Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
CNTLN	54875	genome.wustl.edu	37	9	17486986	17486986	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	17486986	17486986	G	A	SNP	CNTLN	NM_017738.2	human	genbank	58_37c	+1	validated	splice_site	c.4042-1	e25-1	1.000	-	-	-	no_errors
DCAF5	8816	genome.wustl.edu	37	14	69520662	69520662	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	14	69520662	69520662	T	A	SNP	DCAF5	NM_003861.2	human	genbank	58_37c	-1	validated	missense	c.2741	p.H914L	0.992	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
DCUN1D2	55208	genome.wustl.edu	37	13	114138226	114138226	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	13	114138226	114138226	G	A	SNP	DCUN1D2	NM_001014283.1	human	genbank	58_37c	-1	validated	missense	c.149	p.S50L	0.975	NULL	HMMPfam_DUF298,superfamily_UBA-like	-	no_errors
DDB1	1642	genome.wustl.edu	37	11	61093120	61093120	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	61093120	61093120	C	T	SNP	DDB1	NM_001923.3	human	genbank	58_37c	-1	validated	missense	c.725	p.G242D	1.000	NULL	HMMPfam_CPSF_A	-	no_errors
DMKN	93099	genome.wustl.edu	37	19	35999142	35999142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	19	35999142	35999142	C	T	SNP	DMKN	NM_001126056.1	human	genbank	58_37c	-1	reviewed	missense	c.1039	p.G347S	0.003	NULL	NULL	-	no_errors
ENSG00000245882	0	genome.wustl.edu	37	10	135116465	135116465	+	RNA	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	135116465	135116465	G	A	SNP	TUBGCP2	NM_006659.2	human	genbank	58_37c	-1	validated	5_prime_untranslated_region	c.-20	NULL	0.035	-	-	-	no_errors
ENSG00000247002	0	genome.wustl.edu	37	20	417612	417612	+	RNA	SNP	T	T	C	rs6052005	byCluster;by2Hit2Allele;by1000genomes	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	20	417612	417612	T	C	SNP	TBC1D20	ENST00000461188	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-417612	NULL	0.000	-	-	-	no_coding_region
EP400	57634	genome.wustl.edu	37	12	132498069	132498069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	132498069	132498069	C	T	SNP	EP400	NM_015409.3	human	genbank	58_37c	+1	validated	missense	c.3643	p.H1215Y	1.000	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540	HMMPfam_SNF2_N,HMMPfam_Helicase_C,HMMSmart_HELICc,HMMPfam_HSA,superfamily_Homeodomain_like,HMMSmart_HSA,HMMSmart_DEXDc,superfamily_SSF52540	-	no_errors
FAM113B	91523	genome.wustl.edu	37	12	47629963	47629963	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	47629963	47629963	T	A	SNP	FAM113B	NM_138371.1	human	genbank	58_37c	+1	predicted	missense	c.1117	p.F373I	0.023	NULL	superfamily_SGNH hydrolase	-	no_errors
FHAD1	114827	genome.wustl.edu	37	1	15708607	15708607	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	15708607	15708607	C	T	SNP	FHAD1	NM_052929.1	human	genbank	58_37c	+1	provisional	missense	c.4040	p.A1347V	0.999	NULL	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain	-	no_errors
FOLR4	0	genome.wustl.edu	37	11	94040778	94040788	+	Frame_Shift_Del	DEL	CTCTTCGCCAG	CTCTTCGCCAG	-	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	CTCTTCGCCAG	CTCTTCGCCAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	94040778	94040788	CTCTTCGCCAG	-	DEL	FOLR4	NM_001080486.1	human	genbank	58_37c	+1	provisional	frame_shift_del	c.652_662	p.F219fs	0.003:0.002:0.014:0.018:0.012:0.007:0.288:0.315:0.009:0.006:0.000	NULL	HMMPfam_Folate_rec	-	no_errors
GRHL2	79977	genome.wustl.edu	37	8	102570699	102570699	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	8	102570699	102570699	C	T	SNP	GRHL2	NM_024915.3	human	genbank	58_37c	+1	reviewed	nonsense	c.337	p.R113*	1.000	NULL	HMMPfam_CP2	-	no_errors
