Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AADACL4	0	genome.wustl.edu	37	1	12726620	12726620	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	12726620	12726620	C	T	SNP	AADACL4	NM_001013630.1	human	genbank	58_37c	+1	provisional	silent	c.1098	p.R366	0.002	HMMPfam_Abhydrolase_3,superfamily_SSF53474	PatternScan_LIPASE_GDXG_HIS,PatternScan_LIPASE_GDXG_SER,HMMPfam_Abhydrolase_3,superfamily_SSF53474	-	no_errors
ABCC2	0	genome.wustl.edu	37	10	101557000	101557000	+	Missense_Mutation	SNP	G	G	A	rs141855755	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	10	101557000	101557000	G	A	SNP	ABCC2	NM_000392.3	human	genbank	58_37c	+1	reviewed	missense	c.779	p.R260Q	0.300	NULL	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ABCC4	0	genome.wustl.edu	37	13	95861807	95861807	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	13	95861807	95861807	C	A	SNP	ABCC4	NM_005845.3	human	genbank	58_37c	-1	reviewed	silent	c.666	p.A222	0.000	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ACVR2A	0	genome.wustl.edu	37	2	148676044	148676044	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	2	148676044	148676044	A	T	SNP	ACVR2A	NM_001616.3	human	genbank	58_37c	+1	reviewed	missense	c.845	p.N282I	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_Activin_recp,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,superfamily_Snake toxin-like	-	no_errors
ADAMTS2	0	genome.wustl.edu	37	5	178548660	178548660	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	5	178548660	178548660	A	G	SNP	ADAMTS2	NM_014244.2	human	genbank	58_37c	-1	reviewed	splice_site	c.3178+2	e21+2	1.000	-	-	-	no_errors
AFF3	0	genome.wustl.edu	37	2	100194863	100194863	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	2	100194863	100194863	C	T	SNP	AFF3	NM_001025108.1	human	genbank	58_37c	-1	reviewed	silent	c.2919	p.P973	0.649	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
AKD1	0	genome.wustl.edu	37	6	109850199	109850201	+	In_Frame_Del	DEL	AAC	AAC	-	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	AAC	AAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	6	109850199	109850201	AAC	-	DEL	AKD1	ENST00000355283	human	ensembl	58_37c	-1	known	in_frame_del	c.885_883	p.V295in_frame_del	0.003:0.000:0.000	NULL	HMMPfam_ADK,HMMPfam_YHS,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
AOAH	0	genome.wustl.edu	37	7	36552787	36552788	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	7	36552787	36552788	-	G	INS	AOAH	ENST00000431169	human	ensembl	58_37c	-1	known	frame_shift_ins	c.1918_1917	p.Y639fs	0.000:0.000	NULL	HMMPfam_Lipase_GDSL,HMMPfam_SapB_2,HMMSmart_SM00741,superfamily_Saposin,PatternScan_EGF_1	-	no_errors
ATAD2B	0	genome.wustl.edu	37	2	23980928	23980928	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	2	23980928	23980928	T	A	SNP	ATAD2B	NM_017552.1	human	genbank	58_37c	-1	validated	missense	c.3438	p.K1146N	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,PatternScan_BROMODOMAIN_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ATG2B	0	genome.wustl.edu	37	14	96777942	96777942	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	14	96777942	96777942	C	A	SNP	ATG2B	NM_018036.5	human	genbank	58_37c	-1	validated	silent	c.3927	p.V1309	1.000	NULL	HMMPfam_ATG_C	-	no_errors
BAI1	0	genome.wustl.edu	37	8	143560728	143560728	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	8	143560728	143560728	G	A	SNP	BAI1	NM_001702.2	human	genbank	58_37c	+1	reviewed	missense	c.1606	p.V536I	0.869	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_HRM,HMMSmart_SM00008	-	no_errors
BATF3	0	genome.wustl.edu	37	1	212860284	212860284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	212860284	212860284	C	T	SNP	BATF3	NM_018664.2	human	genbank	58_37c	-1	reviewed	missense	c.233	p.R78Q	1.000	HMMSmart_BRLZ,HMMPfam_bZIP_1	HMMSmart_BRLZ,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1	-	no_errors
BTBD12	0	genome.wustl.edu	37	16	3641097	3641097	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	16	3641097	3641097	C	T	SNP	BTBD12	NM_032444.2	human	genbank	58_37c	-1	provisional	missense	c.2542	p.E848K	1.000	NULL	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	-	no_errors
