Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
BARHL1	56751	genome.wustl.edu	37	9	135458232	135458232	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	9	135458232	135458232	C	T	SNP	BARHL1	NM_020064.3	human	genbank	58_37c	+1	validated	silent	c.48	p.R16	0.879	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
BAT2L2	0	genome.wustl.edu	37	1	171511272	171511272	+	Missense_Mutation	SNP	G	G	A	rs141606555	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	171511272	171511272	G	A	SNP	BAT2L2	NM_015172.3	human	genbank	58_37c	+1	validated	missense	c.4661	p.R1554Q	1.000	NULL	HMMPfam_BAT2_N	-	no_errors
CCNT2	905	genome.wustl.edu	37	2	135704036	135704036	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	2	135704036	135704036	G	A	SNP	CCNT2	ENST00000419781	human	ensembl	58_37c	+1	known	splice_site	c.522+1	e6+1	1.000	-	-	-	no_errors
CD300E	342510	genome.wustl.edu	37	17	72619828	72619828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	17	72619828	72619828	G	A	SNP	CD300E	ENST00000426295	human	ensembl	58_37c	-1	known	missense	c.56	p.P19L	0.000	NULL	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
CDC42BPA	8476	genome.wustl.edu	37	1	227288919	227288919	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	227288919	227288919	G	A	SNP	CDC42BPA	NM_003607.3	human	genbank	58_37c	-1	reviewed	missense	c.2023	p.P675S	1.000	NULL	HMMSmart_PBD,HMMSmart_S_TK_X,HMMPfam_CNH,HMMSmart_CNH,HMMPfam_PH,HMMSmart_PH,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_DMPK_coil,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,PatternScan_C_TYPE_LECTIN_1,superfamily_SSF50729,superfamily_SSF57889	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75884984	75884984	+	Missense_Mutation	SNP	G	G	A	rs149832668	by1000genomes	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	6	75884984	75884984	G	A	SNP	COL12A1	NM_004370.5	human	genbank	58_37c	-1	reviewed	missense	c.2480	p.T827M	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
CSPG4	1464	genome.wustl.edu	37	15	75982428	75982428	+	Silent	SNP	C	T	T	rs7182906	byCluster;byFrequency;by1000genomes	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	15	75982428	75982428	C	T	SNP	CSPG4	NM_001897.4	human	genbank	58_37c	-1	reviewed	silent	c.978	p.G326	0.969	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_ATPASE_ALPHA_BETA	-	no_errors
CUL4B	8450	genome.wustl.edu	37	X	119678367	119678367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	X	119678367	119678367	C	T	SNP	CUL4B	NM_003588.3	human	genbank	58_37c	-1	reviewed	missense	c.1106	p.R369Q	1.000	HMMPfam_Cullin,superfamily_Cullin repeat	"HMMPfam_Cullin,PatternScan_CULLIN_1,HMMSmart_SM00182,superfamily_Cullin homology domain,superfamily_Cullin repeat,HMMPfam_Cullin_Nedd8,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
DNPEP	23549	genome.wustl.edu	37	2	220249154	220249154	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	2	220249154	220249154	A	-	DEL	DNPEP	NM_012100.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.786	p.A263fs	0.803	HMMPfam_Peptidase_M18,superfamily_SSF53187	HMMPfam_Peptidase_M18,superfamily_SSF53187	-	no_errors
FBXO21	23014	genome.wustl.edu	37	12	117612569	117612597	+	Frame_Shift_Del	DEL	AGAGGATTGCAGTACTGGTCAATATATAC	AGAGGATTGCAGTACTGGTCAATATATAC	-	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	AGAGGATTGCAGTACTGGTCAATATATAC	AGAGGATTGCAGTACTGGTCAATATATAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	12	117612569	117612597	AGAGGATTGCAGTACTGGTCAATATATAC	-	DEL	FBXO21	NM_033624.2	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.626_598	p.V200fs	1.000:0.998:0.350:1.000:1.000:0.995:1.000:1.000:1.000:1.000:1.000:0.993:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.886:0.998:0.998:0.950:0.954:0.897:0.143:0.988:0.994	superfamily_F-box domain	HMMPfam_F-box,HMMPfam_YccV-like,superfamily_F-box domain	-	no_errors
