Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABHD13	0	genome.wustl.edu	37	13	108882272	108882272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	13	108882272	108882272	C	T	SNP	ABHD13	NM_032859.2	human	genbank	58_37c	+1	validated	missense	c.706	p.R236C	1.000	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases	-	no_errors
AKT1	207	genome.wustl.edu	37	14	105246551	105246551	+	Missense_Mutation	SNP	C	C	T	rs121434592	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	14	105246551	105246551	C	T	SNP	AKT1	NM_001014431.1	human	genbank	58_37c	-1	reviewed	missense	c.49	p.E17K	1.000	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	HMMSmart_SM00133,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like	-	no_errors
ASXL2	0	genome.wustl.edu	37	2	25982469	25982469	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	2	25982469	25982469	G	A	SNP	ASXL2	NM_018263.4	human	genbank	58_37c	-1	validated	missense	c.821	p.P274L	1.000	NULL	NULL	-	no_errors
BRCA1	0	genome.wustl.edu	37	17	41244468	41244468	+	Missense_Mutation	SNP	C	C	A	rs80357386	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	17	41244468	41244468	C	A	SNP	BRCA1	NM_007294.3	human	genbank	58_37c	-1	reviewed	missense	c.3080	p.S1027I	0.912	NULL	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
C10orf92	0	genome.wustl.edu	37	10	134659572	134659573	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	10	134659572	134659573	-	G	INS	C10orf92	ENST00000368586	human	ensembl	58_37c	-1	known	frame_shift_ins	c.6427_6426	p.A2142fs	0.000:0.000	NULL	superfamily_TPR-like	-	no_errors
C14orf38	0	genome.wustl.edu	37	14	60011911	60011911	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	14	60011911	60011911	G	T	SNP	C14orf38	ENST00000281581	human	ensembl	58_37c	-1	known	missense	c.1142	p.A381D	0.000	NULL	NULL	-	no_errors
C3orf75	0	genome.wustl.edu	37	3	47545880	47545880	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	3	47545880	47545880	T	C	SNP	C3orf75	NM_001031703.2	human	genbank	58_37c	-1	validated	missense	c.263	p.K88R	1.000	HMMPfam_DUF2348	HMMPfam_DUF2348	-	no_errors
CBFB	0	genome.wustl.edu	37	16	67070543	67070543	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	16	67070543	67070543	C	G	SNP	CBFB	NM_022845.2	human	genbank	58_37c	+1	reviewed	missense	c.167	p.A56G	1.000	HMMPfam_CBF_beta,superfamily_CBF_beta	HMMPfam_CBF_beta,superfamily_CBF_beta	-	no_errors
CBX2	0	genome.wustl.edu	37	17	77755934	77755934	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	17	77755934	77755934	G	A	SNP	CBX2	NM_032647.3	human	genbank	58_37c	+1	reviewed	missense	c.622	p.A208T	0.001	NULL	HMMPfam_Chromo,HMMSmart_CHROMO,PatternScan_CHROMO_1,superfamily_Chromodomain-like,HMMSmart_AT_hook	-	no_errors
CD1C	0	genome.wustl.edu	37	1	158261046	158261046	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	1	158261046	158261046	T	C	SNP	CD1C	NM_001765.2	human	genbank	58_37c	+1	reviewed	missense	c.184	p.S62P	0.000	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog	HMMPfam_MHC_I,HMMPfam_C1-set,HMMSmart_IGc1,superfamily_MHC_I/II-like_Ag-recog,superfamily_SSF48726	-	no_errors
COL5A3	0	genome.wustl.edu	37	19	10084883	10084883	+	Silent	SNP	C	C	T	rs139846355	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	19	10084883	10084883	C	T	SNP	COL5A3	NM_015719.3	human	genbank	58_37c	-1	reviewed	silent	c.3468	p.P1156	0.822	HMMPfam_Collagen	HMMPfam_COLFI,HMMSmart_SM00038,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2	-	no_errors
