Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
CCDC14	64770	genome.wustl.edu	37	3	123667564	123667564	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	3	123667564	123667564	G	A	SNP	CCDC14	NM_022757.4	human	genbank	58_37c	-1	validated	missense	c.679	p.P227S	0.040	NULL	PatternScan_COPPER_BLUE	-	no_errors
CCDC159	126075	genome.wustl.edu	37	19	11462767	11462768	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	19	11462767	11462768	-	A	INS	CCDC159	NM_001080503.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.525_526	p.N175fs	0.242:0.583	NULL	NULL	-	no_errors
ERO1L	30001	genome.wustl.edu	37	14	53145184	53145184	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	14	53145184	53145184	C	T	SNP	ERO1L	NM_014584.1	human	genbank	58_37c	-1	provisional	missense	c.325	p.V109I	1.000	HMMPfam_ERO1,superfamily_ERO1	HMMPfam_ERO1,superfamily_ERO1	-	no_errors
FAM166A	401565	genome.wustl.edu	37	9	140139614	140139618	+	Frame_Shift_Del	DEL	CGTCT	CGTCT	-	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	CGTCT	CGTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	9	140139614	140139618	CGTCT	-	DEL	FAM166A	NM_001001710.1	human	genbank	58_37c	-1	predicted	frame_shift_del	c.579_575	p.E192fs	0.600:0.949:0.965:0.970:0.962	NULL	HMMPfam_DUF2475	-	no_errors
FAM78A	286336	genome.wustl.edu	37	9	134136463	134136463	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	9	134136463	134136463	T	G	SNP	FAM78A	NM_033387.3	human	genbank	58_37c	-1	validated	missense	c.598	p.T200P	1.000	NULL	NULL	-	no_errors
FRG1	2483	genome.wustl.edu	37	4	190876224	190876224	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	4	190876224	190876224	T	G	SNP	FRG1	NM_004477.2	human	genbank	58_37c	+1	reviewed	missense	c.350	p.L117R	1.000	superfamily_Actin-crosslinking proteins,HMMPfam_FRG1	PatternScan_LIPOCALIN,superfamily_Actin-crosslinking proteins,HMMPfam_FRG1	-	no_errors
GSPT1	2935	genome.wustl.edu	37	16	11988808	11988809	+	Splice_Site	INS	-	-	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	16	11988808	11988809	-	A	INS	GSPT1	NM_002094.3	human	genbank	58_37c	-1	validated	splice_site_ins	c.698+2_698+1	e5+2	1.000:1.000	-	-	-	no_errors
GTPBP2	54676	genome.wustl.edu	37	6	43593250	43593250	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	6	43593250	43593250	C	G	SNP	GTPBP2	NM_019096.3	human	genbank	58_37c	-1	validated	missense	c.555	p.K185N	1.000	HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_GTP_EFTU,HMMPfam_GTP_EFTU_D3,HMMPfam_GTP_EFTU_D2,superfamily_Translation proteins,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HADHA	3030	genome.wustl.edu	37	2	26432729	26432729	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	2	26432729	26432729	T	C	SNP	HADHA	NM_000182.4	human	genbank	58_37c	-1	reviewed	silent	c.1005	p.E335	1.000	superfamily_ClpP/crotonase	HMMPfam_ECH,HMMPfam_3HCDH,HMMPfam_3HCDH_N,PatternScan_3HCDH,superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_ENOYL_COA_HYDRATASE,superfamily_ClpP/crotonase	-	no_errors
HELZ	9931	genome.wustl.edu	37	17	65145995	65145995	+	Silent	SNP	A	A	C	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	17	65145995	65145995	A	C	SNP	HELZ	NM_014877.3	human	genbank	58_37c	-1	validated	silent	c.2463	p.G821	1.000	superfamily_SSF52540	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMPfam_PAM2,superfamily_SSF52540,superfamily_SSF90229	-	no_errors
HERC6	55008	genome.wustl.edu	37	4	89304502	89304502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	4	89304502	89304502	G	A	SNP	HERC6	NM_017912.3	human	genbank	58_37c	+1	validated	missense	c.329	p.G110E	0.824	HMMPfam_RCC1,superfamily_RCC1/BLIP-II	HMMPfam_RCC1,PatternScan_RCC1_2,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,superfamily_RCC1/BLIP-II	-	no_errors
KCND1	3750	genome.wustl.edu	37	X	48826456	48826458	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	X	48826456	48826458	AGA	-	DEL	KCND1	NM_004979.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.223_221	p.F74in_frame_del	1.000:1.000:1.000	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain	HMMSmart_SM00225,HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
KCNJ15	3772	genome.wustl.edu	37	21	39671581	39671581	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	21	39671581	39671581	G	A	SNP	KCNJ15	NM_002243.3	human	genbank	58_37c	+1	reviewed	missense	c.398	p.R133H	1.000	HMMPfam_IRK,superfamily_SSF81324	HMMPfam_IRK,superfamily_Ig_E-set,superfamily_SSF81324	-	no_errors
KCNJ16	3773	genome.wustl.edu	37	17	68128759	68128759	+	Silent	SNP	G	G	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	17	68128759	68128759	G	A	SNP	KCNJ16	NM_018658.1	human	genbank	58_37c	+1	reviewed	silent	c.531	p.K177	1.000	HMMPfam_IRK,superfamily_Ig_E-set	HMMPfam_IRK,superfamily_Ig_E-set,superfamily_SSF81324	-	no_errors
KLRC1	3821	genome.wustl.edu	37	12	10600155	10600155	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	12	10600155	10600155	A	G	SNP	KLRC1	NM_002259.4	human	genbank	58_37c	-1	reviewed	missense	c.566	p.M189T	0.001	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151882645	151882646	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	7	151882645	151882646	-	A	INS	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.5080_5079	p.V1693fs	1.000:1.000	HMMPfam_HMG_box,HMMSmart_SM00398	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
