Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCA9	10350	genome.wustl.edu	37	17	66982354	66982354	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	66982354	66982354	C	T	SNP	ABCA9	NM_080283.3	human	genbank	58_37c	-1	reviewed	missense	c.4159	p.A1387T	0.503	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCG5	64240	genome.wustl.edu	37	2	44052105	44052105	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	2	44052105	44052105	G	A	SNP	ABCG5	NM_022436.2	human	genbank	58_37c	-1	reviewed	missense	c.827	p.T276M	0.001	superfamily_SSF52540	HMMPfam_ABC_tran,HMMSmart_AAA,HMMPfam_ABC2_membrane,PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540	-	no_errors
AHNAK2	113146	genome.wustl.edu	37	14	105415953	105415953	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	105415953	105415953	G	A	SNP	AHNAK2	NM_138420.2	human	genbank	58_37c	-1	validated	silent	c.5835	p.P1945	0.000	NULL	HMMPfam_Involucrin,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
BTK	695	genome.wustl.edu	37	X	100613405	100613405	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	X	100613405	100613405	C	T	SNP	BTK	NM_000061.2	human	genbank	58_37c	-1	reviewed	missense	c.995	p.R332H	1.000	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	HMMPfam_SH2,HMMSmart_SH2,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_BTK,HMMSmart_BTK,HMMPfam_PH,HMMSmart_PH,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF50729,superfamily_SSF55550	-	no_errors
C1orf124	83932	genome.wustl.edu	37	1	231488908	231488908	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	231488908	231488908	A	G	SNP	C1orf124	NM_032018.4	human	genbank	58_37c	+1	validated	missense	c.1271	p.K424R	0.639	NULL	HMMSmart_SM00731,HMMSmart_SM00734,HMMPfam_SprT-like	-	no_errors
CHD2	1106	genome.wustl.edu	37	15	93545466	93545466	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	93545466	93545466	G	A	SNP	CHD2	NM_001271.3	human	genbank	58_37c	+1	reviewed	silent	c.4197	p.E1399	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_Homeodomain-like,HMMSmart_SM00487,superfamily_Chromo domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CNTNAP1	8506	genome.wustl.edu	37	17	40847561	40847561	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	40847561	40847561	G	A	SNP	CNTNAP1	NM_003632.2	human	genbank	58_37c	+1	reviewed	silent	c.3015	p.P1005	0.019	superfamily_ConA_like_lec_gl	HMMPfam_F5_F8_type_C,HMMSmart_FA58C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_LamG,HMMSmart_FBG,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen_a/b/g_C,HMMSmart_4.1m,HMMPfam_EGF,HMMSmart_EGF,superfamily_Gal_bind_like,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
DAB2IP	153090	genome.wustl.edu	37	9	124521225	124521225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	9	124521225	124521225	G	A	SNP	DAB2IP	NM_032552.2	human	genbank	58_37c	+1	validated	missense	c.481	p.E161K	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_PH domain-like	-	no_errors
DENND1B	163486	genome.wustl.edu	37	1	197611863	197611863	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	197611863	197611863	A	C	SNP	DENND1B	NM_001142795.1	human	genbank	58_37c	-1	validated	missense	c.590	p.I197S	1.000	HMMPfam_DENN,HMMSmart_SM00799	HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_uDENN,HMMSmart_SM00800	-	no_errors
DNAH11	8701	genome.wustl.edu	37	7	21744132	21744132	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	21744132	21744132	T	C	SNP	DNAH11	NM_003777.3	human	genbank	58_37c	+1	reviewed	silent	c.6375	p.G2125	0.995	superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,PatternScan_WD_REPEATS_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOCK8	81704	genome.wustl.edu	37	9	429793	429793	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	9	429793	429793	C	-	DEL	DOCK8	NM_203447.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.4361	p.R1455fs	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