CTCF	0	genome.wustl.edu	37	16	67644817	67644830	+	Frame_Shift_Del	DEL	CGCCGGGAAGGGGG	CGCCGGGAAGGGGG	-	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	CGCCGGGAAGGGGG	CGCCGGGAAGGGGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	16	67644817	67644830	CGCCGGGAAGGGGG	-	DEL	CTCF	NM_006565.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.82_95	p.R28fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.935:1.000:1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
CXorf36	0	genome.wustl.edu	37	X	45011033	45011033	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	X	45011033	45011033	C	T	SNP	CXorf36	NM_176819.3	human	genbank	58_37c	-1	validated	missense	c.1166	p.C389Y	0.966	NULL	NULL	-	no_errors
DSPP	0	genome.wustl.edu	37	4	88534248	88534248	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	4	88534248	88534248	T	A	SNP	DSPP	NM_014208.3	human	genbank	58_37c	+1	reviewed	missense	c.910	p.Y304N	0.769	NULL	NULL	-	no_errors
E2F7	0	genome.wustl.edu	37	12	77439990	77439990	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	12	77439990	77439990	C	T	SNP	E2F7	NM_203394.2	human	genbank	58_37c	-1	validated	silent	c.657	p.L219	0.120	NULL	"HMMPfam_E2F_TDP,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	2349	2349	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	MT	2349	2349	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000214069	0	genome.wustl.edu	37	17	80786261	80786262	+	Frame_Shift_Ins	INS	-	-	ACAC	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	17	80786261	80786262	-	ACAC	INS	ENSG00000214069	ENST00000397438	human	ensembl	58_37c	+1	known	frame_shift_ins	c.320_321	p.A109fs	0.014:0.014	NULL	NULL	-	no_stop_codon
ENSG00000214094	0	genome.wustl.edu	37	17	79390371	79390372	+	Frame_Shift_Del	DEL	GT	GT	-	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	GT	GT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	17	79390371	79390372	GT	-	DEL	ENSG00000214094	ENST00000397526	human	ensembl	58_37c	-1	known	frame_shift_del	c.89_88	p.T30fs	0.001:0.002	NULL	NULL	-	no_stop_codon
ENSG00000229561	0	genome.wustl.edu	37	16	83984350	83984353	+	Frame_Shift_Del	DEL	ACGT	ACGT	-	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	ACGT	ACGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	16	83984350	83984353	ACGT	-	DEL	ENSG00000229561	ENST00000435801	human	ensembl	58_37c	-1	known	frame_shift_del	c.220_217	p.T73fs	0.018:0.016:0.013:0.013	PatternScan_TNFR_NGFR_1	PatternScan_VWFC_1,PatternScan_TNFR_NGFR_1	-	no_stop_codon
GATA3	0	genome.wustl.edu	37	10	8115705	8115706	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	10	8115705	8115706	AA	-	DEL	GATA3	NM_001002295.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1054_1055	p.N352fs	1.000:1.000	HMMPfam_GATA,HMMSmart_SM00401,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
GRM8	0	genome.wustl.edu	37	7	126173165	126173165	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	7	126173165	126173165	G	T	SNP	GRM8	NM_000845.2	human	genbank	58_37c	-1	reviewed	silent	c.2271	p.I757	1.000	HMMPfam_7tm_3	HMMPfam_ANF_receptor,HMMPfam_NCD3G,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,superfamily_Periplasmic binding protein-like I	-	no_errors
IFNA21	0	genome.wustl.edu	37	9	21166507	21166507	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	9	21166507	21166507	C	A	SNP	IFNA21	NM_002175.2	human	genbank	58_37c	-1	validated	missense	c.105	p.R35S	0.000	HMMPfam_Interferon,superfamily_4_helix_cytokine	HMMPfam_Interferon,HMMSmart_IFabd,PatternScan_INTERFERON_A_B_D,superfamily_4_helix_cytokine	-	no_errors
KRTAP5-5	0	genome.wustl.edu	37	11	1651157	1651157	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	11	1651157	1651157	A	G	SNP	KRTAP5-5	NM_001001480.2	human	genbank	58_37c	+1	validated	silent	c.87	p.G29	0.409	NULL	PatternScan_2FE2S_FER_1,PatternScan_MOLYBDOPTERIN_PROK_1	-	no_errors
