Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA7	0	genome.wustl.edu	37	19	1064218	1064218	+	Missense_Mutation	SNP	C	C	T	rs142315228	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	1064218	1064218	C	T	SNP	ABCA7	NM_019112.3	human	genbank	58_37c	+1	reviewed	missense	c.6010	p.R2004C	0.998	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_tran,HMMSmart_SM00382,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCF2	0	genome.wustl.edu	37	7	150916170	150916170	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	150916170	150916170	C	G	SNP	ABCF2	NM_005692.3	human	genbank	58_37c	-1	reviewed	missense	c.997	p.D333H	1.000	NULL	HMMPfam_ABC_tran,HMMSmart_AAA,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
ADCY9	0	genome.wustl.edu	37	16	4015842	4015842	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	16	4015842	4015842	G	T	SNP	ADCY9	NM_001116.2	human	genbank	58_37c	-1	reviewed	missense	c.3996	p.D1332E	1.000	NULL	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ALG13	0	genome.wustl.edu	37	X	110970673	110970673	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	110970673	110970673	G	T	SNP	ALG13	ENST00000394780	human	ensembl	58_37c	+1	known	missense	c.2090	p.R697L	1.000	NULL	HMMPfam_OTU,HMMPfam_Glyco_tran_28_C,superfamily_SSF53756,superfamily_SSF54001,superfamily_SSF63748	-	no_errors
ALMS1	0	genome.wustl.edu	37	2	73799946	73799946	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	73799946	73799946	G	T	SNP	ALMS1	NM_015120.4	human	genbank	58_37c	+1	reviewed	nonsense	c.10939	p.E3647*	0.993	NULL	NULL	-	no_errors
ANKLE2	0	genome.wustl.edu	37	12	133306491	133306491	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	133306491	133306491	C	G	SNP	ANKLE2	NM_015114.1	human	genbank	58_37c	-1	validated	missense	c.2257	p.D753H	0.000	NULL	superfamily_Ankyrin repeat,HMMPfam_LEM,superfamily_LEM domain	-	no_errors
ASTN1	0	genome.wustl.edu	37	1	176915214	176915214	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	176915214	176915214	G	T	SNP	ASTN1	NM_004319.1	human	genbank	58_37c	-1	validated	nonsense	c.2097	p.C699*	1.000	NULL	HMMSmart_MACPF,HMMSmart_FN3,HMMSmart_EGF,superfamily_FN_III-like	-	no_errors
ATP6AP1	0	genome.wustl.edu	37	X	153662003	153662003	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	153662003	153662003	G	A	SNP	ATP6AP1	NM_001183.4	human	genbank	58_37c	+1	reviewed	silent	c.621	p.L207	1.000	HMMPfam_ATP-synt_S1	HMMPfam_ATP-synt_S1	-	no_errors
ATP7A	0	genome.wustl.edu	37	X	77267266	77267266	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	77267266	77267266	C	A	SNP	ATP7A	ENST00000395563	human	ensembl	58_37c	+1	known	missense	c.856	p.L286I	0.000	NULL	HMMPfam_Hydrolase,HMMPfam_HMA,superfamily_HMA heavy metal-associated domain,HMMPfam_E1-E2_ATPase,PatternScan_HMA_1,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
ATXN2	0	genome.wustl.edu	37	12	111923644	111923644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	111923644	111923644	G	A	SNP	ATXN2	NM_002973.3	human	genbank	58_37c	-1	reviewed	missense	c.2810	p.S937L	0.998	NULL	HMMPfam_LsmAD,HMMPfam_PAM2,superfamily_Sm-like ribonucleoproteins	-	no_errors
B4GALT5	0	genome.wustl.edu	37	20	48260137	48260137	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	20	48260137	48260137	C	G	SNP	B4GALT5	NM_004776.3	human	genbank	58_37c	-1	validated	missense	c.415	p.E139Q	0.918	HMMPfam_Galactosyl_T_2,superfamily_SSF53448	HMMPfam_Galactosyl_T_2,superfamily_SSF53448	-	no_errors
BOD1L	0	genome.wustl.edu	37	4	13605856	13605856	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	4	13605856	13605856	C	G	SNP	BOD1L	NM_148894.2	human	genbank	58_37c	-1	validated	missense	c.2668	p.E890Q	1.000	superfamily_SSF81995	HMMPfam_AT_hook,HMMSmart_AT_hook,superfamily_SSF81995	-	no_errors
BRCA1	0	genome.wustl.edu	37	17	41245484	41245487	+	Frame_Shift_Del	DEL	TGTC	TGTC	-	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	TGTC	TGTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	41245484	41245487	TGTC	-	DEL	BRCA1	NM_007294.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.2064_2061	p.T688fs	0.001:0.000:0.001:0.002	NULL	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
BRD4	0	genome.wustl.edu	37	19	15366988	15366988	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	15366988	15366988	C	G	SNP	BRD4	NM_058243.2	human	genbank	58_37c	-1	reviewed	missense	c.1638	p.K546N	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
C7orf50	0	genome.wustl.edu	37	7	1166897	1166897	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	1166897	1166897	G	C	SNP	C7orf50	NM_001134395.1	human	genbank	58_37c	-1	validated	missense	c.125	p.S42C	0.000	NULL	HMMPfam_DUF2373	-	no_errors
