Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ACRC	0	genome.wustl.edu	37	X	70832732	70832732	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	70832732	70832732	C	T	SNP	ACRC	NM_052957.4	human	genbank	58_37c	+1	validated	missense	c.1976	p.S659L	0.987	HMMSmart_SM00731,HMMPfam_SprT-like	HMMSmart_SM00731,HMMPfam_SprT-like	-	no_errors
ADCY4	0	genome.wustl.edu	37	14	24788604	24788604	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	14	24788604	24788604	G	C	SNP	ADCY4	NM_139247.2	human	genbank	58_37c	-1	reviewed	missense	c.2772	p.I924M	1.000	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_DUF1053,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ADCY5	0	genome.wustl.edu	37	3	123038594	123038594	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	3	123038594	123038594	C	T	SNP	ADCY5	NM_183357.1	human	genbank	58_37c	-1	validated	missense	c.2183	p.S728N	1.000	HMMPfam_DUF1053	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_DUF1053,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
AMPH	0	genome.wustl.edu	37	7	38431512	38431512	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	7	38431512	38431512	G	A	SNP	AMPH	NM_001635.2	human	genbank	58_37c	-1	reviewed	missense	c.1715	p.A572V	0.000	NULL	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_BAR,HMMSmart_SM00721	-	no_errors
AVPR2	0	genome.wustl.edu	37	X	153171699	153171699	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	153171699	153171699	C	T	SNP	AVPR2	NM_000054.4	human	genbank	58_37c	+1	reviewed	missense	c.739	p.R247C	0.001	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
C20orf177	0	genome.wustl.edu	37	20	58519040	58519040	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	20	58519040	58519040	G	T	SNP	C20orf177	NM_022106.1	human	genbank	58_37c	+1	predicted	missense	c.42	p.K14N	0.000	NULL	NULL	-	no_errors
CC2D1A	0	genome.wustl.edu	37	19	14031724	14031724	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	19	14031724	14031724	G	C	SNP	CC2D1A	NM_017721.4	human	genbank	58_37c	+1	reviewed	missense	c.1630	p.D544H	1.000	HMMSmart_SM00685	HMMPfam_C2,HMMSmart_SM00239,HMMSmart_SM00685,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
CCDC60	0	genome.wustl.edu	37	12	119937943	119937943	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	12	119937943	119937943	G	A	SNP	CCDC60	NM_178499.3	human	genbank	58_37c	+1	validated	silent	c.618	p.Q206	1.000	NULL	NULL	-	no_errors
CDH20	0	genome.wustl.edu	37	18	59221741	59221741	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	18	59221741	59221741	C	T	SNP	CDH20	NM_031891.2	human	genbank	58_37c	+1	reviewed	missense	c.2219	p.P740L	1.000	HMMPfam_Cadherin_C	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CDH9	0	genome.wustl.edu	37	5	26881405	26881405	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	5	26881405	26881405	G	A	SNP	CDH9	NM_016279.3	human	genbank	58_37c	-1	reviewed	missense	c.2210	p.T737M	0.999	HMMPfam_Cadherin_C	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CIT	0	genome.wustl.edu	37	12	120287989	120287989	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	12	120287989	120287989	G	T	SNP	CIT	NM_007174.1	human	genbank	58_37c	-1	validated	missense	c.505	p.H169N	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00133,HMMPfam_CNH,HMMSmart_SM00036,HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMSmart_SM00220,PatternScan_CPSASE_2,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_Pkinase_C,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
