Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABL2	27	genome.wustl.edu	37	1	179078567	179078567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	1	179078567	179078567	C	T	SNP	ABL2	NM_007314.3	human	genbank	58_37c	-1	reviewed	missense	c.1835	p.R612K	1.000	NULL	HMMPfam_SH2,HMMSmart_SM00252,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like),HMMPfam_F_actin_bind,HMMSmart_SM00808,PatternScan_PROTEIN_KINASE_ATP,superfamily_SH2 domain	-	no_errors
AFG3L2	10939	genome.wustl.edu	37	18	12329635	12329635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	18	12329635	12329635	C	T	SNP	AFG3L2	NM_006796.1	human	genbank	58_37c	-1	reviewed	missense	c.2323	p.G775S	1.000	NULL	HMMPfam_Peptidase_M41,HMMSmart_AAA,HMMPfam_AAA,PatternScan_AAA,HMMPfam_FtsH_ext,superfamily_SSF52540	-	no_errors
C4orf35	85438	genome.wustl.edu	37	4	71200897	71200897	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	4	71200897	71200897	C	T	SNP	C4orf35	NM_033122.3	human	genbank	58_37c	+1	validated	silent	c.141	p.H47	0.095	NULL	NULL	-	no_errors
CCNF	899	genome.wustl.edu	37	16	2499388	2499388	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	16	2499388	2499388	A	C	SNP	CCNF	NM_001761.2	human	genbank	58_37c	+1	reviewed	missense	c.1324	p.T442P	1.000	HMMPfam_Cyclin_C,HMMSmart_CYCLIN,superfamily_Cyclin_like	HMMPfam_F-box,HMMSmart_FBOX,HMMPfam_Cyclin_C,HMMSmart_CYCLIN,HMMPfam_Cyclin_N,PatternScan_CYCLINS,superfamily_Cyclin_like,superfamily_SSF81383	-	no_errors
CIRH1A	84916	genome.wustl.edu	37	16	69184739	69184739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	16	69184739	69184739	C	T	SNP	CIRH1A	NM_032830.2	human	genbank	58_37c	+1	reviewed	missense	c.934	p.R312C	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
COL5A1	1289	genome.wustl.edu	37	9	137591855	137591855	+	Silent	SNP	G	G	A	rs145178917	by1000genomes	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	9	137591855	137591855	G	A	SNP	COL5A1	NM_000093.3	human	genbank	58_37c	+1	reviewed	silent	c.378	p.Q126	1.000	HMMSmart_LamG,HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	HMMPfam_COLFI,HMMSmart_COLFI,HMMSmart_LamG,HMMSmart_TSPN,HMMPfam_Collagen,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2	-	no_errors
DNASE1L3	1776	genome.wustl.edu	37	3	58190568	58190568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	3	58190568	58190568	C	T	SNP	DNASE1L3	NM_004944.2	human	genbank	58_37c	-1	reviewed	missense	c.361	p.D121N	0.983	HMMPfam_Exo_endo_phos,superfamily_DNase I-like,HMMSmart_SM00476	HMMPfam_Exo_endo_phos,superfamily_DNase I-like,HMMSmart_SM00476,PatternScan_DNASE_I_2,PatternScan_DNASE_I_1	-	no_errors
FAM47C	442444	genome.wustl.edu	37	X	37027222	37027222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	X	37027222	37027222	C	T	SNP	FAM47C	NM_001013736.2	human	genbank	58_37c	+1	validated	missense	c.739	p.R247C	0.090	NULL	NULL	-	no_errors
GALNT12	79695	genome.wustl.edu	37	9	101589095	101589095	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	9	101589095	101589095	C	T	SNP	GALNT12	NM_024642.3	human	genbank	58_37c	+1	validated	silent	c.603	p.R201	0.133	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
GATA3	2625	genome.wustl.edu	37	10	8115948	8115960	+	Frame_Shift_Del	DEL	CCACACCACCCCT	CCACACCACCCCT	-	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	CCACACCACCCCT	CCACACCACCCCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	10	8115948	8115960	CCACACCACCCCT	-	DEL	GATA3	NM_001002295.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1297_1309	p.H434fs	1.000:1.000:0.979:1.000:1.000:0.946:1.000:1.000:0.921:0.998:0.980:0.290:1.000	NULL	HMMPfam_GATA,HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
GYS1	2997	genome.wustl.edu	37	19	49472669	49472669	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	19	49472669	49472669	G	A	SNP	GYS1	NM_002103.4	human	genbank	58_37c	-1	reviewed	missense	c.2090	p.A697V	0.993	NULL	HMMPfam_Glycogen_syn,superfamily_SSF53756	-	no_errors