CACNA1A	0	genome.wustl.edu	37	19	13387897	13387897	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	13387897	13387897	C	G	SNP	CACNA1A	NM_001127222.1	human	genbank	58_37c	-1	reviewed	missense	c.3868	p.E1290Q	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_Voltage-gated potassium channels	-	no_errors
CACNA1H	0	genome.wustl.edu	37	16	1254329	1254329	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	16	1254329	1254329	G	A	SNP	CACNA1H	NM_021098.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2322	p.W774*	0.000	superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CCAR1	0	genome.wustl.edu	37	10	70509285	70509286	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	10	70509285	70509286	GA	-	DEL	CCAR1	NM_018237.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.961_962	p.R324fs	1.000:1.000	NULL	HMMPfam_SAP,HMMSmart_SM00513,superfamily_EF-hand,superfamily_SAP domain	-	no_errors
CCDC108	0	genome.wustl.edu	37	2	219895964	219895964	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	219895964	219895964	C	T	SNP	CCDC108	NM_194302.2	human	genbank	58_37c	-1	provisional	silent	c.879	p.G293	0.466	superfamily_PapD-like	PatternScan_MGMT,superfamily_PapD-like	-	no_errors
CDC42BPA	0	genome.wustl.edu	37	1	227261635	227261635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	227261635	227261635	C	T	SNP	CDC42BPA	NM_003607.3	human	genbank	58_37c	-1	reviewed	missense	c.2665	p.E889K	1.000	HMMPfam_DMPK_coil	HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
CHD7	0	genome.wustl.edu	37	8	61765855	61765855	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	8	61765855	61765855	G	C	SNP	CHD7	NM_017780.2	human	genbank	58_37c	+1	reviewed	missense	c.6571	p.E2191Q	0.990	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMPfam_BRK,HMMSmart_SM00592,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
COL6A1	0	genome.wustl.edu	37	21	47402592	47402592	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	21	47402592	47402592	G	T	SNP	COL6A1	NM_001848.2	human	genbank	58_37c	+1	reviewed	missense	c.142	p.V48L	1.000	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Collagen,superfamily_SSF53300	-	no_errors
COL9A1	0	genome.wustl.edu	37	6	70948982	70948982	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	6	70948982	70948982	A	T	SNP	COL9A1	ENST00000447041	human	ensembl	58_37c	-1	known	nonsense	c.477	p.Y159*	0.983	HMMPfam_Collagen	HMMPfam_Collagen	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
CRMP1	0	genome.wustl.edu	37	4	5830394	5830394	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	4	5830394	5830394	G	A	SNP	CRMP1	NM_001014809.1	human	genbank	58_37c	-1	reviewed	missense	c.1625	p.A542V	1.000	superfamily_Metalo_hydrolase	HMMPfam_Amidohydro_1,superfamily_Metalo_hydrolase,superfamily_SSF51556	-	no_errors
CTNNB1	0	genome.wustl.edu	37	3	41280699	41280699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	3	41280699	41280699	G	A	SNP	CTNNB1	NM_001098209.1	human	genbank	58_37c	+1	reviewed	missense	c.2212	p.E738K	1.000	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
CTSF	0	genome.wustl.edu	37	11	66331579	66331579	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	66331579	66331579	C	T	SNP	CTSF	NM_003793.3	human	genbank	58_37c	-1	reviewed	missense	c.1360	p.G454S	1.000	HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,superfamily_SSF54001	PatternScan_THIOL_PROTEASE_CYS,PatternScan_THIOL_PROTEASE_HIS,PatternScan_THIOL_PROTEASE_ASN,HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,HMMPfam_Inhibitor_I29,superfamily_SSF54001	-	no_errors
DENND1A	0	genome.wustl.edu	37	9	126345542	126345542	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	9	126345542	126345542	C	G	SNP	DENND1A	NM_020946.1	human	genbank	58_37c	-1	validated	missense	c.773	p.R258T	1.000	HMMPfam_DENN,HMMSmart_SM00799	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800	-	no_errors
DIAPH3	0	genome.wustl.edu	37	13	60545069	60545069	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	13	60545069	60545069	G	A	SNP	DIAPH3	NM_001042517.1	human	genbank	58_37c	-1	validated	missense	c.1876	p.P626S	0.208	superfamily_Formin homology 2 domain (FH2 domain)	PatternScan_RNASE_PANCREATIC,HMMSmart_SM00498,HMMPfam_Drf_DAD,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)	-	no_errors
DNAJC16	0	genome.wustl.edu	37	1	15890821	15890821	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	15890821	15890821	C	G	SNP	DNAJC16	NM_015291.2	human	genbank	58_37c	+1	provisional	nonsense	c.1565	p.S522*	0.993	NULL	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain,superfamily_Thioredoxin-like,PatternScan_DNAJ_1	-	no_errors
