Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ATG16L1	55054	genome.wustl.edu	37	2	234201936	234201936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	2	234201936	234201936	G	A	SNP	ATG16L1	NM_030803.6	human	genbank	58_37c	+1	validated	missense	c.1663	p.E555K	0.994	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_ATG16,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
BAZ2A	11176	genome.wustl.edu	37	12	56994194	56994216	+	Frame_Shift_Del	DEL	GATATCCTCCTGGGAGTCGGAGA	GATATCCTCCTGGGAGTCGGAGA	-	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	GATATCCTCCTGGGAGTCGGAGA	GATATCCTCCTGGGAGTCGGAGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	12	56994194	56994216	GATATCCTCCTGGGAGTCGGAGA	-	DEL	BAZ2A	NM_013449.3	human	genbank	58_37c	-1	validated	frame_shift_del	c.4689_4667	p.L1556fs	1.000:1.000:0.998:0.966:1.000:1.000:1.000:1.000:1.000:0.974:0.968:0.976:0.927:0.998:0.999:0.997:0.983:0.862:0.004:0.004:0.000:0.000:0.714	NULL	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_MBD,HMMSmart_SM00391,HMMSmart_SM00249,HMMPfam_DDT,superfamily_FYVE/PHD zinc finger,superfamily_DNA-binding domain,HMMPfam_AT_hook,HMMSmart_SM00384,PatternScan_BROMODOMAIN_1,HMMSmart_SM00571,HMMPfam_PHD	-	no_errors
C6orf27	80737	genome.wustl.edu	37	6	31741200	31741200	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	6	31741200	31741200	C	T	SNP	C6orf27	NM_025258.2	human	genbank	58_37c	-1	validated	missense	c.736	p.G246R	1.000	NULL	HMMSmart_VWA,superfamily_SSF53300	-	no_errors
CACHD1	57685	genome.wustl.edu	37	1	65120486	65120486	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	65120486	65120486	G	A	SNP	CACHD1	NM_020925.2	human	genbank	58_37c	+1	validated	missense	c.1629	p.M543I	1.000	"superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_VWA,HMMPfam_Cache_1,HMMPfam_VWA_N,superfamily_""Winged helix"" DNA-binding domain,superfamily_vWA-like"	-	no_errors
CASZ1	54897	genome.wustl.edu	37	1	10714168	10714168	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	10714168	10714168	T	C	SNP	CASZ1	NM_001079843.1	human	genbank	58_37c	-1	validated	missense	c.1946	p.Y649C	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
CBLB	868	genome.wustl.edu	37	3	105397361	105397361	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	3	105397361	105397361	G	A	SNP	CBLB	NM_170662.3	human	genbank	58_37c	-1	validated	missense	c.2483	p.A828V	1.000	NULL	HMMPfam_UBA,HMMSmart_SM00184,HMMPfam_Cbl_N,superfamily_N-terminal domain of cbl (N-cbl),HMMPfam_Cbl_N2,HMMPfam_Cbl_N3,HMMSmart_SM00165,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_EF-hand,superfamily_SH2 domain,superfamily_RING/U-box	-	no_errors
CDH1	999	genome.wustl.edu	37	16	68842414	68842414	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	16	68842414	68842414	C	-	DEL	CDH1	NM_004360.3	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.475	p.P159fs	1.000	HMMPfam_Cadherin,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_pro,superfamily_Cadherin-like	-	no_errors
COL17A1	1308	genome.wustl.edu	37	10	105801282	105801282	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	10	105801282	105801282	G	A	SNP	COL17A1	NM_000494.3	human	genbank	58_37c	-1	reviewed	nonsense	c.2566	p.Q856*	1.000	NULL	HMMPfam_Collagen	-	no_errors
EEF1D	1936	genome.wustl.edu	37	8	144662795	144662795	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	8	144662795	144662795	C	T	SNP	EEF1D	NM_001130053.1	human	genbank	58_37c	-1	reviewed	missense	c.1591	p.E531K	1.000	HMMPfam_EF-1_beta_acid	PatternScan_EF1BD_1,PatternScan_EF1BD_2,HMMPfam_EF1_GNE,superfamily_eEF-1beta-like,HMMPfam_EF-1_beta_acid	-	no_errors
