Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACRC	0	genome.wustl.edu	37	X	70832365	70832365	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	X	70832365	70832365	G	C	SNP	ACRC	NM_052957.4	human	genbank	58_37c	+1	validated	missense	c.1911	p.K637N	0.999	HMMSmart_SM00731,HMMPfam_SprT-like	HMMSmart_SM00731,HMMPfam_SprT-like	-	no_errors
ADAM33	0	genome.wustl.edu	37	20	3649953	3649953	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	20	3649953	3649953	G	T	SNP	ADAM33	NM_025220.2	human	genbank	58_37c	-1	reviewed	missense	c.2397	p.D799E	0.000	NULL	"HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMPfam_Pep_M12B_propep,PatternScan_ZINC_PROTEASE,HMMPfam_ADAM_CR,HMMSmart_SM00608,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_DISINTEGRIN_1,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
AKAP9	0	genome.wustl.edu	37	7	91631496	91631497	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	7	91631496	91631497	AG	-	DEL	AKAP9	NM_005751.4	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.2265_2266	p.E756fs	1.000:1.000	NULL	PatternScan_CPSASE_2,HMMPfam_PACT_coil_coil	-	no_errors
APLP2	0	genome.wustl.edu	37	11	129993589	129993589	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	11	129993589	129993589	C	T	SNP	APLP2	NM_001642.2	human	genbank	58_37c	+1	validated	silent	c.1005	p.C335	1.000	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,superfamily_BPTI-like	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like,HMMPfam_A4_EXTRA,HMMSmart_SM00006,superfamily_Amyloid beta a4 protein copper binding domain (domain 2),superfamily_A heparin-binding domain,HMMPfam_APP_amyloid,PatternScan_A4_EXTRA,PatternScan_A4_INTRA,superfamily_CAPPD an extracellular domain of amyloid beta A4 protein	-	no_errors
ARHGAP31	0	genome.wustl.edu	37	3	119133124	119133124	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	3	119133124	119133124	C	G	SNP	ARHGAP31	NM_020754.2	human	genbank	58_37c	+1	reviewed	missense	c.2348	p.P783R	0.985	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
BPTF	0	genome.wustl.edu	37	17	65850252	65850252	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	65850252	65850252	T	C	SNP	BPTF	NM_182641.3	human	genbank	58_37c	+1	reviewed	silent	c.810	p.F270	0.999	HMMPfam_DDT,HMMSmart_DDT	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMSmart_PHD,HMMPfam_DDT,superfamily_FYVE_PHD_ZnF,HMMPfam_FYDLN_acid,PatternScan_EGF_2,PatternScan_BROMODOMAIN_1,HMMSmart_DDT,PatternScan_ZF_PHD_1,HMMPfam_PHD	-	no_errors
C15orf42	0	genome.wustl.edu	37	15	90143862	90143862	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	15	90143862	90143862	A	G	SNP	C15orf42	NM_152259.3	human	genbank	58_37c	+1	validated	missense	c.2099	p.K700R	1.000	NULL	NULL	-	no_errors
C19orf51	0	genome.wustl.edu	37	19	55677342	55677342	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	19	55677342	55677342	C	G	SNP	C19orf51	NM_178837.3	human	genbank	58_37c	-1	validated	missense	c.253	p.A85P	0.004	NULL	NULL	-	no_errors
C20orf12	0	genome.wustl.edu	37	20	18365188	18365188	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	20	18365188	18365188	T	G	SNP	C20orf12	NM_001099407.1	human	genbank	58_37c	-1	validated	missense	c.2114	p.K705T	1.000	HMMPfam_Ank,superfamily_ANK	HMMSmart_ZnF_RBZ,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
C3orf27	0	genome.wustl.edu	37	3	128292319	128292320	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	3	128292319	128292320	TC	-	DEL	C3orf27	NM_007354.1	human	genbank	58_37c	-1	provisional	frame_shift_del	c.254_253	p.D85fs	0.075:0.076	NULL	NULL	-	no_errors
C4BPA	0	genome.wustl.edu	37	1	207317171	207317171	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	1	207317171	207317171	C	T	SNP	C4BPA	NM_000715.3	human	genbank	58_37c	+1	reviewed	missense	c.1453	p.R485W	0.000	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	-	no_errors