ENSG00000198786	0	genome.wustl.edu	37	MT	14113	14113	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	MT	14113	14113	T	C	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	missense	c.1777	p.F593L	NULL	HMMPfam_NADH5_C	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000205412	0	genome.wustl.edu	37	3	147884471	147884472	+	Splice_Site	INS	-	-	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	3	147884471	147884472	-	C	INS	ENSG00000205412	ENST00000379950	human	ensembl	58_37c	-1	known	splice_site_ins	c.NULL	NULL	0.004:0.003	-	-	-	no_coding_region:pseudogene
ENSG00000210082	0	genome.wustl.edu	37	MT	3200	3200	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	MT	3200	3200	T	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000210100	0	genome.wustl.edu	37	MT	4284	4284	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	MT	4284	4284	G	A	SNP	ENSG00000210100	ENST00000387365	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000250685	0	genome.wustl.edu	37	16	65319157	65319157	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	16	65319157	65319157	G	A	SNP	ENSG00000250685	ENST00000505989	human	ensembl	58_37c	-1	known	rna	NULL	NULL	0.879	-	-	-	no_errors
FAM105B	0	genome.wustl.edu	37	5	14693019	14693019	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	5	14693019	14693019	C	G	SNP	FAM105B	ENST00000506417	human	ensembl	58_37c	+1	known	missense	c.115	p.L39V	0.999	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
FAM115C	0	genome.wustl.edu	37	7	143417083	143417083	+	Missense_Mutation	SNP	T	T	C	rs144677924	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	143417083	143417083	T	C	SNP	FAM115C	NM_001130025.1	human	genbank	58_37c	+1	validated	missense	c.931	p.C311R	0.002	NULL	NULL	-	no_errors
FBXW9	0	genome.wustl.edu	37	19	12800969	12800969	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	12800969	12800969	G	C	SNP	FBXW9	ENST00000380339	human	ensembl	58_37c	-1	known	missense	c.929	p.S310W	0.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00256,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_F-box domain	-	no_errors
FMNL2	0	genome.wustl.edu	37	2	153496517	153496517	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	153496517	153496517	C	T	SNP	FMNL2	NM_052905.3	human	genbank	58_37c	+1	reviewed	missense	c.2992	p.L998F	0.678	HMMSmart_FH2,superfamily_FH2_actin_bd	HMMSmart_FH2,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_FH2_actin_bd	-	no_errors
FNIP2	0	genome.wustl.edu	37	4	159791486	159791486	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	4	159791486	159791486	G	A	SNP	FNIP2	NM_020840.1	human	genbank	58_37c	+1	validated	silent	c.2814	p.Q938	0.002	NULL	NULL	-	no_errors
GABBR2	0	genome.wustl.edu	37	9	101235526	101235526	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	9	101235526	101235526	G	A	SNP	GABBR2	NM_005458.7	human	genbank	58_37c	-1	reviewed	missense	c.901	p.R301C	1.000	HMMPfam_ANF_receptor,superfamily_SSF53822	HMMPfam_ANF_receptor,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_SSF53822	-	no_errors
GFPT2	0	genome.wustl.edu	37	5	179757778	179757778	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	5	179757778	179757778	C	G	SNP	GFPT2	NM_005110.2	human	genbank	58_37c	-1	provisional	silent	c.456	p.L152	1.000	HMMPfam_GATase_2,superfamily_SSF56235	HMMPfam_GATase_2,HMMPfam_SIS,superfamily_SSF53697,superfamily_SSF56235	-	no_errors
GPX4	0	genome.wustl.edu	37	19	1106407	1106407	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	1106407	1106407	C	T	SNP	GPX4	NM_001039847.1	human	genbank	58_37c	+1	reviewed	nonsense	c.532	p.R178*	0.669	NULL	HMMPfam_GSHPx,PatternScan_GLUTATHIONE_PEROXID_2,superfamily_Thioredoxin-like	-	pseudogene
GRM3	0	genome.wustl.edu	37	7	86415885	86415885	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	86415885	86415885	G	A	SNP	GRM3	NM_000840.2	human	genbank	58_37c	+1	reviewed	silent	c.777	p.V259	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_Periplasmic binding protein-like I	-	no_errors
HIPK2	0	genome.wustl.edu	37	7	139299077	139299077	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	139299077	139299077	C	G	SNP	HIPK2	ENST00000263551	human	ensembl	58_37c	-1	known	missense	c.1945	p.D649H	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
HNF1A	0	genome.wustl.edu	37	12	121426687	121426687	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	121426687	121426687	C	A	SNP	HNF1A	NM_000545.5	human	genbank	58_37c	+1	reviewed	missense	c.378	p.H126Q	1.000	HMMPfam_HNF-1_N,superfamily_lambda repressor-like DNA-binding domains	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_HNF-1B_C,HMMPfam_HNF-1A_C,HMMPfam_HNF-1_N,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains,PatternScan_HOMEOBOX_1,superfamily_Dimerization cofactor of HNF-1 alpha	-	no_errors
