Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ALDH3B1	221	genome.wustl.edu	37	11	67795381	67795381	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	11	67795381	67795381	A	C	SNP	ALDH3B1	NM_000694.2	human	genbank	58_37c	+1	reviewed	missense	c.1379	p.Q460P	0.000	NULL	superfamily_ALDH-like	-	pseudogene:bad_bp_length_for_coding_region
ATP1A4	480	genome.wustl.edu	37	1	160147410	160147410	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	1	160147410	160147410	G	C	SNP	ATP1A4	NM_144699.3	human	genbank	58_37c	+1	reviewed	missense	c.2692	p.D898H	0.116	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_Hydrolase,HMMPfam_Cation_ATPase_C,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
CCDC102A	92922	genome.wustl.edu	37	16	57550287	57550287	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	16	57550287	57550287	A	C	SNP	CCDC102A	NM_033212.3	human	genbank	58_37c	-1	validated	missense	c.1337	p.V446G	1.000	NULL	NULL	-	no_errors
CFHR2	3080	genome.wustl.edu	37	1	196918689	196918689	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	1	196918689	196918689	T	C	SNP	CFHR2	NM_005666.2	human	genbank	58_37c	+1	validated	missense	c.163	p.C55R	0.032	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	-	no_errors
CLIP1	6249	genome.wustl.edu	37	12	122825972	122825972	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	12	122825972	122825972	G	A	SNP	CLIP1	NM_002956.2	human	genbank	58_37c	-1	validated	silent	c.1746	p.T582	0.000	NULL	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Cap-Gly domain	-	no_errors
CNTN2	6900	genome.wustl.edu	37	1	205028352	205028352	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	1	205028352	205028352	A	C	SNP	CNTN2	NM_005076.2	human	genbank	58_37c	+1	reviewed	missense	c.628	p.T210P	1.000	HMMSmart_IG,superfamily_SSF48726	HMMSmart_IGc2,HMMSmart_IG,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMPfam_I-set,HMMPfam_ig,superfamily_SSF48726	-	no_errors
CORO2A	7464	genome.wustl.edu	37	9	100887118	100887118	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	9	100887118	100887118	C	T	SNP	CORO2A	NM_003389.3	human	genbank	58_37c	-1	reviewed	missense	c.1516	p.V506I	1.000	NULL	HMMSmart_SM00320,PatternScan_GLNA_1,superfamily_WD40 repeat-like,HMMPfam_DUF1899,HMMPfam_DUF1900,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
CRIPAK	285464	genome.wustl.edu	37	4	1388441	1388441	+	Missense_Mutation	SNP	A	A	G	rs144787346	byFrequency	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	4	1388441	1388441	A	G	SNP	CRIPAK	NM_175918.3	human	genbank	58_37c	+1	validated	missense	c.142	p.M48V	0.008	HMMSmart_PostSET	HMMSmart_PostSET	-	no_errors
EML5	161436	genome.wustl.edu	37	14	89094085	89094085	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	14	89094085	89094085	C	-	DEL	EML5	NM_183387.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.4436	p.G1479fs	1.000	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	HMMSmart_SM00320,HMMPfam_HELP,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ENSG00000238748	0	genome.wustl.edu	37	12	100795963	100795963	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	12	100795963	100795963	G	A	SNP	ENSG00000238748	ENST00000459038	human	ensembl	58_37c	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors
ENSG00000244978	0	genome.wustl.edu	37	22	24085966	24085966	+	RNA	SNP	G	G	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	22	24085966	24085966	G	T	SNP	ZNF70	NM_021916.2	human	genbank	58_37c	-1	provisional	3_prime_untranslated_region	c.*21	NULL	0.000	-	-	-	no_errors
FAM86B1	85002	genome.wustl.edu	37	8	12044059	12044059	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	8	12044059	12044059	G	A	SNP	FAM86B1	NM_001083537.1	human	genbank	58_37c	-1	predicted	missense	c.442	p.R148W	0.195	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