C6orf134	0	genome.wustl.edu	37	6	30613843	30613843	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	6	30613843	30613843	G	C	SNP	C6orf134	ENST00000376485	human	ensembl	58_37c	+1	known	splice_site	c.1049-1	e12-1	1.000	-	-	-	no_errors
CABYR	0	genome.wustl.edu	37	18	21735836	21735836	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	18	21735836	21735836	C	T	SNP	CABYR	NM_012189.2	human	genbank	58_37c	+1	reviewed	missense	c.371	p.S124L	0.984	NULL	HMMPfam_RIIa,HMMSmart_SM00394,superfamily_Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit	-	no_errors
CDC6	0	genome.wustl.edu	37	17	38457154	38457154	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	38457154	38457154	G	C	SNP	CDC6	NM_001254.3	human	genbank	58_37c	+1	reviewed	missense	c.1324	p.D442H	1.000	superfamily_SSF52540	HMMSmart_AAA,HMMPfam_AAA,HMMPfam_Cdc6_C,superfamily_SSF46785,superfamily_SSF52540	-	no_errors
CDC6	0	genome.wustl.edu	37	17	38458209	38458209	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	38458209	38458209	G	C	SNP	CDC6	NM_001254.3	human	genbank	58_37c	+1	reviewed	missense	c.1639	p.D547H	1.000	superfamily_SSF46785	HMMSmart_AAA,HMMPfam_AAA,HMMPfam_Cdc6_C,superfamily_SSF46785,superfamily_SSF52540	-	no_errors
CDS2	0	genome.wustl.edu	37	20	5165585	5165585	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	20	5165585	5165585	C	A	SNP	CDS2	NM_003818.2	human	genbank	58_37c	+1	reviewed	silent	c.753	p.L251	1.000	HMMPfam_CTP_transf_1	HMMPfam_CTP_transf_1,PatternScan_CDS	-	no_errors
CLECL1	0	genome.wustl.edu	37	12	9885586	9885586	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	12	9885586	9885586	C	T	SNP	CLECL1	NM_172004.2	human	genbank	58_37c	-1	validated	missense	c.275	p.R92Q	0.006	superfamily_C-type_lectin_fold	superfamily_C-type_lectin_fold	-	no_errors
DNAH12	0	genome.wustl.edu	37	3	57419477	57419477	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	3	57419477	57419477	A	G	SNP	DNAH12	NM_178504.4	human	genbank	58_37c	-1	validated	silent	c.4665	p.N1555	0.998	HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAH5	0	genome.wustl.edu	37	5	13865914	13865914	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	5	13865914	13865914	C	A	SNP	DNAH5	NM_001369.2	human	genbank	58_37c	-1	reviewed	missense	c.4218	p.K1406N	1.000	HMMPfam_DHC_N2	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_Spectrin,superfamily_SSF52540	-	no_errors
DNM3	0	genome.wustl.edu	37	1	172011231	172011231	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	1	172011231	172011231	G	A	SNP	DNM3	NM_015569.3	human	genbank	58_37c	+1	validated	missense	c.1075	p.G359S	1.000	HMMPfam_Dynamin_M	HMMPfam_Dynamin_M,HMMPfam_Dynamin_N,HMMSmart_DYNc,HMMPfam_PH,HMMSmart_PH,HMMPfam_GED,HMMSmart_GED,PatternScan_DYNAMIN,superfamily_SSF50729,superfamily_SSF52540	-	no_errors
DPCR1	0	genome.wustl.edu	37	6	30917380	30917380	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	6	30917380	30917380	C	T	SNP	DPCR1	ENST00000462446	human	ensembl	58_37c	+1	known	missense	c.1139	p.P380L	0.008	NULL	NULL	-	no_errors
ELFN2	0	genome.wustl.edu	37	22	37770941	37770941	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	22	37770941	37770941	G	A	SNP	ELFN2	NM_052906.3	human	genbank	58_37c	-1	validated	missense	c.634	p.R212C	1.000	HMMSmart_LRRCT,superfamily_SSF52058	HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_FN3,superfamily_SSF52058	-	no_errors
ENSG00000198580	0	genome.wustl.edu	37	7	6714789	6714791	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	7	6714789	6714791	CTT	-	DEL	ENSG00000198580	ENST00000401847	human	ensembl	58_37c	+1	known	in_frame_del	c.501_503	p.F168in_frame_del	0.020:0.594:0.594	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_start_codon:no_stop_codon
ENSG00000226049	0	genome.wustl.edu	37	17	32365115	32365115	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	32365115	32365115	C	T	SNP	ENSG00000226049	ENST00000430493	human	ensembl	58_37c	-1	known	missense	c.1604	p.G535D	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_stop_codon
