Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
C13orf34	79866	genome.wustl.edu	37	13	73321056	73321056	+	Missense_Mutation	SNP	A	A	T	rs150454213	by1000genomes	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	13	73321056	73321056	A	T	SNP	C13orf34	NM_024808.2	human	genbank	58_37c	+1	validated	missense	c.1289	p.N430I	0.994	NULL	NULL	-	no_errors
C14orf21	161424	genome.wustl.edu	37	14	24774208	24774208	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	14	24774208	24774208	G	A	SNP	C14orf21	NM_174913.1	human	genbank	58_37c	+1	provisional	silent	c.1818	p.L606	0.975	superfamily_ARM-type_fold	HMMPfam_PUF,HMMSmart_Pumilio,superfamily_ARM-type_fold	-	no_errors
CALCR	799	genome.wustl.edu	37	7	93065277	93065278	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	7	93065277	93065278	AG	-	DEL	CALCR	NM_001742.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.1136_1135	p.L379fs	1.000:0.998	HMMPfam_7tm_2,superfamily_SSF81321	HMMPfam_7tm_2,HMMPfam_HRM,HMMSmart_HormR,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_SSF111418,superfamily_SSF81321	-	no_errors
CDH1	999	genome.wustl.edu	37	16	68835596	68835596	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	16	68835596	68835596	C	T	SNP	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	nonsense	c.187	p.R63*	0.175	HMMPfam_Cadherin_pro,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
COL4A1	1282	genome.wustl.edu	37	13	110864808	110864808	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	13	110864808	110864808	C	T	SNP	COL4A1	NM_001845.4	human	genbank	58_37c	-1	reviewed	missense	c.343	p.G115S	1.000	HMMPfam_Collagen	HMMPfam_C4,HMMSmart_SM00111,HMMPfam_Collagen,superfamily_C-type lectin-like	-	no_errors
CSPG4	1464	genome.wustl.edu	37	15	75970186	75970186	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	15	75970186	75970186	G	A	SNP	CSPG4	NM_001897.4	human	genbank	58_37c	-1	reviewed	silent	c.4992	p.P1664	0.000	NULL	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_ATPASE_ALPHA_BETA	-	no_errors
CST2	1470	genome.wustl.edu	37	20	23807084	23807084	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	20	23807084	23807084	G	A	SNP	CST2	NM_001322.2	human	genbank	58_37c	-1	reviewed	nonsense	c.214	p.R72*	0.007	HMMPfam_Cystatin,HMMSmart_CY,superfamily_SSF54403	HMMPfam_Cystatin,HMMSmart_CY,PatternScan_CYSTATIN,superfamily_SSF54403	-	no_errors
DEPDC7	91614	genome.wustl.edu	37	11	33054005	33054005	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	11	33054005	33054005	A	C	SNP	DEPDC7	NM_001077242.1	human	genbank	58_37c	+1	validated	missense	c.1118	p.E373A	1.000	NULL	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
ENSG00000145832	0	genome.wustl.edu	37	5	135207426	135207426	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	5	135207426	135207426	G	A	SNP	ENSG00000145832	ENST00000274513	human	ensembl	58_37c	+1	known	nonsense	c.698	p.W233*	0.006	NULL	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
GON4L	54856	genome.wustl.edu	37	1	155783515	155783515	+	Silent	SNP	C	C	T	rs187289032	by1000genomes	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	1	155783515	155783515	C	T	SNP	GON4L	NM_001037533.1	human	genbank	58_37c	-1	validated	silent	c.1362	p.P454	0.989	NULL	HMMPfam_PAH,superfamily_PAH2 domain,superfamily_Homeodomain-like	-	no_errors
HIF1A	3091	genome.wustl.edu	37	14	62187184	62187184	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	14	62187184	62187184	T	C	SNP	HIF1A	NM_001530.3	human	genbank	58_37c	+1	validated	silent	c.120	p.L40	1.000	HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	HMMSmart_SM00091,HMMSmart_SM00353,HMMSmart_SM00086,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS_3,HMMPfam_HIF-1a_CTAD,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
HIST1H1T	3010	genome.wustl.edu	37	6	26107849	26107849	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	6	26107849	26107849	G	A	SNP	HIST1H1T	NM_005323.3	human	genbank	58_37c	-1	reviewed	missense	c.473	p.A158V	0.000	NULL	HMMPfam_Linker_histone,HMMSmart_H15,superfamily_SSF46785	-	no_errors
HIST1H3G	8355	genome.wustl.edu	37	6	26271482	26271482	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	6	26271482	26271482	G	A	SNP	HIST1H3G	NM_003534.2	human	genbank	58_37c	-1	reviewed	missense	c.131	p.P44L	1.000	HMMSmart_SM00428,superfamily_Histone-fold	HMMSmart_SM00428,PatternScan_HISTONE_H3_1,PatternScan_HISTONE_H3_2,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
HLTF	6596	genome.wustl.edu	37	3	148750058	148750058	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	3	148750058	148750058	G	A	SNP	HLTF	NM_003071.3	human	genbank	58_37c	-1	reviewed	silent	c.2979	p.D993	0.956	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00184,HMMSmart_SM00487,HMMPfam_HIRAN,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_RING/U-box	-	no_errors
HRASLS	57110	genome.wustl.edu	37	3	192988399	192988399	+	Silent	SNP	C	C	A	rs151296838	by1000genomes	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	3	192988399	192988399	C	A	SNP	HRASLS	NM_020386.3	human	genbank	58_37c	+1	validated	silent	c.412	p.R138	1.000	HMMPfam_NC	HMMPfam_NC	-	no_errors
IQSEC3	440073	genome.wustl.edu	37	12	250443	250443	+	Silent	SNP	C	C	T	rs139571026	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	12	250443	250443	C	T	SNP	IQSEC3	NM_015232.1	human	genbank	58_37c	+1	validated	silent	c.1236	p.D412	0.383	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,HMMSmart_PH,superfamily_SSF50729	-	no_errors