ENSG00000181950	0	genome.wustl.edu	37	11	55235114	55235114	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	55235114	55235114	T	C	SNP	ENSG00000181950	ENST00000314689	human	ensembl	58_37c	+1	known	missense	c.583	p.S195P	0.001	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
ENSG00000219061	0	genome.wustl.edu	37	11	49854765	49854765	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	49854765	49854765	C	A	SNP	ENSG00000219061	ENST00000405176	human	ensembl	58_37c	-1	known	missense	c.1289	p.S430I	0.114	PatternScan_SERPIN,HMMPfam_SPRY	PatternScan_SERPIN,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,HMMPfam_SPRY,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
ENSG00000246966	0	genome.wustl.edu	37	12	70914045	70914046	+	RNA	INS	-	-	AAGT	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	12	70914045	70914046	-	AAGT	INS	ENSG00000246966	ENST00000501222	human	ensembl	58_37c	+1	known	rna	NULL	NULL	0.023:0.026	-	-	-	no_errors
F13A1	2162	genome.wustl.edu	37	6	6206822	6206822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	6206822	6206822	G	A	SNP	F13A1	ENST00000379960	human	ensembl	58_37c	-1	known	missense	c.331	p.P111S	0.008	HMMSmart_SM00460	HMMPfam_Transglut_core,HMMSmart_SM00460,PatternScan_TRANSGLUTAMINASES,superfamily_Cysteine proteinases	-	no_errors
FCGBP	8857	genome.wustl.edu	37	19	40374034	40374034	+	Missense_Mutation	SNP	A	G	G	rs138587194	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	19	40374034	40374034	A	G	SNP	FCGBP	NM_003890.2	human	genbank	58_37c	-1	validated	missense	c.12044	p.V4015A	0.000	HMMSmart_VWC,HMMPfam_TIL_assoc	HMMSmart_VWC,HMMPfam_VWD,HMMSmart_VWD,superfamily_Cysrich_TIL,HMMPfam_TIL_assoc,HMMSmart_FOLN,HMMPfam_C8,HMMPfam_TIL	-	no_errors
FUT2	2524	genome.wustl.edu	37	19	49206810	49206810	+	Silent	SNP	T	T	C	rs150401003	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	19	49206810	49206810	T	C	SNP	FUT2	NM_000511.5	human	genbank	58_37c	+1	reviewed	silent	c.597	p.H199	0.990	HMMPfam_Glyco_transf_11	HMMPfam_Glyco_transf_11	-	no_errors
GJA10	84694	genome.wustl.edu	37	6	90604250	90604250	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	90604250	90604250	G	T	SNP	GJA10	NM_032602.1	human	genbank	58_37c	+1	validated	silent	c.63	p.V21	1.000	HMMPfam_Connexin	HMMPfam_Connexin,HMMSmart_CNX,PatternScan_CONNEXINS_1,PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC	-	no_errors
GPR98	84059	genome.wustl.edu	37	5	90050985	90050985	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	5	90050985	90050985	G	A	SNP	GPR98	NM_032119.3	human	genbank	58_37c	+1	reviewed	missense	c.11563	p.E3855K	0.009	NULL	HMMPfam_GPS,PatternScan_LIPOYL,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMPfam_EPTP,PatternScan_A_DEAMINASE,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
HERC2	8924	genome.wustl.edu	37	15	28421694	28421694	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	28421694	28421694	C	T	SNP	HERC2	NM_004667.4	human	genbank	58_37c	-1	reviewed	missense	c.9566	p.G3189E	1.000	HMMPfam_RCC1,superfamily_RCC1/BLIP-II	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_Cyt-b5,superfamily_Cytochrome b5-like heme/steroid binding domain,HMMSmart_SM00706,superfamily_Galactose-binding domain-like,superfamily_RCC1/BLIP-II,HMMPfam_MIB_HERC2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
HERC2	8924	genome.wustl.edu	37	15	28518115	28518115	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	28518115	28518115	C	A	SNP	HERC2	NM_004667.4	human	genbank	58_37c	-1	reviewed	missense	c.836	p.G279V	1.000	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_Cyt-b5,superfamily_Cytochrome b5-like heme/steroid binding domain,HMMSmart_SM00706,superfamily_Galactose-binding domain-like,superfamily_RCC1/BLIP-II,HMMPfam_MIB_HERC2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
