Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Algorithm
ZNF503	84858	hgsc.bcm.edu	37	10	77158945	77158945	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ZNF503-91	NM_032772	exon2	c.C1503A	p.Y501X	GTAGGGGTAGAGG	.	67.0	28.0	19.0	0.0	.	Atlas-SNP
ZNF503	84858	hgsc.bcm.edu	37	10	77158939	77158940	+	Nonsense_Mutation	INS	-	-	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ZNF503-91	NM_032772	exon2	c.1509_1510insA	p.Y503_G504delinsX	.	.	83.0	30.0	22.0	0.0	.	Atlas-Indel
PHRF1	57661	hgsc.bcm.edu	37	11	608465	608465	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PHRF1-22	NM_020901	exon14	c.G3006C	p.K1002N	CAGGAAGAAGGCC	.	190.0	62.0	66.0	0.0	.	Atlas-SNP
MLL	4297	hgsc.bcm.edu	37	11	118374844	118374844	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	MLL-1255	NM_005933	exon27	c.G8228C	p.R2743T	CAAAAAGAAATGG	.	56.0	23.0	82.0	0.0	.	Atlas-SNP
ATN1	1822	hgsc.bcm.edu	37	12	7045924	7045924	+	Missense_Mutation	SNP	G	G	T	rs199988271	alternate_allele	TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ATN1-139	NM_001007026	exon5	c.G1494T	p.Q498H	GCAGCAGCAGCAG	.	306.0	25.0	88.0	0.0	G|0.999;A|0.001	Atlas-SNP
PPM1H	57460	hgsc.bcm.edu	37	12	63131354	63131354	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PPM1H-637	NM_020700	exon5	c.C882G	p.I294M	ATTTCTGATGATT	.	159.0	32.0	103.0	0.0	.	Atlas-SNP
C14orf159	80017	hgsc.bcm.edu	37	14	91647656	91647656	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	C14orf159-92	NM_001102368	exon8	c.C857A	p.P286H	AAGATCCTCTGCA	.	78.0	22.0	57.0	0.0	.	Atlas-SNP
AHNAK2	113146	hgsc.bcm.edu	37	14	105414374	105414374	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	AHNAK2-47	NM_138420	exon7	c.G7414C	p.A2472P	TGTCCGCCACAGA	.	172.0	60.0	129.0	0.0	.	Atlas-SNP
TYRO3	7301	hgsc.bcm.edu	37	15	41853473	41853473	+	Silent	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	TYRO3-1388	NM_006293	exon2	c.C273T	p.I91I	GTACATCCCAGTC	.	153.0	65.0	88.0	0.0	.	Atlas-SNP
TMC5	79838	hgsc.bcm.edu	37	16	19451450	19451450	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	TMC5-91	NM_001105248	exon3	c.G90T	p.L30F	GTATTTGAAAACT	.	134.0	37.0	73.0	0.0	.	Atlas-SNP
TMC5	79838	hgsc.bcm.edu	37	16	19488768	19488768	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	TMC5-91	NM_024780	exon9	c.C1359G	p.I453M	AAACATCTTTTTG	.	211.0	50.0	152.0	0.0	.	Atlas-SNP
SLC35G6	643664	hgsc.bcm.edu	37	17	7385476	7385476	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001102614	exon2	c.C173T	p.S58F	CCCTTTCTCATAT	.	220.0	43.0	93.0	0.0	.	Atlas-SNP
GAS2L2	246176	hgsc.bcm.edu	37	17	34073260	34073260	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	GAS2L2-227	NM_139285	exon6	c.C1256G	p.S419C	ACCCAAGATGTGG	.	120.0	57.0	88.0	0.0	.	Atlas-SNP
TP53	7157	hgsc.bcm.edu	37	17	7579470	7579471	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	TP53,NS,carcinoma,0	TP53-70225	NM_001126113	exon4	c.217_218insC	p.V73fs	.	.	69.0	52.0	53.0	0.0	.	Atlas-Indel
MYOM1	8736	hgsc.bcm.edu	37	18	3079307	3079307	+	Silent	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	MYOM1-94	NM_019856	exon33	c.G4230A	p.K1410K	CCCGGTCTTAACT	.	131.0	26.0	125.0	0.0	.	Atlas-SNP