CRB1	0	genome.wustl.edu	37	1	197326056	197326056	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	197326056	197326056	C	A	SNP	CRB1	NM_201253.1	human	genbank	58_37c	+1	reviewed	missense	c.1084	p.Q362K	0.070	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181	PatternScan_ASX_HYDROXYL,HMMSmart_SM00282,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin	-	no_errors
CRIPAK	0	genome.wustl.edu	37	4	1389117	1389118	+	Frame_Shift_Ins	INS	-	-	AT	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	4	1389117	1389118	-	AT	INS	CRIPAK	NM_175918.3	human	genbank	58_37c	+1	validated	frame_shift_ins	c.818_819	p.R275fs	0.468:0.472	HMMSmart_PostSET	HMMSmart_PostSET	-	no_errors
CXorf57	0	genome.wustl.edu	37	X	105855472	105855472	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	105855472	105855472	G	A	SNP	CXorf57	NM_018015.5	human	genbank	58_37c	+1	validated	missense	c.162	p.M54I	0.000	NULL	superfamily_Nucleic acid-binding proteins	-	no_errors
DCDC5	0	genome.wustl.edu	37	11	30926690	30926690	+	Missense_Mutation	SNP	C	C	A	rs142867047	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	11	30926690	30926690	C	A	SNP	DCDC5	XM_002343054.1	human	genbank	58_37c	-1	model	missense	c.1828	p.A610S	0.997	NULL	HMMPfam_DCX,HMMSmart_SM00537,superfamily_Doublecortin (DC)	-	no_errors
DIAPH3	0	genome.wustl.edu	37	13	60348934	60348934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	13	60348934	60348934	C	T	SNP	DIAPH3	NM_001042517.1	human	genbank	58_37c	-1	validated	missense	c.3187	p.D1063N	1.000	HMMSmart_SM00498,HMMPfam_Drf_DAD	PatternScan_RNASE_PANCREATIC,HMMSmart_SM00498,HMMPfam_Drf_DAD,HMMPfam_Drf_FH3,HMMPfam_Drf_GBD,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)	-	no_errors
ENSG00000198763	0	genome.wustl.edu	37	MT	4991	4991	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	MT	4991	4991	G	A	SNP	ENSG00000198763	ENST00000361453	human	ensembl	58_37c	+1	known	silent	c.522	p.Q174	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q1,HMMPfam_NADH_dehy_S2_C	-	no_stop_codon:bad_bp_length_for_coding_region:mismatch_between_exon_seq_and_reference
ENSG00000198786	0	genome.wustl.edu	37	MT	13177	13177	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	MT	13177	13177	G	A	SNP	ENSG00000198786	ENST00000361567	human	ensembl	58_37c	+1	known	missense	c.841	p.G281S	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q1_N,HMMPfam_Oxidored_q1,HMMPfam_NADH5_C	-	mismatch_between_exon_seq_and_reference
ENSG00000228637	0	genome.wustl.edu	37	10	42394245	42394245	+	RNA	SNP	G	G	A	rs139535106	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	10	42394245	42394245	G	A	SNP	ENSG00000228637	ENST00000439345	human	ensembl	58_37c	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
EP300	0	genome.wustl.edu	37	22	41523564	41523564	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	22	41523564	41523564	C	T	SNP	EP300	NM_001429.3	human	genbank	58_37c	+1	reviewed	missense	c.980	p.A327V	0.998	superfamily_TAZ_finger	HMMPfam_zf-TAZ,HMMSmart_ZnF_TAZ,superfamily_TAZ_finger,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_KIX,superfamily_KIX,superfamily_Nuc_recept_coact,HMMPfam_DUF906,HMMPfam_DUF902,HMMPfam_Creb_binding,PatternScan_BROMODOMAIN_1	-	no_errors
FAM13A	0	genome.wustl.edu	37	4	89671660	89671660	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	4	89671660	89671660	G	A	SNP	FAM13A	NM_014883.2	human	genbank	58_37c	-1	validated	missense	c.1855	p.R619W	1.000	NULL	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP	-	no_errors
FAM157B	0	genome.wustl.edu	37	9	141107536	141107537	+	In_Frame_Ins	INS	-	-	GCA	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	9	141107536	141107537	-	GCA	INS	FAM157B	NM_001145249.1	human	genbank	58_37c	+1	inferred	in_frame_ins	c.218_219	p.77in_frame_insQ	0.033:0.036	NULL	NULL	-	no_errors
