Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Algorithm
MUC2	4583	hgsc.bcm.edu	37	11	1093255	1093255	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	MUC2-90	NM_002457	exon30	c.G5074A	p.G1692S	CCCACCGGCACAC	.	75.0	5.0	97.0	0.0	.	Atlas-SNP
CPNE6	9362	hgsc.bcm.edu	37	14	24546115	24546115	+	Missense_Mutation	SNP	G	G	A	rs201909603		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	CPNE6-93	NM_006032	exon14	c.G1193A	p.R398H	CCTACCGTCGTTG	.	98.0	8.0	69.0	0.0	G|0.999;A|0.001	Atlas-SNP
KCTD19	146212	hgsc.bcm.edu	37	16	67335694	67335694	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	KCTD19-69	NM_001100915	exon5	c.G775T	p.G259C	ACATACCCATGTT	.	118.0	45.0	140.0	0.0	.	Atlas-SNP
KDM6B	23135	hgsc.bcm.edu	37	17	7750176	7750176	+	Silent	SNP	T	T	C	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	KDM6B-205	NM_001080424	exon9	c.T751C	p.L251L	CCACCATTACCAC	.	10.0	4.0	12.0	0.0	.	Atlas-SNP
KDM6B	23135	hgsc.bcm.edu	37	17	7750177	7750177	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	KDM6B-205	NM_001080424	exon9	c.T752C	p.L251S	CACCATTACCACC	.	10.0	4.0	12.0	0.0	.	Atlas-SNP
TP53	7157	hgsc.bcm.edu	37	17	7574023	7574023	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	TP53,mouth,carcinoma,-1	TP53-70225	NM_001126118	exon9	c.888delT	p.R296fs	.	.	102.0	69.0	157.0	0.0	.	Atlas-Indel
PRKAR1A	5573	hgsc.bcm.edu	37	17	66511671	66511695	+	Frame_Shift_Del	DEL	AGAGACCCATGGCATTCCTCAGGGA	AGAGACCCATGGCATTCCTCAGGGA	-	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	AGAGACCCATGGCATTCCTCAGGGA	AGAGACCCATGGCATTCCTCAGGGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	PRKAR1A-1141	NM_212471	exon2	c.130_154del	p.44_52del	.	.	39.0	11.0	92.0	0.0	.	Atlas-Indel
CYP24A1	1591	hgsc.bcm.edu	37	20	52788140	52788140	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	CYP24A1-228	NM_000782	exon3	c.G519A	p.M173I	CAGCTTCATCACT	.	52.0	4.0	82.0	0.0	.	Atlas-SNP
CNTNAP5	129684	hgsc.bcm.edu	37	2	125521361	125521361	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	CNTNAP5-524	NM_130773	exon15	c.C2344G	p.R782G	CCCTTGCGTTGCT	.	82.0	11.0	85.0	0.0	.	Atlas-SNP
CRIPAK	285464	hgsc.bcm.edu	37	4	1388867	1388867	+	Missense_Mutation	SNP	A	A	C	rs76058011	byfrequency	TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	CRIPAK-90	NM_175918	exon1	c.A568C	p.I190L	CGCCTGATCACAC	.	106.0	15.0	29.0	0.0	A|0.994;C|0.006	Atlas-SNP
RBM46	166863	hgsc.bcm.edu	37	4	155720332	155720332	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	RBM46-69	NM_144979	exon4	c.C1018T	p.H340Y	GAGAGCCACCCAA	.	232.0	14.0	130.0	0.0	.	Atlas-SNP
FSTL5	56884	hgsc.bcm.edu	37	4	162380371	162380371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	FSTL5-158	NM_020116	exon14	c.C1709T	p.T570I	TGTAGTGTTGGTG	.	119.0	27.0	88.0	0.0	.	Atlas-SNP
FAM46A	55603	hgsc.bcm.edu	37	6	82461742	82461742	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	FAM46A-90	NM_017633	exon2	c.C117T	p.G39G	GTCGCCGCCGCCG	.	120.0	9.0	36.0	0.0	.	Atlas-SNP
WDR27	253769	hgsc.bcm.edu	37	6	170013695	170013695	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	WDR27-69	NM_001202550	exon19	c.A1900G	p.I634V	CGCCAATGGCCGT	.	181.0	64.0	148.0	0.0	.	Atlas-SNP
SSPO	23145	hgsc.bcm.edu	37	7	149489784	149489784	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JL-01A-11D-A29I-10	TCGA-OR-A5JL-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	8f0c115d-1ae8-4660-8454-e09ef9150f48	11736376-4bb5-4a2d-b14a-f01a651e41eb	.	.	NM_198455	exon38	c.G5840T	p.R1947L	GAGGTCGCCAGTG	.	71.0	5.0	30.0	0.0	.	Atlas-SNP