NALCN	259232	genome.wustl.edu	37	13	101759935	101759935	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	13	101759935	101759935	C	G	SNP	NALCN	NM_052867.2	human	genbank	58_37c	-1	validated	missense	c.2482	p.E828Q	1.000	superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
NSUN5B	155400	genome.wustl.edu	37	7	75044928	75044928	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	7	75044928	75044928	G	T	SNP	NSUN5B	ENST00000427550	human	ensembl	58_37c	+1	known	missense	c.16	p.A6S	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
OR5J2	282775	genome.wustl.edu	37	11	55944758	55944758	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	11	55944758	55944758	C	T	SNP	OR5J2	NM_001005492.1	human	genbank	58_37c	+1	provisional	missense	c.665	p.A222V	0.000	HMMPfam_7tm_1,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321	-	no_errors
PHLDB2	90102	genome.wustl.edu	37	3	111632538	111632538	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	3	111632538	111632538	A	G	SNP	PHLDB2	NM_001134438.1	human	genbank	58_37c	+1	validated	missense	c.1708	p.I570V	0.999	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
PIWIL4	143689	genome.wustl.edu	37	11	94308183	94308183	+	Missense_Mutation	SNP	C	C	G	rs147845557	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	11	94308183	94308183	C	G	SNP	PIWIL4	NM_152431.2	human	genbank	58_37c	+1	validated	missense	c.185	p.S62C	0.973	NULL	HMMPfam_PAZ,HMMPfam_Piwi,superfamily_Ribonuclease H-like,superfamily_PAZ domain	-	no_errors
PTPRB	5787	genome.wustl.edu	37	12	70925884	70925884	+	Silent	SNP	T	T	C	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	12	70925884	70925884	T	C	SNP	PTPRB	NM_001109754.1	human	genbank	58_37c	-1	reviewed	silent	c.6435	p.K2145	0.972	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMPfam_Ricin_B_lectin,HMMSmart_SM00404,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Ricin B-like lectins,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
SERPIND1	3053	genome.wustl.edu	37	22	21138494	21138494	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	22	21138494	21138494	C	G	SNP	SERPIND1	NM_000185.3	human	genbank	58_37c	+1	reviewed	missense	c.1124	p.P375R	1.000	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins	HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN,superfamily_Serpins,PatternScan_TONB_DEPENDENT_REC_1	-	no_errors
SMAD9	4093	genome.wustl.edu	37	13	37453778	37453778	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	13	37453778	37453778	C	T	SNP	SMAD9	NM_001127217.2	human	genbank	58_37c	-1	reviewed	missense	c.49	p.A17T	1.000	superfamily_SMAD MH1 domain	HMMPfam_MH2,HMMSmart_SM00524,HMMPfam_MH1,HMMSmart_SM00523,superfamily_SMAD/FHA domain,superfamily_SMAD MH1 domain	-	no_errors
STK38L	23012	genome.wustl.edu	37	12	27470270	27470270	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	12	27470270	27470270	C	T	SNP	STK38L	NM_015000.3	human	genbank	58_37c	+1	validated	missense	c.839	p.A280V	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TK_X,HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C	-	no_errors
TPCN1	53373	genome.wustl.edu	37	12	113728784	113728784	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	12	113728784	113728784	A	T	SNP	TPCN1	NM_001143819.1	human	genbank	58_37c	+1	validated	missense	c.2156	p.N719I	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,PatternScan_LECTIN_LEGUME_BETA,superfamily_Voltage-gated potassium channels	-	no_errors
UBE2A	7319	genome.wustl.edu	37	X	118715485	118715485	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	C	C	C	-	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	X	118715485	118715485	C	-	DEL	UBE2A	NM_003336.2	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.167	p.T56fs	1.000	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like	HMMPfam_UQ_con,HMMSmart_SM00212,PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBC-like	-	no_errors
VPS13D	55187	genome.wustl.edu	37	1	12331106	12331106	+	Silent	SNP	A	A	G	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	1	12331106	12331106	A	G	SNP	VPS13D	NM_015378.2	human	genbank	58_37c	+1	reviewed	silent	c.2028	p.Q676	0.998	NULL	HMMPfam_UBA,superfamily_UBA-like,HMMPfam_DUF1162,HMMSmart_SM00165	-	no_errors
VPS54	51542	genome.wustl.edu	37	2	64148420	64148420	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	2	64148420	64148420	T	C	SNP	VPS54	NM_016516.2	human	genbank	58_37c	-1	reviewed	missense	c.1789	p.N597D	1.000	NULL	HMMPfam_Vps54	-	no_errors
VSIG8	391123	genome.wustl.edu	37	1	159827578	159827580	+	In_Frame_Del	DEL	TGA	TGA	-	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	TGA	TGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	1	159827578	159827580	TGA	-	DEL	VSIG8	NM_001013661.1	human	genbank	58_37c	-1	provisional	in_frame_del	c.609_607	p.S203in_frame_del	0.909:0.997:1.000	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
ZNF292	23036	genome.wustl.edu	37	6	87964453	87964456	+	Frame_Shift_Del	DEL	TATC	TATC	-	novel	unknown	TCGA-B6-A0WV-01A-11D-A10G-09	TCGA-B6-A0WV-10A-01D-A10G-09	TATC	TATC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	b92107c5-c46f-4606-b4e9-2dab55ca4e9c	ea0de699-16b8-468d-ab85-223eb3880566	6	87964453	87964456	TATC	-	DEL	ZNF292	NM_015021.1	human	genbank	58_37c	+1	validated	frame_shift_del	c.1106_1109	p.S370fs	1.000:0.995:1.000:1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