GJB3	2707	genome.wustl.edu	37	1	35251060	35251060	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	35251060	35251060	G	A	SNP	GJB3	NM_001005752.1	human	genbank	58_37c	+1	reviewed	missense	c.697	p.A233T	0.000	NULL	HMMPfam_Connexin,HMMSmart_SM00037,PatternScan_CONNEXINS_1,PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC	-	no_errors
HEY1	23462	genome.wustl.edu	37	8	80677554	80677554	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	8	80677554	80677554	A	T	SNP	HEY1	NM_001040708.1	human	genbank	58_37c	-1	reviewed	missense	c.796	p.S266T	1.000	NULL	HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_Hairy_orange,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00511	-	no_errors
HOXA5	3202	genome.wustl.edu	37	7	27182916	27182916	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	7	27182916	27182916	G	A	SNP	HOXA5	NM_019102.2	human	genbank	58_37c	-1	reviewed	missense	c.311	p.S104F	1.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,PatternScan_ANTENNAPEDIA,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
IL9R	3581	genome.wustl.edu	37	X	155227310	155227310	+	RNA	SNP	C	C	G	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	X	155227310	155227310	C	G	SNP	IL9R	NR_024033.1	human	genbank	58_37c	+1	reviewed	rna	NULL	NULL	0.003	-	-	-	no_errors
KLHL15	80311	genome.wustl.edu	37	X	24024161	24024162	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	X	24024161	24024162	-	T	INS	KLHL15	NM_030624.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.650_649	p.T217fs	1.000:1.000	HMMPfam_BACK	HMMSmart_BTB,HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central,superfamily_BTB/POZ_fold,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
KRT2	3849	genome.wustl.edu	37	12	53042056	53042056	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	12	53042056	53042056	G	A	SNP	KRT2	NM_000423.2	human	genbank	58_37c	-1	reviewed	silent	c.1023	p.R341	0.001	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
MAP3K1	4214	genome.wustl.edu	37	5	56178024	56178027	+	Frame_Shift_Del	DEL	AGAT	AGAT	-	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	AGAT	AGAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	5	56178024	56178027	AGAT	-	DEL	MAP3K1	NM_005921.1	human	genbank	58_37c	+1	validated	frame_shift_del	c.2997_3000	p.D1000fs	1.000:1.000:1.000:0.958	NULL	HMMSmart_RING,HMMSmart_S_TKc,HMMPfam_SWIM,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
MDM1	56890	genome.wustl.edu	37	12	68719294	68719294	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	12	68719294	68719294	C	A	SNP	MDM1	NM_017440.4	human	genbank	58_37c	-1	reviewed	missense	c.560	p.R187I	1.000	NULL	NULL	-	no_errors
NCDN	23154	genome.wustl.edu	37	1	36029024	36029024	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	36029024	36029024	T	G	SNP	NCDN	NM_001014839.1	human	genbank	58_37c	+1	reviewed	missense	c.1607	p.I536S	1.000	HMMPfam_Neurochondrin	HMMPfam_Neurochondrin	-	no_errors
OCRL	4952	genome.wustl.edu	37	X	128692912	128692912	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	X	128692912	128692912	G	A	SNP	OCRL	NM_000276.3	human	genbank	58_37c	+1	reviewed	missense	c.656	p.R219Q	1.000	superfamily_DNase I-like	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like,superfamily_GTPase activation domain GAP	-	no_errors
OGDHL	55753	genome.wustl.edu	37	10	50946283	50946283	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	10	50946283	50946283	G	T	SNP	OGDHL	NM_018245.2	human	genbank	58_37c	-1	validated	missense	c.2345	p.P782H	0.994	HMMPfam_Transket_pyr,superfamily_SSF52518	HMMPfam_E1_dh,HMMPfam_Transket_pyr,superfamily_SSF52518	-	no_errors
OR13G1	441933	genome.wustl.edu	37	1	247835571	247835571	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	247835571	247835571	C	T	SNP	OR13G1	NM_001005487.1	human	genbank	58_37c	-1	provisional	missense	c.773	p.R258H	0.823	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PFKL	5211	genome.wustl.edu	37	21	45736395	45736395	+	Silent	SNP	C	T	T	rs139920536	byFrequency	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	21	45736395	45736395	C	T	SNP	PFKL	NM_002626.4	human	genbank	58_37c	+1	reviewed	silent	c.924	p.F308	0.974	HMMPfam_PFK,superfamily_Phosphofructokinase,PatternScan_PHOSPHOFRUCTOKINASE	HMMPfam_PFK,superfamily_Phosphofructokinase,PatternScan_PHOSPHOFRUCTOKINASE	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