HERC5	51191	genome.wustl.edu	37	4	89390392	89390392	+	Missense_Mutation	SNP	C	C	T	rs145240865	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	4	89390392	89390392	C	T	SNP	HERC5	NM_016323.2	human	genbank	58_37c	+1	reviewed	missense	c.1219	p.R407W	0.204	NULL	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,superfamily_RCC1/BLIP-II	-	no_errors
HPS5	11234	genome.wustl.edu	37	11	18339303	18339303	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	18339303	18339303	G	C	SNP	HPS5	NM_181507.1	human	genbank	58_37c	-1	reviewed	missense	c.103	p.L35V	1.000	NULL	superfamily_WD40 repeat-like	-	no_errors
HTR1F	3355	genome.wustl.edu	37	3	88039975	88039975	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	3	88039975	88039975	G	C	SNP	HTR1F	NM_000866.3	human	genbank	58_37c	+1	validated	missense	c.76	p.V26L	0.970	superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
KIAA1377	57562	genome.wustl.edu	37	11	101829065	101829065	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	101829065	101829065	C	A	SNP	KIAA1377	NM_020802.2	human	genbank	58_37c	+1	validated	missense	c.673	p.L225I	0.998	NULL	NULL	-	no_errors
KRT35	3886	genome.wustl.edu	37	17	39637093	39637093	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	39637093	39637093	C	T	SNP	KRT35	NM_002280.4	human	genbank	58_37c	-1	reviewed	missense	c.257	p.G86D	1.000	NULL	superfamily_Prefoldin,HMMPfam_Filament,PatternScan_IF	-	no_errors
KRTAP10-8	386681	genome.wustl.edu	37	21	46032028	46032028	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	21	46032028	46032028	C	T	SNP	KRTAP10-8	NM_198695.2	human	genbank	58_37c	+1	validated	missense	c.11	p.A4V	0.844	NULL	HMMPfam_Keratin_B2	-	no_errors
LOC100288996	0	genome.wustl.edu	37	15	57976920	57976920	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	57976920	57976920	A	C	SNP	LOC100288996	XM_002343365.1	human	genbank	58_37c	-1	model	missense	c.371	p.V124G	0.000	NULL	NULL	-	no_errors
LRP4	4038	genome.wustl.edu	37	11	46880600	46880600	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	46880600	46880600	T	C	SNP	LRP4	NM_002334.3	human	genbank	58_37c	-1	reviewed	silent	c.5652	p.R1884	0.999	NULL	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin,superfamily_YWTD domain	-	no_errors
LYZL4	131375	genome.wustl.edu	37	3	42448361	42448361	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	3	42448361	42448361	T	G	SNP	LYZL4	NM_144634.2	human	genbank	58_37c	-1	provisional	missense	c.269	p.N90T	1.000	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955	HMMPfam_Lys,HMMSmart_LYZ1,PatternScan_LACTALBUMIN_LYSOZYME_1,superfamily_SSF53955	-	no_errors
MYH4	4622	genome.wustl.edu	37	17	10366448	10366448	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	10366448	10366448	A	G	SNP	MYH4	NM_017533.2	human	genbank	58_37c	-1	validated	missense	c.863	p.I288T	1.000	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540	HMMSmart_IQ,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_SSF52540	-	no_errors
NIN	51199	genome.wustl.edu	37	14	51288724	51288724	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	51288724	51288724	A	C	SNP	NIN	NM_020921.3	human	genbank	58_37c	-1	reviewed	missense	c.51	p.F17L	1.000	HMMPfam_efhand,superfamily_EF-hand	HMMPfam_efhand,superfamily_EF-hand	-	no_errors
OCIAD1	54940	genome.wustl.edu	37	4	48835499	48835499	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	4	48835499	48835499	G	A	SNP	OCIAD1	NM_001079839.2	human	genbank	58_37c	+1	validated	splice_site	c.139+1	e2+1	1.000	-	-	-	no_errors
ODZ4	26011	genome.wustl.edu	37	11	78412585	78412585	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	78412585	78412585	C	T	SNP	ODZ4	NM_001098816.2	human	genbank	58_37c	-1	validated	nonsense	c.5073	p.W1691*	1.000	HMMPfam_RHS_repeat,superfamily_TolB_C	HMMPfam_NHL,HMMSmart_EGF,HMMPfam_RHS_repeat,HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_TolB_C,superfamily_SSF57196	-	no_errors
