Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-BK-A139-01A-11D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C01_1347314	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C01_1347314.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
TCGA-BK-A0CA-01A-21D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B10_1347306	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B10_1347306.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
TCGA-BK-A0CA-10A-02D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B12_1347408	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B12_1347408.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
TCGA-BK-A26L-01A-11D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_D02_1347454	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_D02_1347454.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.143.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
TCGA-BK-A139-10A-01D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C03_1347492	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C03_1347492.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.92.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
TCGA-BK-A26L-10A-01D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B09_1347386	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_B09_1347386.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.143.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
TCGA-BK-A0CC-01A-21D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C07_1347346	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C07_1347346.hg19.seg.txt	broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.49.2005.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg_2013111400	UCEC-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_UCEC-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg.Level_3.2013111400.0.0	yes