FAM157C	0	genome.wustl.edu	37	16	90168694	90168695	+	In_Frame_Ins	INS	-	-	GCA	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	16	90168694	90168695	-	GCA	INS	FAM157C	XM_001714162.2	human	genbank	58_37c	+1	model	in_frame_ins	c.215_216	p.76in_frame_insQ	0.004:0.011	NULL	NULL	-	no_errors
FAM83G	0	genome.wustl.edu	37	17	18881643	18881643	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	17	18881643	18881643	G	A	SNP	FAM83G	NM_001039999.2	human	genbank	58_37c	-1	validated	missense	c.1336	p.R446C	1.000	NULL	HMMPfam_DUF1669,superfamily_Phospholipase D/nuclease	-	no_errors
FLJ42393	0	genome.wustl.edu	37	3	187896883	187896884	+	RNA	DEL	AG	AG	-	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	3	187896883	187896884	AG	-	DEL	FLJ42393	NR_024413.1	human	genbank	58_37c	+1	validated	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
GIGYF2	0	genome.wustl.edu	37	2	233712227	233712229	+	In_Frame_Del	DEL	ACA	ACA	-	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	ACA	ACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	2	233712227	233712229	ACA	-	DEL	GIGYF2	NM_001103147.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3693_3695	p.Q1235in_frame_del	0.057:0.094:0.124	NULL	HMMPfam_GYF,HMMSmart_GYF,superfamily_GYF	-	no_errors
GOLM1	0	genome.wustl.edu	37	9	88694123	88694123	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	9	88694123	88694123	C	T	SNP	GOLM1	NM_016548.3	human	genbank	58_37c	-1	reviewed	missense	c.113	p.R38Q	1.000	NULL	NULL	-	no_errors
GRIN2B	0	genome.wustl.edu	37	12	13768551	13768551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	12	13768551	13768551	C	A	SNP	GRIN2B	NM_000834.3	human	genbank	58_37c	-1	reviewed	missense	c.1376	p.G459V	1.000	HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53850	HMMPfam_Lig_chan,HMMSmart_PBPe,HMMPfam_NMDAR2_C,HMMPfam_Lig_chan-Glu_bd,superfamily_SSF53822,superfamily_SSF53850	-	no_errors
HIPK3	0	genome.wustl.edu	37	11	33368958	33368958	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	11	33368958	33368958	C	G	SNP	HIPK3	NM_005734.3	human	genbank	58_37c	+1	validated	missense	c.2017	p.Q673E	1.000	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
HRNR	0	genome.wustl.edu	37	1	152187437	152187437	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	152187437	152187437	A	G	SNP	HRNR	NM_001009931.1	human	genbank	58_37c	-1	validated	missense	c.6668	p.V2223A	0.000	NULL	PatternScan_S100_CABP,HMMPfam_S_100,PatternScan_EF_HAND_1,HMMPfam_SVS_QK,superfamily_SSF47473	-	no_errors
HSPA1L	0	genome.wustl.edu	37	6	31778018	31778018	+	Missense_Mutation	SNP	C	C	G	rs139052456	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	6	31778018	31778018	C	G	SNP	HSPA1L	NM_005527.3	human	genbank	58_37c	-1	reviewed	missense	c.1732	p.E578Q	0.998	HMMPfam_HSP70,superfamily_SSF100934	HMMPfam_HSP70,PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934,superfamily_SSF53067	-	no_errors
HSPH1	0	genome.wustl.edu	37	13	31722195	31722195	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	13	31722195	31722195	G	A	SNP	HSPH1	NM_006644.2	human	genbank	58_37c	-1	validated	missense	c.1279	p.P427S	1.000	HMMPfam_HSP70,superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain	HMMPfam_HSP70,PatternScan_HSP70_3,superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain,superfamily_Heat shock protein 70kD (HSP70) C-terminal subdomain,superfamily_Actin-like ATPase domain	-	no_errors