SEPT12	124404	genome.wustl.edu	37	16	4829718	4829718	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	16	4829718	4829718	G	A	SNP	SEPT12	NM_144605.3	human	genbank	58_37c	-1	validated	missense	c.796	p.R266W	1.000	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SIPA1L1	26037	genome.wustl.edu	37	14	72055691	72055691	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	14	72055691	72055691	G	T	SNP	SIPA1L1	NM_015556.1	human	genbank	58_37c	+1	provisional	missense	c.1102	p.V368L	1.000	NULL	HMMPfam_Rap_GAP,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,superfamily_Rap/Ran-GAP (Pfam 02145)	-	no_errors
SLC12A9	56996	genome.wustl.edu	37	7	100457800	100457800	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	7	100457800	100457800	G	C	SNP	SLC12A9	NM_020246.2	human	genbank	58_37c	+1	validated	silent	c.1164	p.V388	0.882	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
SLFN12	55106	genome.wustl.edu	37	17	33749142	33749142	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	17	33749142	33749142	G	A	SNP	SLFN12	NM_018042.3	human	genbank	58_37c	-1	validated	silent	c.906	p.V302	0.091	HMMPfam_AAA_4	HMMPfam_AAA_4	-	no_errors
SYDE2	84144	genome.wustl.edu	37	1	85656406	85656406	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	85656406	85656406	T	C	SNP	SYDE2	NM_032184.1	human	genbank	58_37c	-1	validated	missense	c.775	p.M259V	0.065	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
TCN1	6947	genome.wustl.edu	37	11	59629105	59629105	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	11	59629105	59629105	C	T	SNP	TCN1	NM_001062.3	human	genbank	58_37c	-1	reviewed	missense	c.451	p.V151I	0.002	HMMPfam_Cobalamin_bind	HMMPfam_Cobalamin_bind,PatternScan_COBALAMIN_BINDING,PatternScan_ABC_TRANSPORTER_1	-	no_errors
TENC1	23371	genome.wustl.edu	37	12	53457540	53457540	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	12	53457540	53457540	C	T	SNP	TENC1	NM_015319.2	human	genbank	58_37c	+1	reviewed	silent	c.4134	p.F1378	0.948	HMMSmart_PTB,HMMPfam_PTB,superfamily_SSF50729	HMMPfam_SH2,HMMSmart_SH2,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMSmart_PTB,superfamily_C2_CaLB,HMMPfam_PTB,HMMPfam_PTEN_C2,superfamily_SSF50729,superfamily_SSF52799,superfamily_SSF55550,superfamily_SSF57889	-	no_errors
TOR1AIP2	163590	genome.wustl.edu	37	1	179815877	179815877	+	Missense_Mutation	SNP	T	T	G	rs138525986	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	1	179815877	179815877	T	G	SNP	TOR1AIP2	NM_145034.3	human	genbank	58_37c	-1	validated	missense	c.742	p.K248Q	0.389	HMMPfam_LAP1C	HMMPfam_LAP1C	-	no_errors
TTC37	9652	genome.wustl.edu	37	5	94858950	94858950	+	Silent	SNP	T	T	G	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	5	94858950	94858950	T	G	SNP	TTC37	NM_014639.2	human	genbank	58_37c	-1	provisional	silent	c.1713	p.G571	0.085	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_Prenyl_trans	HMMPfam_TPR_1,HMMPfam_Sel1,HMMSmart_SEL1,HMMSmart_TPR,superfamily_Prenyl_trans,superfamily_SSF48452	-	no_errors
WWC1	23286	genome.wustl.edu	37	5	167881097	167881097	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	5	167881097	167881097	G	A	SNP	WWC1	NM_015238.2	human	genbank	58_37c	+1	reviewed	missense	c.2650	p.A884T	0.774	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
ZNF618	114991	genome.wustl.edu	37	9	116764297	116764297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A049-01A-21W-A019-09	TCGA-AN-A049-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1d0c87ef-6840-4051-85d5-7fc2c544578c	0a43cf49-03cc-4aa0-bde2-1107ce131db4	9	116764297	116764297	G	A	SNP	ZNF618	NM_133374.2	human	genbank	58_37c	+1	validated	missense	c.359	p.C120Y	1.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_hATC,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