GATA6	2627	hgsc.bcm.edu	37	18	19780774	19780774	+	Silent	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	GATA6-514	NM_005257	exon7	c.G1776C	p.L592L	CGCCCTGGCCCTG	.	93.0	15.0	18.0	0.0	.	Atlas-SNP
MUC16	94025	hgsc.bcm.edu	37	19	9090327	9090327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	MUC16-566	NM_024690	exon1	c.C1488A	p.S496R	AGCTGTGCTGGAA	.	162.0	40.0	116.0	0.0	.	Atlas-SNP
IGFL1	374918	hgsc.bcm.edu	37	19	46733364	46733364	+	Splice_Site	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_198541	exon2	c.26-1G>C	.	CCCACAGCTGTCT	.	110.0	39.0	71.0	0.0	.	Atlas-SNP
PPFIA3	8541	hgsc.bcm.edu	37	19	49637077	49637077	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PPFIA3-226	NM_003660	exon10	c.G1186A	p.E396K	AATTTTGAGGAGC	.	475.0	134.0	159.0	0.0	.	Atlas-SNP
SSC5D	284297	hgsc.bcm.edu	37	19	56029616	56029616	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001144950	exon14	c.C3973A	p.P1325T	CCTCACCCCACAA	.	119.0	8.0	72.0	0.0	.	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	37	19	58385790	58385790	+	Missense_Mutation	SNP	G	G	T	rs111727691		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001144989	exon3	c.C968A	p.P323H	TCATAAGGTCTTT	.	82.0	9.0	87.0	0.0	G|0.500;T|0.500	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	37	19	58385793	58385793	+	Missense_Mutation	SNP	C	C	T	rs113623532		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001144989	exon3	c.G965A	p.R322K	TAAGGTCTTTTCC	.	80.0	9.0	84.0	0.0	C|0.500;T|0.500	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	37	19	58385798	58385798	+	Silent	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001144989	exon3	c.G960A	p.G320G	TCTTTTCCCAGTG	.	74.0	9.0	77.0	0.0	.	Atlas-SNP
ZNF814	730051	hgsc.bcm.edu	37	19	58385799	58385799	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001144989	exon3	c.G959A	p.G320E	CTTTTCCCAGTGT	.	71.0	9.0	77.0	0.0	.	Atlas-SNP
IGSF21	84966	hgsc.bcm.edu	37	1	18691917	18691917	+	Silent	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	IGSF21-156	NM_032880	exon6	c.C741T	p.S247S	CCCCTCCCGTGGC	.	328.0	30.0	171.0	0.0	.	Atlas-SNP
USP48	84196	hgsc.bcm.edu	37	1	22055060	22055060	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	USP48-659	NM_001032730	exon11	c.C1453G	p.L485V	CTTACAGACCAGC	.	152.0	40.0	100.0	0.0	.	Atlas-SNP
UTP11L	51118	hgsc.bcm.edu	37	1	38482069	38482069	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	UTP11L-90	NM_016037	exon2	c.G102T	p.K34N	GAAAAAGAAAGAT	.	67.0	16.0	41.0	0.0	.	Atlas-SNP
PTBP2	58155	hgsc.bcm.edu	37	1	97272469	97272469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PTBP2-90	NM_021190	exon11	c.G1126A	p.D376N	AAGAAAGACAGCG	.	99.0	19.0	96.0	0.0	.	Atlas-SNP
DENND4B	9909	hgsc.bcm.edu	37	1	153907278	153907278	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	DENND4B-69	NM_014856	exon18	c.G2731C	p.E911Q	CCTGCTCCTGCTG	.	129.0	10.0	46.0	0.0	.	Atlas-SNP