IL1RL2	8808	genome.wustl.edu	37	2	102818091	102818091	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	2	102818091	102818091	G	A	SNP	IL1RL2	NM_003854.2	human	genbank	58_37c	+1	reviewed	missense	c.565	p.D189N	0.340	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR,HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	-	no_errors
IL28B	282617	genome.wustl.edu	37	19	39735556	39735556	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	19	39735556	39735556	C	T	SNP	IL28B	NM_172139.2	human	genbank	58_37c	-1	reviewed	missense	c.52	p.V18M	0.001	NULL	NULL	-	no_errors
KIAA0664	23277	genome.wustl.edu	37	17	2598235	2598235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	17	2598235	2598235	G	A	SNP	KIAA0664	NM_015229.3	human	genbank	58_37c	-1	validated	missense	c.2651	p.T884I	0.993	NULL	superfamily_SSF103107,superfamily_SSF48452	-	no_errors
KIFC1	3833	genome.wustl.edu	37	6	33371608	33371608	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	6	33371608	33371608	G	T	SNP	KIFC1	NM_002263.3	human	genbank	58_37c	+1	validated	missense	c.458	p.C153F	0.158	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
LAMB2	3913	genome.wustl.edu	37	3	49167413	49167413	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	3	49167413	49167413	G	A	SNP	LAMB2	NM_002292.3	human	genbank	58_37c	-1	reviewed	missense	c.1264	p.R422C	0.987	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_SSF57196	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LOC100287896	0	genome.wustl.edu	37	11	74209012	74209012	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	11	74209012	74209012	G	A	SNP	LOC100287896	XM_002343118.1	human	genbank	58_37c	+1	model	missense	c.1062	p.M354I	0.438	NULL	HMMSmart_SM00674,HMMPfam_CENP-B_N,superfamily_Homeodomain-like,HMMPfam_CenpB-DNA-bind	-	no_errors
LOC644189	644189	genome.wustl.edu	37	19	36912804	36912804	+	RNA	SNP	G	G	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	19	36912804	36912804	G	C	SNP	LOC644189	XR_016949.3	human	genbank	58_37c	+1	model	rna	NULL	NULL	0.995	-	-	-	no_errors
LRP1B	53353	genome.wustl.edu	37	2	141598583	141598583	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	2	141598583	141598583	G	A	SNP	LRP1B	NM_018557.2	human	genbank	58_37c	-1	validated	missense	c.5018	p.T1673M	1.000	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMPfam_NHL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
MYF6	4618	genome.wustl.edu	37	12	81101884	81101884	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	12	81101884	81101884	C	T	SNP	MYF6	NM_002469.2	human	genbank	58_37c	+1	reviewed	missense	c.386	p.P129L	1.000	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain	HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_Basic,HMMSmart_SM00520,superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
PCDHB14	56122	genome.wustl.edu	37	5	140605357	140605357	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	5	140605357	140605357	G	C	SNP	PCDHB14	NM_018934.2	human	genbank	58_37c	+1	reviewed	silent	c.2280	p.G760	0.002	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PCDHGB1	56104	genome.wustl.edu	37	5	140731438	140731438	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	5	140731438	140731438	G	A	SNP	PCDHGB1	NM_018922.2	human	genbank	58_37c	+1	reviewed	silent	c.1611	p.A537	0.700	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PIK3R1	5295	genome.wustl.edu	37	5	67591130	67591150	+	In_Frame_Del	DEL	AAGACGAGAGACCAATACTTG	AAGACGAGAGACCAATACTTG	-	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	AAGACGAGAGACCAATACTTG	AAGACGAGAGACCAATACTTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	5	67591130	67591150	AAGACGAGAGACCAATACTTG	-	DEL	PIK3R1	NM_181523.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1723_1743	p.KTRDQYL575in_frame_del	1.000:1.000:1.000:1.000:0.999:0.016:0.975:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.989:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,superfamily_GTPase activation domain GAP,superfamily_SH2 domain	-	no_errors