ENSG00000238421	0	genome.wustl.edu	37	GL000192.1	545069	545069	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	GL000192.1	545069	545069	C	T	SNP	ENSG00000238421	ENST00000459549	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000238421	0	genome.wustl.edu	37	GL000192.1	545107	545107	+	RNA	SNP	T	T	C	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	GL000192.1	545107	545107	T	C	SNP	ENSG00000238421	ENST00000459549	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
ERBB2	2064	genome.wustl.edu	37	17	37881000	37881000	+	Missense_Mutation	SNP	G	G	C	rs121913471	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	17	37881000	37881000	G	C	SNP	ERBB2	NM_004448.2	human	genbank	58_37c	+1	reviewed	missense	c.2329	p.V777L	1.000	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	HMMPfam_Recep_L_domain,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_YLP,HMMPfam_Furin-like,HMMSmart_SM00261,PatternScan_PROTEIN_KINASE_TYR,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,PatternScan_EF_HAND_1,superfamily_L domain-like	-	no_errors
FBXO18	84893	genome.wustl.edu	37	10	5945053	5945053	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	10	5945053	5945053	G	A	SNP	FBXO18	NM_032807.3	human	genbank	58_37c	+1	reviewed	silent	c.225	p.V75	0.989	NULL	HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF52540,superfamily_SSF81383	-	no_errors
FSD1	79187	genome.wustl.edu	37	19	4311945	4311945	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	19	4311945	4311945	G	A	SNP	FSD1	NM_024333.2	human	genbank	58_37c	+1	reviewed	silent	c.597	p.V199	1.000	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	HMMSmart_BBC,HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors
GRID2IP	392862	genome.wustl.edu	37	7	6541690	6541690	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	7	6541690	6541690	C	T	SNP	GRID2IP	NM_001145118.1	human	genbank	58_37c	-1	validated	silent	c.3210	p.S1070	0.786	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ,HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd	-	no_errors
HECW1	23072	genome.wustl.edu	37	7	43484146	43484146	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	7	43484146	43484146	G	T	SNP	HECW1	NM_015052.3	human	genbank	58_37c	+1	validated	missense	c.1375	p.A459S	0.073	NULL	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-	no_errors
HIF3A	64344	genome.wustl.edu	37	19	46842838	46842838	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	19	46842838	46842838	G	A	SNP	HIF3A	NM_152795.2	human	genbank	58_37c	+1	reviewed	missense	c.1969	p.G657S	0.991	NULL	HMMSmart_SM00091,HMMSmart_SM00353,HMMSmart_SM00086,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_PAS_3,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
HIST2H2BE	8349	genome.wustl.edu	37	1	149858180	149858180	+	Missense_Mutation	SNP	G	G	A	rs141403958	byFrequency	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	149858180	149858180	G	A	SNP	HIST2H2BE	NM_003528.2	human	genbank	58_37c	-1	reviewed	missense	c.11	p.P4L	0.997	NULL	HMMSmart_SM00427,PatternScan_HISTONE_H2B,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors
IARS	3376	genome.wustl.edu	37	9	95027830	95027830	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	9	95027830	95027830	T	A	SNP	IARS	NM_002161.4	human	genbank	58_37c	-1	reviewed	silent	c.1437	p.V479	0.628	HMMPfam_tRNA-synt_1,superfamily_SSF52374	PatternScan_AA_TRNA_LIGASE_I,HMMPfam_tRNA-synt_1,superfamily_ValRS_IleRS_edit,superfamily_tRNAsyn_1a_bind,HMMPfam_Anticodon_1,superfamily_SSF52374	-	no_errors
