Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
CATSPER4	378807	genome.wustl.edu	37	1	26524495	26524495	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_198137.1	+1	validated	p.R202Q	1.000	51	0%	49	26.5%	-	-	probably_damaging(1)	tolerated(0.28)	deleterious(0.531)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
PDE4B	5142	genome.wustl.edu	37	1	66833737	66833737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001037341.1	+1	reviewed	p.D551N	1.000	38	0%	49	32.7%	-	-	probably_damaging(0.986)	tolerated(0.08)	deleterious(0.734)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
CDC14A	8556	genome.wustl.edu	37	1	100964704	100964704	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_033312.2	+1	reviewed	p.L547	0.997	27	0%	50	30%	-	-	-	-	-	NULL
KIAA1324	57535	genome.wustl.edu	37	1	109734081	109734081	+	Silent	SNP	C	C	G	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_020775.3	+1	validated	p.L511	1.000	92	0%	111	45.9%	-	-	-	-	-	superfamily_Growth factor receptor domain
CELSR2	1952	genome.wustl.edu	37	1	109814335	109814335	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001408.2	+1	reviewed	p.T2639	0.991	26	0%	16	50%	-	-	-	-	-	NULL
SMG7	9887	genome.wustl.edu	37	1	183485014	183485015	+	Frame_Shift_Del	DEL	AA	AA	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_173156.2	+1	validated	p.K23fs	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
ACP1	52	genome.wustl.edu	37	2	277454	277454	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NR_024080.1	+1	reviewed	NULL	0.183	11	0%	20	40%	-	-	-	-	-	-
ENSG00000247626	0	genome.wustl.edu	37	2	198572076	198572077	+	RNA	INS	-	-	TTC	rs34688524	byCluster;by1000genomes	TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	ENST00000499940	-1	novel	NULL	0.000:0.000	-	-	-	-	-	-	-	-	-	-
SUMO1	7341	genome.wustl.edu	37	2	203096448	203096448	+	Missense_Mutation	SNP	A	A	C	rs150201912	by1000genomes	TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	ENST00000409627	-1	known	p.L7R	1.000	4	0.000	8	0.750	-	-	unknown(0)	-	-	NULL
RBM15B	29890	genome.wustl.edu	37	3	51430822	51430824	+	In_Frame_Del	DEL	CCA	CCA	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_013286.3	+1	validated	p.H668in_frame_del	1.000:1.000:0.998	-	-	-	-	-	-	-	-	-	NULL
SLC9A10	285335	genome.wustl.edu	37	3	111996659	111996659	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_183061.1	-1	validated	p.L123I	0.042	30	0%	28	14.3%	-	-	probably_damaging(0.959)	tolerated(0.45)	neutral(0.415)	HMMPfam_Na_H_Exchanger
PLXNA1	5361	genome.wustl.edu	37	3	126741047	126741047	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_032242.3	+1	validated	p.N1365fs	0.192	-	-	-	-	-	-	-	-	-	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
C4orf33	132321	genome.wustl.edu	37	4	130023848	130023848	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001099783.1	+1	validated	p.R28K	0.001	67	0%	73	16.4%	-	-	benign(0)	tolerated(0.9)	-	NULL
NSA2	10412	genome.wustl.edu	37	5	74069756	74069756	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_014886.3	+1	provisional	p.I196L	1.000	35	0%	40	30%	-	-	benign(0.039)	deleterious(0.02)	neutral(0.385)	HMMPfam_Ribosomal_S8e
GTF3C6	112495	genome.wustl.edu	37	6	111288854	111288854	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_138408.3	+1	validated	p.Q169fs	0.011	-	-	-	-	-	-	-	-	-	NULL
POLM	27434	genome.wustl.edu	37	7	44118367	44118367	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_013284.2	-1	validated	p.R229P	0.000	41	0%	47	42.6%	-	-	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMSmart_POLXc,superfamily_DNApol_B_N_like
DMTF1	9988	genome.wustl.edu	37	7	86823183	86823183	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001142327.1	+1	reviewed	p.S598F	1.000	27	0%	23	30.4%	-	-	benign(0.011)	deleterious(0)	neutral(0.445)	NULL
ZNF746	155061	genome.wustl.edu	37	7	149174749	149174749	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_152557.4	-1	validated	p.A206	0.468	20	0%	17	52.9%	-	-	-	-	-	NULL
ZNF775	285971	genome.wustl.edu	37	7	150094994	150094994	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_173680.3	+1	validated	p.P475	0.917	5	0.000	5	0.800	-	-	-	-	-	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
NRG1	3084	genome.wustl.edu	37	8	32474383	32474383	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_013956.3	+1	reviewed	p.G162fs	1.000	-	-	-	-	-	-	-	-	-	NULL