IDH1	0	genome.wustl.edu	37	2	209113243	209113243	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	209113243	209113243	C	T	SNP	IDH1	NM_005896.2	human	genbank	58_37c	-1	reviewed	silent	c.264	p.L88	1.000	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	HMMPfam_Iso_dh,PatternScan_IDH_IMDH,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	-	no_errors
IGF2R	0	genome.wustl.edu	37	6	160461698	160461698	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	6	160461698	160461698	C	T	SNP	IGF2R	NM_000876.2	human	genbank	58_37c	+1	reviewed	silent	c.1422	p.L474	1.000	HMMPfam_CIMR	HMMPfam_CIMR,HMMPfam_fn2,HMMSmart_SM00059,PatternScan_FN2_1,superfamily_Mannose 6-phosphate receptor domain,superfamily_Kringle-like	-	no_errors
IL20RA	0	genome.wustl.edu	37	6	137330612	137330612	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	6	137330612	137330612	C	A	SNP	IL20RA	NM_014432.2	human	genbank	58_37c	-1	reviewed	nonsense	c.421	p.E141*	0.443	superfamily_Fibronectin type III,HMMPfam_IL10Ra-bind	superfamily_Fibronectin type III,HMMPfam_IL10Ra-bind	-	no_errors
ITGBL1	0	genome.wustl.edu	37	13	102250555	102250555	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	13	102250555	102250555	G	A	SNP	ITGBL1	NM_004791.1	human	genbank	58_37c	+1	provisional	silent	c.921	p.G307	0.999	HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF57196	HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_INTEGRIN_BETA,superfamily_SSF57196	-	no_errors
JUN	0	genome.wustl.edu	37	1	59248385	59248385	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	59248385	59248385	C	A	SNP	JUN	NM_002228.3	human	genbank	58_37c	-1	reviewed	nonsense	c.358	p.E120*	1.000	HMMPfam_Jun	HMMSmart_BRLZ,PatternScan_BZIP_BASIC,HMMPfam_Jun,superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1	-	no_errors
KAL1	0	genome.wustl.edu	37	X	8553307	8553307	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	8553307	8553307	C	A	SNP	KAL1	NM_000216.2	human	genbank	58_37c	-1	reviewed	splice_site	c.856+1	e6+1	1.000	-	-	-	no_errors
KCNQ1	0	genome.wustl.edu	37	11	2591933	2591933	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	2591933	2591933	G	A	SNP	KCNQ1	NM_000218.2	human	genbank	58_37c	+1	reviewed	missense	c.553	p.V185M	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,HMMPfam_KCNQ_channel,superfamily_Voltage-gated potassium channels	-	no_errors
KIAA0195	0	genome.wustl.edu	37	17	73489641	73489641	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	73489641	73489641	G	T	SNP	KIAA0195	NM_014738.4	human	genbank	58_37c	+1	validated	missense	c.2156	p.G719V	1.000	NULL	superfamily_Calcium ATPase transmembrane domain M	-	no_errors
KRBA2	0	genome.wustl.edu	37	17	8272527	8272527	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	8272527	8272527	G	A	SNP	KRBA2	NM_213597.2	human	genbank	58_37c	-1	provisional	silent	c.1404	p.D468	0.000	NULL	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,superfamily_RNaseH_fold	-	no_errors
L1CAM	0	genome.wustl.edu	37	X	153129444	153129444	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	153129444	153129444	G	A	SNP	L1CAM	NM_000425.3	human	genbank	58_37c	-1	reviewed	silent	c.3351	p.F1117	0.915	NULL	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
LGALS1	0	genome.wustl.edu	37	22	38073045	38073045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	22	38073045	38073045	G	A	SNP	LGALS1	NM_002305.3	human	genbank	58_37c	+1	reviewed	missense	c.62	p.R21Q	0.567	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
LILRB2	0	genome.wustl.edu	37	19	54780306	54780306	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	54780306	54780306	C	T	SNP	LILRB2	ENST00000455108	human	ensembl	58_37c	-1	known	missense	c.515	p.R172K	0.004	NULL	HMMSmart_SM00409,superfamily_Immunoglobulin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
LOC100129291	0	genome.wustl.edu	37	X	70884119	70884119	+	RNA	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	70884119	70884119	C	A	SNP	LOC100129291	XR_078592.1	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.331	-	-	-	pseudogene
LOC100289470	0	genome.wustl.edu	37	5	178949688	178949690	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	GAG	GAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	5	178949688	178949690	GAG	-	DEL	LOC100289470	XM_002342585.1	human	genbank	58_37c	+1	model	in_frame_del	c.205_207	p.E70in_frame_del	0.000:0.001:0.000	NULL	NULL	-	no_errors