PCDH15	65217	genome.wustl.edu	37	10	55582296	55582296	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	10	55582296	55582296	A	G	SNP	PCDH15	NM_001142763.1	human	genbank	58_37c	-1	reviewed	silent	c.5211	p.I1737	0.009	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
PCDHGA12	26025	genome.wustl.edu	37	5	140811927	140811927	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	5	140811927	140811927	C	T	SNP	PCDHGA12	NM_003735.2	human	genbank	58_37c	+1	reviewed	missense	c.1601	p.A534V	0.995	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	G	G			TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PTGFR	5737	genome.wustl.edu	37	1	78958991	78958991	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	78958991	78958991	A	C	SNP	PTGFR	NM_000959.3	human	genbank	58_37c	+1	reviewed	missense	c.563	p.Y188S	1.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
RFC1	5981	genome.wustl.edu	37	4	39314522	39314522	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	4	39314522	39314522	T	C	SNP	RFC1	NM_002913.3	human	genbank	58_37c	-1	reviewed	missense	c.1233	p.I411M	0.105	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT,HMMSmart_AAA,HMMPfam_AAA,superfamily_Pol_clamp_load_C,HMMPfam_RFC1,superfamily_SSF52540	-	no_errors
RFPL1S	10740	genome.wustl.edu	37	22	29834086	29834086	+	RNA	DEL	C	C	-	rs58248313	byCluster;byFrequency	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	22	29834086	29834086	C	-	DEL	RFPL1S	NR_002727.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.041	-	-	-	no_errors
RHEB	6009	genome.wustl.edu	37	7	151188068	151188068	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	151188068	151188068	C	T	SNP	RHEB	NM_005614.3	human	genbank	58_37c	-1	reviewed	missense	c.85	p.G29S	1.000	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540	-	no_errors
SGK196	84197	genome.wustl.edu	37	8	42977743	42977743	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	8	42977743	42977743	T	C	SNP	SGK196	NM_032237.3	human	genbank	58_37c	+1	validated	missense	c.776	p.L259P	1.000	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like	-	no_errors
SLC12A1	6557	genome.wustl.edu	37	15	48580714	48580714	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	15	48580714	48580714	G	A	SNP	SLC12A1	NM_000338.2	human	genbank	58_37c	+1	reviewed	splice_site	c.2873+1	e22+1	1.000	-	-	-	no_errors
SLC35F1	222553	genome.wustl.edu	37	6	118556692	118556692	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	118556692	118556692	A	C	SNP	SLC35F1	NM_001029858.3	human	genbank	58_37c	+1	validated	missense	c.370	p.I124L	1.000	HMMPfam_DUF914	HMMPfam_DUF914	-	no_errors
SPTB	6710	genome.wustl.edu	37	14	65216860	65216862	+	In_Frame_Del	DEL	GTT	GTT	-	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	GTT	GTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	14	65216860	65216862	GTT	-	DEL	SPTB	NM_001024858.2	human	genbank	58_37c	-1	reviewed	in_frame_del	c.6615_6613	p.N2205in_frame_del	0.994:1.000:1.000	HMMPfam_PH,HMMSmart_PH,HMMSmart_SPEC,superfamily_SSF50729	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_CH,HMMPfam_PH,HMMSmart_PH,HMMPfam_Spectrin,superfamily_Calponin-homology,HMMSmart_SPEC,superfamily_Spectrin,superfamily_SSF50729	-	no_errors
SSH3	54961	genome.wustl.edu	37	11	67077326	67077326	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	11	67077326	67077326	C	T	SNP	SSH3	NM_017857.3	human	genbank	58_37c	+1	validated	silent	c.1296	p.Y432	0.797	HMMPfam_DSPc,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_DSPc,HMMPfam_DEK_C,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_SM00195,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SYMPK	8189	genome.wustl.edu	37	19	46332317	46332317	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	19	46332317	46332317	G	A	SNP	SYMPK	NM_004819.2	human	genbank	58_37c	-1	reviewed	silent	c.1896	p.A632	0.152	superfamily_ARM repeat	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
