Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Algorithm
METTL10	399818	hgsc.bcm.edu	37	10	126480361	126480361	+	Silent	SNP	C	C	G	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	METTL10-22	NM_212554	exon1	c.G42C	p.A14A	CCGCGCCGCCACC	.	115.0	30.0	6.0	0.0	.	Atlas-SNP
FOXN4	121643	hgsc.bcm.edu	37	12	109719559	109719559	+	Missense_Mutation	SNP	C	C	T	rs61741949	byfrequency	TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	FOXN4-227	NM_213596	exon9	c.G947A	p.R316H	CCGGGGCGCCGGC	.	35.0	13.0	7.0	0.0	C|0.994;T|0.006	Atlas-SNP
DNAH10	196385	hgsc.bcm.edu	37	12	124345570	124345570	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	DNAH10-95	NM_207437	exon38	c.C6407T	p.T2136M	GGCTGACGACAAA	.	124.0	8.0	105.0	0.0	.	Atlas-SNP
ALDH6A1	4329	hgsc.bcm.edu	37	14	74534125	74534125	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	ALDH6A1-90	NM_005589	exon8	c.C1000A	p.P334T	GCTCTGGCAGCCA	.	69.0	4.0	91.0	0.0	.	Atlas-SNP
DOT1L	84444	hgsc.bcm.edu	37	19	2220170	2220170	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	DOT1L-132	NM_032482	exon23	c.G2755T	p.G919C	CAGATTGGTGCTA	.	80.0	4.0	102.0	0.0	.	Atlas-SNP
PLIN5	440503	hgsc.bcm.edu	37	19	4531658	4531658	+	Silent	SNP	G	G	A	rs138772557	by1000genomes	TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	PLIN5-22	NM_001013706	exon3	c.C237T	p.L79L	GTGCTCGAGCAGC	.	104.0	54.0	7.0	0.0	G|0.998;A|0.002	Atlas-SNP
FASTKD5	60493	hgsc.bcm.edu	37	20	3128060	3128060	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	FASTKD5-90	NM_021826	exon2	c.A1657G	p.M553V	AATTCATATCCTT	.	96.0	5.0	89.0	0.0	.	Atlas-SNP
MRPL40	64976	hgsc.bcm.edu	37	22	19422330	19422330	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	MRPL40-90	NM_003776	exon3	c.G209T	p.R70M	TGAAAAGGAAGAT	.	69.0	4.0	66.0	0.0	.	Atlas-SNP
TEKT4	150483	hgsc.bcm.edu	37	2	95539855	95539855	+	Splice_Site	SNP	T	T	G	rs201662522	byfrequency	TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	TEKT4-155	NM_144705	exon3	c.713+2T>G	.	GAGAGGTGGGCCC	.	122.0	10.0	126.0	0.0	T|0.970;G|0.030	Atlas-SNP
ACSL3	2181	hgsc.bcm.edu	37	2	223782837	223782837	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	ACSL3-228	NM_004457	exon6	c.C630T	p.I210I	CAACATCATTACT	.	81.0	13.0	56.0	0.0	.	Atlas-SNP
CRIPAK	285464	hgsc.bcm.edu	37	4	1388848	1388848	+	Silent	SNP	A	A	C	rs74511366	byfrequency	TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	CRIPAK-90	NM_175918	exon1	c.A549C	p.P183P	CGTGCCAACGTGG	.	167.0	12.0	62.0	0.0	A|0.993;C|0.000;G|0.006	Atlas-SNP
OTOP1	133060	hgsc.bcm.edu	37	4	4228456	4228456	+	Silent	SNP	G	G	T	rs73191872	bycluster;by1000genomes	TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	OTOP1-92	NM_177998	exon1	c.C136A	p.R46R	CGCCCCGCCGGGG	.	75.0	20.0	8.0	0.0	.	Atlas-SNP
OTOP1	133060	hgsc.bcm.edu	37	4	4228472	4228472	+	Silent	SNP	T	T	C	rs76810534		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	OTOP1-92	NM_177998	exon1	c.A120G	p.E40E	CGGGGATTCCGGG	.	49.0	14.0	6.0	0.0	.	Atlas-SNP
RAPGEF2	9693	hgsc.bcm.edu	37	4	160252876	160252876	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	RAPGEF2-637	NM_014247	exon9	c.C1187G	p.P396R	AAGCTCCTTTGCC	.	146.0	47.0	182.0	0.0	.	Atlas-SNP
ADAMTS6	11174	hgsc.bcm.edu	37	5	64468661	64468661	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	ADAMTS6-226	NM_197941	exon23	c.C3085T	p.Q1029X	TTACCTGGCCCCA	.	71.0	6.0	84.0	0.0	.	Atlas-SNP
PCDHA8	56140	hgsc.bcm.edu	37	5	140222697	140222697	+	Silent	SNP	G	G	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	PCDHA8-92	NM_031856	exon1	c.G1791T	p.V597V	CGCAGTGGACGCC	.	283.0	44.0	90.0	0.0	.	Atlas-SNP
SLC35B2	347734	hgsc.bcm.edu	37	6	44222996	44222996	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	SLC35B2-91	NM_178148	exon4	c.G746A	p.G249E	CTGACCCCAATGG	.	162.0	33.0	147.0	0.0	.	Atlas-SNP
FAM46A	55603	hgsc.bcm.edu	37	6	82461742	82461742	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	FAM46A-90	NM_017633	exon2	c.C117T	p.G39G	GTCGCCGCCGCCG	.	72.0	6.0	24.0	0.0	.	Atlas-SNP
LAMA4	3910	hgsc.bcm.edu	37	6	112460964	112460964	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	LAMA4-140	NM_001105207	exon23	c.C3079A	p.P1027T	CACATGGCACTGA	.	79.0	4.0	105.0	0.0	.	Atlas-SNP
GRM1	2911	hgsc.bcm.edu	37	6	146678777	146678777	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	GRM1-1080	NM_001114329	exon6	c.A1549G	p.S517G	AACAAGAGTGGAG	.	202.0	24.0	192.0	0.0	.	Atlas-SNP
SDR16C5	195814	hgsc.bcm.edu	37	8	57221513	57221513	+	Missense_Mutation	SNP	C	C	G	rs140271354	alternate_allele	TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	SDR16C5-92	NM_138969	exon4	c.G539C	p.G180A	CTTAATCCAGCTG	.	70.0	5.0	49.0	0.0	C|1.000;T|0.000	Atlas-SNP
OMD	4958	hgsc.bcm.edu	37	9	95179219	95179219	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5JO-01A-11D-A29I-10	TCGA-OR-A5JO-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	f124772a-7861-4fc1-a7cd-da437fbccf02	80f11d6b-2e96-4c29-bd49-ea8f1a398129	.	OMD-206	NM_005014	exon2	c.T622C	p.F208L	TGGCAAAGATTTT	.	69.0	6.0	62.0	0.0	.	Atlas-SNP