KIAA1199	57214	genome.wustl.edu	37	15	81171141	81171141	+	Silent	SNP	C	C	T	rs149378911	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	15	81171141	81171141	C	T	SNP	KIAA1199	NM_018689.1	human	genbank	58_37c	+1	validated	silent	c.174	p.I58	0.052	HMMPfam_G8	HMMPfam_G8	-	no_errors
MAGEA12	4111	genome.wustl.edu	37	X	151899975	151899975	+	Silent	SNP	T	T	G	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	X	151899975	151899975	T	G	SNP	MAGEA12	NM_005367.5	human	genbank	58_37c	-1	reviewed	silent	c.826	p.R276	0.401	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MAN2A1	4124	genome.wustl.edu	37	5	109183450	109183450	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	5	109183450	109183450	C	T	SNP	MAN2A1	NM_002372.2	human	genbank	58_37c	+1	reviewed	silent	c.2935	p.L979	1.000	superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C	HMMPfam_Glyco_hydro_38,superfamily_Gal_mut_like,superfamily_Glyco_hydro/deAcase_b/a-brl,HMMPfam_Glyco_hydro_38C,HMMPfam_Alpha-mann_mid,superfamily_SSF88688	-	no_errors
MID1	4281	genome.wustl.edu	37	X	10534972	10534972	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	X	10534972	10534972	C	T	SNP	MID1	NM_000381.2	human	genbank	58_37c	-1	reviewed	missense	c.616	p.D206N	1.000	HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00184,HMMSmart_SM00502,HMMPfam_SPRY,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,PatternScan_ZF_RING_1,HMMSmart_SM00449,HMMPfam_zf-C3HC4,superfamily_B-box zinc-binding domain,superfamily_RING/U-box	-	no_errors
NCRNA00085	147650	genome.wustl.edu	37	19	52197329	52197330	+	RNA	INS	-	-	AG	rs66706248	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	19	52197329	52197330	-	AG	INS	NCRNA00085	NR_024330.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors
ODZ3	55714	genome.wustl.edu	37	4	183721107	183721107	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	4	183721107	183721107	G	A	SNP	ODZ3	NM_001080477.1	human	genbank	58_37c	+1	provisional	missense	c.7703	p.R2568H	1.000	NULL	HMMPfam_NHL,HMMSmart_EGF,HMMPfam_RHS_repeat,superfamily_CarboxypepD_reg,superfamily_ConA_like_lec_gl,HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_SSF101898,superfamily_SSF57196,superfamily_SSF63829	-	no_errors
OR4S2	219431	genome.wustl.edu	37	11	55418854	55418854	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	11	55418854	55418854	G	A	SNP	OR4S2	NM_001004059.2	human	genbank	58_37c	+1	validated	missense	c.475	p.A159T	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PCNT	5116	genome.wustl.edu	37	21	47836277	47836277	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	21	47836277	47836277	G	A	SNP	PCNT	NM_006031.5	human	genbank	58_37c	+1	reviewed	missense	c.6445	p.A2149T	0.002	NULL	HMMPfam_PACT_coil_coil	-	no_errors
PLEKHA9	51054	genome.wustl.edu	37	12	45567613	45567613	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	12	45567613	45567613	C	A	SNP	PLEKHA9	NM_015899.1	human	genbank	58_37c	-1	provisional	missense	c.536	p.C179F	0.313	NULL	HMMPfam_GLTP,superfamily_Glycolipid_transfer_prot	-	no_errors
PODN	127435	genome.wustl.edu	37	1	53537273	53537273	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	1	53537273	53537273	C	T	SNP	PODN	NM_153703.3	human	genbank	58_37c	+1	validated	silent	c.523	p.L175	1.000	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52047,superfamily_SSF52058	-	no_errors