HSDL2	84263	genome.wustl.edu	37	9	115167969	115167969	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	9	115167969	115167969	G	C	SNP	HSDL2	NM_032303.3	human	genbank	58_37c	+1	provisional	missense	c.247	p.A83P	0.000	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_adh_short,PatternScan_ADH_SHORT,HMMPfam_SCP2,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Sterol carrier protein SCP	-	no_errors
LGI2	55203	genome.wustl.edu	37	4	25005661	25005662	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	4	25005661	25005662	-	A	INS	LGI2	NM_018176.3	human	genbank	58_37c	-1	validated	frame_shift_ins	c.1050_1049	p.S351fs	1.000:0.998	HMMPfam_EPTP	HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_EPTP,superfamily_L domain-like	-	no_errors
LGI2	55203	genome.wustl.edu	37	4	25005663	25005663	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	4	25005663	25005663	G	A	SNP	LGI2	NM_018176.3	human	genbank	58_37c	-1	validated	silent	c.1048	p.L350	0.488	HMMPfam_EPTP	HMMSmart_SM00082,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_EPTP,superfamily_L domain-like	-	no_errors
LSM11	134353	genome.wustl.edu	37	5	157178496	157178496	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	5	157178496	157178496	T	C	SNP	LSM11	NM_173491.2	human	genbank	58_37c	+1	provisional	missense	c.547	p.C183R	1.000	superfamily_Sm_like_riboprot	HMMPfam_LSM,superfamily_Sm_like_riboprot	-	no_errors
MIR410	0	genome.wustl.edu	37	14	101532265	101532265	+	RNA	SNP	T	T	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	14	101532265	101532265	T	A	SNP	MIR410	ENST00000362222	human	ensembl	58_37c	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
NCOR1	9611	genome.wustl.edu	37	17	15983302	15983302	+	Silent	SNP	T	T	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	17	15983302	15983302	T	A	SNP	NCOR1	NM_006311.2	human	genbank	58_37c	-1	reviewed	silent	c.3477	p.P1159	0.525	NULL	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding	-	no_errors
OR2C3	81472	genome.wustl.edu	37	1	247695646	247695646	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	247695646	247695646	G	A	SNP	OR2C3	NM_198074.4	human	genbank	58_37c	-1	validated	silent	c.168	p.L56	0.999	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4A15	81328	genome.wustl.edu	37	11	55136222	55136222	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	55136222	55136222	G	T	SNP	OR4A15	NM_001005275.1	human	genbank	58_37c	+1	provisional	missense	c.863	p.R288M	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
OR4D10	390197	genome.wustl.edu	37	11	59245446	59245446	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	11	59245446	59245446	C	T	SNP	OR4D10	NM_001004705.1	human	genbank	58_37c	+1	provisional	missense	c.544	p.H182Y	0.587	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
P2RY1	5028	genome.wustl.edu	37	3	152554206	152554206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	152554206	152554206	G	A	SNP	P2RY1	NM_002563.2	human	genbank	58_37c	+1	reviewed	missense	c.635	p.R212Q	0.999	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936074	178936074	+	Missense_Mutation	SNP	C	C	G	rs121913285	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	3	178936074	178936074	C	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1616	p.P539R	1.000	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
RARS	5917	genome.wustl.edu	37	5	167927622	167927622	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	5	167927622	167927622	G	C	SNP	RARS	NM_002887.3	human	genbank	58_37c	+1	reviewed	missense	c.849	p.E283D	0.969	HMMPfam_tRNA-synt_1d,superfamily_Nucleotidylyl transferase	PatternScan_AA_TRNA_LIGASE_I,HMMPfam_Arg_tRNA_synt_N,superfamily_Arginyl-tRNA synthetase (ArgRS) N-terminal 'additional' domain,HMMPfam_DALR_1,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_tRNA-synt_1d,superfamily_Nucleotidylyl transferase	-	no_errors