IFI35	3430	genome.wustl.edu	37	17	41164295	41164295	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	17	41164295	41164295	G	A	SNP	IFI35	NM_005533.3	human	genbank	58_37c	+1	validated	splice_site	c.120+1	e2+1	0.992	-	-	-	no_errors
IGHV3-30	0	genome.wustl.edu	37	14	106791268	106791268	+	Missense_Mutation	SNP	C	C	T	rs3764180	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	14	106791268	106791268	C	T	SNP	IGHV3-30	ENST00000390613	human	ensembl	58_37c	-1	known	missense	c.88	p.V30M	0.145	HMMPfam_V-set,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_stop_codon
IQCA1	79781	genome.wustl.edu	37	2	237308121	237308121	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	2	237308121	237308121	T	G	SNP	IQCA1	NM_024726.3	human	genbank	58_37c	-1	provisional	missense	c.1145	p.E382A	0.289	NULL	HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ITSN2	50618	genome.wustl.edu	37	2	24531572	24531572	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	2	24531572	24531572	G	A	SNP	ITSN2	NM_006277.2	human	genbank	58_37c	-1	reviewed	missense	c.707	p.S236L	1.000	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00027,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00054,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_SH3_2,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand,superfamily_PH domain-like	-	no_errors
MLL	4297	genome.wustl.edu	37	11	118363887	118363912	+	Frame_Shift_Del	DEL	AGCCTTTAGATCTAGAAGGAGTCAAG	AGCCTTTAGATCTAGAAGGAGTCAAG	-	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	AGCCTTTAGATCTAGAAGGAGTCAAG	AGCCTTTAGATCTAGAAGGAGTCAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	11	118363887	118363912	AGCCTTTAGATCTAGAAGGAGTCAAG	-	DEL	MLL	NM_005933.2	human	genbank	58_37c	+1	validated	frame_shift_del	c.5111_5136	p.P1705fs	1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.993:1.000:1.000:1.000:1.000:1.000:0.994:1.000:1.000:0.993:1.000:1.000:0.999:1.000:1.000:1.000	HMMSmart_SM00297,superfamily_Bromodomain	PatternScan_HMGI_Y,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00297,superfamily_Bromodomain,HMMSmart_SM00249,HMMPfam_zf-CXXC,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,PatternScan_RECR,HMMPfam_AT_hook,PatternScan_EF_HAND_1,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_SET domain	-	no_errors
MTUS2	0	genome.wustl.edu	37	13	29600570	29600570	+	Missense_Mutation	SNP	C	C	T	rs149038100	by1000genomes	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	13	29600570	29600570	C	T	SNP	MTUS2	NM_001033602.2	human	genbank	58_37c	+1	validated	missense	c.1765	p.R589C	0.000	NULL	NULL	-	no_errors
MUC5B	727897	genome.wustl.edu	37	11	1269750	1269750	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	11	1269750	1269750	C	-	DEL	MUC5B	NM_002458.1	human	genbank	58_37c	+1	validated	frame_shift_del	c.11649	p.P3884fs	0.000	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_VWD,HMMSmart_SM00216,superfamily_Serine proterase inhibitors,HMMSmart_SM00041,PatternScan_CTCK_1,HMMPfam_Cys_knot,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMPfam_C8,HMMPfam_TIL	-	no_errors
NEDD4L	23327	genome.wustl.edu	37	18	55990551	55990551	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	18	55990551	55990551	G	A	SNP	NEDD4L	NM_001144967.1	human	genbank	58_37c	+1	validated	silent	c.498	p.Q166	0.998	NULL	HMMPfam_C2,HMMSmart_SM00239,HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain,HMMPfam_WW,HMMSmart_SM00456,PatternScan_WW_DOMAIN_1,superfamily_WW domain,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
PELI2	57161	genome.wustl.edu	37	14	56757012	56757012	+	Silent	SNP	C	C	T	rs146968853	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	14	56757012	56757012	C	T	SNP	PELI2	NM_021255.2	human	genbank	58_37c	+1	validated	silent	c.534	p.P178	0.665	HMMPfam_Pellino	HMMPfam_Pellino	-	no_errors