LOC100130746	0	genome.wustl.edu	37	5	24170498	24170500	+	RNA	DEL	ATG	ATG	-	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	ATG	ATG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	5	24170498	24170500	ATG	-	DEL	LOC100130746	XR_038810.2	human	genbank	58_37c	+1	model	rna	NULL	NULL	1.000:1.000:0.998	-	-	-	pseudogene
LOC100132329	0	genome.wustl.edu	37	1	142849234	142849234	+	Silent	SNP	G	G	A	rs3877237	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	1	142849234	142849234	G	A	SNP	LOC100132329	XM_001721549.1	human	genbank	58_37c	-1	model	silent	c.219	p.P73	0.686	NULL	NULL	-	no_errors
MLL3	0	genome.wustl.edu	37	7	151932951	151932952	+	Frame_Shift_Ins	INS	-	-	GG	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	7	151932951	151932952	-	GG	INS	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.2720_2719	p.R907fs	1.000:0.998	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MLL3	0	genome.wustl.edu	37	7	152012230	152012230	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	7	152012230	152012230	G	A	SNP	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	nonsense	c.583	p.Q195*	1.000	NULL	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
SEMA3G	0	genome.wustl.edu	37	3	52469820	52469820	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	3	52469820	52469820	G	A	SNP	SEMA3G	NM_020163.1	human	genbank	58_37c	-1	provisional	silent	c.2148	p.F716	0.001	NULL	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema,HMMSmart_IG,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_SSF48726	-	no_errors
SLC1A6	0	genome.wustl.edu	37	19	15079170	15079170	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	19	15079170	15079170	G	A	SNP	SLC1A6	NM_005071.1	human	genbank	58_37c	-1	provisional	missense	c.493	p.R165W	0.761	HMMPfam_SDF	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_1,PatternScan_NA_DICARBOXYL_SYMP_2	-	no_errors
SLC25A13	0	genome.wustl.edu	37	7	95761189	95761189	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	7	95761189	95761189	G	A	SNP	SLC25A13	NM_014251.2	human	genbank	58_37c	-1	reviewed	missense	c.1457	p.A486V	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMSmart_EFh,HMMPfam_Mito_carr,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
SLC40A1	0	genome.wustl.edu	37	2	190428522	190428522	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	2	190428522	190428522	G	T	SNP	SLC40A1	NM_014585.5	human	genbank	58_37c	-1	reviewed	missense	c.1190	p.P397H	1.000	superfamily_MFS general substrate transporter	HMMPfam_FPN1,superfamily_MFS general substrate transporter	-	no_errors
STX6	0	genome.wustl.edu	37	1	180974506	180974506	+	Silent	SNP	G	G	A	rs146443317	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	1	180974506	180974506	G	A	SNP	STX6	NM_005819.4	human	genbank	58_37c	-1	validated	silent	c.129	p.I43	1.000	superfamily_t-snare proteins,HMMPfam_Syntaxin-6_N	HMMPfam_SNARE,HMMSmart_SM00397,PatternScan_SYNTAXIN,superfamily_t-snare proteins,HMMPfam_Syntaxin-6_N	-	no_errors
SYNCRIP	0	genome.wustl.edu	37	6	86332254	86332254	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	6	86332254	86332254	T	C	SNP	SYNCRIP	NM_006372.4	human	genbank	58_37c	-1	validated	silent	c.954	p.G318	1.000	HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
SYT9	0	genome.wustl.edu	37	11	7439351	7439351	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A1L9-01A-11D-A13L-09	TCGA-E2-A1L9-10A-01D-A188-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	a50cd2b2-913d-41bf-94ad-45464547b348	893c62e3-94ee-49f2-a0e1-64eed978c722	11	7439351	7439351	C	A	SNP	SYT9	NM_175733.3	human	genbank	58_37c	+1	validated	missense	c.1329	p.D443E	0.998	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB	-	no_errors