RHAG	6005	genome.wustl.edu	37	6	49580246	49580246	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	6	49580246	49580246	A	G	SNP	RHAG	NM_000324.2	human	genbank	58_37c	-1	reviewed	missense	c.809	p.V270A	1.000	HMMPfam_Ammonium_transp,superfamily_RH_like_transpt	HMMPfam_Ammonium_transp,superfamily_RH_like_transpt	-	no_errors
RNF41	10193	genome.wustl.edu	37	12	56604349	56604349	+	Missense_Mutation	SNP	G	G	A	rs138861137	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	12	56604349	56604349	G	A	SNP	RNF41	NM_005785.2	human	genbank	58_37c	-1	reviewed	missense	c.94	p.P32S	1.000	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box	HMMSmart_SM00184,superfamily_TRAF domain-like,HMMPfam_USP8_interact,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_RING/U-box	-	no_errors
RNLS	55328	genome.wustl.edu	37	10	90332770	90332772	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	90332770	90332772	TCT	-	DEL	RNLS	NM_001031709.2	human	genbank	58_37c	-1	validated	in_frame_del	c.416_414	p.RD138in_frame_delS	0.035:0.010:0.007	superfamily_FAD/NAD(P)-binding domain	HMMPfam_FAD_binding_3,superfamily_FAD/NAD(P)-binding domain	-	no_errors
RPP38	10557	genome.wustl.edu	37	10	15145342	15145342	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	15145342	15145342	G	A	SNP	RPP38	NM_001097590.1	human	genbank	58_37c	+1	validated	missense	c.29	p.R10Q	0.538	NULL	HMMPfam_Ribosomal_L7Ae,superfamily_SSF55315	-	no_errors
RYR2	6262	genome.wustl.edu	37	1	237608771	237608771	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	237608771	237608771	G	A	SNP	RYR2	NM_001035.2	human	genbank	58_37c	+1	reviewed	missense	c.1241	p.R414H	0.988	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
SERPINE3	0	genome.wustl.edu	37	13	51922387	51922387	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	13	51922387	51922387	C	A	SNP	SERPINE3	NM_001101320.1	human	genbank	58_37c	+1	validated	missense	c.739	p.L247M	0.996	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins	HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN,superfamily_Serpins	-	no_errors
SORCS3	22986	genome.wustl.edu	37	10	106974227	106974227	+	Silent	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	10	106974227	106974227	C	T	SNP	SORCS3	NM_014978.1	human	genbank	58_37c	+1	reviewed	silent	c.2403	p.C801	1.000	HMMSmart_VPS10	HMMPfam_PKD,superfamily_PKD,HMMSmart_VPS10,superfamily_SSF110296	-	no_errors
SPEN	23013	genome.wustl.edu	37	1	16257012	16257012	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	1	16257012	16257012	T	A	SNP	SPEN	NM_015001.2	human	genbank	58_37c	+1	reviewed	nonsense	c.4277	p.L1426*	1.000	NULL	HMMPfam_RRM_1,HMMSmart_RRM,HMMPfam_SPOC,superfamily_SPOC-like,superfamily_SSF54928	-	no_errors
TMEM151B	441151	genome.wustl.edu	37	6	44241139	44241139	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	6	44241139	44241139	C	T	SNP	TMEM151B	NM_001137560.1	human	genbank	58_37c	+1	validated	nonsense	c.472	p.Q158*	1.000	NULL	NULL	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179585182	179585182	+	Silent	SNP	G	G	A	rs185860746	by1000genomes	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	2	179585182	179585182	G	A	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	silent	c.19575	p.V6525	0.069	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
UBE2E3	10477	genome.wustl.edu	37	2	181925537	181925537	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0RO-01A-22D-A099-09	TCGA-B6-A0RO-10A-01D-A099-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	05e12ff8-023b-4ac1-b35d-f97b42e3da7a	87703b5d-774a-4a75-9bbf-cb58f58adcc4	2	181925537	181925537	C	T	SNP	UBE2E3	NM_006357.2	human	genbank	58_37c	+1	reviewed	missense	c.524	p.P175L	1.000	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like	HMMPfam_UQ_con,HMMSmart_SM00212,PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBC-like	-	no_errors