ITGAX	0	genome.wustl.edu	37	16	31391336	31391336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	16	31391336	31391336	G	A	SNP	ITGAX	NM_000887.3	human	genbank	58_37c	+1	reviewed	missense	c.3010	p.A1004T	0.000	HMMPfam_Integrin_alpha2	HMMPfam_VWA,HMMSmart_VWA,HMMPfam_Integrin_alpha,HMMPfam_FG-GAP,HMMSmart_Int_alpha,HMMPfam_Integrin_alpha2,PatternScan_INTEGRIN_ALPHA,superfamily_SSF53300,superfamily_SSF69179,superfamily_SSF69318	-	no_errors
KCNB1	0	genome.wustl.edu	37	20	47990860	47990860	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	20	47990860	47990860	C	T	SNP	KCNB1	NM_004975.2	human	genbank	58_37c	-1	reviewed	missense	c.1237	p.V413I	1.000	superfamily_SSF81324	HMMSmart_BTB,HMMPfam_K_tetra,HMMPfam_Kv2channel,HMMPfam_Ion_trans,superfamily_BTB/POZ_fold,superfamily_SSF81324	-	no_errors
KIAA1239	0	genome.wustl.edu	37	4	37448786	37448786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	4	37448786	37448786	C	T	SNP	KIAA1239	NM_001144990.1	human	genbank	58_37c	+1	validated	missense	c.5176	p.R1726W	0.866	NULL	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1	-	no_errors
LCA5	0	genome.wustl.edu	37	6	80198927	80198927	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	6	80198927	80198927	G	A	SNP	LCA5	NM_001122769.2	human	genbank	58_37c	-1	reviewed	nonsense	c.1105	p.Q369*	0.008	NULL	NULL	-	no_errors
LOC441416	0	genome.wustl.edu	37	9	44175317	44175317	+	RNA	SNP	G	G	T	rs2933496	by2Hit2Allele	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	9	44175317	44175317	G	T	SNP	LOC441416	XR_016304.2	human	genbank	58_37c	-1	model	rna	NULL	NULL	0.001	-	-	-	pseudogene
LRP1B	0	genome.wustl.edu	37	2	141081533	141081533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	2	141081533	141081533	A	G	SNP	LRP1B	NM_018557.2	human	genbank	58_37c	-1	validated	missense	c.12443	p.V4148A	1.000	superfamily_SSF63825	HMMPfam_Ldl_recept_b,HMMSmart_LY,PatternScan_ASX_HYDROXYL,HMMPfam_NHL,HMMSmart_EGF_CA,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_CA,HMMPfam_EGF_2,PatternScan_EGF_CA,superfamily_SSF57196,superfamily_SSF63825	-	no_errors
LRRC1	0	genome.wustl.edu	37	6	53784398	53784398	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	6	53784398	53784398	C	T	SNP	LRRC1	NM_018214.4	human	genbank	58_37c	+1	validated	silent	c.1209	p.D403	0.998	NULL	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like	-	no_errors
LUM	0	genome.wustl.edu	37	12	91502039	91502039	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	12	91502039	91502039	C	T	SNP	LUM	NM_002345.3	human	genbank	58_37c	-1	reviewed	missense	c.718	p.E240K	1.000	HMMPfam_LRR_1,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,HMMSmart_SM00365,superfamily_L domain-like	-	no_errors
MAP3K4	0	genome.wustl.edu	37	6	161519351	161519353	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	6	161519351	161519353	CTG	-	DEL	MAP3K4	NM_005922.2	human	genbank	58_37c	+1	reviewed	in_frame_del	c.3566_3568	p.A1193in_frame_del	0.857:0.937:0.950	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MAPK4	0	genome.wustl.edu	37	18	48255548	48255548	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	18	48255548	48255548	C	T	SNP	MAPK4	NM_002747.3	human	genbank	58_37c	+1	reviewed	missense	c.1088	p.S363L	0.994	NULL	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
MARK1	0	genome.wustl.edu	37	1	220791767	220791767	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	220791767	220791767	C	T	SNP	MARK1	NM_018650.3	human	genbank	58_37c	+1	validated	missense	c.668	p.A223V	1.000	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMPfam_UBA,HMMSmart_SM00219,HMMPfam_KA1,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00165,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Kinase associated domain 1 KA1	-	no_errors