TBX18	9096	genome.wustl.edu	37	6	85448248	85448248	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	85448248	85448248	T	G	SNP	TBX18	NM_001080508.1	human	genbank	58_37c	-1	provisional	missense	c.1066	p.T356P	1.000	NULL	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,PatternScan_TBOX_2,PatternScan_TBOX_1	-	no_errors
TEKT5	146279	genome.wustl.edu	37	16	10788482	10788482	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	16	10788482	10788482	G	A	SNP	TEKT5	NM_144674.1	human	genbank	58_37c	-1	provisional	silent	c.249	p.S83	0.000	NULL	HMMPfam_Tektin	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578222	7578223	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	17	7578222	7578223	TC	-	DEL	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.627_626	p.R209fs	0.000:0.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TPR	7175	genome.wustl.edu	37	1	186315302	186315302	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	1	186315302	186315302	C	G	SNP	TPR	NM_003292.2	human	genbank	58_37c	-1	reviewed	missense	c.3061	p.D1021H	1.000	superfamily_Prefoldin	superfamily_Prefoldin,HMMPfam_TPR_MLP1_2	-	no_errors
TSPO2	222642	genome.wustl.edu	37	6	41011722	41011722	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	41011722	41011722	C	T	SNP	TSPO2	NM_001010873.2	human	genbank	58_37c	+1	validated	missense	c.359	p.T120I	0.007	HMMPfam_TspO_MBR	HMMPfam_TspO_MBR	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179408032	179408032	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	2	179408032	179408032	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	nonsense	c.88958	p.W29653*	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179442793	179442793	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	2	179442793	179442793	G	A	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	nonsense	c.60739	p.R20247*	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TXLNB	167838	genome.wustl.edu	37	6	139563701	139563701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	6	139563701	139563701	G	A	SNP	TXLNB	NM_153235.3	human	genbank	58_37c	-1	validated	missense	c.2017	p.R673C	0.016	NULL	HMMPfam_Taxilin	-	no_errors
UPF2	26019	genome.wustl.edu	37	10	12071392	12071392	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	10	12071392	12071392	G	C	SNP	UPF2	NM_015542.2	human	genbank	58_37c	-1	reviewed	nonsense	c.497	p.S166*	1.000	NULL	HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_Upf2,superfamily_ARM repeat	-	no_errors
UPP1	7378	genome.wustl.edu	37	7	48147911	48147911	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	7	48147911	48147911	G	A	SNP	UPP1	NM_003364.2	human	genbank	58_37c	+1	validated	missense	c.890	p.R297Q	0.938	HMMPfam_PNP_UDP_1,superfamily_Purine and uridine phosphorylases	HMMPfam_PNP_UDP_1,PatternScan_PNP_UDP_1,superfamily_Purine and uridine phosphorylases	-	no_errors
ZNF728	388523	genome.wustl.edu	37	19	23185831	23185831	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	19	23185831	23185831	A	T	SNP	ZNF728	XM_001726961.1	human	genbank	58_37c	-1	model	missense	c.2	p.M1K	0.148	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNF831	128611	genome.wustl.edu	37	20	57769143	57769143	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06U-01A-11W-A019-09	TCGA-A8-A06U-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	277c2e8a-dd28-4b8f-96d3-ea790a1986b6	115bb522-26a3-418d-90bb-e786e9c87b88	20	57769143	57769143	G	A	SNP	ZNF831	NM_178457.1	human	genbank	58_37c	+1	provisional	silent	c.3069	p.G1023	0.011	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