EPS15L1	0	genome.wustl.edu	37	19	16528799	16528799	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	19	16528799	16528799	G	C	SNP	EPS15L1	NM_021235.1	human	genbank	58_37c	-1	provisional	missense	c.1067	p.P356R	0.315	HMMSmart_EH,superfamily_SSF47473	HMMSmart_EH,HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473	-	no_errors
FER1L5	0	genome.wustl.edu	37	2	97368459	97368459	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	2	97368459	97368459	C	T	SNP	FER1L5	NM_001113382.1	human	genbank	58_37c	+1	provisional	missense	c.5486	p.T1829M	0.186	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00693,HMMSmart_SM00694,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerB,HMMPfam_FerI	-	no_errors
GAGE6	0	genome.wustl.edu	37	X	49217104	49217104	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	X	49217104	49217104	G	T	SNP	GAGE6	NM_001476.1	human	genbank	58_37c	+1	reviewed	missense	c.268	p.A90S	0.000	NULL	NULL	-	pseudogene:no_stop_codon
GRM8	0	genome.wustl.edu	37	7	126544645	126544645	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	7	126544645	126544645	T	G	SNP	GRM8	NM_000845.2	human	genbank	58_37c	-1	reviewed	missense	c.820	p.N274H	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_Periplasmic binding protein-like I	-	no_errors
HEATR4	0	genome.wustl.edu	37	14	73978799	73978808	+	Frame_Shift_Del	DEL	AGGTCTCCCA	AGGTCTCCCA	-	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	AGGTCTCCCA	AGGTCTCCCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	14	73978799	73978808	AGGTCTCCCA	-	DEL	HEATR4	NM_203309.1	human	genbank	58_37c	-1	provisional	frame_shift_del	c.1328_1319	p.L440fs	0.341:0.124:0.099:0.036:0.013:0.001:0.000:0.000:0.002:0.023	superfamily_ARM-type_fold	HMMPfam_HEAT,superfamily_ARM-type_fold	-	no_errors
HS6ST2	0	genome.wustl.edu	37	X	131762534	131762534	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	X	131762534	131762534	C	T	SNP	HS6ST2	NM_001077188.1	human	genbank	58_37c	-1	reviewed	missense	c.1655	p.R552Q	0.996	HMMPfam_HS6ST	HMMPfam_HS6ST	-	no_errors
IQSEC2	0	genome.wustl.edu	37	X	53265517	53265517	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	X	53265517	53265517	G	C	SNP	IQSEC2	NM_001111125.1	human	genbank	58_37c	-1	validated	missense	c.3438	p.D1146E	1.000	NULL	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMSmart_PH,superfamily_SSF50729	-	no_errors
IRS4	0	genome.wustl.edu	37	X	107978147	107978147	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	X	107978147	107978147	G	T	SNP	IRS4	NM_003604.2	human	genbank	58_37c	-1	reviewed	silent	c.1428	p.G476	0.021	NULL	HMMPfam_PH,HMMSmart_PH,HMMPfam_IRS,HMMSmart_PTBI,superfamily_SSF50729	-	no_errors
KIF26B	0	genome.wustl.edu	37	1	245583003	245583003	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	1	245583003	245583003	C	T	SNP	KIF26B	NM_018012.3	human	genbank	58_37c	+1	provisional	silent	c.1122	p.S374	0.984	NULL	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KNTC1	0	genome.wustl.edu	37	12	123058840	123058840	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	12	123058840	123058840	T	C	SNP	KNTC1	NM_014708.4	human	genbank	58_37c	+1	reviewed	silent	c.2295	p.N765	0.998	NULL	PatternScan_BZIP_BASIC,HMMPfam_Rod_C	-	no_errors
KRT24	0	genome.wustl.edu	37	17	38857431	38857431	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	38857431	38857431	G	A	SNP	KRT24	NM_019016.2	human	genbank	58_37c	-1	reviewed	silent	c.816	p.F272	0.230	superfamily_Prefoldin,HMMPfam_Filament	superfamily_Prefoldin,HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP9-9	0	genome.wustl.edu	37	17	39411670	39411671	+	In_Frame_Ins	INS	-	-	ACCTGCTGCAGGACC	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	39411670	39411671	-	ACCTGCTGCAGGACC	INS	KRTAP9-9	NM_030975.2	human	genbank	58_37c	+1	reviewed	in_frame_ins	c.33_34	p.15in_frame_insTTCCR	0.053:0.940	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