C20orf103	0	genome.wustl.edu	37	20	9510417	9510417	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	20	9510417	9510417	A	T	SNP	C20orf103	NM_012261.2	human	genbank	58_37c	+1	validated	missense	c.793	p.N265Y	1.000	HMMPfam_Lamp	HMMPfam_Lamp,PatternScan_LAMP_1	-	no_errors
C3orf24	0	genome.wustl.edu	37	3	10146113	10146113	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	3	10146113	10146113	C	T	SNP	C3orf24	NM_173472.1	human	genbank	58_37c	-1	validated	missense	c.346	p.G116R	0.996	NULL	NULL	-	no_errors
C7orf57	0	genome.wustl.edu	37	7	48080992	48080992	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	7	48080992	48080992	C	T	SNP	C7orf57	NM_001100159.1	human	genbank	58_37c	+1	validated	silent	c.117	p.S39	0.994	NULL	NULL	-	no_errors
CFH	0	genome.wustl.edu	37	1	196696041	196696041	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	196696041	196696041	G	C	SNP	CFH	NM_000186.3	human	genbank	58_37c	+1	reviewed	missense	c.2207	p.G736A	0.966	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	-	no_errors
CFHR5	0	genome.wustl.edu	37	1	196973945	196973945	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	196973945	196973945	A	G	SNP	CFHR5	NM_030787.3	human	genbank	58_37c	+1	reviewed	silent	c.1485	p.K495	0.050	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module	-	no_errors
CNBD1	0	genome.wustl.edu	37	8	87878778	87878778	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	8	87878778	87878778	A	G	SNP	CNBD1	NM_173538.2	human	genbank	58_37c	+1	provisional	missense	c.55	p.N19D	0.670	NULL	HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_cNMP_binding	-	no_errors
CNTNAP3	0	genome.wustl.edu	37	9	39177396	39177396	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	9	39177396	39177396	C	T	SNP	CNTNAP3	NM_033655.3	human	genbank	58_37c	-1	reviewed	silent	c.846	p.T282	0.000	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_SM00282,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Galactose-binding domain-like,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_GLYCO_HORMONE_BETA_1	-	no_errors
COL4A6	0	genome.wustl.edu	37	X	107435784	107435784	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	X	107435784	107435784	C	A	SNP	COL4A6	NM_001847.2	human	genbank	58_37c	-1	reviewed	missense	c.1102	p.G368C	0.978	HMMPfam_Collagen	HMMPfam_C4,HMMSmart_SM00111,HMMPfam_Collagen,superfamily_C-type lectin-like	-	no_errors
DBR1	0	genome.wustl.edu	37	3	137886067	137886067	+	Silent	SNP	A	A	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	3	137886067	137886067	A	C	SNP	DBR1	NM_016216.2	human	genbank	58_37c	-1	validated	silent	c.570	p.L190	0.963	HMMPfam_Metallophos,superfamily_Metallo-dependent phosphatases	HMMPfam_Metallophos,HMMPfam_DBR1,superfamily_Metallo-dependent phosphatases	-	no_errors
DNAH7	0	genome.wustl.edu	37	2	196762433	196762433	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	2	196762433	196762433	T	C	SNP	DNAH7	NM_018897.2	human	genbank	58_37c	-1	validated	silent	c.4605	p.V1535	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_ADH_SHORT,HMMSmart_SM00382,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N2,PatternScan_EF_HAND_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DSCAM	0	genome.wustl.edu	37	21	42080507	42080507	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	21	42080507	42080507	G	A	SNP	DSCAM	NM_001389.3	human	genbank	58_37c	-1	validated	silent	c.234	p.N78	1.000	HMMSmart_SM00408,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
EDA	0	genome.wustl.edu	37	X	68836476	68836476	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	X	68836476	68836476	G	A	SNP	EDA	NM_001399.4	human	genbank	58_37c	+1	reviewed	silent	c.324	p.Q108	0.097	NULL	HMMPfam_TNF,HMMPfam_Collagen,superfamily_TNF-like	-	no_errors
EIF5	0	genome.wustl.edu	37	14	103803551	103803551	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	14	103803551	103803551	C	G	SNP	EIF5	NM_001969.3	human	genbank	58_37c	+1	validated	silent	c.426	p.L142	1.000	NULL	HMMPfam_eIF-5_eIF-2B,HMMSmart_SM00653,HMMPfam_W2,HMMSmart_SM00515,superfamily_ARM repeat,superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain,superfamily_Zinc-binding domain of translation initiation factor 2 beta	-	no_errors
