Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ARL4A	0	genome.wustl.edu	37	7	12728294	12728294	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	7	12728294	12728294	A	G	SNP	ARL4A	NM_001037164.1	human	genbank	58_37c	+1	reviewed	missense	c.415	p.R139G	1.000	HMMSmart_SM00173,HMMSmart_SM00175,HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00175,HMMSmart_SM00178,HMMSmart_SM00177,PatternScan_ARF,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ARMC5	0	genome.wustl.edu	37	16	31474092	31474093	+	Splice_Site	DNP	GG	GG	AT	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	GG	GG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	16	31474092	31474093	GG	AT	DNP	ARMC5	ENST00000412665	human	ensembl	58_37c	+1	known	splice_site	c.157-1_157-1	e3-1	1.000:1.000	-	-	-	no_errors
BOD1L	0	genome.wustl.edu	37	4	13601548	13601548	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	4	13601548	13601548	C	T	SNP	BOD1L	NM_148894.2	human	genbank	58_37c	-1	validated	missense	c.6976	p.D2326N	0.378	NULL	HMMPfam_AT_hook,HMMSmart_AT_hook,superfamily_SSF81995	-	no_errors
C2orf16	0	genome.wustl.edu	37	2	27802528	27802528	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	2	27802528	27802528	C	A	SNP	C2orf16	NM_032266.3	human	genbank	58_37c	+1	validated	nonsense	c.3089	p.S1030*	0.128	NULL	NULL	-	no_errors
CDH1	0	genome.wustl.edu	37	16	68867353	68867353	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	16	68867353	68867353	A	G	SNP	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	missense	c.2600	p.N867S	1.000	HMMPfam_Cadherin_C	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
DNAH14	0	genome.wustl.edu	37	1	225306960	225306960	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	1	225306960	225306960	T	G	SNP	DNAH14	NM_001373.1	human	genbank	58_37c	+1	validated	missense	c.4130	p.V1377G	1.000	HMMPfam_DHC_N2	HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_RVT_thumb,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000198888	0	genome.wustl.edu	37	MT	3982	3982	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	MT	3982	3982	G	A	SNP	ENSG00000198888	ENST00000361390	human	ensembl	58_37c	+1	known	missense	c.676	p.A226T	NULL	HMMPfam_NADHdh	HMMPfam_NADHdh,PatternScan_COMPLEX1_ND1_1,PatternScan_COMPLEX1_ND1_2	-	no_stop_codon:mismatch_between_exon_seq_and_reference
ENSG00000232657	0	genome.wustl.edu	37	4	49110449	49110449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	4	49110449	49110449	G	A	SNP	ENSG00000232657	ENST00000417204	human	ensembl	58_37c	-1	known	missense	c.53	p.P18L	0.000	NULL	NULL	-	no_stop_codon
EXOSC9	0	genome.wustl.edu	37	4	122737961	122737961	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	4	122737961	122737961	C	T	SNP	EXOSC9	NM_001034194.1	human	genbank	58_37c	+1	validated	missense	c.1321	p.P441S	1.000	NULL	HMMPfam_RNase_PH,HMMPfam_RNase_PH_C,superfamily_3_ExoRNase,superfamily_Ribosomal_S5_D2-typ_fold	-	no_errors
FAM153B	0	genome.wustl.edu	37	5	175540973	175540973	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	5	175540973	175540973	C	T	SNP	FAM153B	NM_001079529.2	human	genbank	58_37c	+1	validated	missense	c.1085	p.P362L	0.000	NULL	NULL	-	no_errors
GRIN2B	0	genome.wustl.edu	37	12	13715969	13715969	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	12	13715969	13715969	G	T	SNP	GRIN2B	NM_000834.3	human	genbank	58_37c	-1	reviewed	missense	c.4203	p.S1401R	1.000	HMMPfam_NMDAR2_C	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
HDX	0	genome.wustl.edu	37	X	83730290	83730290	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	X	83730290	83730290	T	G	SNP	HDX	NM_144657.4	human	genbank	58_37c	-1	validated	missense	c.116	p.Q39P	1.000	HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	-	no_errors
LOC645382	0	genome.wustl.edu	37	1	13413938	13413938	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	1	13413938	13413938	C	T	SNP	LOC645382	XM_002342051.1	human	genbank	58_37c	+1	model	missense	c.737	p.P246L	0.001	superfamily_RNI-like	superfamily_RNI-like	-	no_errors
LOC646762	0	genome.wustl.edu	37	7	29687056	29687056	+	RNA	SNP	C	A	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	7	29687056	29687056	C	A	SNP	LOC646762	NR_024278.1	human	genbank	58_37c	-1	predicted	rna	NULL	NULL	0.000	-	-	-	no_errors
LOC728310	0	genome.wustl.edu	37	15	29088506	29088523	+	RNA	DEL	CTCCTGATCCCGTAGCTC	CTCCTGATCCCGTAGCTC	-	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	CTCCTGATCCCGTAGCTC	CTCCTGATCCCGTAGCTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	15	29088506	29088523	CTCCTGATCCCGTAGCTC	-	DEL	LOC728310	XR_078490.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.220:0.284:0.294:0.271:0.220:0.227:0.201:0.214:0.229:0.214:0.212:0.219:0.322:0.587:0.890:0.940:0.965:0.985	-	-	-	no_errors
LRRC4C	0	genome.wustl.edu	37	11	40137268	40137268	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	11	40137268	40137268	G	C	SNP	LRRC4C	NM_020929.1	human	genbank	58_37c	-1	validated	missense	c.575	p.A192G	1.000	superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
