Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ADORA1	134	genome.wustl.edu	37	1	203098133	203098133	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	203098133	203098133	A	T	SNP	ADORA1	NM_000674.2	human	genbank	58_37c	+1	reviewed	missense	c.164	p.D55V	1.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
AHNAK	79026	genome.wustl.edu	37	11	62284301	62284301	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	62284301	62284301	G	A	SNP	AHNAK	NM_001620.1	human	genbank	58_37c	-1	validated	missense	c.17588	p.S5863F	0.999	NULL	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMPfam_CheC	-	no_errors
ALDH1B1	219	genome.wustl.edu	37	9	38395914	38395914	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	9	38395914	38395914	G	T	SNP	ALDH1B1	NM_000692.3	human	genbank	58_37c	+1	reviewed	missense	c.169	p.V57F	0.567	HMMPfam_Aldedh,superfamily_ALDH-like	HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_ALDH-like	-	no_errors
ANP32C	23520	genome.wustl.edu	37	4	165118440	165118440	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	4	165118440	165118440	C	T	SNP	ANP32C	NM_012403.1	human	genbank	58_37c	-1	reviewed	missense	c.424	p.D142N	1.000	superfamily_L domain-like	HMMPfam_LRR_1,superfamily_L domain-like	-	no_errors
AOAH	313	genome.wustl.edu	37	7	36661342	36661342	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	7	36661342	36661342	G	A	SNP	AOAH	NM_001637.3	human	genbank	58_37c	-1	reviewed	silent	c.627	p.S209	0.000	NULL	HMMPfam_Lipase_GDSL,HMMPfam_SapB_2,HMMSmart_SapB,PatternScan_LIPASE_GDSL_SER,superfamily_Saposin_like,superfamily_Esterase_SGNH_hydro-type	-	no_errors
ARHGAP12	94134	genome.wustl.edu	37	10	32197496	32197496	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	10	32197496	32197496	C	G	SNP	ARHGAP12	NM_018287.5	human	genbank	58_37c	-1	provisional	missense	c.288	p.Q96H	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_WW,HMMSmart_SM00456,superfamily_WW domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,superfamily_PH domain-like	-	no_errors
ARID1A	8289	genome.wustl.edu	37	1	27106136	27106136	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	27106136	27106136	C	G	SNP	ARID1A	NM_006015.4	human	genbank	58_37c	+1	reviewed	missense	c.5747	p.S1916C	1.000	NULL	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like	-	no_errors
ARMCX1	51309	genome.wustl.edu	37	X	100808553	100808557	+	Frame_Shift_Del	DEL	CTGGA	CTGGA	-	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	CTGGA	CTGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	100808553	100808557	CTGGA	-	DEL	ARMCX1	NM_016608.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.640_644	p.L214fs	0.959:0.961:0.947:0.980:0.981	HMMPfam_DUF634,superfamily_ARM-type_fold	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors
ARMCX1	51309	genome.wustl.edu	37	X	100808560	100808569	+	Frame_Shift_Del	DEL	GAACAAATGA	GAACAAATGA	-	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	GAACAAATGA	GAACAAATGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	100808560	100808569	GAACAAATGA	-	DEL	ARMCX1	NM_016608.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.647_656	p.R216fs	0.993:0.993:0.986:0.995:0.995:0.996:0.994:0.996:1.000:1.000	HMMPfam_DUF634,superfamily_ARM-type_fold	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors
ASAH2C	653365	genome.wustl.edu	37	10	48033003	48033003	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	10	48033003	48033003	T	C	SNP	ASAH2C	ENST00000426610	human	ensembl	58_37c	-1	known	silent	c.522	p.K174	0.987	HMMPfam_Ceramidase_alk	HMMPfam_Ceramidase_alk	-	no_errors
