Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Algorithm
HNRNPF	3185	hgsc.bcm.edu	37	10	43882457	43882457	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	HNRNPF-22	NM_001098208	exon3	c.C876G	p.H292Q	CCTCATGTGGACA	.	83.0	17.0	127.0	0.0	.	Atlas-SNP
SFXN4	119559	hgsc.bcm.edu	37	10	120923681	120923681	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SFXN4-91	NM_213649	exon2	c.A139T	p.T47S	ATTCTGTCCATTG	.	358.0	108.0	224.0	0.0	.	Atlas-SNP
PRDX3	10935	hgsc.bcm.edu	37	10	120931958	120931958	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	PRDX3-90	NM_014098	exon5	c.G433C	p.D145H	TTAAGTCTGACAA	.	198.0	64.0	213.0	0.0	.	Atlas-SNP
CCDC73	493860	hgsc.bcm.edu	37	11	32635661	32635661	+	Silent	SNP	T	T	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	CCDC73-91	NM_001008391	exon16	c.C2203C	p.L735L	CCAACATAGACAT	.	51.0	17.0	40.0	0.0	.	Atlas-SNP
NR1H3	10062	hgsc.bcm.edu	37	11	47282859	47282859	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	NR1H3-228	NM_001251934	exon5	c.C585T	p.A195A	TCATGCCACATCC	.	204.0	128.0	210.0	0.0	.	Atlas-SNP
PAN2	9924	hgsc.bcm.edu	37	12	56712211	56712211	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	PAN2-702	NM_001166279	exon25	c.G3381T	p.K1127N	TTGAATCTTCAGG	.	371.0	59.0	281.0	0.0	.	Atlas-SNP
GAS2L3	283431	hgsc.bcm.edu	37	12	101017613	101017613	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	GAS2L3-227	NM_174942	exon10	c.G1030C	p.E344Q	AGCAAAGAAAAAC	.	154.0	45.0	86.0	0.0	.	Atlas-SNP
WBP4	11193	hgsc.bcm.edu	37	13	41642838	41642838	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	WBP4-289	NM_007187	exon5	c.A404C	p.E135A	CCTCTGAGGGTTA	.	16.0	11.0	69.0	0.0	.	Atlas-SNP
SERPINA1	5265	hgsc.bcm.edu	37	14	94845822	94845822	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SERPINA1-226	NM_001127702	exon5	c.G1044A	p.E348E	GGGTGCCTCCTCT	.	92.0	37.0	131.0	0.0	.	Atlas-SNP
DECR2	26063	hgsc.bcm.edu	37	16	455024	455024	+	Missense_Mutation	SNP	G	G	A	rs201409624		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	DECR2-90	NM_020664	exon2	c.G149A	p.R50Q	TCATGCGGTGAGA	.	105.0	18.0	127.0	0.0	G|0.999;A|0.000	Atlas-SNP
DSG1	1828	hgsc.bcm.edu	37	18	28918353	28918353	+	Silent	SNP	A	A	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	DSG1-519	NM_001942	exon10	c.A1341G	p.K447K	AAATAAAGTTACC	.	273.0	112.0	311.0	1.0	.	Atlas-SNP
MEX3C	51320	hgsc.bcm.edu	37	18	48723211	48723211	+	Silent	SNP	C	C	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	MEX3C-659	NM_016626	exon1	c.G480C	p.G160G	CAGGGACCCGCCC	.	32.0	16.0	21.0	0.0	.	Atlas-SNP
PIK3C3	5289	hgsc.bcm.edu	37	18	39637866	39637867	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	PIK3C3-1312	NM_002647	exon22	c.2283_2284insT	p.D761fs	.	.	47.0	12.0	76.0	0.0	.	Atlas-Indel
C19orf44	84167	hgsc.bcm.edu	37	19	16611629	16611629	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	C19orf44-90	NM_032207	exon2	c.G26A	p.R9H	CCAGCCGTCCCAT	.	164.0	33.0	117.0	0.0	.	Atlas-SNP
SCGB2B2	284402	hgsc.bcm.edu	37	19	35085180	35085180	+	Missense_Mutation	SNP	C	C	T	rs142177025	byfrequency;alternate_allele	TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	.	NM_001025591	exon2	c.G146A	p.R49H	TTGTAACGAGCAA	.	188.0	41.0	218.0	0.0	C|1.000;A|0.000	Atlas-SNP
WDR87	83889	hgsc.bcm.edu	37	19	38375577	38375577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	.	NM_031951	exon6	c.C8617T	p.L2873F	ATTAGAGAGTGGG	.	252.0	48.0	224.0	0.0	.	Atlas-SNP