EYA1	2138	genome.wustl.edu	37	8	72182017	72182017	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_000503.4	-1	reviewed	p.F336	1.000	70	0%	84	40.5%	-	-	-	-	-	HMMPfam_Hydrolase
COLEC10	10584	genome.wustl.edu	37	8	120079636	120079636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_006438.3	+1	reviewed	p.C39Y	1.000	63	0%	78	10.3%	-	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
RG9MTD3	158234	genome.wustl.edu	37	9	37762100	37762100	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_144964.2	+1	validated	p.T58A	0.000	18	0%	15	46.7%	-	-	possibly_damaging(0.484)	tolerated(0.06)	deleterious(0.483)	NULL
PIP5K1B	8395	genome.wustl.edu	37	9	71606100	71606100	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_003558.2	+1	validated	p.T516I	1.000	70	0%	57	24.6%	-	-	benign(0.009)	tolerated(0.2)	neutral(0.050)	NULL
COL27A1	85301	genome.wustl.edu	37	9	116930622	116930622	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_032888.2	+1	validated	p.D263N	0.006	17	0%	20	50%	-	-	probably_damaging(0.955)	tolerated(0.24)	neutral(0.436)	NULL
COL5A1	1289	genome.wustl.edu	37	9	137709665	137709665	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_000093.3	+1	reviewed	p.A1409fs	1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Collagen
GLT6D1	360203	genome.wustl.edu	37	9	138516299	138516299	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_182974.2	-1	provisional	p.A159T	0.000	16	0%	19	47.4%	-	-	benign(0)	tolerated(0.56)	neutral(0.006)	HMMPfam_Glyco_transf_6,superfamily_SSF53448
CDH23	64072	genome.wustl.edu	37	10	73553196	73553196	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_022124.5	+1	reviewed	p.R2171C	1.000	20	0%	23	39.1%	-	-	benign(0.006)	deleterious(0.02)	neutral(0.383)	HMMSmart_SM00112,superfamily_Cadherin-like
SLK	9748	genome.wustl.edu	37	10	105770578	105770578	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_014720.2	+1	provisional	p.I930T	0.916	29	0%	45	37.8%	-	-	benign(0.03)	tolerated(0.12)	neutral(0.262)	superfamily_Protein kinase-like (PK-like)
BRSK2	9024	genome.wustl.edu	37	11	1466584	1466584	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_003957.2	+1	validated	p.S291	0.867	6	0.000	7	0.857	-	-	-	-	-	superfamily_Kinase_like
DNHD1	144132	genome.wustl.edu	37	11	6578614	6578616	+	In_Frame_Del	DEL	GAG	GAG	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_144666.2	+1	provisional	p.E2700in_frame_del	0.006:0.004:0.000	-	-	-	-	-	-	-	-	-	NULL
HCAR3	8843	genome.wustl.edu	37	12	123201277	123201277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_006018.2	-1	validated	p.R3Q	0.000	44	0%	23	73.9%	-	-	benign(0.003)	tolerated(0.14)	neutral(0.249)	superfamily_Family A G protein-coupled receptor-like
TEX26	122046	genome.wustl.edu	37	13	31540372	31540372	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_152325.1	+1	predicted	p.K161N	0.002	38	0%	49	46.9%	-	-	probably_damaging(0.99)	tolerated(0.21)	deleterious(0.485)	NULL
TDRD3	81550	genome.wustl.edu	37	13	61103305	61103305	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_030794.2	+1	validated	p.W556L	1.000	18	0%	18	33.3%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00333,superfamily_Tudor/PWWP/MBT
DOCK9	23348	genome.wustl.edu	37	13	99567641	99567641	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001130049.1	-1	validated	p.I279	1.000	68	0%	103	16.5%	-	-	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
KLHL28	54813	genome.wustl.edu	37	14	45415030	45415030	+	Silent	SNP	G	G	C	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_017658.3	-1	validated	p.L34	1.000	24	0%	28	25%	-	-	-	-	-	superfamily_POZ domain,HMMPfam_BTB
HERC2	8924	genome.wustl.edu	37	15	28506067	28506067	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_004667.4	-1	reviewed	p.T725fs	0.888	-	-	-	-	-	-	-	-	-	superfamily_RCC1/BLIP-II
NEDD4	4734	genome.wustl.edu	37	15	56134138	56134138	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_198400.2	-1	validated	p.S958C	1.000	41	0%	42	14.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
ZNF774	342132	genome.wustl.edu	37	15	90903404	90903404	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001004309.2	+1	validated	p.G114V	0.000	26	0%	23	26.1%	-	-	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