LOC441666	0	genome.wustl.edu	37	10	42833133	42833135	+	RNA	DEL	ATT	ATT	-	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	ATT	ATT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	10	42833133	42833135	ATT	-	DEL	LOC441666	NR_024380.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	0.966:0.250:0.047	-	-	-	pseudogene
LOC728533	0	genome.wustl.edu	37	19	38282990	38282990	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	38282990	38282990	G	C	SNP	LOC728533	XR_015610.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC729722	0	genome.wustl.edu	37	15	20086520	20086520	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	15	20086520	20086520	A	G	SNP	LOC729722	XM_001716538.2	human	genbank	58_37c	+1	model	missense	c.610	p.T204A	0.001	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
LRGUK	0	genome.wustl.edu	37	7	133863335	133863335	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	133863335	133863335	G	A	SNP	LRGUK	NM_144648.1	human	genbank	58_37c	+1	provisional	silent	c.1188	p.V396	1.000	NULL	HMMPfam_LRR_1,HMMPfam_Guanylate_kin,HMMSmart_GuKc,PatternScan_GUANYLATE_KINASE_1,superfamily_SSF52058,superfamily_SSF52540	-	no_errors
LRP2	0	genome.wustl.edu	37	2	170044543	170044543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	170044543	170044543	C	T	SNP	LRP2	NM_004525.2	human	genbank	58_37c	-1	reviewed	missense	c.9265	p.E3089K	0.906	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
MAP2	0	genome.wustl.edu	37	2	210558835	210558835	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	210558835	210558835	T	C	SNP	MAP2	NM_002374.3	human	genbank	58_37c	+1	reviewed	silent	c.1941	p.D647	0.000	HMMPfam_MAP2_projctn	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP,HMMPfam_MAP2_projctn,HMMPfam_RII_binding_1	-	no_errors
MAP2K4	0	genome.wustl.edu	37	17	12044531	12044531	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	12044531	12044531	T	C	SNP	MAP2K4	NM_003010.2	human	genbank	58_37c	+1	reviewed	missense	c.1154	p.L385P	1.000	superfamily_Kinase_like	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAP2K6	0	genome.wustl.edu	37	17	67537883	67537883	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	67537883	67537883	C	A	SNP	MAP2K6	NM_002758.3	human	genbank	58_37c	+1	reviewed	missense	c.994	p.L332I	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MDM1	0	genome.wustl.edu	37	12	68716927	68716927	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	68716927	68716927	G	C	SNP	MDM1	NM_017440.4	human	genbank	58_37c	-1	reviewed	missense	c.727	p.P243A	1.000	NULL	NULL	-	no_errors
MKI67	0	genome.wustl.edu	37	10	129913274	129913274	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	10	129913274	129913274	T	G	SNP	MKI67	NM_002417.4	human	genbank	58_37c	-1	reviewed	missense	c.1398	p.K466N	0.000	NULL	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain,HMMPfam_K167R	-	no_errors
MNAT1	0	genome.wustl.edu	37	14	61434964	61434964	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	14	61434964	61434964	G	C	SNP	MNAT1	NM_002431.3	human	genbank	58_37c	+1	validated	missense	c.827	p.R276T	1.000	NULL	HMMSmart_SM00184,HMMPfam_MAT1,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
MT-CO2	0	genome.wustl.edu	37	MT	8172	8172	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	MT	8172	8172	G	A	SNP	MT-CO2	ENST00000361739	human	ensembl	58_37c	+1	known	missense	c.587	p.C196Y	NULL	PatternScan_COX2,HMMPfam_COX2,superfamily_Cupredoxins	PatternScan_COX2,HMMPfam_COX2,superfamily_Cupredoxins,HMMPfam_COX2_TM,superfamily_Cytochrome c oxidase subunit II-like transmembrane region	-	mismatch_between_exon_seq_and_reference
MUC2	0	genome.wustl.edu	37	11	1093757	1093757	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	1093757	1093757	C	T	SNP	MUC2	NM_002457.2	human	genbank	58_37c	+1	reviewed	missense	c.5564	p.P1855L	0.035	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_EGF_1,HMMPfam_C8	-	no_errors
MYO1A	0	genome.wustl.edu	37	12	57436929	57436929	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	57436929	57436929	C	T	SNP	MYO1A	NM_005379.2	human	genbank	58_37c	-1	reviewed	missense	c.1025	p.R342Q	1.000	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_TH1,superfamily_SSF52540	-	no_errors
NADK	0	genome.wustl.edu	37	1	1688035	1688035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	1688035	1688035	C	T	SNP	NADK	NM_023018.3	human	genbank	58_37c	-1	validated	missense	c.406	p.V136M	1.000	HMMPfam_NAD_kinase,superfamily_NAD kinase (Pfam 01513)	HMMPfam_NAD_kinase,superfamily_NAD kinase (Pfam 01513)	-	no_errors
NBPF1	0	genome.wustl.edu	37	1	16901095	16901095	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	16901095	16901095	G	C	SNP	NBPF1	NM_017940.3	human	genbank	58_37c	-1	predicted	missense	c.2285	p.S762C	0.005	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors
NCOA3	0	genome.wustl.edu	37	20	46271054	46271054	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	20	46271054	46271054	C	T	SNP	NCOA3	NM_181659.2	human	genbank	58_37c	+1	reviewed	missense	c.3178	p.L1060F	0.691	superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_Nuc_rec_co-act	HMMSmart_SM00091,HMMPfam_HLH,HMMSmart_SM00353,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_DUF1518,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS,HMMPfam_Nuc_rec_co-act,HMMPfam_SRC-1,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
NF1	0	genome.wustl.edu	37	17	29556189	29556189	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	29556189	29556189	C	T	SNP	NF1	NM_001042492.2	human	genbank	58_37c	+1	reviewed	silent	c.2556	p.L852	0.979	NULL	HMMSmart_SM00516,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP	-	no_errors
NLRP7	0	genome.wustl.edu	37	19	55451233	55451233	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	55451233	55451233	G	A	SNP	NLRP7	NM_001127255.1	human	genbank	58_37c	-1	reviewed	silent	c.954	p.Y318	0.000	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00368,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_DEATH domain,superfamily_RNI-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
OR4C15	0	genome.wustl.edu	37	11	55321885	55321885	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	55321885	55321885	T	G	SNP	OR4C15	NM_001001920.1	human	genbank	58_37c	+1	provisional	missense	c.103	p.C35G	0.000	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_LECTIN_LEGUME_ALPHA,superfamily_Family A G protein-coupled receptor-like	-	no_errors
OR51D1	0	genome.wustl.edu	37	11	4661647	4661647	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	4661647	4661647	G	A	SNP	OR51D1	NM_001004751.2	human	genbank	58_37c	+1	validated	silent	c.627	p.V209	0.004	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5D14	0	genome.wustl.edu	37	11	55563055	55563055	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	55563055	55563055	G	A	SNP	OR5D14	NM_001004735.1	human	genbank	58_37c	+1	provisional	silent	c.24	p.L8	0.001	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OSCAR	0	genome.wustl.edu	37	19	54598516	54598516	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	54598516	54598516	C	G	SNP	OSCAR	NM_130771.3	human	genbank	58_37c	-1	reviewed	missense	c.774	p.Q258H	0.004	NULL	HMMSmart_SM00409,superfamily_Immunoglobulin	-	no_errors
PCBP2	0	genome.wustl.edu	37	12	53854905	53854906	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	53854905	53854906	-	T	INS	PCBP2	NM_005016.5	human	genbank	58_37c	+1	reviewed	frame_shift_ins	c.482_483	p.Q161fs	1.000:1.000	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791	-	no_errors
PCDHA9	0	genome.wustl.edu	37	5	140228399	140228399	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	5	140228399	140228399	G	A	SNP	PCDHA9	NM_031857.1	human	genbank	58_37c	+1	reviewed	missense	c.319	p.E107K	1.000	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCDHB4	0	genome.wustl.edu	37	5	140503864	140503864	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	5	140503864	140503864	G	T	SNP	PCDHB4	NM_018938.2	human	genbank	58_37c	+1	reviewed	nonsense	c.2284	p.E762*	1.000	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCIF1	0	genome.wustl.edu	37	20	44574946	44574946	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	20	44574946	44574946	C	T	SNP	PCIF1	NM_022104.3	human	genbank	58_37c	+1	validated	silent	c.1536	p.F512	0.897	NULL	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP	-	no_errors
PCIF1	0	genome.wustl.edu	37	20	44576059	44576059	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	20	44576059	44576059	C	G	SNP	PCIF1	NM_022104.3	human	genbank	58_37c	+1	validated	missense	c.1865	p.S622C	1.000	NULL	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP	-	no_errors
PDS5B	0	genome.wustl.edu	37	13	33315238	33315238	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	13	33315238	33315238	T	G	SNP	PDS5B	NM_015032.3	human	genbank	58_37c	+1	reviewed	silent	c.2427	p.T809	0.986	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat,HMMPfam_AT_hook	-	no_errors
PGK1	0	genome.wustl.edu	37	X	77369391	77369391	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	77369391	77369391	G	A	SNP	PGK1	NM_000291.3	human	genbank	58_37c	+1	reviewed	silent	c.267	p.L89	1.000	HMMPfam_PGK,superfamily_Phosphoglycerate kinase	HMMPfam_PGK,superfamily_Phosphoglycerate kinase,PatternScan_PGLYCERATE_KINASE	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G	rs121913279	byCluster	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
