Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Algorithm
SIRT1	23411	hgsc.bcm.edu	37	10	69651221	69651221	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	SIRT1-226	NM_012238	exon4	c.C851T	p.A284V	GCCTTGCTGTAGA	.	119.0	40.0	129.0	0.0	.	Atlas-SNP
CYP26C1	340665	hgsc.bcm.edu	37	10	94821064	94821064	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CYP26C1-90	NM_183374	exon1	c.C44T	p.A15V	GGGCGGCGGGCAC	.	71.0	20.0	29.0	0.0	.	Atlas-SNP
LYZL1	84569	hgsc.bcm.edu	37	10	29599974	29599975	+	Frame_Shift_Del	DEL	TG	TG	-	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	TG	TG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	LYZL1-90	NM_032517	exon5	c.570_571del	p.190_191del	.	.	148.0	28.0	137.0	0.0	.	Atlas-Indel
OR52E2	119678	hgsc.bcm.edu	37	11	5080032	5080032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	OR52E2-71	NM_001005164	exon1	c.C826T	p.L276F	CTAGGAGTATATG	.	140.0	59.0	155.0	0.0	.	Atlas-SNP
OR5D13	390142	hgsc.bcm.edu	37	11	55541619	55541619	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	OR5D13-71	NM_001001967	exon1	c.C706G	p.R236G	AGTGGGCGCCAGA	.	91.0	15.0	75.0	0.0	.	Atlas-SNP
KRT75	9119	hgsc.bcm.edu	37	12	52828026	52828026	+	Silent	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	KRT75-90	NM_004693	exon1	c.G63A	p.S21S	GATGGCCGAGGTG	.	57.0	17.0	35.0	0.0	.	Atlas-SNP
ZNF664-FAM101A	0	hgsc.bcm.edu	37	12	124798764	124798764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	.	NM_001204299	exon5	c.C101T	p.S34L	ACGCCTCGGAGAA	.	502.0	79.0	231.0	0.0	.	Atlas-SNP
UBL3	5412	hgsc.bcm.edu	37	13	30346294	30346294	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	UBL3-90	NM_007106	exon3	c.C178A	p.L60I	AAATAAGTCGTAG	.	29.0	12.0	71.0	0.0	.	Atlas-SNP
SOHLH2	54937	hgsc.bcm.edu	37	13	36748932	36748932	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	SOHLH2-90	NM_017826	exon7	c.C716T	p.A239V	ACTGAAGCCGCAT	.	68.0	17.0	109.0	0.0	.	Atlas-SNP
TMEM63C	57156	hgsc.bcm.edu	37	14	77723002	77723002	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	.	NM_020431	exon24	c.C2354T	p.A785V	GCTTTGCGAGGGA	.	142.0	36.0	132.0	0.0	.	Atlas-SNP
MPI	4351	hgsc.bcm.edu	37	15	75185139	75185139	+	Silent	SNP	A	A	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	MPI-92	NM_002435	exon4	c.A483G	p.L161L	CTTTCTAAAGAGT	.	103.0	33.0	128.0	0.0	.	Atlas-SNP
AMDHD2	51005	hgsc.bcm.edu	37	16	2580311	2580311	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	AMDHD2-155	NM_001145815	exon11	c.G1336C	p.E446Q	GTATGGGAGGCAC	.	144.0	31.0	62.0	0.0	.	Atlas-SNP
CDH13	1012	hgsc.bcm.edu	37	16	83378514	83378514	+	Silent	SNP	G	G	T	rs201452763	alternate_allele	TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CDH13-67	NM_001220488	exon7	c.G825T	p.P275P	GGGGCCGGTGCCT	.	114.0	17.0	69.0	0.0	.	Atlas-SNP
MYH8	4626	hgsc.bcm.edu	37	17	10310241	10310241	+	Missense_Mutation	SNP	C	C	T	rs28932773		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	MYH8-101	NM_002472	exon18	c.G2021A	p.R674Q	ATACACCGTACGA	.	116.0	27.0	139.0	0.0	.	Atlas-SNP
CPLX4	339302	hgsc.bcm.edu	37	18	56979929	56979929	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CPLX4-91	NM_181654	exon2	c.C243A	p.Y81X	GAGCCTGTATTTT	.	60.0	4.0	71.0	0.0	.	Atlas-SNP