KIF7	374654	genome.wustl.edu	37	15	90185484	90185484	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	15	90185484	90185484	G	A	SNP	KIF7	NM_198525.2	human	genbank	58_37c	-1	validated	missense	c.2344	p.R782W	0.986	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LGI1	9211	genome.wustl.edu	37	10	95557009	95557009	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	10	95557009	95557009	G	A	SNP	LGI1	NM_005097.2	human	genbank	58_37c	+1	reviewed	missense	c.1123	p.A375T	0.725	HMMPfam_EPTP	HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_EPTP,superfamily_L domain-like	-	no_errors
LRRK1	79705	genome.wustl.edu	37	15	101605666	101605666	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	15	101605666	101605666	A	G	SNP	LRRK1	NM_024652.3	human	genbank	58_37c	+1	validated	missense	c.5024	p.N1675S	1.000	NULL	HMMSmart_SM00219,HMMPfam_LRR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00220,HMMSmart_SM00369,superfamily_Protein kinase-like (PK-like),HMMPfam_Miro,HMMPfam_Pkinase,HMMSmart_SM00364,superfamily_L domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9056732	9056732	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	19	9056732	9056732	C	T	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	silent	c.30714	p.T10238	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
NEDD4L	23327	genome.wustl.edu	37	18	56063421	56063421	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	18	56063421	56063421	C	G	SNP	NEDD4L	NM_001144967.1	human	genbank	58_37c	+1	validated	missense	c.2848	p.P950A	1.000	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
OPN1LW	5956	genome.wustl.edu	37	X	153416303	153416303	+	Silent	SNP	G	G	A	rs145534803	byCluster;byFrequency;by1000genomes	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	X	153416303	153416303	G	A	SNP	OPN1LW	NM_020061.4	human	genbank	58_37c	+1	reviewed	silent	c.288	p.A96	0.001	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN,superfamily_SSF81321	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PREX2	80243	genome.wustl.edu	37	8	69012077	69012077	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	8	69012077	69012077	A	C	SNP	PREX2	NM_024870.2	human	genbank	58_37c	+1	validated	missense	c.2714	p.K905T	1.000	NULL	"HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_DEP,HMMSmart_SM00049,PatternScan_DH_1,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,superfamily_PH domain-like"	-	no_errors
SLC18A3	6572	genome.wustl.edu	37	10	50820002	50820002	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	10	50820002	50820002	G	A	SNP	SLC18A3	NM_003055.2	human	genbank	58_37c	+1	reviewed	missense	c.1216	p.A406T	1.000	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	-	no_errors
TLX1NB	0	genome.wustl.edu	37	10	102849480	102849480	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	10	102849480	102849480	C	T	SNP	TLX1NB	NM_001085398.1	human	genbank	58_37c	-1	validated	silent	c.183	p.P61	0.013	NULL	NULL	-	no_errors
TMC5	79838	genome.wustl.edu	37	16	19498308	19498308	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	16	19498308	19498308	T	A	SNP	TMC5	NM_001105248.1	human	genbank	58_37c	+1	validated	missense	c.2405	p.M802K	1.000	HMMPfam_TMC	HMMPfam_TMC	-	no_errors
TNFRSF21	27242	genome.wustl.edu	37	6	47253822	47253822	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	6	47253822	47253822	C	T	SNP	TNFRSF21	NM_014452.3	human	genbank	58_37c	-1	reviewed	silent	c.606	p.P202	0.952	HMMSmart_TNFR	HMMPfam_Death,HMMSmart_DEATH,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,superfamily_DEATH_like,superfamily_SSF57586	-	no_errors
TPP2	7174	genome.wustl.edu	37	13	103309552	103309552	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	13	103309552	103309552	G	A	SNP	TPP2	NM_003291.2	human	genbank	58_37c	+1	reviewed	missense	c.3099	p.M1033I	1.000	NULL	HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Pept_S8_S53	-	no_errors
TRIM26	7726	genome.wustl.edu	37	6	30157808	30157808	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	6	30157808	30157808	G	A	SNP	TRIM26	NM_003449.3	human	genbank	58_37c	-1	validated	missense	c.770	p.T257M	1.000	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMPfam_SPRY,HMMSmart_SM00589,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
UBC	7316	genome.wustl.edu	37	12	125396469	125396469	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	12	125396469	125396469	T	G	SNP	UBC	NM_021009.4	human	genbank	58_37c	-1	validated	missense	c.1849	p.T617P	1.000	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like	HMMPfam_ubiquitin,HMMSmart_SM00213,PatternScan_UBIQUITIN_1,superfamily_Ubiquitin-like	-	no_errors
ZBED4	9889	genome.wustl.edu	37	22	50280507	50280507	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	22	50280507	50280507	C	T	SNP	ZBED4	NM_014838.2	human	genbank	58_37c	+1	validated	missense	c.3197	p.S1066L	1.000	NULL	HMMPfam_zf-BED,HMMSmart_SM00614,HMMPfam_hATC	-	no_errors
ZNF586	54807	genome.wustl.edu	37	19	58290700	58290701	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AN-A03Y-01A-21W-A019-09	TCGA-AN-A03Y-10A-01W-A021-09	-	-	-	T	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	f4849adc-b6e8-40bd-9de4-dc5bb37d2a79	c75fcb7d-04da-4c92-a5cd-9a34a370773c	19	58290700	58290701	-	T	INS	ZNF586	NM_017652.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.745_746	p.I250fs	0.010:0.020	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