POLR3E	0	genome.wustl.edu	37	16	22337485	22337485	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	16	22337485	22337485	C	T	SNP	POLR3E	NM_018119.2	human	genbank	58_37c	+1	validated	silent	c.1752	p.L584	1.000	NULL	HMMPfam_Sin_N	-	no_errors
PPP1R13B	0	genome.wustl.edu	37	14	104263855	104263855	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	14	104263855	104263855	T	A	SNP	PPP1R13B	NM_015316.2	human	genbank	58_37c	-1	reviewed	missense	c.10	p.M4L	1.000	NULL	HMMPfam_SH3_1,HMMSmart_SH3,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
PRPF40A	0	genome.wustl.edu	37	2	153533228	153533228	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	2	153533228	153533228	A	C	SNP	PRPF40A	NM_017892.3	human	genbank	58_37c	-1	validated	missense	c.722	p.M241R	1.000	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_FF,HMMSmart_SM00441,superfamily_FF domain	-	no_errors
RBBP6	0	genome.wustl.edu	37	16	24579150	24579150	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	16	24579150	24579150	G	A	SNP	RBBP6	NM_006910.4	human	genbank	58_37c	+1	reviewed	missense	c.1990	p.D664N	1.000	NULL	HMMSmart_SM00184,HMMPfam_zf-CCHC,HMMSmart_SM00343,HMMPfam_U-box,HMMPfam_DWNN,superfamily_Retrovirus zinc finger-like domains,superfamily_RING/U-box	-	no_errors
RGS3	0	genome.wustl.edu	37	9	116247927	116247927	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	9	116247927	116247927	C	T	SNP	RGS3	NM_144488.4	human	genbank	58_37c	+1	reviewed	nonsense	c.643	p.Q215*	0.974	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RGS,HMMSmart_SM00315,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Regulator of G-protein signaling RGS,superfamily_PH domain-like	-	no_errors
SCML1	0	genome.wustl.edu	37	X	17768235	17768235	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	17768235	17768235	C	T	SNP	SCML1	NM_001037540.1	human	genbank	58_37c	+1	validated	silent	c.525	p.L175	0.000	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain	-	no_errors
SLC22A16	0	genome.wustl.edu	37	6	110768127	110768127	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	6	110768127	110768127	C	T	SNP	SLC22A16	NM_033125.2	human	genbank	58_37c	-1	provisional	silent	c.600	p.A200	0.099	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
SLC6A5	0	genome.wustl.edu	37	11	20636348	20636348	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	11	20636348	20636348	G	T	SNP	SLC6A5	NM_004211.3	human	genbank	58_37c	+1	reviewed	missense	c.1109	p.G370V	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors
SLITRK1	0	genome.wustl.edu	37	13	84453665	84453665	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	13	84453665	84453665	C	T	SNP	SLITRK1	NM_052910.1	human	genbank	58_37c	-1	reviewed	missense	c.1978	p.E660K	1.000	NULL	HMMSmart_LRRNT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	-	no_errors
SMARCA1	0	genome.wustl.edu	37	X	128602783	128602783	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	128602783	128602783	C	A	SNP	SMARCA1	NM_003069.3	human	genbank	58_37c	-1	reviewed	missense	c.2665	p.G889C	1.000	HMMSmart_SM00717,superfamily_Homeodomain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMSmart_SM00717,HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_Homeodomain-like,HMMSmart_SM00487,HMMPfam_HAND,superfamily_HAND domain of the nucleosome remodeling ATPase ISWI,HMMPfam_SLIDE,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ST3GAL3	0	genome.wustl.edu	37	1	44303968	44303968	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	44303968	44303968	C	T	SNP	ST3GAL3	NM_174963.2	human	genbank	58_37c	+1	reviewed	missense	c.494	p.T165M	0.996	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
TAOK1	0	genome.wustl.edu	37	17	27818872	27818872	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	27818872	27818872	G	T	SNP	TAOK1	NM_020791.1	human	genbank	58_37c	+1	validated	nonsense	c.820	p.E274*	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
TMEM117	0	genome.wustl.edu	37	12	44238546	44238546	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	12	44238546	44238546	C	T	SNP	TMEM117	NM_032256.1	human	genbank	58_37c	+1	provisional	missense	c.92	p.A31V	1.000	NULL	NULL	-	no_errors
TNRC6B	0	genome.wustl.edu	37	22	40704525	40704525	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	22	40704525	40704525	C	T	SNP	TNRC6B	NM_015088.2	human	genbank	58_37c	+1	validated	missense	c.3800	p.S1267F	1.000	NULL	HMMPfam_Ago_hook,superfamily_SSF54928	-	no_errors