EVI5L	115704	hgsc.bcm.edu	37	19	7915003	7915004	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	EVI5L-91	NM_001159944	exon5	c.748_749insT	p.L250fs	.	.	88.0	15.0	70.0	0.0	.	Atlas-Indel
PTPRF	5792	hgsc.bcm.edu	37	1	44057031	44057031	+	Silent	SNP	A	A	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	PTPRF-232	NM_130440	exon9	c.A1338G	p.G446G	GCGGGGATACCGC	.	72.0	18.0	46.0	0.0	.	Atlas-SNP
JAK1	3716	hgsc.bcm.edu	37	1	65321267	65321267	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	JAK1-3900	NM_002227	exon11	c.C1573T	p.H525Y	TGAGGTGGCTCAT	.	107.0	15.0	142.0	0.0	.	Atlas-SNP
HMCN1	83872	hgsc.bcm.edu	37	1	186047340	186047340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	HMCN1-113	NM_031935	exon55	c.G8587A	p.V2863I	TATGATGTCCGTG	.	118.0	22.0	116.0	0.0	.	Atlas-SNP
TMEM206	55248	hgsc.bcm.edu	37	1	212560297	212560297	+	Silent	SNP	A	A	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	TMEM206-153	NM_001198862	exon4	c.T462A	p.R154R	TTTCTCACGAAAG	.	167.0	11.0	154.0	0.0	.	Atlas-SNP
ADSS	159	hgsc.bcm.edu	37	1	244583531	244583531	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	ADSS-229	NM_001126	exon8	c.G731C	p.G244A	GGTGGTCCATGTA	.	50.0	14.0	96.0	0.0	.	Atlas-SNP
PTPRA	5786	hgsc.bcm.edu	37	20	2945574	2945574	+	Silent	SNP	C	C	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	PTPRA-227	NM_080840	exon5	c.C141G	p.A47A	AGAGGCCAAAACT	.	159.0	28.0	87.0	0.0	.	Atlas-SNP
ARFGEF2	10564	hgsc.bcm.edu	37	20	47605959	47605959	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	ARFGEF2-358	NM_006420	exon19	c.C2671T	p.R891W	CATGTCCGGCCAA	.	191.0	96.0	83.0	0.0	.	Atlas-SNP
CTCFL	140690	hgsc.bcm.edu	37	20	56090878	56090878	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CTCFL-292	NM_001269047	exon6	c.A1072G	p.K358E	GGCGCTTCAATTT	.	79.0	9.0	43.0	0.0	.	Atlas-SNP
PIGU	128869	hgsc.bcm.edu	37	20	33225690	33225693	+	Frame_Shift_Del	DEL	CTTT	CTTT	-	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	CTTT	CTTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	PIGU-226	NM_080476	exon5	c.416_419del	p.139_140del	.	.	157.0	35.0	90.0	0.0	.	Atlas-Indel
MKI67IP	84365	hgsc.bcm.edu	37	2	122493289	122493289	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	MKI67IP-90	NM_032390	exon2	c.A143G	p.Y48C	CGCACATAGACTA	.	47.0	12.0	44.0	0.0	.	Atlas-SNP
NEB	4703	hgsc.bcm.edu	37	2	152382545	152382545	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	NEB-145	NM_001164507	exon150	c.A22088T	p.Q7363L	GAGCCCTGTGCCA	.	211.0	44.0	148.0	0.0	.	Atlas-SNP
XIRP2	129446	hgsc.bcm.edu	37	2	168099448	168099448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	XIRP2-104	NM_001199144	exon7	c.G880T	p.D294Y	GAAAAAGATTATA	.	52.0	4.0	74.0	0.0	.	Atlas-SNP
PID1	55022	hgsc.bcm.edu	37	2	229890685	229890685	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	PID1-94	NM_001100818	exon3	c.G317A	p.R106Q	AATGGCCGGATTT	.	183.0	67.0	155.0	0.0	.	Atlas-SNP
UGT1A5	54579	hgsc.bcm.edu	37	2	234621931	234621931	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	UGT1A5-3	NM_019078	exon1	c.A294T	p.Q98H	CACTCAATCGTTC	.	153.0	27.0	119.0	0.0	.	Atlas-SNP
SI	6476	hgsc.bcm.edu	37	3	164748583	164748583	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	SI-104	NM_001041	exon25	c.G2809C	p.E937Q	CATTTTCTGAGAA	.	147.0	29.0	121.0	0.0	.	Atlas-SNP
