Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACP5	54	genome.wustl.edu	37	19	11685975	11685975	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	19	11685975	11685975	G	A	SNP	ACP5	NM_001111034.1	human	genbank	58_37c	-1	reviewed	silent	c.828	p.N276	0.001	superfamily_SSF56300	HMMPfam_Metallophos,superfamily_SSF56300	-	no_errors
BPIL2	254240	genome.wustl.edu	37	22	32815386	32815386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	22	32815386	32815386	C	T	SNP	BPIL2	NM_174932.2	human	genbank	58_37c	-1	validated	missense	c.1223	p.R408H	1.000	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,superfamily_Bactericidal_perm-incr_a/b_dom	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,HMMPfam_LBP_BPI_CETP,HMMSmart_BPI1,superfamily_Bactericidal_perm-incr_a/b_dom,PatternScan_LBP_BPI_CETP	-	no_errors
BRCC3	79184	genome.wustl.edu	37	X	154317544	154317544	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	154317544	154317544	G	A	SNP	BRCC3	NM_024332.2	human	genbank	58_37c	+1	reviewed	missense	c.410	p.R137H	1.000	HMMPfam_Mov34,HMMSmart_SM00232,superfamily_JAB1/MPN domain	HMMPfam_Mov34,HMMSmart_SM00232,superfamily_JAB1/MPN domain	-	no_errors
CCDC91	55297	genome.wustl.edu	37	12	28459679	28459679	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	12	28459679	28459679	A	C	SNP	CCDC91	NM_018318.3	human	genbank	58_37c	+1	validated	missense	c.272	p.Q91P	1.000	NULL	NULL	-	no_errors
CFP	5199	genome.wustl.edu	37	X	47489181	47489181	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	47489181	47489181	G	C	SNP	CFP	NM_001145252.1	human	genbank	58_37c	-1	reviewed	silent	c.63	p.T21	0.162	NULL	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1	-	no_errors
CRKL	1399	genome.wustl.edu	37	22	21272296	21272296	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	22	21272296	21272296	A	G	SNP	CRKL	NM_005207.3	human	genbank	58_37c	+1	reviewed	missense	c.74	p.Q25R	1.000	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2,superfamily_SH2 domain	-	no_errors
DBN1	1627	genome.wustl.edu	37	5	176885058	176885058	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	5	176885058	176885058	C	G	SNP	DBN1	NM_080881.2	human	genbank	58_37c	-1	reviewed	splice_site	c.1782+1	e12+1	1.000	-	-	-	no_errors
DCUN1D2	55208	genome.wustl.edu	37	13	114128499	114128499	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	13	114128499	114128499	A	G	SNP	DCUN1D2	NM_001014283.1	human	genbank	58_37c	-1	validated	missense	c.460	p.F154L	1.000	HMMPfam_DUF298	HMMPfam_DUF298,superfamily_UBA-like	-	no_errors
DNAH14	127602	genome.wustl.edu	37	1	225568025	225568025	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	1	225568025	225568025	G	A	SNP	DNAH14	NM_001373.1	human	genbank	58_37c	+1	validated	splice_site	c.12574+1	e77+1	1.000	-	-	-	no_errors
DUSP27	92235	genome.wustl.edu	37	1	167095568	167095568	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	1	167095568	167095568	C	T	SNP	DUSP27	NM_001080426.1	human	genbank	58_37c	+1	provisional	silent	c.1200	p.N400	0.988	NULL	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799	-	no_errors
ELP2	55250	genome.wustl.edu	37	18	33721133	33721133	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	18	33721133	33721133	G	C	SNP	ELP2	NM_018255.1	human	genbank	58_37c	+1	provisional	missense	c.557	p.R186T	0.992	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
ENSG00000205011	0	genome.wustl.edu	37	2	48757097	48757097	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	48757097	48757097	C	T	SNP	ENSG00000205011	ENST00000378305	human	ensembl	58_37c	+1	known	missense	c.100	p.R34W	0.002	NULL	NULL	-	no_errors
HACE1	57531	genome.wustl.edu	37	6	105244542	105244542	+	Silent	SNP	G	C	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	6	105244542	105244542	G	C	SNP	HACE1	NM_020771.3	human	genbank	58_37c	-1	validated	silent	c.804	p.L268	0.198	NULL	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
HAUS5	23354	genome.wustl.edu	37	19	36110392	36110392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	19	36110392	36110392	C	T	SNP	HAUS5	NM_015302.1	human	genbank	58_37c	+1	validated	missense	c.1246	p.R416W	0.958	NULL	NULL	-	no_errors
