad.mit.edu	37	5	43547762	43547762	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77066698	77066698	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX3	116337	broad.mit.edu	37	11	124487352	124487352	+	Silent	SNP	C	T	T	rs147550190		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176668286	176668286	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE2	399967	broad.mit.edu	37	11	125648692	125648692	+	5'UTR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55569381	55569381	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA7	56108	broad.mit.edu	37	5	140764230	140764230	+	Silent	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB3	56102	broad.mit.edu	37	5	140751709	140751709	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCF11	51585	broad.mit.edu	37	11	82876987	82876987	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165752638	165752638	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20705159	20705159	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144877096	144877096	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55140637	55140637	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119043833	119043833	+	Missense_Mutation	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92146467	92146467	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFDN2	5202	broad.mit.edu	37	1	161087769	161087769	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGC	5225	broad.mit.edu	37	6	41712181	41712181	+	Silent	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGN	23556	broad.mit.edu	37	18	59828461	59828461	+	Silent	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGR	5284	broad.mit.edu	37	1	207105801	207105801	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98405277	98405277	+	Missense_Mutation	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R2	5296	broad.mit.edu	37	19	18272854	18272854	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8785177	8785177	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8787937	8787937	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8792128	8792128	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8731976	8731976	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130839341	130839341	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX1	5316	broad.mit.edu	37	21	44438272	44438272	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242253245	242253245	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	182169	182169	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA5	150379	broad.mit.edu	37	22	44277543	44277543	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD1	5424	broad.mit.edu	37	19	50906870	50906870	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43156945	43156945	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287667	16287667	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3D	5509	broad.mit.edu	37	20	58514033	58514033	+	3'UTR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3D	5509	broad.mit.edu	37	20	58514537	58514537	+	Silent	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23524677	23524677	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKY	5616	broad.mit.edu	37	Y	7193996	7193996	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRND	23627	broad.mit.edu	37	20	4705533	4705533	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTPIP2	9050	broad.mit.edu	37	18	43572056	43572056	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141684259	141684260	+	Intron	DNP	GG	AA	AA			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTP4A1	7803	broad.mit.edu	37	6	64290116	64290116	+	3'UTR	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18750450	18750450	+	3'UTR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PURG	29942	broad.mit.edu	37	8	30889896	30889896	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52252232	52252232	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1680744	1680744	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDML	140902	broad.mit.edu	37	20	42965887	42965887	+	Silent	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL2B	11158	broad.mit.edu	37	22	51216443	51216443	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170395403	170395403	+	Intron	SNP	T	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170395421	170395421	+	Intron	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80366447	80366447	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASL10B	91608	broad.mit.edu	37	17	34062078	34062078	+	5'UTR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCSD1	92241	broad.mit.edu	37	1	167659257	167659257	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43604704	43604704	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111672848	111672848	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGR	5995	broad.mit.edu	37	10	86007205	86007205	+	Intron	SNP	T	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87365604	87365604	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55542556	55542556	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP3	79657	broad.mit.edu	37	12	48075453	48075453	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPLP0	6175	broad.mit.edu	37	12	120636469	120636469	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS4X	6191	broad.mit.edu	37	X	71492503	71492503	+	3'UTR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS9	6203	broad.mit.edu	37	19	54704989	54704989	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSU1	6251	broad.mit.edu	37	10	16824145	16824145	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51176012	51176012	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148800606	148800606	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARA5	286133	broad.mit.edu	37	8	27824157	27824157	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD	6319	broad.mit.edu	37	10	102112089	102112089	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71391459	71391459	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L4	284904	broad.mit.edu	37	22	30886131	30886131	+	Missense_Mutation	SNP	T	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A2	55176	broad.mit.edu	37	10	12191875	12191875	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINC1	462	broad.mit.edu	37	1	173886421	173886421	+	5'UTR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS18	25957	broad.mit.edu	37	6	99856015	99856015	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS4	6429	broad.mit.edu	37	1	29486795	29486795	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN5	94097	broad.mit.edu	37	2	73226176	73226176	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGSM1	129049	broad.mit.edu	37	22	25251515	25251515	+	Splice_Site	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2834061	2834061	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51159381	51159381	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164780204	164780204	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36177275	36177275	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99340562	99340562	+	Silent	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36679962	36679962	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A35	399512	broad.mit.edu	37	17	8195771	8195771	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A6	11182	broad.mit.edu	37	9	136340607	136340607	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A4	120103	broad.mit.edu	37	11	92881599	92881599	+	3'UTR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	76107465	76107465	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85285942	85285942	+	5'UTR	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143567219	143567219	