CRIPAK	285464	hgsc.bcm.edu	37	4	1388726	1388726	+	Missense_Mutation	SNP	T	T	C	rs199689156	byfrequency	TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CRIPAK-90	NM_175918	exon1	c.T427C	p.C143R	TGCCCATGCGGAG	.	146.0	19.0	33.0	0.0	T|0.980;C|0.020	Atlas-SNP
ANK2	287	hgsc.bcm.edu	37	4	114244940	114244940	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	ANK2-583	NM_001127493	exon28	c.G2863T	p.D955Y	GAACGTGACAACA	.	161.0	27.0	147.0	0.0	.	Atlas-SNP
DNAH5	1767	hgsc.bcm.edu	37	5	13913969	13913969	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	DNAH5-182	NM_001369	exon11	c.C1419T	p.F473F	AGTTTCGAATTTT	.	81.0	6.0	85.0	0.0	.	Atlas-SNP
DND1	373863	hgsc.bcm.edu	37	5	140052320	140052320	+	Missense_Mutation	SNP	T	T	C	rs201446376	byfrequency	TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	DND1-90	NM_194249	exon3	c.A314G	p.Y105C	GAGCTGTAGCGGG	.	76.0	7.0	8.0	0.0	T|0.983;C|0.016	Atlas-SNP
PCDHB10	56126	hgsc.bcm.edu	37	5	140572420	140572420	+	Missense_Mutation	SNP	A	A	G	rs61740634		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	PCDHB10-92	NM_018930	exon1	c.A295G	p.K99E	GGCCCTAAAGAGC	.	518.0	75.0	264.0	0.0	A|0.986;G|0.014	Atlas-SNP
GRM6	2916	hgsc.bcm.edu	37	5	178419079	178419079	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	GRM6-588	NM_000843	exon2	c.C510T	p.P170P	GATCTGGGGTATC	.	132.0	79.0	48.0	0.0	.	Atlas-SNP
CANX	821	hgsc.bcm.edu	37	5	179149880	179149880	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CANX-90	NM_001024649	exon11	c.A1258G	p.S420G	CCTTTTAGTGCTA	.	137.0	28.0	50.0	0.0	.	Atlas-SNP
FBXL13	222235	hgsc.bcm.edu	37	7	102553550	102553550	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	FBXL13-226	NM_001111038	exon11	c.C991T	p.L331F	CAGAGAGGTCCAG	.	138.0	13.0	142.0	0.0	.	Atlas-SNP
TMEM176A	55365	hgsc.bcm.edu	37	7	150500884	150500884	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	TMEM176A-92	NM_018487	exon5	c.G519T	p.R173S	CAGAAGGCTACAC	.	77.0	19.0	71.0	0.0	.	Atlas-SNP
CDC37L1	55664	hgsc.bcm.edu	37	9	4685143	4685143	+	Silent	SNP	G	G	A	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	CDC37L1-90	NM_017913	exon2	c.G399A	p.K133K	TAGCAAGGATGTT	.	181.0	66.0	181.0	0.0	.	Atlas-SNP
IARS	3376	hgsc.bcm.edu	37	9	94985663	94985663	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	IARS-92	NM_013417	exon32	c.A3518G	p.Y1173C	TTGATATACTGAC	.	152.0	67.0	131.0	0.0	.	Atlas-SNP
ASB11	140456	hgsc.bcm.edu	37	X	15332559	15332559	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	ASB11-289	NM_001012428	exon1	c.G50C	p.R17P	CTGATACGTTCTG	.	35.0	15.0	51.0	0.0	.	Atlas-SNP
DMD	1756	hgsc.bcm.edu	37	X	32407770	32407770	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	DMD-265	NM_004011	exon4	c.A343C	p.M115L	ACTTCATGGAGAC	.	38.0	15.0	46.0	0.0	.	Atlas-SNP
MCF2	4168	hgsc.bcm.edu	37	X	138713564	138713564	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-OR-A5L6-01A-11D-A29I-10	TCGA-OR-A5L6-10C-01D-A29L-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	d6782167-c280-47be-9306-dd6794cd6c34	f9f463db-8197-4665-b7a3-a2f02f00e992	.	MCF2-227	NM_001099855	exon6	c.T458C	p.I153T	CTGAAGATGATCC	.	144.0	8.0	110.0	0.0	.	Atlas-SNP