BRCA2	675	genome.wustl.edu	37	13	32912555	32912555	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	13	32912555	32912555	G	T	SNP	BRCA2	NM_000059.3	human	genbank	58_37c	+1	reviewed	missense	c.4063	p.D1355Y	0.011	NULL	HMMPfam_BRCA2,HMMPfam_BRCA-2_OB1,HMMPfam_BRCA-2_OB3,HMMPfam_Tower,HMMPfam_BRCA-2_helical,superfamily_BRCA2_helical,superfamily_Nucleic_acid_OB,superfamily_SSF81878	-	no_errors
CDK14	0	genome.wustl.edu	37	7	90377067	90377067	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	7	90377067	90377067	T	C	SNP	CDK14	NM_012395.2	human	genbank	58_37c	+1	validated	silent	c.387	p.A129	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_CYTOCHROME_B5_1	-	no_errors
CR1	1378	genome.wustl.edu	37	1	207669639	207669639	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	207669639	207669639	G	A	SNP	CR1	NM_000651.4	human	genbank	58_37c	+1	reviewed	silent	c.27	p.P9	0.000	NULL	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	-	no_errors
CXorf36	79742	genome.wustl.edu	37	X	45013241	45013241	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	45013241	45013241	A	G	SNP	CXorf36	NM_176819.3	human	genbank	58_37c	-1	validated	missense	c.875	p.I292T	0.328	NULL	NULL	-	no_errors
DCC	1630	genome.wustl.edu	37	18	50589678	50589678	+	Missense_Mutation	SNP	C	C	T	rs138541235	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	18	50589678	50589678	C	T	SNP	DCC	NM_005215.3	human	genbank	58_37c	+1	reviewed	missense	c.989	p.P330L	1.000	superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_Neogenin_C,HMMPfam_I-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
ENSG00000246368	0	genome.wustl.edu	37	1	205277461	205277461	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	205277461	205277461	C	T	SNP	NUAK2	NM_030952.1	human	genbank	58_37c	-1	provisional	intronic	c.505-103	e4-103	0.000	-	-	-	no_errors
EP400	57634	genome.wustl.edu	37	12	132529374	132529374	+	Silent	SNP	C	C	T	rs147763834	byFrequency	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	132529374	132529374	C	T	SNP	EP400	NM_015409.3	human	genbank	58_37c	+1	validated	silent	c.6657	p.D2219	0.997	NULL	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HSA,superfamily_Homeodomain_like,HMMSmart_HSA,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
FLG	2312	genome.wustl.edu	37	1	152283655	152283655	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	152283655	152283655	C	T	SNP	FLG	NM_002016.1	human	genbank	58_37c	-1	reviewed	missense	c.3707	p.R1236H	0.000	HMMPfam_Filaggrin	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
GGA3	23163	genome.wustl.edu	37	17	73239562	73239562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	17	73239562	73239562	C	T	SNP	GGA3	NM_138619.2	human	genbank	58_37c	-1	reviewed	silent	c.390	p.K130	1.000	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288	HMMPfam_VHS,HMMPfam_GAT,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_ENTH/VHS domain,superfamily_Clathrin adaptor appendage domain,HMMSmart_SM00288,superfamily_GAT-like domain	-	no_errors
GUCY2C	2984	genome.wustl.edu	37	12	14839103	14839103	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	14839103	14839103	G	C	SNP	GUCY2C	NM_004963.3	human	genbank	58_37c	-1	validated	missense	c.387	p.F129L	1.000	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMSmart_SM00219,HMMPfam_ANF_receptor,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,PatternScan_GUANYLATE_CYCLASE_1,superfamily_Periplasmic binding protein-like I	-	no_errors
KIRREL	55243	genome.wustl.edu	37	1	158047872	158047872	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	158047872	158047872	C	T	SNP	KIRREL	NM_018240.5	human	genbank	58_37c	+1	validated	silent	c.294	p.Y98	0.915	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_C2-set_2,superfamily_Immunoglobulin	-	no_errors
