Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Algorithm
SLC25A16	8034	hgsc.bcm.edu	37	10	70243288	70243288	+	Silent	SNP	G	G	C	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SLC25A16-90	NM_152707	exon9	c.C900G	p.L300L	ACGATAGAGTCCT	.	51.0	12.0	38.0	0.0	.	Atlas-SNP
NTF3	4908	hgsc.bcm.edu	37	12	5604093	5604093	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	NTF3-205	NM_001102654	exon2	c.G752A	p.R251Q	GCTGGCGGTGGAT	.	79.0	24.0	59.0	0.0	.	Atlas-SNP
VWF	7450	hgsc.bcm.edu	37	12	6174404	6174404	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	VWF-163	NM_000552	exon11	c.A1192T	p.S398C	CAAAGCTCTTGAA	.	170.0	57.0	111.0	0.0	.	Atlas-SNP
OR4K5	79317	hgsc.bcm.edu	37	14	20389141	20389141	+	Missense_Mutation	SNP	A	A	C	rs200386813	alternate_allele	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	OR4K5-70	NM_001005483	exon1	c.A376C	p.I126L	GTAGCCATATGCA	.	259.0	42.0	163.0	0.0	A|0.999;G|0.001	Atlas-SNP
HECTD1	25831	hgsc.bcm.edu	37	14	31647449	31647449	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	HECTD1-570	NM_015382	exon3	c.G152A	p.R51H	AAAGTGCGAGGAG	.	40.0	13.0	33.0	0.0	.	Atlas-SNP
TTLL5	23093	hgsc.bcm.edu	37	14	76219245	76219245	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	TTLL5-92	NM_015072	exon18	c.C1497T	p.L499L	CTACCTCGAGCAT	.	35.0	12.0	32.0	0.0	.	Atlas-SNP
AMN	81693	hgsc.bcm.edu	37	14	103396993	103396994	+	In_Frame_Ins	INS	-	-	GCCGGG	rs36040113		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	AMN-90	NM_030943	exon12	c.1338_1339insGCCGGG	p.F446delinsFAG	.	.	77.0	15.0	10.0	0.0	-|1.000;|0.000	Atlas-Indel
CHD2	1106	hgsc.bcm.edu	37	15	93521561	93521561	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	CHD2-229	NM_001271	exon21	c.A2675G	p.Q892R	ACCCCCAGAATGA	.	45.0	11.0	37.0	0.0	.	Atlas-SNP
MYH11	4629	hgsc.bcm.edu	37	16	15809040	15809040	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	MYH11-666	NM_001040114	exon40	c.C5615A	p.A1872D	TGCTCGGCCATCT	.	40.0	4.0	39.0	0.0	.	Atlas-SNP
FLCN	201163	hgsc.bcm.edu	37	17	17131266	17131266	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	FLCN-1292	NM_144997	exon4	c.C186A	p.S62R	TGCGGGGCTGTGC	.	196.0	69.0	123.0	0.0	.	Atlas-SNP
EIF1	10209	hgsc.bcm.edu	37	17	39847059	39847059	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	EIF1-90	NM_005801	exon4	c.T323C	p.L108P	ATCAGCTGAAGGT	.	126.0	48.0	120.0	0.0	.	Atlas-SNP
KRTAP4-5	85289	hgsc.bcm.edu	37	17	39305774	39305775	+	In_Frame_Ins	INS	-	-	TGGCAGCAGCTGGGG	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	KRTAP4-5-90	NM_033188	exon1	c.246_247insCCCCAGCTGCTGCCA	p.Q82delinsHPSCCQ	.	.	90.0	59.0	11.0	0.0	.	Atlas-Indel
ULK2	9706	hgsc.bcm.edu	37	17	19770717	19770718	+	In_Frame_Ins	INS	-	-	CCA	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	ULK2-334	NM_014683	exon1	c.14_15insTGG	p.G5delinsVG	.	.	43.0	11.0	8.0	0.0	.	Pindel