SULT2B1	6820	hgsc.bcm.edu	37	19	49079309	49079309	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	SULT2B1,arm,malignant_melanoma,+2	SULT2B1-91	NM_004605	exon1	c.C138T	p.D46D	GGACGACGACATC	.	75.0	13.0	78.0	0.0	.	Atlas-SNP
ZNF233	353355	hgsc.bcm.edu	37	19	44778797	44778797	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	ZNF233-92	NM_181756	exon5	c.1983delG	p.S661fs	.	.	106.0	42.0	74.0	0.0	.	Atlas-Indel
CTBS	1486	hgsc.bcm.edu	37	1	85036384	85036384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	CTBS-90	NM_004388	exon2	c.G197A	p.G66E	TTCTGTCCAACAT	.	76.0	11.0	104.0	0.0	.	Atlas-SNP
ATF6	22926	hgsc.bcm.edu	37	1	161761234	161761234	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	ATF6-93	NM_007348	exon5	c.C391G	p.P131A	ATGTCTCCCCTTT	.	59.0	29.0	64.0	0.0	.	Atlas-SNP
SLC35F3	148641	hgsc.bcm.edu	37	1	234444906	234444906	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SLC35F3-92	NM_173508	exon4	c.C668A	p.A223E	CCAAGGCAGCACC	.	110.0	24.0	106.0	0.0	.	Atlas-SNP
SLC24A3	57419	hgsc.bcm.edu	37	20	19665891	19665891	+	Missense_Mutation	SNP	G	G	T	rs140841773		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SLC24A3-91	NM_020689	exon12	c.G1210T	p.V404L	GATGTTGTGGCTG	.	108.0	40.0	187.0	0.0	G|1.000;T|0.000	Atlas-SNP
URB1	9875	hgsc.bcm.edu	37	21	33717002	33717002	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	.	NM_014825	exon24	c.G4134C	p.W1378C	CCTTCTCCAGGCA	.	57.0	19.0	70.0	0.0	.	Atlas-SNP
COL6A2	1292	hgsc.bcm.edu	37	21	47532263	47532263	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	COL6A2-515	NM_001849	exon3	c.C486T	p.D162D	CACCGACGGCCAC	.	72.0	19.0	7.0	0.0	.	Atlas-SNP
MICALL1	85377	hgsc.bcm.edu	37	22	38307969	38307969	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	MICALL1-153	NM_033386	exon2	c.T157A	p.S53T	TTTGATTCGCTTT	.	253.0	65.0	248.0	0.0	.	Atlas-SNP
SCO2	9997	hgsc.bcm.edu	37	22	50962186	50962186	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SCO2-226	NM_001169109	exon2	c.G655T	p.D219Y	TGTAGTCCTGGTC	.	83.0	14.0	253.0	0.0	.	Atlas-SNP
TTN	7273	hgsc.bcm.edu	37	2	179569656	179569656	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	TTN-636	NM_001267550	exon104	c.A29642T	p.K9881M	AATTCCTTTTCGT	.	84.0	29.0	93.0	0.0	.	Atlas-SNP
SP140	11262	hgsc.bcm.edu	37	2	231103027	231103027	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SP140-90	NM_007237	exon3	c.G337A	p.A113T	CTGGAAGCATTGT	.	363.0	87.0	257.0	0.0	.	Atlas-SNP
HADHA	3030	hgsc.bcm.edu	37	2	26418025	26418026	+	In_Frame_Ins	INS	-	-	TGGAAA	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	HADHA-91	NM_000182	exon15	c.1556_1557insTTTCCA	p.K519delinsISK	.	.	155.0	25.0	211.0	0.0	.	Atlas-Indel
ANKAR	150709	hgsc.bcm.edu	37	2	190611186	190611186	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	ANKAR-72	NM_144708	exon23	c.4137delC	p.F1379fs	.	.	291.0	74.0	159.0	0.0	.	Atlas-Indel
MYEOV2	150678	hgsc.bcm.edu	37	2	241075689	241075689	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	MYEOV2-68	NM_138336	exon1	c.77delT	p.V26fs	.	.	87.0	30.0	24.0	0.0	.	Atlas-Indel
ITPR1	3708	hgsc.bcm.edu	37	3	4715039	4715039	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	ITPR1-710	NM_001099952	exon21	c.G2424C	p.W808C	CCTCTGGTCGGAG	.	74.0	30.0	122.0	0.0	.	Atlas-SNP