HIST1H3C	8352	genome.wustl.edu	37	6	26045726	26045726	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	6	26045726	26045726	G	C	SNP	HIST1H3C	NM_003531.2	human	genbank	58_37c	+1	reviewed	missense	c.88	p.A30P	1.000	superfamily_Histone-fold	HMMSmart_SM00428,PatternScan_HISTONE_H3_1,PatternScan_HISTONE_H3_2,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
ISLR	3671	genome.wustl.edu	37	15	74468053	74468053	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	15	74468053	74468053	T	C	SNP	ISLR	NM_005545.3	human	genbank	58_37c	+1	validated	missense	c.854	p.V285A	0.026	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726	HMMSmart_LRRNT,HMMPfam_LRRCT,HMMSmart_LRRCT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726,superfamily_SSF52058	-	no_errors
KIAA0922	23240	genome.wustl.edu	37	4	154547305	154547305	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	4	154547305	154547305	G	T	SNP	KIAA0922	NM_015196.3	human	genbank	58_37c	+1	validated	missense	c.4049	p.S1350I	0.000	NULL	NULL	-	no_errors
KIF4A	24137	genome.wustl.edu	37	X	69510350	69510350	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	69510350	69510350	G	T	SNP	KIF4A	NM_012310.4	human	genbank	58_37c	+1	reviewed	silent	c.42	p.L14	1.000	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KIFC2	90990	genome.wustl.edu	37	8	145692700	145692700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	8	145692700	145692700	C	T	SNP	KIFC2	NM_145754.2	human	genbank	58_37c	+1	provisional	missense	c.445	p.R149W	0.000	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
KRI1	65095	genome.wustl.edu	37	19	10671742	10671742	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	19	10671742	10671742	G	A	SNP	KRI1	NM_023008.3	human	genbank	58_37c	-1	validated	silent	c.618	p.A206	0.016	NULL	HMMPfam_Kri1	-	no_errors
LUZP4	51213	genome.wustl.edu	37	X	114524334	114524334	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	X	114524334	114524334	G	A	SNP	LUZP4	NM_016383.3	human	genbank	58_37c	+1	validated	silent	c.9	p.S3	0.031	NULL	NULL	-	no_errors
MAGI1	9223	genome.wustl.edu	37	3	65342480	65342480	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	3	65342480	65342480	C	T	SNP	MAGI1	NM_001033057.1	human	genbank	58_37c	-1	reviewed	missense	c.3962	p.R1321Q	0.000	NULL	HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
METAP2	10988	genome.wustl.edu	37	12	95905673	95905673	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	12	95905673	95905673	A	T	SNP	METAP2	NM_006838.3	human	genbank	58_37c	+1	reviewed	nonsense	c.967	p.K323*	1.000	HMMPfam_Peptidase_M24,superfamily_Creatinase/aminopeptidase	"HMMPfam_Peptidase_M24,superfamily_Creatinase/aminopeptidase,PatternScan_MAP_2,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
MFHAS1	9258	genome.wustl.edu	37	8	8748257	8748257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	8	8748257	8748257	G	A	SNP	MFHAS1	NM_004225.2	human	genbank	58_37c	-1	reviewed	missense	c.2312	p.A771V	0.004	NULL	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,HMMSmart_SM00365,superfamily_L domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Polo-box domain	-	no_errors
MYO18B	84700	genome.wustl.edu	37	22	26422713	26422713	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	22	26422713	26422713	G	A	SNP	MYO18B	NM_032608.5	human	genbank	58_37c	+1	reviewed	missense	c.6773	p.R2258Q	1.000	NULL	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NOX4	50507	genome.wustl.edu	37	11	89106652	89106652	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	11	89106652	89106652	A	G	SNP	NOX4	NM_016931.3	human	genbank	58_37c	-1	reviewed	silent	c.1083	p.T361	1.000	HMMPfam_FAD_binding_8,superfamily_Riboflavin synthase domain-like	HMMPfam_FAD_binding_8,HMMPfam_NAD_binding_6,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain	-	no_errors
NRXN3	9369	genome.wustl.edu	37	14	79933659	79933659	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	14	79933659	79933659	G	A	SNP	NRXN3	NM_004796.4	human	genbank	58_37c	+1	reviewed	missense	c.2239	p.V747M	1.000	HMMSmart_LamG,superfamily_ConA_like_lec_gl	PatternScan_ASX_HYDROXYL,HMMSmart_LamG,HMMSmart_4.1m,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	-	no_errors