PIM2	11040	genome.wustl.edu	37	X	48772372	48772372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	X	48772372	48772372	G	A	SNP	PIM2	NM_006875.3	human	genbank	58_37c	-1	reviewed	missense	c.520	p.R174C	0.121	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
RAB3GAP2	25782	genome.wustl.edu	37	1	220325077	220325077	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	1	220325077	220325077	G	C	SNP	RAB3GAP2	NM_012414.3	human	genbank	58_37c	-1	reviewed	silent	c.3897	p.V1299	0.956	NULL	NULL	-	no_errors
RAI1	10743	genome.wustl.edu	37	17	17697697	17697697	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	17	17697697	17697697	C	T	SNP	RAI1	NM_030665.3	human	genbank	58_37c	+1	reviewed	nonsense	c.1435	p.Q479*	1.000	NULL	HMMSmart_SM00249	-	no_errors
RICTOR	253260	genome.wustl.edu	37	5	38952359	38952359	+	Silent	SNP	T	T	C	rs111395471	by1000genomes	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	5	38952359	38952359	T	C	SNP	RICTOR	NM_152756.3	human	genbank	58_37c	-1	validated	silent	c.3066	p.L1022	0.123	superfamily_ARM repeat	HMMPfam_RasGEF_N,superfamily_ARM repeat	-	no_errors
SAMD10	140700	genome.wustl.edu	37	20	62607179	62607179	+	Missense_Mutation	SNP	G	A	A	rs113166910	byCluster;by1000genomes	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	20	62607179	62607179	G	A	SNP	SAMD10	NM_080621.4	human	genbank	58_37c	-1	validated	missense	c.452	p.A151V	1.000	HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_2	HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_2	-	no_errors
SOBP	55084	genome.wustl.edu	37	6	107955025	107955025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	6	107955025	107955025	C	T	SNP	SOBP	NM_018013.3	human	genbank	58_37c	+1	validated	missense	c.977	p.P326L	1.000	NULL	NULL	-	no_errors
SPACA1	81833	genome.wustl.edu	37	6	88769255	88769255	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	6	88769255	88769255	G	T	SNP	SPACA1	NM_030960.2	human	genbank	58_37c	+1	reviewed	missense	c.559	p.D187Y	0.764	NULL	NULL	-	no_errors
TMIGD2	126259	genome.wustl.edu	37	19	4292606	4292606	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	19	4292606	4292606	C	-	DEL	TMIGD2	NM_144615.2	human	genbank	58_37c	-1	validated	frame_shift_del	c.839	p.G280fs	0.002	NULL	HMMSmart_SM00409,superfamily_Immunoglobulin	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179499272	179499272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	2	179499272	179499272	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.34532	p.R11511Q	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
VANGL1	81839	genome.wustl.edu	37	1	116226619	116226619	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	1	116226619	116226619	G	A	SNP	VANGL1	NM_138959.2	human	genbank	58_37c	+1	reviewed	missense	c.1001	p.R334Q	0.848	HMMPfam_Strabismus	HMMPfam_Strabismus	-	no_errors
WBSCR22	114049	genome.wustl.edu	37	7	73107983	73107983	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	7	73107983	73107983	C	T	SNP	WBSCR22	NM_017528.2	human	genbank	58_37c	+1	reviewed	missense	c.626	p.S209L	0.768	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_Methyltransf_11,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
ZCCHC5	203430	genome.wustl.edu	37	X	77913883	77913883	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	X	77913883	77913883	A	C	SNP	ZCCHC5	NM_152694.2	human	genbank	58_37c	-1	reviewed	missense	c.35	p.L12R	0.999	NULL	HMMPfam_zf-CCHC,HMMSmart_ZnF_C2HC	-	no_errors
ZIC4	84107	genome.wustl.edu	37	3	147108756	147108756	+	Silent	SNP	C	T	T	rs17509456	byCluster;byFrequency;by1000genomes	TCGA-BH-A0HL-01A-11W-A050-09	TCGA-BH-A0HL-10A-11W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1fd1db26-79e0-4018-8548-8fd20a96c479	f3a79920-cdfb-4dc7-b10b-9c143fd3d274	3	147108756	147108756	C	T	SNP	ZIC4	ENST00000383075	human	ensembl	58_37c	-1	known	silent	c.966	p.S322	0.881	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