KLHL34	257240	genome.wustl.edu	37	X	21675572	21675572	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	21675572	21675572	G	T	SNP	KLHL34	NM_153270.1	human	genbank	58_37c	-1	provisional	missense	c.335	p.T112N	0.743	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB	HMMSmart_BTB,HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central,superfamily_BTB/POZ_fold,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	8997511	8997511	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	19	8997511	8997511	G	T	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	missense	c.40911	p.F13637L	0.001	HMMPfam_SEA,superfamily_SEA domain	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
NAV1	89796	genome.wustl.edu	37	1	201687769	201687769	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	201687769	201687769	G	T	SNP	NAV1	NM_020443.4	human	genbank	58_37c	+1	reviewed	missense	c.1112	p.R371L	1.000	NULL	HMMSmart_AAA,PatternScan_PPASE,superfamily_SSF52540	-	no_errors
NEFM	4741	genome.wustl.edu	37	8	24774866	24774866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	8	24774866	24774866	G	A	SNP	NEFM	NM_005382.2	human	genbank	58_37c	+1	reviewed	missense	c.1498	p.E500K	0.958	NULL	HMMPfam_Filament_head,HMMPfam_Filament,PatternScan_IF	-	no_errors
PCDHB16	57717	genome.wustl.edu	37	5	140564292	140564292	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	5	140564292	140564292	G	T	SNP	PCDHB16	NM_020957.1	human	genbank	58_37c	+1	reviewed	missense	c.2158	p.A720S	0.000	NULL	HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin	-	no_errors
PGLYRP2	114770	genome.wustl.edu	37	19	15586523	15586523	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	19	15586523	15586523	G	A	SNP	PGLYRP2	NM_052890.3	human	genbank	58_37c	-1	validated	missense	c.958	p.R320W	0.912	NULL	HMMPfam_Amidase_2,HMMSmart_SM00644,superfamily_N-acetylmuramoyl-L-alanine amidase-like,HMMSmart_SM00701	-	no_errors
PIK3CG	5294	genome.wustl.edu	37	7	106523500	106523500	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	7	106523500	106523500	C	T	SNP	PIK3CG	NM_002649.2	human	genbank	58_37c	+1	reviewed	silent	c.2652	p.D884	0.571	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)	HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_PI3Ka,HMMSmart_SM00145,HMMPfam_PI3K_C2,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_Ubiquitin-like	-	no_errors
PNMAL1	55228	genome.wustl.edu	37	19	46973388	46973388	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	19	46973388	46973388	G	A	SNP	PNMAL1	NM_018215.3	human	genbank	58_37c	-1	validated	missense	c.905	p.A302V	0.000	NULL	NULL	-	no_errors
PRKCDBP	112464	genome.wustl.edu	37	11	6341507	6341507	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	6341507	6341507	A	T	SNP	PRKCDBP	NM_145040.2	human	genbank	58_37c	-1	reviewed	missense	c.200	p.L67Q	0.991	NULL	NULL	-	no_errors
QSER1	79832	genome.wustl.edu	37	11	32954676	32954676	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	32954676	32954676	T	C	SNP	QSER1	NM_001076786.1	human	genbank	58_37c	+1	provisional	silent	c.1485	p.S495	0.648	NULL	NULL	-	no_errors
RECQL5	9400	genome.wustl.edu	37	17	73654533	73654533	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	17	73654533	73654533	C	T	SNP	RECQL5	NM_004259.5	human	genbank	58_37c	-1	validated	missense	c.994	p.A332T	0.989	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Helicase_C,HMMSmart_SM00490,PatternScan_DEAH_ATP_HELICASE,HMMPfam_RecQ5,HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RIMBP2	23504	genome.wustl.edu	37	12	130935822	130935822	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	130935822	130935822	G	T	SNP	RIMBP2	NM_015347.4	human	genbank	58_37c	-1	validated	missense	c.371	p.P124H	0.022	NULL	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_SH3_2	-	no_errors