SERPINB12	89777	hgsc.bcm.edu	37	18	61223496	61223496	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SERPINB12-227	NM_080474	exon1	c.T104C	p.L35P	TGAGCCTCTCAGC	.	136.0	51.0	112.0	0.0	.	Atlas-SNP
DMKN	93099	hgsc.bcm.edu	37	19	36002386	36002386	+	Missense_Mutation	SNP	C	C	T	rs117522133	byfrequency	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	DMKN-155	NM_033317	exon5	c.G845A	p.S282N	CCGCCACTGCTGC	.	66.0	21.0	30.0	0.0	C|0.945;T|0.055	Atlas-SNP
DMKN	93099	hgsc.bcm.edu	37	19	36002389	36002389	+	Missense_Mutation	SNP	C	C	T	rs142519211	byfrequency	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	DMKN-155	NM_033317	exon5	c.G842A	p.S281N	CCACTGCTGCCGC	.	63.0	18.0	30.0	0.0	C|0.957;T|0.043	Atlas-SNP
SPTBN4	57731	hgsc.bcm.edu	37	19	41063159	41063159	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SPTBN4-94	NM_020971	exon26	c.C5520T	p.F1840F	GTTCTTCAGTGAC	.	135.0	41.0	105.0	0.0	.	Atlas-SNP
DHCR24	1718	hgsc.bcm.edu	37	1	55337052	55337052	+	Missense_Mutation	SNP	C	C	G	rs181555625	alternate_allele	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	DHCR24-91	NM_014762	exon5	c.G847C	p.V283L	TCATGACCCCTGT	.	60.0	6.0	80.0	0.0	C|0.999;A|0.000	Atlas-SNP
FCRL2	79368	hgsc.bcm.edu	37	1	157740445	157740445	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	FCRL2-92	NM_030764	exon3	c.65delT	p.L22fs	.	.	56.0	16.0	35.0	0.0	.	Atlas-Indel
TRIB3	57761	hgsc.bcm.edu	37	20	368653	368653	+	Splice_Site	SNP	A	A	G	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	TRIB3-359	.	.	.	.	TTTACCAGATGCG	.	46.0	17.0	40.0	0.0	.	Atlas-SNP
C21orf58	54058	hgsc.bcm.edu	37	21	47721985	47721986	+	In_Frame_Ins	INS	-	-	TGGTGG	rs71318063	bycluster;by1000genomes;alternate_allele	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	C21orf58-91	NM_058180	exon8	c.897_898insCCACCA	p.H299delinsHHH	.	.	59.0	11.0	6.0	0.0	-|0.500;TGG|0.500	Pindel
SPECC1L	23384	hgsc.bcm.edu	37	22	24709364	24709364	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SPECC1L-92	NM_001145468	exon3	c.C237G	p.C79W	CACCTGCCCATCT	.	233.0	84.0	164.0	0.0	.	Atlas-SNP
C2orf71	388939	hgsc.bcm.edu	37	2	29295883	29295883	+	Silent	SNP	T	T	A	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	C2orf71-91	NM_001029883	exon1	c.A1245T	p.S415S	AGCCCCTGAGAGC	.	159.0	58.0	118.0	0.0	.	Atlas-SNP
SLC5A7	60482	hgsc.bcm.edu	37	2	108627278	108627278	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SLC5A7-93	NM_021815	exon9	c.C1704T	p.S568S	TGATTCCAGTCCA	.	21.0	10.0	18.0	0.0	.	Atlas-SNP
IWS1	55677	hgsc.bcm.edu	37	2	128281317	128281317	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	IWS1-91	NM_017969	exon2	c.G85C	p.G29R	CCTCACCGTCTGA	.	101.0	33.0	47.0	0.0	.	Atlas-SNP