PRMT10	90826	genome.wustl.edu	37	4	148575485	148575485	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	4	148575485	148575485	T	C	SNP	PRMT10	NM_138364.2	human	genbank	58_37c	-1	provisional	silent	c.1563	p.E521	0.899	NULL	superfamily_TPR-like,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
RIC3	79608	genome.wustl.edu	37	11	8161556	8161556	+	Silent	SNP	G	G	A	rs150133415	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	11	8161556	8161556	G	A	SNP	RIC3	NM_024557.3	human	genbank	58_37c	-1	validated	silent	c.309	p.Y103	1.000	NULL	NULL	-	no_errors
RUNX1	861	genome.wustl.edu	37	21	36252958	36252958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	21	36252958	36252958	C	T	SNP	RUNX1	NM_001754.4	human	genbank	58_37c	-1	reviewed	missense	c.404	p.G135D	1.000	superfamily_p53-like transcription factors,HMMPfam_Runt	superfamily_p53-like transcription factors,HMMPfam_Runt,HMMPfam_RunxI	-	no_errors
SCAP	22937	genome.wustl.edu	37	3	47467065	47467065	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	3	47467065	47467065	G	A	SNP	SCAP	NM_012235.2	human	genbank	58_37c	-1	reviewed	missense	c.947	p.A316V	1.000	superfamily_Multidrug efflux transporter AcrB transmembrane domain	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
STARD8	9754	genome.wustl.edu	37	X	67940160	67940160	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	X	67940160	67940160	C	T	SNP	STARD8	NM_001142503.2	human	genbank	58_37c	+1	reviewed	silent	c.1944	p.H648	0.914	NULL	HMMPfam_RhoGAP,HMMSmart_SM00324,HMMPfam_START,HMMSmart_SM00234,superfamily_GTPase activation domain GAP,superfamily_Bet v1-like	-	no_errors
TMEM132C	92293	genome.wustl.edu	37	12	128899678	128899678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	12	128899678	128899678	G	A	SNP	TMEM132C	NM_001136103.2	human	genbank	58_37c	+1	provisional	missense	c.151	p.A51T	0.025	NULL	NULL	-	no_errors
TRADD	8717	genome.wustl.edu	37	16	67190466	67190466	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	16	67190466	67190466	G	A	SNP	TRADD	NM_003789.3	human	genbank	58_37c	-1	reviewed	missense	c.98	p.A33V	0.032	superfamily_TRADD N-terminal domain	HMMPfam_Death,HMMSmart_SM00005,HMMPfam_TRADD_N,superfamily_TRADD N-terminal domain,superfamily_DEATH domain	-	no_errors
VPS35	55737	genome.wustl.edu	37	16	46695632	46695632	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	16	46695632	46695632	C	T	SNP	VPS35	NM_018206.4	human	genbank	58_37c	-1	reviewed	missense	c.2209	p.A737T	1.000	HMMPfam_Vps35	HMMPfam_Vps35	-	no_errors
YAP1	10413	genome.wustl.edu	37	11	102100570	102100570	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	11	102100570	102100570	C	T	SNP	YAP1	NM_001130145.1	human	genbank	58_37c	+1	reviewed	missense	c.1414	p.P472S	1.000	NULL	HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP	-	no_errors
YME1L1	10730	genome.wustl.edu	37	10	27436575	27436575	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	10	27436575	27436575	G	A	SNP	YME1L1	NM_139312.1	human	genbank	58_37c	-1	reviewed	missense	c.191	p.T64M	0.039	NULL	HMMPfam_Peptidase_M41,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF841	284371	genome.wustl.edu	37	19	52569331	52569331	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0C1-01B-11D-A12B-09	TCGA-BH-A0C1-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	adebc709-8059-43c3-ad0e-a102fa1536ff	5298995d-f21e-48f8-8696-0fb2e192693a	19	52569331	52569331	A	C	SNP	ZNF841	NM_001136499.1	human	genbank	58_37c	-1	validated	missense	c.1804	p.C602G	0.835	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,PatternScan_IG_MHC,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