MTO1	0	genome.wustl.edu	37	6	74171766	74171766	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	6	74171766	74171766	G	T	SNP	MTO1	NM_001123226.1	human	genbank	58_37c	+1	reviewed	silent	c.189	p.L63	1.000	HMMPfam_GIDA,superfamily_FAD/NAD(P)-binding domain	HMMPfam_GIDA,PatternScan_GIDA_1,superfamily_FAD/NAD(P)-binding domain	-	no_errors
MUC4	0	genome.wustl.edu	37	3	195505836	195505836	+	Missense_Mutation	SNP	G	G	C	rs78985720	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	3	195505836	195505836	G	C	SNP	MUC4	NM_018406.5	human	genbank	58_37c	-1	reviewed	missense	c.12231	p.H4077Q	0.981	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
NHS	0	genome.wustl.edu	37	X	17744275	17744275	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	17744275	17744275	G	C	SNP	NHS	NM_198270.2	human	genbank	58_37c	+1	reviewed	silent	c.1986	p.V662	0.627	NULL	NULL	-	no_errors
NPHP4	0	genome.wustl.edu	37	1	5927909	5927909	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	5927909	5927909	C	G	SNP	NPHP4	NM_015102.2	human	genbank	58_37c	-1	reviewed	silent	c.3363	p.L1121	0.978	NULL	NULL	-	no_errors
NUDT11	0	genome.wustl.edu	37	X	51239296	51239309	+	Frame_Shift_Del	DEL	TCCTCGAGGCAGCC	TCCTCGAGGCAGCC	-	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	TCCTCGAGGCAGCC	TCCTCGAGGCAGCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	51239296	51239309	TCCTCGAGGCAGCC	-	DEL	NUDT11	ENST00000375992	human	ensembl	58_37c	-1	known	frame_shift_del	c.1	p.M1fs	0.928	NULL	HMMPfam_NUDIX,superfamily_NUDIX_hydrolase,PatternScan_NUDIX	-	no_errors
ONECUT3	0	genome.wustl.edu	37	19	1754710	1754710	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	19	1754710	1754710	G	A	SNP	ONECUT3	NM_001080488.1	human	genbank	58_37c	+1	provisional	missense	c.1049	p.C350Y	1.000	HMMPfam_CUT	HMMPfam_Homeobox,HMMSmart_HOX,HMMPfam_CUT,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
OR2G6	0	genome.wustl.edu	37	1	248685642	248685642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	248685642	248685642	C	T	SNP	OR2G6	NM_001013355.1	human	genbank	58_37c	+1	validated	missense	c.695	p.A232V	0.000	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
PCSK7	0	genome.wustl.edu	37	11	117097898	117097898	+	Silent	SNP	G	G	A	rs138324399	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	11	117097898	117097898	G	A	SNP	PCSK7	NM_004716.2	human	genbank	58_37c	-1	reviewed	silent	c.744	p.G248	0.730	HMMPfam_Peptidase_S8,superfamily_Pept_S8_S53	HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Pept_S8_S53,HMMPfam_P_proprotein,superfamily_Gal_bind_like	-	no_errors
PTPN21	0	genome.wustl.edu	37	14	88962792	88962792	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	14	88962792	88962792	C	T	SNP	PTPN21	NM_007039.3	human	genbank	58_37c	-1	reviewed	silent	c.897	p.A299	0.121	HMMPfam_FERM_C,superfamily_PH domain-like	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,HMMPfam_FERM_N,HMMPfam_FERM_C,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,superfamily_Ubiquitin-like	-	no_errors
RBM12	0	genome.wustl.edu	37	20	34242060	34242060	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	20	34242060	34242060	C	T	SNP	RBM12	NM_006047.4	human	genbank	58_37c	-1	reviewed	missense	c.1185	p.M395I	0.999	superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
RCAN3	0	genome.wustl.edu	37	1	24857756	24857756	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	24857756	24857756	C	T	SNP	RCAN3	NM_013441.2	human	genbank	58_37c	+1	validated	nonsense	c.244	p.Q82*	1.000	HMMPfam_Calcipressin	HMMPfam_Calcipressin	-	no_errors