TOB1	0	genome.wustl.edu	37	17	48941102	48941103	+	In_Frame_Ins	INS	-	-	AACACT	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	17	48941102	48941103	-	AACACT	INS	TOB1	NM_005749.2	human	genbank	58_37c	-1	reviewed	in_frame_ins	c.277_276	p.92in_frame_insSV	1.000:0.996	HMMPfam_BTG,HMMSmart_SM00099,PatternScan_BTG_2	HMMPfam_BTG,HMMSmart_SM00099,PatternScan_BTG_1,PatternScan_BTG_2	-	no_errors
TSPYL2	0	genome.wustl.edu	37	X	53114174	53114174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	X	53114174	53114174	C	T	SNP	TSPYL2	NM_022117.3	human	genbank	58_37c	+1	reviewed	missense	c.1036	p.R346W	1.000	HMMPfam_NAP	HMMPfam_NAP	-	no_errors
TTC35	0	genome.wustl.edu	37	8	109462671	109462671	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	8	109462671	109462671	G	A	SNP	TTC35	NM_014673.3	human	genbank	58_37c	+1	provisional	missense	c.169	p.E57K	1.000	superfamily_Prenyl_trans	HMMPfam_TPR_2,superfamily_Prenyl_trans	-	no_errors
WDR7	0	genome.wustl.edu	37	18	54354174	54354174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	18	54354174	54354174	C	T	SNP	WDR7	NM_015285.2	human	genbank	58_37c	+1	reviewed	missense	c.686	p.S229L	1.000	HMMSmart_SM00320,superfamily_Prolyl oligopeptidase N-terminal domain	HMMSmart_SM00320,superfamily_Prolyl oligopeptidase N-terminal domain,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
XPR1	0	genome.wustl.edu	37	1	180651527	180651527	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	180651527	180651527	A	G	SNP	XPR1	NM_004736.3	human	genbank	58_37c	+1	validated	missense	c.101	p.D34G	1.000	HMMPfam_SPX	HMMPfam_SPX,HMMPfam_EXS	-	no_errors
ZAN	0	genome.wustl.edu	37	7	100385562	100385596	+	Frame_Shift_Del	DEL	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	7	100385562	100385596	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	DEL	ZAN	NM_003386.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.7030_7064	p.A2344fs	0.013:0.005:0.000:0.001:0.000:0.000:0.005:0.239:0.512:0.532:0.543:0.259:0.193:0.551:0.747:0.746:0.691:0.313:0.001:0.036:0.867:0.876:0.710:0.622:0.357:0.357:0.884:0.969:0.998:1.000:1.000:1.000:1.000:0.989:0.652	NULL	HMMPfam_MAM,HMMSmart_SM00137,PatternScan_MAM_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,PatternScan_EGF_2,HMMPfam_C8,HMMPfam_TIL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ZNF461	0	genome.wustl.edu	37	19	37129791	37129791	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	37129791	37129791	G	A	SNP	ZNF461	NM_153257.2	human	genbank	58_37c	-1	validated	nonsense	c.1456	p.Q486*	0.001	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF461	0	genome.wustl.edu	37	19	37129879	37129879	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	37129879	37129879	G	C	SNP	ZNF461	NM_153257.2	human	genbank	58_37c	-1	validated	silent	c.1368	p.L456	0.063	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF461	0	genome.wustl.edu	37	19	37130138	37130138	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	37130138	37130138	G	C	SNP	ZNF461	NM_153257.2	human	genbank	58_37c	-1	validated	nonsense	c.1109	p.S370*	0.014	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF461	0	genome.wustl.edu	37	19	37130379	37130379	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	37130379	37130379	G	C	SNP	ZNF461	NM_153257.2	human	genbank	58_37c	-1	validated	missense	c.868	p.L290V	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF701	0	genome.wustl.edu	37	19	53086613	53086613	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	53086613	53086613	G	C	SNP	ZNF701	NM_018260.2	human	genbank	58_37c	+1	validated	missense	c.1301	p.G434A	0.889	superfamily_Multiheme cytochromes	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_Multiheme cytochromes,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF792	0	genome.wustl.edu	37	19	35450195	35450195	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	19	35450195	35450195	G	C	SNP	ZNF792	NM_175872.4	human	genbank	58_37c	-1	validated	missense	c.564	p.I188M	0.001	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNHIT6	0	genome.wustl.edu	37	1	86173517	86173517	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	1	86173517	86173517	C	G	SNP	ZNHIT6	NM_017953.3	human	genbank	58_37c	-1	validated	missense	c.451	p.E151Q	0.152	NULL	HMMPfam_zf-HIT	-	no_errors
ZSCAN23	0	genome.wustl.edu	37	6	28403768	28403768	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A7-A26H-01A-11D-A167-09	TCGA-A7-A26H-10A-01D-A167-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fbeade79-28ef-4e85-8282-67e691630ca3	73459869-08fc-408a-bdf0-6ca346113171	6	28403768	28403768	C	T	SNP	ZSCAN23	NM_001012455.1	human	genbank	58_37c	-1	validated	silent	c.276	p.V92	1.000	HMMPfam_SCAN,HMMSmart_SCAN	HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