ENSG00000198886	0	genome.wustl.edu	37	MT	11649	11649	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	MT	11649	11649	T	C	SNP	ENSG00000198886	ENST00000361381	human	ensembl	58_37c	+1	known	missense	c.890	p.V297A	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000224343	0	genome.wustl.edu	37	6	160132627	160132627	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	6	160132627	160132627	A	C	SNP	ENSG00000224343	ENST00000442642	human	ensembl	58_37c	-1	known	nonsense	c.324	p.Y108*	0.000	NULL	NULL	-	no_start_codon
ENSG00000231972	0	genome.wustl.edu	37	15	92292542	92292542	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	15	92292542	92292542	G	C	SNP	ENSG00000231972	ENST00000419607	human	ensembl	58_37c	+1	known	missense	c.13	p.G5R	0.076	NULL	NULL	-	no_start_codon:no_stop_codon
FAM171A1	0	genome.wustl.edu	37	10	15256166	15256166	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	10	15256166	15256166	C	A	SNP	FAM171A1	NM_001010924.1	human	genbank	58_37c	-1	validated	missense	c.1421	p.R474I	0.019	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FASN	0	genome.wustl.edu	37	17	80051484	80051486	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	GAA	GAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	17	80051484	80051486	GAA	-	DEL	FASN	NM_004104.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.444_442	p.F148in_frame_del	0.962:1.000:1.000	HMMPfam_ketoacyl-synt,superfamily_Thiolase-like	HMMPfam_Thioesterase,HMMPfam_adh_short,PatternScan_PHOSPHOPANTETHEINE,HMMPfam_PP-binding,superfamily_ACP-like,superfamily_GroES-like,HMMPfam_ADH_zinc_N,HMMPfam_Methyltransf_12,HMMPfam_ketoacyl-synt,HMMPfam_Ketoacyl-synt_C,HMMPfam_Acyl_transf_1,superfamily_FabD/lysophospholipase-like,superfamily_Probable ACP-binding domain of malonyl-CoA ACP transacylase,superfamily_Thiolase-like,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_B_KETOACYL_SYNTHASE,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_alpha/beta-Hydrolases	-	no_errors
FBXL7	0	genome.wustl.edu	37	5	15928218	15928218	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	5	15928218	15928218	G	A	SNP	FBXL7	NM_012304.3	human	genbank	58_37c	+1	reviewed	missense	c.347	p.R116Q	1.000	HMMPfam_F-box	HMMPfam_F-box,HMMSmart_SM00256,HMMSmart_SM00367,superfamily_RNI-like	-	no_errors
FRMPD2	0	genome.wustl.edu	37	10	49450274	49450274	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	10	49450274	49450274	G	A	SNP	FRMPD2	NM_001018071.3	human	genbank	58_37c	-1	reviewed	missense	c.497	p.S166F	0.464	HMMSmart_SM00750	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00750,HMMPfam_FERM_N,HMMPfam_FERM_C,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like,superfamily_Ubiquitin-like	-	no_errors
GLP2R	0	genome.wustl.edu	37	17	9739689	9739689	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	17	9739689	9739689	C	A	SNP	GLP2R	NM_004246.1	human	genbank	58_37c	+1	reviewed	silent	c.279	p.G93	0.000	HMMPfam_HRM,superfamily_SSF111418	HMMPfam_7tm_2,HMMPfam_HRM,PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_SSF111418	-	no_errors
IGHV4-61	0	genome.wustl.edu	37	14	107095423	107095423	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	14	107095423	107095423	G	A	SNP	IGHV4-61	ENST00000390630	human	ensembl	58_37c	-1	known	silent	c.57	p.S19	0.987	NULL	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	-	no_stop_codon
KIF5A	0	genome.wustl.edu	37	12	57957940	57957940	+	Missense_Mutation	SNP	G	G	A	rs144277716	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	12	57957940	57957940	G	A	SNP	KIF5A	NM_004984.2	human	genbank	58_37c	+1	reviewed	missense	c.341	p.R114Q	0.987	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_Prefoldin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KLC3	0	genome.wustl.edu	37	19	45848976	45848976	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	19	45848976	45848976	C	T	SNP	KLC3	NM_177417.2	human	genbank	58_37c	+1	reviewed	silent	c.177	p.A59	0.001	NULL	HMMPfam_TPR_1,HMMPfam_Rab5-bind,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors
LAMC1	0	genome.wustl.edu	37	1	183090900	183090900	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	183090900	183090900	C	T	SNP	LAMC1	NM_002293.3	human	genbank	58_37c	+1	reviewed	missense	c.2033	p.P678L	0.985	HMMPfam_Laminin_B,superfamily_Grow_fac_recept,HMMSmart_LamB	HMMPfam_Laminin_B,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Grow_fac_recept,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_LamB,superfamily_SSF57196	-	no_errors