LOC440300	0	genome.wustl.edu	37	15	84859462	84859462	+	RNA	SNP	A	A	G	rs76773663	byFrequency	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	15	84859462	84859462	A	G	SNP	LOC440300	XR_078504.1	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.003	-	-	-	pseudogene
LOC645146	0	genome.wustl.edu	37	1	148854076	148854078	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	1	148854076	148854078	CTT	-	DEL	LOC645146	XM_928177.2	human	genbank	58_37c	-1	model	in_frame_del	c.15_13	p.K5in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors
MCHR2	0	genome.wustl.edu	37	6	100404004	100404004	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	6	100404004	100404004	G	C	SNP	MCHR2	NM_001040179.1	human	genbank	58_37c	-1	validated	missense	c.20	p.S7C	0.080	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
MGA	0	genome.wustl.edu	37	15	42028642	42028642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	15	42028642	42028642	C	T	SNP	MGA	NM_001080541.2	human	genbank	58_37c	+1	validated	missense	c.4180	p.R1394C	1.000	NULL	HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_T-box,HMMSmart_SM00425,superfamily_p53-like transcription factors,superfamily_HLH helix-loop-helix DNA-binding domain,PatternScan_TBOX_2	-	no_errors
MLL3	0	genome.wustl.edu	37	7	151970859	151970859	+	Missense_Mutation	SNP	C	C	T	rs149992209	byFrequency	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	7	151970859	151970859	C	T	SNP	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	missense	c.943	p.G315S	1.000	HMMSmart_SM00249	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MUC5B	0	genome.wustl.edu	37	11	1264225	1264225	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	11	1264225	1264225	C	T	SNP	MUC5B	NM_002458.1	human	genbank	58_37c	+1	validated	missense	c.6124	p.P2042S	0.000	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL	-	no_errors
NCOR1	0	genome.wustl.edu	37	17	16029439	16029439	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	16029439	16029439	C	G	SNP	NCOR1	NM_006311.2	human	genbank	58_37c	-1	reviewed	missense	c.1591	p.E531Q	0.998	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
NEK8	0	genome.wustl.edu	37	17	27061083	27061083	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	17	27061083	27061083	G	C	SNP	NEK8	NM_178170.2	human	genbank	58_37c	+1	reviewed	missense	c.130	p.E44Q	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMPfam_RCC1,PatternScan_RCC1_1,PatternScan_RCC1_2,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_RCC1/BLIP-II,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
NFKB2	0	genome.wustl.edu	37	10	104158633	104158633	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	10	104158633	104158633	C	T	SNP	NFKB2	ENST00000423524	human	ensembl	58_37c	+1	known	silent	c.1129	p.L377	0.000	NULL	PatternScan_REL_1,HMMPfam_TIG,HMMSmart_IPT,superfamily_P53_like_DNA_bnd,HMMPfam_RHD,superfamily_Ig_E-set	-	no_errors
NGB	0	genome.wustl.edu	37	14	77735657	77735657	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	14	77735657	77735657	C	G	SNP	NGB	NM_021257.3	human	genbank	58_37c	-1	reviewed	silent	c.102	p.L34	1.000	HMMPfam_Globin,superfamily_Globin-like	HMMPfam_Globin,superfamily_Globin-like	-	no_errors
NPR1	0	genome.wustl.edu	37	1	153659695	153659695	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	1	153659695	153659695	A	T	SNP	NPR1	NM_000906.3	human	genbank	58_37c	+1	validated	missense	c.1955	p.N652I	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,PatternScan_ANF_RECEPTORS,HMMSmart_SM00219,HMMPfam_ANF_receptor,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,PatternScan_GUANYLATE_CYCLASE_1,superfamily_Periplasmic binding protein-like I	-	no_errors