RHO	0	genome.wustl.edu	37	3	129251571	129251571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	3	129251571	129251571	G	A	SNP	RHO	NM_000539.3	human	genbank	58_37c	+1	reviewed	missense	c.892	p.A298T	0.150	HMMPfam_7tm_1,PatternScan_OPSIN,superfamily_SSF81321	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN,HMMPfam_Rhodopsin_N,superfamily_SSF81321	-	no_errors
RTL1	0	genome.wustl.edu	37	14	101349520	101349520	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	14	101349520	101349520	G	A	SNP	RTL1	NM_001134888.2	human	genbank	58_37c	-1	reviewed	missense	c.1606	p.R536C	0.988	NULL	HMMPfam_Retrotrans_gag,superfamily_Acid proteases,superfamily_DNA/RNA polymerases	-	no_errors
SCMH1	0	genome.wustl.edu	37	1	41512122	41512122	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	41512122	41512122	G	C	SNP	SCMH1	NM_001031694.2	human	genbank	58_37c	-1	validated	silent	c.1425	p.L475	0.388	NULL	HMMPfam_SAM_1,HMMSmart_SM00454,HMMPfam_MBT,HMMSmart_SM00561,superfamily_SAM/Pointed domain,superfamily_Tudor/PWWP/MBT	-	no_errors
SDC2	0	genome.wustl.edu	37	8	97620629	97620629	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	8	97620629	97620629	G	A	SNP	SDC2	NM_002998.3	human	genbank	58_37c	+1	reviewed	missense	c.373	p.E125K	0.653	HMMPfam_Syndecan	HMMPfam_Syndecan,PatternScan_SYNDECAN,HMMSmart_SM00294	-	no_errors
SF3A1	0	genome.wustl.edu	37	22	30733776	30733776	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	22	30733776	30733776	C	T	SNP	SF3A1	ENST00000446990	human	ensembl	58_37c	-1	known	missense	c.190	p.A64T	0.043	NULL	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
SF4	0	genome.wustl.edu	37	19	19407828	19407828	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	19	19407828	19407828	C	A	SNP	SF4	NM_172231.2	human	genbank	58_37c	-1	validated	missense	c.1213	p.D405Y	0.974	NULL	HMMPfam_Surp,HMMSmart_SM00648,HMMPfam_G-patch,HMMSmart_SM00443,superfamily_Surp module (SWAP domain Pfam 01805)	-	no_errors
ST3GAL3	0	genome.wustl.edu	37	1	44363942	44363942	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	44363942	44363942	G	C	SNP	ST3GAL3	NM_174963.2	human	genbank	58_37c	+1	reviewed	missense	c.640	p.E214Q	1.000	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
TBX22	0	genome.wustl.edu	37	X	79278719	79278719	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	79278719	79278719	G	T	SNP	TBX22	NM_001109878.1	human	genbank	58_37c	+1	reviewed	missense	c.336	p.M112I	1.000	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,PatternScan_TBOX_1	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,PatternScan_TBOX_2,PatternScan_TBOX_1	-	no_errors
THSD7B	0	genome.wustl.edu	37	2	138208561	138208561	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	2	138208561	138208561	C	T	SNP	THSD7B	NM_001080427.1	human	genbank	58_37c	+1	provisional	nonsense	c.3013	p.R1005*	1.000	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	-	no_errors
TMCO3	0	genome.wustl.edu	37	13	114150035	114150035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	13	114150035	114150035	C	T	SNP	TMCO3	NM_017905.4	human	genbank	58_37c	+1	validated	missense	c.139	p.R47W	0.016	NULL	HMMPfam_Na_H_Exchanger	-	no_errors
TP53	0	genome.wustl.edu	37	17	7578431	7578431	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	17	7578431	7578431	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.499	p.Q167*	0.998	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRPC6	0	genome.wustl.edu	37	11	101359736	101359736	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	11	101359736	101359736	C	T	SNP	TRPC6	NM_004621.5	human	genbank	58_37c	-1	reviewed	missense	c.1225	p.V409M	1.000	NULL	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ion_trans,HMMPfam_TRP_2	-	no_errors