LOC100287541	0	genome.wustl.edu	37	22	18843242	18843242	+	Missense_Mutation	SNP	C	C	G	rs140437	byHapMap	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	22	18843242	18843242	C	G	SNP	LOC100287541	XM_002344189.1	human	genbank	58_37c	+1	model	missense	c.358	p.H120D	0.997	NULL	PatternScan_PHOSPHOPANTETHEINE	-	no_errors
LOC100287759	0	genome.wustl.edu	37	9	66454773	66454773	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	9	66454773	66454773	C	A	SNP	LOC100287759	XM_002342919.1	human	genbank	58_37c	-1	model	missense	c.182	p.G61V	0.016	NULL	NULL	-	no_errors
LOC100288229	0	genome.wustl.edu	37	17	43626297	43626299	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	17	43626297	43626299	CTT	-	DEL	LOC100288229	XM_002343565.1	human	genbank	58_37c	-1	model	in_frame_del	c.1405_1403	p.E468in_frame_del	0.000:0.000:0.002	NULL	NULL	-	no_errors
LOC442308	0	genome.wustl.edu	37	7	55714207	55714207	+	RNA	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	7	55714207	55714207	G	A	SNP	LOC442308	NR_003598.1	human	genbank	58_37c	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC91316	0	genome.wustl.edu	37	22	24037483	24037483	+	RNA	SNP	A	T	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	22	24037483	24037483	A	T	SNP	LOC91316	NR_024448.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	pseudogene
MAGED1	0	genome.wustl.edu	37	X	51640687	51640687	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	X	51640687	51640687	G	T	SNP	MAGED1	NM_001005333.1	human	genbank	58_37c	+1	reviewed	nonsense	c.1699	p.E567*	1.000	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MUC12	0	genome.wustl.edu	37	7	100643080	100643080	+	Missense_Mutation	SNP	C	C	T	rs139875131	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	7	100643080	100643080	C	T	SNP	MUC12	ENST00000379442	human	ensembl	58_37c	+1	known	missense	c.9665	p.T3222M	0.000	NULL	HMMPfam_SEA,HMMSmart_SEA,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
NBEAL1	0	genome.wustl.edu	37	2	204030948	204030948	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	2	204030948	204030948	G	T	SNP	NBEAL1	NM_001114132.1	human	genbank	58_37c	+1	validated	missense	c.5704	p.V1902L	0.553	superfamily_PH domain-like	HMMPfam_Beach,superfamily_BEACH domain,HMMSmart_SM00320,PatternScan_5_NUCLEOTIDASE_1,superfamily_WD40 repeat-like,superfamily_ARM repeat,HMMPfam_WD40,superfamily_PH domain-like	-	no_errors
NUFIP2	0	genome.wustl.edu	37	17	27621071	27621071	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	17	27621071	27621071	C	G	SNP	NUFIP2	NM_020772.2	human	genbank	58_37c	-1	validated	missense	c.7	p.E3Q	1.000	NULL	NULL	-	no_errors
OR52E8	0	genome.wustl.edu	37	11	5878074	5878074	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	11	5878074	5878074	C	G	SNP	OR52E8	NM_001005168.1	human	genbank	58_37c	-1	provisional	missense	c.859	p.V287L	0.038	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR5B3	0	genome.wustl.edu	37	11	58170702	58170702	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	11	58170702	58170702	G	C	SNP	OR5B3	NM_001005469.1	human	genbank	58_37c	-1	validated	missense	c.181	p.L61V	0.999	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PCSK5	0	genome.wustl.edu	37	9	78789962	78789962	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	9	78789962	78789962	C	G	SNP	PCSK5	NM_006200.3	human	genbank	58_37c	+1	reviewed	missense	c.1817	p.T606S	1.000	NULL	HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Subtilisin-like,HMMPfam_P_proprotein,HMMSmart_SM00261,superfamily_Galactose-binding domain-like,superfamily_Protease propeptides/inhibitors,superfamily_Growth factor receptor domain,HMMPfam_PLAC	-	no_errors
PUS1	0	genome.wustl.edu	37	12	132426329	132426329	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	12	132426329	132426329	G	A	SNP	PUS1	NM_025215.5	human	genbank	58_37c	+1	reviewed	missense	c.1037	p.R346H	1.000	superfamily_Pseudouridine synthase	HMMPfam_PseudoU_synth_1,superfamily_Pseudouridine synthase	-	no_errors
RPS6KB2	0	genome.wustl.edu	37	11	67196636	67196636	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	11	67196636	67196636	G	A	SNP	RPS6KB2	NM_003952.2	human	genbank	58_37c	+1	reviewed	silent	c.165	p.V55	1.000	superfamily_Kinase_like	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