BRPF1	7862	hgsc.bcm.edu	37	3	9780990	9780990	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	BRPF1-92	NM_004634	exon3	c.G907C	p.E303Q	CACCAGGAGTGCT	.	202.0	65.0	260.0	0.0	.	Atlas-SNP
BRPF1	7862	hgsc.bcm.edu	37	3	9787330	9787330	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	BRPF1-92	NM_004634	exon11	c.G3124C	p.D1042H	AGTGAGGATACCT	.	173.0	50.0	191.0	0.0	.	Atlas-SNP
GOLGA4	2803	hgsc.bcm.edu	37	3	37368506	37368506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	GOLGA4-93	NM_001172713	exon15	c.G5195T	p.R1732I	TACCCAGATCAGC	.	146.0	56.0	80.0	0.0	.	Atlas-SNP
XIRP1	165904	hgsc.bcm.edu	37	3	39227962	39227962	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	XIRP1-158	NM_194293	exon2	c.C2975T	p.P992L	GGGCAAGGGGTGG	.	44.0	19.0	81.0	0.0	.	Atlas-SNP
HRG	3273	hgsc.bcm.edu	37	3	186386808	186386808	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	HRG-91	NM_000412	exon2	c.G268C	p.E90Q	GACTGTGAGCCAC	.	122.0	19.0	169.0	0.0	.	Atlas-SNP
TET2	54790	hgsc.bcm.edu	37	4	106157773	106157773	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	TET2-4618	NM_017628	exon3	c.C2674G	p.Q892E	TCACAACAAGCTT	.	90.0	10.0	92.0	0.0	.	Atlas-SNP
PRMT10	90826	hgsc.bcm.edu	37	4	148605040	148605040	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	PRMT10-91	NM_138364	exon1	c.G99A	p.E33E	ACAGTGCTCTGCG	.	108.0	35.0	161.0	0.0	.	Atlas-SNP
FBXO8	26269	hgsc.bcm.edu	37	4	175184113	175184113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	FBXO8-290	NM_012180	exon2	c.G131A	p.R44H	TGTTTACGATGAT	.	195.0	73.0	311.0	1.0	.	Atlas-SNP
SLC6A19	340024	hgsc.bcm.edu	37	5	1214090	1214090	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	SLC6A19-90	NM_001003841	exon6	c.A797G	p.D266G	AGCCGGACACCTG	.	58.0	14.0	73.0	0.0	.	Atlas-SNP
DNAH5	1767	hgsc.bcm.edu	37	5	13753560	13753560	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	DNAH5-182	NM_001369	exon63	c.G10654T	p.A3552S	TCCGGGCTTTCAT	.	140.0	37.0	78.0	0.0	.	Atlas-SNP
ANKRD55	79722	hgsc.bcm.edu	37	5	55439737	55439737	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	ANKRD55-91	NM_024669	exon7	c.G503A	p.W168X	GCCGCCCAGTGGA	.	108.0	23.0	117.0	0.0	.	Atlas-SNP
NSD1	64324	hgsc.bcm.edu	37	5	176722232	176722233	+	In_Frame_Ins	INS	-	-	CAA	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	NSD1-188	NM_172349	exon24	c.7056_7057insCAA	p.E2352delinsEQ	.	.	240.0	37.0	112.0	0.0	.	Pindel
MDC1	9656	hgsc.bcm.edu	37	6	30670918	30670918	+	Missense_Mutation	SNP	C	C	T	rs148600920	byfrequency	TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	MDC1-273	NM_014641	exon12	c.G5828A	p.R1943Q	ATTCCCCGCCCCA	.	224.0	20.0	234.0	0.0	C|0.999;T|0.001	Atlas-SNP
BAI3	577	hgsc.bcm.edu	37	6	69665933	69665933	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	BAI3-1148	NM_001704	exon7	c.G1213C	p.E405Q	TGGCAAGAGTGGA	.	69.0	16.0	102.0	0.0	.	Atlas-SNP
HTR5A	3361	hgsc.bcm.edu	37	7	154862761	154862761	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	HTR5A-155	NM_024012	exon1	c.151delG	p.V51fs	.	.	66.0	19.0	94.0	0.0	.	Atlas-Indel
WDR44	54521	hgsc.bcm.edu	37	X	117570692	117570692	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5J7-01A-11D-A29I-10	TCGA-OR-A5J7-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	00b8b899-6191-4169-91bd-a507c326e44d	70d268da-65d7-4e91-a743-63c901185bfd	.	WDR44-133	NM_001184966	exon13	c.G1804C	p.D602H	TCAATGGATAAAA	.	157.0	70.0	159.0	0.0	.	Atlas-SNP