CD1E	913	hgsc.bcm.edu	37	1	158324185	158324185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	CD1E-93	NM_001185107	exon2	c.C77A	p.S26Y	TACAATCCTATCA	.	94.0	21.0	89.0	0.0	.	Atlas-SNP
OR6K6	128371	hgsc.bcm.edu	37	1	158725430	158725430	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	OR6K6-69	NM_001005184	exon1	c.C825A	p.F275L	TGTGTTCTTGCTA	.	403.0	92.0	278.0	0.0	.	Atlas-SNP
IFI16	3428	hgsc.bcm.edu	37	1	159021731	159021731	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	IFI16-91	NM_001206567	exon9	c.A1760T	p.E587V	TCCTGGAGGTATA	.	147.0	35.0	126.0	0.0	.	Atlas-SNP
IGFN1	91156	hgsc.bcm.edu	37	1	201182038	201182038	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	IGFN1-71	NM_001164586	exon12	c.G8017T	p.G2673C	TTTAAGGGTGGGG	.	163.0	38.0	137.0	0.0	.	Atlas-SNP
RAB3GAP2	25782	hgsc.bcm.edu	37	1	220369717	220369717	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	RAB3GAP2-90	NM_012414	exon10	c.G835C	p.D279H	TTTGATCAAAGGG	.	85.0	23.0	94.0	0.0	.	Atlas-SNP
PCNXL2	80003	hgsc.bcm.edu	37	1	233372603	233372603	+	Silent	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PCNXL2-91	NM_014801	exon9	c.G2346T	p.S782S	GGTTTCCGACTGG	.	132.0	12.0	100.0	0.0	.	Atlas-SNP
ACTN2	88	hgsc.bcm.edu	37	1	236902810	236902810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ACTN2-95	NM_001103	exon10	c.C1085T	p.P362L	TCATGCCCTCCGA	.	231.0	63.0	107.0	0.0	.	Atlas-SNP
CAPN14	440854	hgsc.bcm.edu	37	2	31428282	31428282	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001145122	exon2	c.G32T	p.W11L	AGCTTCCATCTGC	.	279.0	96.0	245.0	0.0	.	Atlas-SNP
HNRPLL	92906	hgsc.bcm.edu	37	2	38800509	38800509	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	HNRPLL-91	NM_138394	exon8	c.C935A	p.P312H	AGTTCAGGTGTAT	.	117.0	36.0	113.0	0.0	.	Atlas-SNP
XIRP2	129446	hgsc.bcm.edu	37	2	168104662	168104662	+	Silent	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	XIRP2-104	NM_001199144	exon7	c.C6094T	p.L2032L	GACTTTCTAATGA	.	163.0	52.0	268.0	0.0	.	Atlas-SNP
SGOL2	151246	hgsc.bcm.edu	37	2	201440158	201440158	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	SGOL2-94	NM_001160033	exon8	c.C3749T	p.S1250F	TCCTTTCTATTTT	.	109.0	32.0	163.0	0.0	.	Atlas-SNP
TOPAZ1	375337	hgsc.bcm.edu	37	3	44283769	44283769	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001145030	exon1	c.G224C	p.G75A	GGGCTGGAAAGGC	.	353.0	80.0	174.0	0.0	.	Atlas-SNP
CADPS	8618	hgsc.bcm.edu	37	3	62631437	62631437	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	CADPS-281	NM_183393	exon6	c.G1285C	p.E429Q	GTTTCTCTCCTCC	.	217.0	53.0	150.0	0.0	.	Atlas-SNP
MYLK	4638	hgsc.bcm.edu	37	3	123385189	123385189	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	MYLK-365	NM_053025	exon22	c.G3708A	p.M1236I	AGGGGGCATTGCT	.	92.0	26.0	60.0	0.0	.	Atlas-SNP
ATP13A5	344905	hgsc.bcm.edu	37	3	193039524	193039524	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ATP13A5-144	NM_198505	exon16	c.G1861T	p.V621F	TGTAGACATGGAA	.	89.0	35.0	111.0	0.0	.	Atlas-SNP
CRIPAK	285464	hgsc.bcm.edu	37	4	1388755	1388755	+	Silent	SNP	C	C	G	rs141481663	byfrequency	TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	CRIPAK-90	NM_175918	exon1	c.C456G	p.P152P	CGTGCCCATGCGG	.	102.0	11.0	7.0	0.0	C|0.960;G|0.040	Atlas-SNP