SCCPDH	0	genome.wustl.edu	37	1	246890254	246890254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	246890254	246890254	C	T	SNP	SCCPDH	NM_016002.2	human	genbank	58_37c	+1	validated	missense	c.251	p.S84L	1.000	HMMPfam_Saccharop_dh,superfamily_NAD(P)-bd	HMMPfam_Saccharop_dh,superfamily_NAD(P)-bd	-	no_errors
SEPT7P2	0	genome.wustl.edu	37	7	45767787	45767787	+	RNA	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	7	45767787	45767787	G	A	SNP	SEPT7P2	NR_024271.1	human	genbank	58_37c	-1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
SLC4A11	0	genome.wustl.edu	37	20	3209652	3209652	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	20	3209652	3209652	A	C	SNP	SLC4A11	NM_032034.3	human	genbank	58_37c	-1	reviewed	missense	c.2072	p.V691G	1.000	HMMPfam_HCO3_cotransp	HMMPfam_HCO3_cotransp,superfamily_Phoshotransferase/anion transport protein	-	no_errors
SPTA1	0	genome.wustl.edu	37	1	158604413	158604413	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	158604413	158604413	C	G	SNP	SPTA1	NM_003126.2	human	genbank	58_37c	-1	reviewed	missense	c.5485	p.E1829Q	1.000	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Spectrin,HMMPfam_efhand_Ca_insen,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
TROVE2	0	genome.wustl.edu	37	1	193038629	193038629	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	1	193038629	193038629	C	T	SNP	TROVE2	NM_004600.5	human	genbank	58_37c	+1	validated	missense	c.445	p.R149W	1.000	HMMPfam_TROVE	HMMPfam_TROVE	-	no_errors
TTN	0	genome.wustl.edu	37	2	179497253	179497253	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	2	179497253	179497253	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.35776	p.G11926R	1.000	HMMSmart_SM00409	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TUBA3C	0	genome.wustl.edu	37	13	19752468	19752468	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	13	19752468	19752468	T	A	SNP	TUBA3C	NM_006001.1	human	genbank	58_37c	-1	reviewed	missense	c.293	p.D98V	1.000	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like	HMMPfam_Tubulin,superfamily_Tubulin C-terminal domain-like,PatternScan_TUBULIN,HMMPfam_Tubulin_C,superfamily_Tubulin nucleotide-binding domain-like	-	no_errors
USP32	0	genome.wustl.edu	37	17	58288421	58288421	+	Missense_Mutation	SNP	C	C	T	rs146577219	byFrequency	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	17	58288421	58288421	C	T	SNP	USP32	NM_032582.3	human	genbank	58_37c	-1	validated	missense	c.2377	p.E793K	1.000	HMMPfam_UCH,superfamily_SSF54001	HMMPfam_UCH,HMMSmart_EFh,HMMSmart_DUSP,HMMPfam_DUF1055,PatternScan_UCH_2_1,PatternScan_UCH_2_2,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473,superfamily_SSF54001	-	no_errors
VPS13B	0	genome.wustl.edu	37	8	100832306	100832306	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	8	100832306	100832306	C	T	SNP	VPS13B	NM_017890.3	human	genbank	58_37c	+1	reviewed	silent	c.9025	p.L3009	1.000	NULL	PatternScan_ZINC_PROTEASE	-	no_errors
WWC2	0	genome.wustl.edu	37	4	184129264	184129264	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	4	184129264	184129264	C	T	SNP	WWC2	NM_024949.5	human	genbank	58_37c	+1	validated	nonsense	c.400	p.R134*	0.995	NULL	HMMPfam_C2,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
ZFP92	0	genome.wustl.edu	37	X	152686448	152686448	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	X	152686448	152686448	G	A	SNP	ZFP92	NM_001136273.1	human	genbank	58_37c	+1	validated	missense	c.613	p.E205K	0.999	superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF284	0	genome.wustl.edu	37	19	44590278	44590278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	19	44590278	44590278	C	T	SNP	ZNF284	NM_001037813.2	human	genbank	58_37c	+1	provisional	missense	c.647	p.S216L	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF547	0	genome.wustl.edu	37	19	57883271	57883271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A1F2-01A-31D-A13L-09	TCGA-BH-A1F2-11A-32D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a5c67494-d843-4b14-ba9c-d077396ed2dc	3b15c929-09bb-49b8-914c-b0a5e32ddd3e	19	57883271	57883271	C	T	SNP	ZNF547	NM_173631.2	human	genbank	58_37c	+1	validated	missense	c.146	p.S49L	0.042	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