TRPM1	0	genome.wustl.edu	37	15	31334372	31334372	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	15	31334372	31334372	G	A	SNP	TRPM1	NM_002420.4	human	genbank	58_37c	-1	reviewed	silent	c.1803	p.D601	0.903	NULL	HMMPfam_Ion_trans	-	no_errors
TTN	0	genome.wustl.edu	37	2	179594238	179594238	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	2	179594238	179594238	G	A	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	silent	c.14913	p.D4971	0.743	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TUBB4Q	0	genome.wustl.edu	37	4	190904398	190904398	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	4	190904398	190904398	G	A	SNP	TUBB4Q	NM_020040.3	human	genbank	58_37c	-1	validated	silent	c.585	p.N195	1.000	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like	HMMPfam_Tubulin,superfamily_Tubulin C-terminal domain-like,PatternScan_TUBULIN,HMMPfam_Tubulin_C,superfamily_Tubulin nucleotide-binding domain-like	-	no_start_codon
TUBB6	0	genome.wustl.edu	37	18	12325960	12325960	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	18	12325960	12325960	G	A	SNP	TUBB6	NM_032525.1	human	genbank	58_37c	+1	provisional	missense	c.1172	p.R391H	1.000	superfamily_Tub_FtsZ_C	HMMPfam_Tubulin,superfamily_Tub_FtsZ_C,PatternScan_TUBULIN_B_AUTOREG,PatternScan_TUBULIN,HMMPfam_Tubulin_C,superfamily_Tubulin_FtsZ	-	no_errors
USP9X	0	genome.wustl.edu	37	X	41012240	41012240	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	X	41012240	41012240	C	T	SNP	USP9X	NM_001039590.2	human	genbank	58_37c	+1	reviewed	silent	c.1803	p.D601	0.984	NULL	HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,superfamily_Cysteine proteinases	-	no_errors
VAV3	0	genome.wustl.edu	37	1	108507315	108507317	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	1	108507315	108507317	CTC	-	DEL	VAV3	NM_006113.4	human	genbank	58_37c	-1	reviewed	in_frame_del	c.177_175	p.E59in_frame_del	1.000:1.000:1.000	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_SH2,HMMSmart_SM00252,PatternScan_DH_1,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_SH3_2,superfamily_Calponin-homology domain CH-domain,superfamily_PH domain-like,superfamily_SH2 domain,superfamily_Cysteine-rich domain	-	no_errors
ZBTB2	0	genome.wustl.edu	37	6	151687962	151687962	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	6	151687962	151687962	A	T	SNP	ZBTB2	NM_020861.1	human	genbank	58_37c	-1	provisional	missense	c.239	p.M80K	1.000	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB	HMMSmart_SM00225,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZEB1	0	genome.wustl.edu	37	10	31809597	31809597	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	10	31809597	31809597	A	G	SNP	ZEB1	NM_030751.5	human	genbank	58_37c	+1	reviewed	missense	c.1334	p.N445S	0.287	NULL	HMMSmart_HOX,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,PatternScan_HOMEOBOX_1,superfamily_SSF57667	-	no_errors
ZNF423	0	genome.wustl.edu	37	16	49669753	49669753	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A1XZ-01A-11D-A14K-09	TCGA-D8-A1XZ-10A-01D-A14K-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	381a9211-1f2b-4c14-895b-ee7fb6eb8c7f	1f6f5abe-614f-4f57-930c-e0ea2384cde6	16	49669753	49669753	C	T	SNP	ZNF423	NM_015069.2	human	genbank	58_37c	-1	reviewed	missense	c.3310	p.V1104M	0.981	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
