Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
C6orf118	168090	genome.wustl.edu	37	6	165715615	165715615	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	6	165715615	165715615	G	T	SNP	C6orf118	NM_144980.3	human	genbank	58_37c	-1	validated	missense	c.196	p.P66T	0.953	NULL	NULL	-	no_errors
CASP8	841	genome.wustl.edu	37	2	202149683	202149683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	2	202149683	202149683	C	T	SNP	CASP8	NM_001080125.1	human	genbank	58_37c	+1	reviewed	missense	c.1124	p.S375F	0.897	HMMPfam_Peptidase_C14,HMMSmart_SM00115,PatternScan_CASPASE_HIS,superfamily_Caspase-like	HMMPfam_DED,HMMSmart_SM00031,superfamily_DEATH domain,HMMPfam_Peptidase_C14,HMMSmart_SM00115,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS,superfamily_Caspase-like	-	no_errors
CHD4	1108	genome.wustl.edu	37	12	6690307	6690307	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	12	6690307	6690307	A	G	SNP	CHD4	NM_001273.2	human	genbank	58_37c	-1	reviewed	silent	c.4812	p.D1604	0.677	NULL	HMMPfam_SNF2_N,HMMPfam_Chromo,HMMSmart_SM00298,PatternScan_CHROMO_1,HMMPfam_Helicase_C,HMMSmart_SM00490,HMMSmart_SM00249,PatternScan_DEAH_ATP_HELICASE,HMMPfam_DUF1086,HMMPfam_DUF1087,superfamily_FYVE/PHD zinc finger,HMMPfam_CHDCT2,HMMPfam_CHDNT,HMMSmart_SM00487,superfamily_Chromo domain-like,PatternScan_ZF_PHD_1,HMMPfam_PHD,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DHCR24	1718	genome.wustl.edu	37	1	55331007	55331007	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	1	55331007	55331007	C	T	SNP	DHCR24	NM_014762.3	human	genbank	58_37c	-1	reviewed	missense	c.989	p.R330H	1.000	NULL	HMMPfam_FAD_binding_4,superfamily_FAD-binding_2	-	no_errors
LINGO1	84894	genome.wustl.edu	37	15	77907402	77907402	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	15	77907402	77907402	C	T	SNP	LINGO1	NM_032808.5	human	genbank	58_37c	-1	validated	missense	c.847	p.V283I	0.996	HMMPfam_LRR_1,superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin,superfamily_L domain-like	-	no_errors
PDE4A	5141	genome.wustl.edu	37	19	10570300	10570300	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	19	10570300	10570300	C	G	SNP	PDE4A	NM_001111307.1	human	genbank	58_37c	+1	validated	missense	c.1230	p.I410M	1.000	superfamily_HD-domain/PDEase-like	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like	-	no_errors
PHF21B	112885	genome.wustl.edu	37	22	45279150	45279150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	22	45279150	45279150	C	T	SNP	PHF21B	NM_138415.3	human	genbank	58_37c	-1	validated	missense	c.1412	p.R471H	1.000	NULL	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD	-	no_errors
RYR2	6262	genome.wustl.edu	37	1	237796915	237796915	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	1	237796915	237796915	G	A	SNP	RYR2	NM_001035.2	human	genbank	58_37c	+1	reviewed	missense	c.6593	p.R2198H	1.000	HMMPfam_RYDR_ITPR	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7574003	7574003	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	17	7574003	7574003	G	A	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	nonsense	c.1024	p.R342*	0.307	HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
ZNF618	114991	genome.wustl.edu	37	9	116811102	116811102	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A1B6-01A-31D-A12Q-09	TCGA-E2-A1B6-10A-01D-A12Q-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	Capture	Illumina_Capture_gDNA	1	dbGAP	Illumina GAIIx	1aaf88fc-f7cb-4239-a420-224352194160	409d90e2-1252-4a42-95d6-9625033b2c8f	9	116811102	116811102	G	T	SNP	ZNF618	NM_133374.2	human	genbank	58_37c	+1	validated	missense	c.1241	p.G414V	1.000	NULL	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_hATC,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