CCSER1	401145	hgsc.bcm.edu	37	4	91234151	91234151	+	Silent	SNP	T	T	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001145065	exon3	c.T1462C	p.L488L	AATAGTTTAAGAA	.	120.0	9.0	87.0	0.0	.	Atlas-SNP
ADH5	128	hgsc.bcm.edu	37	4	99996090	99996090	+	Silent	SNP	G	G	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ADH5-227	NM_000671	exon7	c.C936T	p.R312R	CCATGTGCGACCT	.	664.0	49.0	435.0	0.0	.	Atlas-SNP
INTU	27152	hgsc.bcm.edu	37	4	128608947	128608947	+	Silent	SNP	G	G	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	INTU-91	NM_015693	exon8	c.G1374A	p.Q458Q	TCAGCAGTACGAT	.	110.0	19.0	77.0	0.0	.	Atlas-SNP
GRIA2	2891	hgsc.bcm.edu	37	4	158256822	158256822	+	Splice_Site	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	GRIA2-515	NM_001083619	exon10	c.1267-1G>T	.	CATATAGGAATCT	.	89.0	5.0	120.0	0.0	.	Atlas-SNP
ARHGEF28	64283	hgsc.bcm.edu	37	5	73169041	73169041	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	.	NM_001244364	exon14	c.C1845G	p.I615M	TGTGATCGACCGA	.	230.0	64.0	185.0	0.0	.	Atlas-SNP
PCDHA8	56140	hgsc.bcm.edu	37	5	140223018	140223018	+	Silent	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PCDHA8-92	NM_031856	exon1	c.C2112A	p.I704I	CGCCATCTGCGCG	.	279.0	29.0	132.0	0.0	.	Atlas-SNP
PCDHB5	26167	hgsc.bcm.edu	37	5	140515063	140515063	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PCDHB5-95	NM_015669	exon1	c.T47G	p.F16C	TTATGTTTCTTGC	.	149.0	63.0	125.0	0.0	.	Atlas-SNP
HK3	3101	hgsc.bcm.edu	37	5	176318107	176318107	+	Silent	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	HK3-294	NM_002115	exon4	c.G345T	p.G115G	CCTATGCCCCTCA	.	109.0	13.0	60.0	0.0	.	Atlas-SNP
TRIM52	84851	hgsc.bcm.edu	37	5	180687431	180687431	+	Silent	SNP	T	T	C	rs78075294		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	TRIM52-90	NM_032765	exon1	c.A384G	p.E128E	TTCCTCTTCTTCT	.	51.0	16.0	17.0	0.0	T|0.500;C|0.500	Atlas-SNP
TRIM52	84851	hgsc.bcm.edu	37	5	180687440	180687440	+	Silent	SNP	T	T	C	rs80005177	byfrequency	TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	TRIM52-90	NM_032765	exon1	c.A375G	p.E125E	TTCTTCTTCCTCC	.	122.0	15.0	97.0	0.0	T|0.991;C|0.009	Atlas-SNP
FNIP1	96459	hgsc.bcm.edu	37	5	131007363	131007364	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	FNIP1-92	NM_133372	exon14	c.2774_2775insA	p.I925fs	.	.	85.0	26.0	102.0	0.0	.	Atlas-Indel
HIST1H3G	8355	hgsc.bcm.edu	37	6	26271439	26271439	+	Silent	SNP	C	C	G	rs41266825	byfrequency;alternate_allele	TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	HIST1H3G-90	NM_003534	exon1	c.G174C	p.S58S	CTCAGTCGACTTC	.	239.0	37.0	82.0	0.0	C|0.991;A|0.009	Atlas-SNP
ZNF184	7738	hgsc.bcm.edu	37	6	27419101	27419101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ZNF184-91	NM_007149	exon6	c.G2237A	p.R746K	TGCAGTCTCTGAT	.	139.0	20.0	109.0	0.0	.	Atlas-SNP
TNFRSF21	27242	hgsc.bcm.edu	37	6	47200618	47200618	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	TNFRSF21-227	NM_014452	exon6	c.G1851T	p.E617D	GGGAATCTCTTCA	.	195.0	32.0	92.0	0.0	.	Atlas-SNP