OR4K2	390431	genome.wustl.edu	37	14	20345239	20345239	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	14	20345239	20345239	G	T	SNP	OR4K2	NM_001005501.1	human	genbank	58_37c	+1	provisional	silent	c.813	p.L271	0.586	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PSIP1	11168	genome.wustl.edu	37	9	15469016	15469016	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	9	15469016	15469016	G	A	SNP	PSIP1	NM_001128217.1	human	genbank	58_37c	-1	validated	missense	c.1145	p.S382L	1.000	NULL	HMMPfam_PWWP,HMMSmart_SM00293,superfamily_Tudor/PWWP/MBT	-	no_errors
PTCHD3	374308	genome.wustl.edu	37	10	27702625	27702625	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	10	27702625	27702625	C	T	SNP	PTCHD3	NM_001034842.3	human	genbank	58_37c	-1	validated	silent	c.555	p.V185	0.389	HMMPfam_Patched	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
RASA4P	401331	genome.wustl.edu	37	7	44068881	44068881	+	RNA	SNP	A	A	G	rs185282054	by1000genomes	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	7	44068881	44068881	A	G	SNP	RASA4P	NR_024116.2	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.580	-	-	-	pseudogene
SPHKAP	80309	genome.wustl.edu	37	2	228883499	228883499	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	228883499	228883499	C	A	SNP	SPHKAP	NM_001142644.1	human	genbank	58_37c	-1	validated	missense	c.2071	p.D691Y	0.000	NULL	HMMPfam_AKAP_110	-	no_errors
SPRED1	161742	genome.wustl.edu	37	15	38591723	38591723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	15	38591723	38591723	G	A	SNP	SPRED1	NM_152594.2	human	genbank	58_37c	+1	reviewed	missense	c.182	p.R61H	1.000	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	HMMPfam_WH1,HMMSmart_SM00461,HMMPfam_Sprouty,superfamily_PH domain-like	-	no_errors
TBC1D4	9882	genome.wustl.edu	37	13	75936260	75936260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	13	75936260	75936260	C	T	SNP	TBC1D4	NM_014832.2	human	genbank	58_37c	-1	validated	missense	c.982	p.E328K	0.990	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like	-	no_errors
TMC5	79838	genome.wustl.edu	37	16	19481012	19481012	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	16	19481012	19481012	G	A	SNP	TMC5	NM_001105248.1	human	genbank	58_37c	+1	validated	silent	c.1647	p.K549	0.915	NULL	HMMPfam_TMC	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578538	7578538	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	17	7578538	7578538	T	-	DEL	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.392	p.N131fs	1.000	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRAK2	66008	genome.wustl.edu	37	2	202245617	202245617	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	202245617	202245617	G	C	SNP	TRAK2	NM_015049.2	human	genbank	58_37c	-1	validated	silent	c.2394	p.L798	0.931	NULL	HMMPfam_HAP1_N	-	no_errors
WDR33	55339	genome.wustl.edu	37	2	128463985	128463985	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	2	128463985	128463985	C	T	SNP	WDR33	NM_018383.3	human	genbank	58_37c	-1	reviewed	missense	c.3923	p.R1308Q	1.000	NULL	HMMSmart_WD40,HMMPfam_Collagen,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
XRRA1	143570	genome.wustl.edu	37	11	74570222	74570222	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	11	74570222	74570222	A	C	SNP	XRRA1	NM_182969.1	human	genbank	58_37c	-1	validated	missense	c.1127	p.L376R	1.000	HMMSmart_SM00369,superfamily_L domain-like	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like	-	no_errors
ZKSCAN4	387032	genome.wustl.edu	37	6	28214862	28214862	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	da70101d-10c2-47ab-bce1-7757dcbb08a2	b5de4094-f708-472f-aeb6-a7ed61223af5	6	28214862	28214862	C	T	SNP	ZKSCAN4	NM_019110.3	human	genbank	58_37c	-1	provisional	silent	c.663	p.L221	0.988	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_SCAN,HMMSmart_SCAN,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