OR4K14	0	genome.wustl.edu	37	14	20482894	20482894	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	14	20482894	20482894	T	C	SNP	OR4K14	NM_001004712.1	human	genbank	58_37c	-1	provisional	silent	c.459	p.G153	0.636	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5T3	0	genome.wustl.edu	37	11	56020439	56020439	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	11	56020439	56020439	T	C	SNP	OR5T3	NM_001004747.1	human	genbank	58_37c	+1	provisional	missense	c.764	p.I255T	0.560	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PHKG2	0	genome.wustl.edu	37	16	30760196	30760196	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	16	30760196	30760196	G	A	SNP	PHKG2	NM_000294.2	human	genbank	58_37c	+1	reviewed	missense	c.55	p.E19K	1.000	superfamily_Kinase_like	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
PLCE1	0	genome.wustl.edu	37	10	96066253	96066253	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	10	96066253	96066253	G	C	SNP	PLCE1	NM_016341.3	human	genbank	58_37c	+1	reviewed	missense	c.5692	p.G1898R	1.000	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RA,HMMSmart_SM00314,HMMPfam_PI-PLC-X,HMMSmart_SM00148,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_efhand_like,superfamily_PLC-like phosphodiesterases,superfamily_EF-hand	-	no_errors
RBM39	0	genome.wustl.edu	37	20	34312573	34312573	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	20	34312573	34312573	G	A	SNP	RBM39	ENST00000448303	human	ensembl	58_37c	-1	known	nonsense	c.223	p.R75*	0.569	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_start_codon:pseudogene:no_stop_codon
SPAM1	0	genome.wustl.edu	37	7	123594426	123594426	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	7	123594426	123594426	C	T	SNP	SPAM1	NM_003117.4	human	genbank	58_37c	+1	reviewed	nonsense	c.802	p.Q268*	0.000	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	-	no_errors
SPANXN2	0	genome.wustl.edu	37	X	142795593	142795593	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	X	142795593	142795593	C	G	SNP	SPANXN2	NM_001009615.1	human	genbank	58_37c	-1	provisional	missense	c.85	p.E29Q	0.001	HMMPfam_SPAN-X	HMMPfam_SPAN-X	-	no_errors
SPATA3	0	genome.wustl.edu	37	2	231861059	231861059	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	2	231861059	231861059	A	T	SNP	SPATA3	NM_139073.3	human	genbank	58_37c	+1	validated	silent	c.111	p.P37	0.000	NULL	NULL	-	no_errors
TRIM39	0	genome.wustl.edu	37	6	30298612	30298612	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	6	30298612	30298612	C	T	SNP	TRIM39	NM_021253.3	human	genbank	58_37c	+1	reviewed	missense	c.508	p.R170C	0.997	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_SPRY,HMMSmart_SM00589,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
WDR47	0	genome.wustl.edu	37	1	109538271	109538271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	1	109538271	109538271	C	T	SNP	WDR47	NM_001142550.1	human	genbank	58_37c	-1	validated	missense	c.1646	p.S549N	1.000	NULL	HMMSmart_SM00320,HMMSmart_SM00667,HMMSmart_SM00668,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
XKR4	0	genome.wustl.edu	37	8	56436404	56436404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	8	56436404	56436404	C	T	SNP	XKR4	NM_052898.1	human	genbank	58_37c	+1	provisional	missense	c.1571	p.P524L	0.977	NULL	HMMPfam_XK-related	-	no_errors
ZNF677	0	genome.wustl.edu	37	19	53741328	53741328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	19	53741328	53741328	C	T	SNP	ZNF677	NM_182609.2	human	genbank	58_37c	-1	provisional	missense	c.652	p.E218K	0.384	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF682	0	genome.wustl.edu	37	19	20116956	20116956	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SN-01A-11D-A142-09	TCGA-A1-A0SN-10B-01D-A142-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1b8d93f4-acc2-48ee-9ca8-a327eb0463c2	14f376b8-4bd0-4931-9ddd-0b4b1cb89137	19	20116956	20116956	C	T	SNP	ZNF682	NM_033196.2	human	genbank	58_37c	-1	validated	missense	c.1355	p.R452H	0.091	superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