MUT	4594	hgsc.bcm.edu	37	6	49416590	49416590	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	MUT-91	NM_000255	exon7	c.G1383C	p.E461D	TATTCCCTCAGCT	.	156.0	24.0	108.0	0.0	.	Atlas-SNP
ICK	22858	hgsc.bcm.edu	37	6	52871155	52871155	+	Missense_Mutation	SNP	T	T	C	rs145842629	byfrequency	TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ICK-421	NM_016513	exon14	c.A1702G	p.M568V	TCTGCATAGCAGA	.	132.0	32.0	81.0	0.0	T|0.999;C|0.001	Atlas-SNP
COL19A1	1310	hgsc.bcm.edu	37	6	70890358	70890358	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	COL19A1-156	NM_001858	exon44	c.G2718T	p.E906D	GGGTGAGAGAGGA	.	218.0	33.0	143.0	0.0	.	Atlas-SNP
ASCC3	10973	hgsc.bcm.edu	37	6	101246658	101246658	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ASCC3-96	NM_006828	exon8	c.G1326C	p.R442S	GGGAATCCTTACT	.	102.0	19.0	89.0	0.0	.	Atlas-SNP
POR	5447	hgsc.bcm.edu	37	7	75615364	75615364	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	POR-23	NM_000941	exon14	c.T1793C	p.F598S	TGGCCTTCTCCCG	.	188.0	17.0	45.0	0.0	.	Atlas-SNP
SMO	6608	hgsc.bcm.edu	37	7	128851520	128851520	+	Silent	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	SMO-2451	NM_005631	exon11	c.C1845T	p.S615S	TGTCTCCTCTGCC	.	149.0	42.0	98.0	0.0	.	Atlas-SNP
PRKAG2	51422	hgsc.bcm.edu	37	7	151478345	151478345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PRKAG2-658	NM_016203	exon3	c.G359A	p.R120H	CTCATGCGTCGAG	.	36.0	21.0	40.0	0.0	.	Atlas-SNP
FAM167A	83648	hgsc.bcm.edu	37	8	11282142	11282142	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	FAM167A-90	NM_053279	exon3	c.G385A	p.E129K	GCATCTCCGTCTG	.	103.0	43.0	90.0	0.0	.	Atlas-SNP
ADRB3	155	hgsc.bcm.edu	37	8	37823625	37823625	+	Silent	SNP	C	C	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	ADRB3-522	NM_000025	exon1	c.G363T	p.V121V	GGCGGTCACACAC	.	346.0	136.0	40.0	0.0	.	Atlas-SNP
CNGB3	54714	hgsc.bcm.edu	37	8	87683246	87683246	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	CNGB3-93	NM_019098	exon4	c.G419A	p.R140H	CTTTGACGCATTC	.	52.0	14.0	80.0	0.0	.	Atlas-SNP
C9orf41	138199	hgsc.bcm.edu	37	9	77631307	77631307	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	C9orf41-92	NM_152420	exon3	c.A467G	p.D156G	AACTTATCCATGT	.	113.0	8.0	89.0	0.0	.	Atlas-SNP
PRUNE2	158471	hgsc.bcm.edu	37	9	79438595	79438595	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PRUNE2-157	NM_015225	exon6	c.G709C	p.D237H	CTCCATCTGACAG	.	196.0	48.0	139.0	0.0	.	Atlas-SNP
PNPLA4	8228	hgsc.bcm.edu	37	X	7890140	7890140	+	Splice_Site	SNP	C	C	T	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	PNPLA4-130	NM_004650	exon4	c.181-1G>A	.	ACATTCCTAAAAA	.	118.0	17.0	154.0	0.0	.	Atlas-SNP
SYTL4	94121	hgsc.bcm.edu	37	X	99955985	99955985	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-PK-A5HC-01A-11D-A30A-10	TCGA-PK-A5HC-11A-11D-A30A-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	9251b712-6bae-401a-973e-ca78f2c837e8	1dc71f1c-5f27-469f-92f0-00b5a05fe092	.	SYTL4-132	NM_001129896	exon6	c.A447T	p.R149S	TGTCTCTCTTTTA	.	70.0	44.0	133.0	0.0	.	Atlas-SNP