+	5'UTR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20867940	20867940	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4C1	353189	broad.mit.edu	37	5	101592825	101592825	+	Missense_Mutation	SNP	T	G	G	rs143134834		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN14	342618	broad.mit.edu	37	17	33878744	33878744	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20493522	20493522	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84454814	84454814	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10277675	10277675	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25220717	25220717	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51442834	51442834	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51617134	51617134	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51621671	51621671	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX25	83891	broad.mit.edu	37	4	186272671	186272671	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118496508	118496508	+	3'UTR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN1	494118	broad.mit.edu	37	X	144329225	144329225	+	Intron	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA17	128153	broad.mit.edu	37	1	217856816	217856816	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35771973	35771974	+	Intron	DNP	GG	TT	TT			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY3	10251	broad.mit.edu	37	X	155003948	155003948	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55656592	55656592	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42147077	42147077	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64491115	64491115	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSRP1	6749	broad.mit.edu	37	11	57095078	57095078	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045937	53045937	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA2	8128	broad.mit.edu	37	15	92977636	92977636	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104092771	104092771	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104109567	104109567	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104160050	104160050	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4104601	4104601	+	Silent	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1220699	1220699	+	Missense_Mutation	SNP	G	T	T	rs137853082		TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32C	282974	broad.mit.edu	37	10	134038769	134038769	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUGT1L1	283507	broad.mit.edu	37	13	41486617	41486617	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29779648	29779648	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115418714	115418714	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132892437	132892437	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D14	57533	broad.mit.edu	37	4	7006648	7006648	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D19	55296	broad.mit.edu	37	4	26685161	26685161	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38091623	38091623	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114793888	114793888	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN3	26123	broad.mit.edu	37	10	97440280	97440280	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50681731	50681731	+	5'UTR	DEL	G	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169648565	169648565	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEMIS	387357	broad.mit.edu	37	6	128176268	128176268	+	Missense_Mutation	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2192886	2192887	+	Intron	DNP	CC	AA	AA			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156381546	156381546	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF1	53346	broad.mit.edu	37	15	83790637	83790637	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98443832	98443832	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27258722	27258722	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175049664	175049664	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175375219	175375219	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32029152	32029152	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577105	7577105	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577138	7577138	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP1	26146	broad.mit.edu	37	2	239257309	239257309	+	Intron	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209936096	209936096	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	120008387	120008387	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM39	56658	broad.mit.edu	37	6	30303750	30303750	+	Missense_Mutation	SNP	A	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189063558	189063558	+	Silent	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38237654	38237654	+	Silent	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135549152	135549152	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPT1	83707	broad.mit.edu	37	11	63992969	63992969	+	Splice_Site	SNP	A	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN54	283989	broad.mit.edu	37	17	73513503	73513503	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHB	7252	broad.mit.edu	37	1	115576322	115576322	+	Intron	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL12	23170	broad.mit.edu	37	22	43570062	43570062	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76201666	76201666	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84403666	84403666	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNB	167838	broad.mit.edu	37	6	139598141	139598141	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNL4B	54957	broad.mit.edu	37	16	72124580	72124580	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBIAD1	29914	broad.mit.edu	37	1	11345795	11345795	+	Silent	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCMA	221044	broad.mit.edu	37	10	13271742	13271742	+	Intron	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128913089	128913089	+	Missense_Mutation	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33497247	33497247	+	Silent	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158922386	158922386	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216462704	216462704	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216538451	216538451	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP36	57602	broad.mit.edu	37	17	76802167	76802167	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144768315	144768315	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2D	257313	broad.mit.edu	37	3	190993099	190993099	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65929261	65929261	+	IGR	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27828374	27828375	+	IGR	DNP	CC	AA	AA			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	3435234	3435234	+	IGR	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	39183110	39183110	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	14408077	14408077	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	44000591	44000591	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64217273	64217273	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	94534257	94534257	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53982871	53982871	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61211452	61211452	+	IGR	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61211524	61211524	+	IGR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19118270	19118270	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45329757	45329757	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21106585	21106585	+	IGR	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22448741	