SCEL	8796	genome.wustl.edu	37	13	78182240	78182240	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	13	78182240	78182240	A	T	SNP	SCEL	NM_144777.2	human	genbank	58_37c	+1	validated	missense	c.1207	p.S403C	0.014	NULL	HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1	-	no_errors
SLC13A2	9058	genome.wustl.edu	37	17	26818553	26818553	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	17	26818553	26818553	G	A	SNP	SLC13A2	NM_003984.3	human	genbank	58_37c	+1	validated	missense	c.673	p.V225M	0.878	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors
SPON1	10418	genome.wustl.edu	37	11	14279316	14279316	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	11	14279316	14279316	G	C	SNP	SPON1	ENST00000310358	human	ensembl	58_37c	+1	known	missense	c.1361	p.S454T	1.000	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMPfam_Reeler,HMMPfam_Spond_N	-	no_errors
TBC1D22B	55633	genome.wustl.edu	37	6	37254787	37254787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	6	37254787	37254787	A	G	SNP	TBC1D22B	NM_017772.2	human	genbank	58_37c	+1	validated	missense	c.806	p.H269R	1.000	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p	-	no_errors
TNFRSF11A	8792	genome.wustl.edu	37	18	60017101	60017101	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	18	60017101	60017101	G	A	SNP	TNFRSF11A	NM_003839.2	human	genbank	58_37c	+1	reviewed	missense	c.214	p.G72S	1.000	HMMSmart_TNFR,superfamily_SSF57586	HMMPfam_TNFR_c6,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,superfamily_SSF57586	-	no_errors
TP53BP2	7159	genome.wustl.edu	37	1	223991057	223991057	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	1	223991057	223991057	C	G	SNP	TP53BP2	NM_001031685.2	human	genbank	58_37c	-1	reviewed	missense	c.747	p.E249D	1.000	NULL	HMMPfam_SH3_1,HMMSmart_SH3,HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK	-	no_errors
TRAFD1	10906	genome.wustl.edu	37	12	112578753	112578753	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	12	112578753	112578753	T	G	SNP	TRAFD1	NM_001143906.1	human	genbank	58_37c	+1	validated	missense	c.368	p.V123G	1.000	NULL	HMMSmart_ZnF_C2H2	-	no_errors
TRPC5	7224	genome.wustl.edu	37	X	111078326	111078326	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	111078326	111078326	C	A	SNP	TRPC5	NM_012471.2	human	genbank	58_37c	-1	reviewed	missense	c.1719	p.Q573H	1.000	HMMPfam_Ion_trans	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,HMMPfam_TRP_2,PatternScan_RIBOSOMAL_S2_1	-	no_errors
XIAP	331	genome.wustl.edu	37	X	123019797	123019797	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	X	123019797	123019797	C	A	SNP	XIAP	NM_001167.2	human	genbank	58_37c	+1	reviewed	silent	c.285	p.G95	0.834	HMMSmart_BIR,superfamily_SSF57924	HMMPfam_BIR,HMMSmart_BIR,PatternScan_BIR_REPEAT_1,HMMSmart_RING,PatternScan_ZF_RING_1,superfamily_SSF57924	-	no_errors
ZDBF2	57683	genome.wustl.edu	37	2	207171377	207171377	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	2	207171377	207171377	G	T	SNP	ZDBF2	NM_020923.1	human	genbank	58_37c	+1	validated	missense	c.2125	p.D709Y	0.962	NULL	HMMPfam_zf-DBF	-	no_errors
ZNF266	10781	genome.wustl.edu	37	19	9524420	9524420	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	7718c3f0-1c90-4940-bc30-ea4f417851bb	cca486f4-dbe7-4629-b5bc-bce1d97f9bfc	19	9524420	9524420	C	T	SNP	ZNF266	NM_006631.2	human	genbank	58_37c	-1	validated	missense	c.1181	p.R394H	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMSmart_KRAB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