HJURP	55355	hgsc.bcm.edu	37	2	234750050	234750050	+	Missense_Mutation	SNP	G	G	A	rs148843421	byfrequency	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	HJURP-69	NM_018410	exon8	c.C1376T	p.P459L	GAGTCCGGGAGGC	.	82.0	17.0	77.0	0.0	G|1.000;A|0.000	Atlas-SNP
PDCD6IP	10015	hgsc.bcm.edu	37	3	33877676	33877676	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	PDCD6IP-228	NM_001162429	exon8	c.C990T	p.D330D	TCCAGACCTTAAA	.	153.0	53.0	110.0	0.0	.	Atlas-SNP
CTNNB1	1499	hgsc.bcm.edu	37	3	41266136	41266136	+	Missense_Mutation	SNP	T	T	C	rs121913407	bycluster	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	CTNNB1,NS,carcinoma,0	CTNNB1-24361	NM_001098210	exon3	c.T133C	p.S45P	GCTCCTTCTCTGA	.	134.0	57.0	116.0	0.0	.	Atlas-SNP
CNBP	7555	hgsc.bcm.edu	37	3	128889366	128889366	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	CNBP-226	NM_001127193	exon5	c.A467G	p.E156G	TTGACTTCACTTG	.	77.0	4.0	57.0	0.0	.	Atlas-SNP
CRIPAK	285464	hgsc.bcm.edu	37	4	1389070	1389070	+	Silent	SNP	A	A	G	rs151096093	byfrequency	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	CRIPAK-90	NM_175918	exon1	c.A771G	p.G257G	ATGTGGAGTGCCC	.	43.0	14.0	6.0	0.0	A|0.981;G|0.019	Atlas-SNP
GABRB1	2560	hgsc.bcm.edu	37	4	47408836	47408836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	GABRB1-92	NM_000812	exon8	c.G973A	p.A325T	GAGTATGCCTTTG	.	98.0	39.0	80.0	0.0	.	Atlas-SNP
RAD50	10111	hgsc.bcm.edu	37	5	131927722	131927722	+	Silent	SNP	T	T	C	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	RAD50-229	NM_005732	exon11	c.T1789C	p.L597L	GCCAAATTGAAGT	.	144.0	54.0	118.0	0.0	.	Atlas-SNP
PCDHB5	26167	hgsc.bcm.edu	37	5	140515569	140515569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	PCDHB5-95	NM_015669	exon1	c.C553T	p.R185C	CATAATCGCGGAG	.	142.0	57.0	136.0	0.0	.	Atlas-SNP
RANBP17	64901	hgsc.bcm.edu	37	5	170648797	170648797	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	RANBP17-524	NM_022897	exon22	c.A2375G	p.N792S	CTCCTAATGGAAT	.	29.0	13.0	34.0	0.0	.	Atlas-SNP
ATXN1	6310	hgsc.bcm.edu	37	6	16327900	16327900	+	Missense_Mutation	SNP	C	C	A	rs200111316		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	ATXN1-93	NM_000332	exon8	c.G642T	p.Q214H	CTGCTGCTGCTGC	.	52.0	9.0	14.0	0.0	.	Atlas-SNP
SNAPC4	6621	hgsc.bcm.edu	37	9	139277994	139277995	+	In_Frame_Ins	INS	-	-	GCTGCT	rs147271628	bycluster;by1000genomes;alternate_allele	TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SNAPC4-90	NM_003086	exon15	c.1627_1628insAGCAGC	p.E543delinsSSE	.	.	107.0	17.0	28.0	0.0	.	Pindel
SERPINA7	6906	hgsc.bcm.edu	37	X	105277575	105277575	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-OR-A5L3-01A-11D-A29I-10	TCGA-OR-A5L3-10A-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	20de8d93-d3ca-4127-a242-4b4883523118	4a788687-ee2a-41b7-809d-410076aa453b	.	SERPINA7-226	NM_000354	exon5	c.T1164A	p.D388E	AGATCTATCAATT	.	230.0	99.0	233.0	0.0	.	Atlas-SNP