CLDN9	9080	genome.wustl.edu	37	16	3063638	3063638	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_020982.3	+1	reviewed	p.L92Q	0.996	22	0%	23	65.2%	-	-	possibly_damaging(0.823)	deleterious(0.02)	deleterious(0.695)	HMMPfam_PMP22_Claudin
CLEC18A	348174	genome.wustl.edu	37	16	69996892	69996892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_182619.2	+1	validated	p.V409M	1.000	92	1.1%	103	31.1%	-	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1
FA2H	79152	genome.wustl.edu	37	16	74750273	74750273	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_024306.4	-1	reviewed	p.V337	0.998	33	0%	56	14.3%	-	-	-	-	-	HMMPfam_FA_hydroxylase
RTN4RL1	146760	genome.wustl.edu	37	17	1840681	1840681	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_178568.2	-1	validated	p.F145	0.000	19	0%	11	54.5%	-	-	-	-	-	HMMSmart_SM00369,superfamily_L domain-like
CACNB1	782	genome.wustl.edu	37	17	37331450	37331450	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_000723.3	-1	reviewed	p.R598H	1.000	24	0%	32	34.4%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TTLL6	284076	genome.wustl.edu	37	17	46876995	46876995	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001130918.1	-1	validated	p.D247N	1.000	68	0%	68	26.5%	-	-	benign(0.075)	tolerated(0.3)	neutral(0.034)	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
USP36	57602	genome.wustl.edu	37	17	76798549	76798554	+	In_Frame_Del	DEL	TTTTTC	TTTTTC	-	rs148052919	byCluster;by1000genomes	TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	TTTTTC	TTTTTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_025090.3	-1	validated	p.KK959in_frame_del	0.178:0.173:0.043:0.038:0.100:0.107	-	-	-	-	-	-	-	-	-	NULL
MYOM1	8736	genome.wustl.edu	37	18	3102527	3102527	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_003803.3	-1	reviewed	p.D1174Y	1.000	67	0%	61	32.8%	-	-	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
LOXHD1	125336	genome.wustl.edu	37	18	44102099	44102099	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_144612.6	-1	reviewed	p.A1406T	0.030	29	0%	39	53.8%	-	-	benign(0.017)	tolerated(0.68)	neutral(0.003)	superfamily_Lipase_LipOase
OR7D4	125958	genome.wustl.edu	37	19	9325265	9325265	+	Silent	SNP	C	C	G	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_001005191.1	-1	provisional	p.V83	0.011	36	0%	57	26.3%	-	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF440	126070	genome.wustl.edu	37	19	11942220	11942220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_152357.2	+1	validated	p.D77Y	0.001	63	0%	104	19.2%	-	-	benign(0.008)	tolerated(0.51)	neutral(0.009)	NULL
LSR	51599	genome.wustl.edu	37	19	35758275	35758276	+	In_Frame_Ins	INS	-	-	GGA	rs79703261		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_205834.2	+1	validated	p.520in_frame_insR	0.950:0.994	-	-	-	-	-	-	-	-	-	NULL
PTOV1	53635	genome.wustl.edu	37	19	50363365	50363365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	ENST00000221557	+1	known	p.T333M	1.000	16	0%	21	42.9%	-	-	probably_damaging(0.983)	-	-	NULL
PPP2R1A	5518	genome.wustl.edu	37	19	52715971	52715971	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_014225.5	+1	reviewed	p.P179R	1.000	15	0%	13	30.8%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HEAT,superfamily_ARM repeat
JAG1	182	genome.wustl.edu	37	20	10632263	10632264	+	Frame_Shift_Ins	INS	-	-	CACT	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_000214.2	-1	reviewed	p.C362fs	1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196
ZNF41	7592	genome.wustl.edu	37	X	47307646	47307646	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_007130.2	-1	reviewed	p.T508R	0.000	108	0%	91	45.1%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
RGAG1	57529	genome.wustl.edu	37	X	109697388	109697388	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_020769.2	+1	validated	p.D1181	0.006	72	0%	70	35.7%	-	-	-	-	-	NULL
ZBTB33	10009	genome.wustl.edu	37	X	119388102	119388102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K8-01A-11D-A14K-09	TCGA-B5-A0K8-10B-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	554b9439-7e11-43ec-8bc3-448c59100b9e	bf7e7f52-7089-43fe-aa23-0c2d24a44b53	NM_006777.3	+1	reviewed	p.P278T	1.000	41	0%	53	35.8%	-	-	benign(0.046)	tolerated(0.24)	neutral(0.040)	NULL