POMT2	29954	genome.wustl.edu	37	14	77757676	77757676	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	14	77757676	77757676	C	T	SNP	POMT2	NM_013382.5	human	genbank	58_37c	-1	reviewed	silent	c.1164	p.K388	1.000	HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472	PatternScan_SERPIN,HMMPfam_PMT,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472	-	no_errors
PSMC6	5706	genome.wustl.edu	37	14	53173897	53173897	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	14	53173897	53173897	T	C	SNP	PSMC6	NM_002806.3	human	genbank	58_37c	+1	reviewed	missense	c.2	p.M1T	1.000	NULL	HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RAD54B	25788	genome.wustl.edu	37	8	95392443	95392443	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	8	95392443	95392443	C	A	SNP	RAD54B	NM_012415.2	human	genbank	58_37c	-1	reviewed	missense	c.2177	p.G726V	1.000	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
RBAK	57786	genome.wustl.edu	37	7	5103484	5103484	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	7	5103484	5103484	A	G	SNP	RBAK	NM_021163.3	human	genbank	58_37c	+1	reviewed	missense	c.397	p.I133V	0.000	NULL	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
RGS9	8787	genome.wustl.edu	37	17	63221255	63221255	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	17	63221255	63221255	C	T	SNP	RGS9	NM_003835.3	human	genbank	58_37c	+1	reviewed	missense	c.1543	p.R515W	0.588	NULL	"HMMPfam_RGS,HMMSmart_SM00315,HMMPfam_DEP,HMMSmart_SM00049,HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain,superfamily_Regulator of G-protein signaling RGS,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
RIMS2	9699	genome.wustl.edu	37	8	104924348	104924348	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	8	104924348	104924348	G	A	SNP	RIMS2	NM_001100117.1	human	genbank	58_37c	+1	validated	missense	c.1760	p.R587H	1.000	superfamily_PDZ domain-like	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_RPH3A_effector,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_FYVE/PHD zinc finger	-	no_errors
RYR1	6261	genome.wustl.edu	37	19	38973696	38973696	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	19	38973696	38973696	C	T	SNP	RYR1	NM_000540.2	human	genbank	58_37c	+1	reviewed	silent	c.4650	p.A1550	0.064	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
RYR2	6262	genome.wustl.edu	37	1	237881772	237881772	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	1	237881772	237881772	A	G	SNP	RYR2	NM_001035.2	human	genbank	58_37c	+1	reviewed	missense	c.10505	p.E3502G	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
STK32C	282974	genome.wustl.edu	37	10	134036380	134036380	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	10	134036380	134036380	C	T	SNP	STK32C	NM_173575.2	human	genbank	58_37c	-1	reviewed	silent	c.1104	p.P368	0.005	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
USP42	84132	genome.wustl.edu	37	7	6155014	6155014	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	7	6155014	6155014	T	G	SNP	USP42	NM_032172.2	human	genbank	58_37c	+1	validated	missense	c.302	p.L101R	1.000	NULL	HMMPfam_UCH,PatternScan_IG_MHC,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_SSF54001	-	no_errors
USP49	25862	genome.wustl.edu	37	6	41773690	41773690	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	6	41773690	41773690	G	A	SNP	USP49	NM_018561.3	human	genbank	58_37c	-1	provisional	silent	c.1032	p.L344	1.000	HMMPfam_UCH,superfamily_Cysteine proteinases	HMMPfam_UCH,HMMPfam_zf-UBP,HMMSmart_SM00290,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
ZHX3	23051	genome.wustl.edu	37	20	39832443	39832443	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14Q-01A-11D-A12B-09	TCGA-E2-A14Q-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	ee51cf6d-351f-48f8-ab93-639c27c50e9f	323a490c-8dd7-4715-b083-f238c565b60d	20	39832443	39832443	G	A	SNP	ZHX3	NM_015035.3	human	genbank	58_37c	-1	reviewed	missense	c.1114	p.R372W	1.000	superfamily_Homeodomain_like	HMMPfam_Homeobox,HMMSmart_HOX,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1	-	no_errors