22448741	+	IGR	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	27890602	27890602	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	60163884	60163884	+	IGR	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	71355516	71355516	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76039675	76039675	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	96984847	96984847	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32182757	32182757	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33630239	33630239	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	76269503	76269503	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	10162436	10162436	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	22204755	22204755	+	IGR	SNP	G	T	T	rs140882955	by1000genomes	TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14632721	14632722	+	IGR	DNP	CC	AA	AA			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22486685	22486685	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148902997	148902997	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	162415693	162415693	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	240800201	240800201	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175473	39175473	+	IGR	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10329823	10329823	+	IGR	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	26734298	26734298	+	IGR	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32114596	32114596	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131258127	131258127	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162364227	162364227	+	IGR	SNP	T	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458731	90458731	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96246479	96246479	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149700989	149700989	+	IGR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	74185389	74185389	+	IGR	SNP	C	A	A	rs138139365	by1000genomes	TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13649857	13649857	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	44997059	44997059	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25909822	25909822	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	133189751	133189751	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97096673	97096673	+	IGR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97096725	97096725	+	IGR	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143854947	143854947	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	32511557	32511557	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63033560	63033560	+	IGR	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47526083	47526083	+	IGR	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	127957989	127957989	+	IGR	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30559102	30559102	+	IGR	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68358106	68358106	+	IGR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14107792	14107792	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9386054	9386054	+	IGR	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9866086	9866086	+	IGR	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX1	11023	broad.mit.edu	37	10	118897464	118897464	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN1	8876	broad.mit.edu	37	6	133033012	133033012	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33235055	33235056	+	Frame_Shift_Ins	INS	-	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA2	340706	broad.mit.edu	37	10	116014569	116014569	+	Intron	DEL	G	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP1	23559	broad.mit.edu	37	2	74687010	74687010	+	Silent	SNP	G	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71036273	71036273	+	Silent	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74999643	74999643	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134896335	134896335	+	5'Flank	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT11	7481	broad.mit.edu	37	11	75907792	75907792	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30958475	30958475	+	Intron	SNP	A	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	6024017	6024017	+	3'UTR	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XAGE5	170627	broad.mit.edu	37	X	52844156	52844156	+	Silent	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31589514	31589514	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73063053	73063053	+	RNA	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR7	343702	broad.mit.edu	37	20	30584986	30584986	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC1	7515	broad.mit.edu	37	19	44049939	44049939	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167045964	167045964	+	Intron	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB45	84878	broad.mit.edu	37	19	59028554	59028554	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC13	54503	broad.mit.edu	37	11	19177405	19177405	+	Silent	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC2	7546	broad.mit.edu	37	13	100634871	100634871	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF202	7753	broad.mit.edu	37	11	123600515	123600515	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF223	7766	broad.mit.edu	37	19	44564659	44564659	+	Missense_Mutation	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38109438	38109438	+	Intron	SNP	C	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58718580	58718580	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280A	129025	broad.mit.edu	37	22	22869678	22869678	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280D	54816	broad.mit.edu	37	15	56946704	56946704	+	Intron	DEL	A	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF285	26974	broad.mit.edu	37	19	44891421	44891421	+	Missense_Mutation	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF397	84307	broad.mit.edu	37	18	32823239	32823239	+	Missense_Mutation	SNP	T	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22847646	22847646	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF513	130557	broad.mit.edu	37	2	27602879	27602879	+	Intron	SNP	T	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936032	30936032	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF665	79788	broad.mit.edu	37	19	53668353	53668353	+	Missense_Mutation	SNP	C	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF670	93474	broad.mit.edu	37	1	247201596	247201596	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57529162	57529162	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF71	58491	broad.mit.edu	37	19	57132833	57132834	+	Frame_Shift_Ins	INS	-	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF737	100129842	broad.mit.edu	37	19	20727575	20727575	+	Missense_Mutation	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55065737	55065737	+	5'Flank	SNP	A	G	G			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55065810	55065810	+	5'Flank	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22968591	22968591	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148873586	148873586	+	5'Flank	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	65450130	65450130	+	Intron	SNP	A	C	C			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672011	186672011	+	Intron	SNP	C	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89399577	89399577	+	RNA	SNP	G	A	A			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24171169	24171169	+	Intron	SNP	G	T	T			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	153626818	153626821	+	Frame_Shift_Del	DEL	CTCT	-	-			TCGA-75-5146-01A-01D-1625-08	TCGA-75-5146-10A-01D-1625-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