MAP2K4	0	genome.wustl.edu	37	17	12032516	12032517	+	Frame_Shift_Del	DEL	AC	AC	-	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	17	12032516	12032517	AC	-	DEL	MAP2K4	NM_003010.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.952_953	p.Q319fs	1.000:1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAP3K12	0	genome.wustl.edu	37	12	53876974	53876974	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	12	53876974	53876974	C	T	SNP	MAP3K12	NM_006301.2	human	genbank	58_37c	-1	reviewed	splice_site	c.1515-1	e11-1	1.000	-	-	-	no_errors
MEFV	0	genome.wustl.edu	37	16	3293864	3293864	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	16	3293864	3293864	A	G	SNP	MEFV	NM_000243.2	human	genbank	58_37c	-1	reviewed	silent	c.1788	p.H596	0.911	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY,HMMPfam_PAAD_DAPIN,HMMSmart_SM00589,superfamily_DEATH domain,HMMSmart_SM00449,superfamily_B-box zinc-binding domain	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195505811	195505811	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	3	195505811	195505811	T	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.12256	p.T4086A	0.012	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MYT1L	0	genome.wustl.edu	37	2	1842924	1842924	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	2	1842924	1842924	C	T	SNP	MYT1L	NM_015025.2	human	genbank	58_37c	-1	validated	missense	c.3071	p.R1024H	1.000	HMMPfam_zf-C2HC,superfamily_SSF103637	HMMPfam_zf-C2HC,HMMPfam_MYT1,PatternScan_EF_HAND_1,superfamily_SSF103637	-	no_errors
OR5P2	0	genome.wustl.edu	37	11	7818383	7818384	+	In_Frame_Ins	INS	-	-	ATATGGTTACCAGGTAGATGC	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	11	7818383	7818384	-	ATATGGTTACCAGGTAGATGC	INS	OR5P2	NM_153444.1	human	genbank	58_37c	-1	provisional	in_frame_ins	c.107_106	p.36in_frame_insCIYLVTI	0.001:0.001	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PDS5B	0	genome.wustl.edu	37	13	33247483	33247487	+	Frame_Shift_Del	DEL	TTAAA	TTAAA	-	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	TTAAA	TTAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	13	33247483	33247487	TTAAA	-	DEL	PDS5B	NM_015032.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.836_840	p.L281fs	1.000:1.000:1.000:1.000:1.000	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat,HMMPfam_AT_hook	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A	rs121913273	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	3	178936082	178936082	G	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1624	p.E542K	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POLR2B	0	genome.wustl.edu	37	4	57876368	57876368	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	4	57876368	57876368	T	G	SNP	POLR2B	ENST00000510355	human	ensembl	58_37c	+1	known	splice_site	c.NULL	NULL	0.001	-	-	-	no_coding_region
PRB1	0	genome.wustl.edu	37	12	11506582	11506582	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	12	11506582	11506582	C	T	SNP	PRB1	NM_005039.3	human	genbank	58_37c	-1	reviewed	silent	c.455	p.*152	0.000	NULL	NULL	-	pseudogene
RBMX	0	genome.wustl.edu	37	X	135960146	135960147	+	Frame_Shift_Ins	INS	-	-	AA	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	X	135960146	135960147	-	AA	INS	RBMX	NM_002139.3	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.316_315	p.P105fs	1.000:1.000	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RBM1CTR,superfamily_RNA-binding domain RBD	-	no_errors
RPL21P44	0	genome.wustl.edu	37	4	54852787	54852787	+	RNA	SNP	C	C	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	4	54852787	54852787	C	A	SNP	RPL21P44	NR_027153.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.996	-	-	-	pseudogene
SHANK3	0	genome.wustl.edu	37	22	51121781	51121781	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	22	51121781	51121781	G	A	SNP	SHANK3	NM_001080420.1	human	genbank	58_37c	+1	reviewed	missense	c.899	p.R300H	0.951	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,superfamily_SAM/Pointed domain,HMMPfam_SH3_2	-	no_errors
TNXB	0	genome.wustl.edu	37	6	32041597	32041597	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	6	32041597	32041597	G	T	SNP	TNXB	NM_019105.6	human	genbank	58_37c	-1	reviewed	missense	c.4508	p.S1503Y	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_fn3,HMMSmart_SM00060,HMMSmart_SM00181,superfamily_Fibronectin type III,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578142	7578142	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	17	7578142	7578142	C	A	SNP	TP53	ENST00000414315	human	ensembl	58_37c	-1	known	missense	c.590	p.G197V	0.001	NULL	superfamily_p53-like transcription factors,HMMPfam_P53	-	no_errors
WSCD2	0	genome.wustl.edu	37	12	108618544	108618544	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	12	108618544	108618544	C	T	SNP	WSCD2	NM_014653.2	human	genbank	58_37c	+1	validated	silent	c.711	p.F237	1.000	HMMPfam_WSC,HMMSmart_SM00321	HMMPfam_WSC,HMMSmart_SM00321,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
XIRP2	0	genome.wustl.edu	37	2	168104843	168104843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A1G0-01A-11D-A13L-09	TCGA-A2-A1G0-10A-01D-A13O-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f7eacf95-478d-4d81-a5e3-f5a8938c83ec	eb1176bf-f7d8-4fdf-ae03-a998c8bdc047	2	168104843	168104843	C	T	SNP	XIRP2	NM_152381.4	human	genbank	58_37c	+1	validated	missense	c.6941	p.P2314L	1.000	NULL	HMMPfam_Xin	-	no_errors
