Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2ML1	144568	broad.mit.edu	37	12	9005036	9005036	+	Intron	SNP	C	A	A	rs138983779	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2M	2	broad.mit.edu	37	12	9256930	9256930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A4GNT	51146	broad.mit.edu	37	3	137850009	137850009	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA11P	79963	broad.mit.edu	37	4	421592	421592	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48315597	48315597	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139905706	139905706	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94466731	94466731	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67103890	67103890	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB10	23456	broad.mit.edu	37	1	229657241	229657241	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20685795	20685795	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20691247	20691247	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20721145	20721145	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48117856	48117856	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16162136	16162136	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101560336	101560336	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21971084	21971084	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22012543	22012543	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF3	55324	broad.mit.edu	37	3	183907380	183907380	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148631777	148631778	+	Intron	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN2	41	broad.mit.edu	37	12	50453796	50453796	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN5	51802	broad.mit.edu	37	4	156758099	156758099	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44071763	44071763	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44076894	44076894	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACN9	57001	broad.mit.edu	37	7	96747046	96747046	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX1	51	broad.mit.edu	37	17	73974831	73974831	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70817761	70817761	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSF3	197322	broad.mit.edu	37	16	89212551	89212551	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20471317	20471317	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20491921	20491921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20554314	20554314	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20430531	20430531	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20451364	20451364	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTC1	70	broad.mit.edu	37	15	35084280	35084280	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236883600	236883600	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN4	81	broad.mit.edu	37	19	39214592	39214592	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1B	10120	broad.mit.edu	37	2	98273826	98273826	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT2	140625	broad.mit.edu	37	1	2938660	2938660	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1B	91	broad.mit.edu	37	12	52369262	52369262	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127782644	127782644	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156917529	156917529	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156964958	156964958	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM21P1	145241	broad.mit.edu	37	14	70713178	70713178	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39646227	39646227	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106667683	106667683	+	RNA	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106721489	106721489	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725530	106725530	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107012987	107012987	+	RNA	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107048872	107048872	+	RNA	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33595908	33595908	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33641839	33641839	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33658332	33658333	+	Nonsense_Mutation	DNP	CC	AA	AA	rs74737607	byFrequency;by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33881700	33881700	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5209203	5209203	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS1	9510	broad.mit.edu	37	21	28210911	28210911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28337778	28337778	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64635302	64635302	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84705802	84705802	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADARB2	105	broad.mit.edu	37	10	1229175	1229175	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45753510	45753510	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7520898	7520898	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY7	113	broad.mit.edu	37	16	50338319	50338319	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131915978	131915978	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	132051588	132051588	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31142997	31142997	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70922830	70922830	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1C	126	broad.mit.edu	37	4	100264205	100264205	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH6	130	broad.mit.edu	37	4	100134761	100134761	+	Splice_Site	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADI1	55256	broad.mit.edu	37	2	3504654	3504654	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP2	22850	broad.mit.edu	37	18	77893726	77893726	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2C	152	broad.mit.edu	37	4	3769780	3769780	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67051310	67051310	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58125463	58125463	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87089343	87089343	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50311573	50311573	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT6	137964	broad.mit.edu	37	8	41468294	41468294	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTR1	185	broad.mit.edu	37	3	148459392	148459392	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT	189	broad.mit.edu	37	2	241808247	241808247	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT	189	broad.mit.edu	37	2	241808788	241808788	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL1	10768	broad.mit.edu	37	1	110558988	110558988	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62302694	62302694	+	Intron	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIG1	51390	broad.mit.edu	37	6	143654649	143654649	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26655333	26655333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26672269	26672269	+	5'Flank	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AJAP1	55966	broad.mit.edu	37	1	4772109	4772109	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33293232	33293232	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91672051	91672051	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117130609	117130609	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B15	441282	broad.mit.edu	37	7	134260654	134260654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALCAM	214	broad.mit.edu	37	3	105251012	105251012	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125824755	125824755	+	Missense_Mutation	SNP	C	A	A	rs141656827	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1L2	644974	broad.mit.edu	37	3	129811928	129811928	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29446262	29446262	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29519836	29519836	+	Silent	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45920275	45920275	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56171050	56171050	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK3	57538	broad.mit.edu	37	15	85360091	85360091	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPPL2	251	broad.mit.edu	37	2	233274209	233274209	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR4	65062	broad.mit.edu	37	2	202494490	202494490	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMELX	265	broad.mit.edu	37	X	11316996	11316996	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY1A	276	broad.mit.edu	37	1	104234119	104234119	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41542077	41542077	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41552150	41552150	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114257903	114257903	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114277294	114277294	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD10	55608	broad.mit.edu	37	13	111562851	111562851	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13A	88455	broad.mit.edu	37	12	110471814	110471814	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73956695	73956695	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95646166	95646166	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95650137	95650137	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37486372	37486372	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37490350	37490350	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37508538	37508538	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD33	341405	broad.mit.edu	37	12	52281843	52281843	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD35	148741	broad.mit.edu	37	1	145558896	145558896	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197890025	197890025	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD45	339416	broad.mit.edu	37	1	173594012	173594012	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANLN	54443	broad.mit.edu	37	7	36446030	36446030	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANLN	54443	broad.mit.edu	37	7	36478690	36478690	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101462132	101462132	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101505439	101505439	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45771747	45771747	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69318114	69318114	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71779116	71779116	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1M1	8907	broad.mit.edu	37	19	16344420	16344420	+	Silent	SNP	C	A	A	rs149333439	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA1	320	broad.mit.edu	37	9	72047596	72047596	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCDD1	147495	broad.mit.edu	37	18	10485615	10485615	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCS	325	broad.mit.edu	37	1	159557685	159557685	+	5'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APITD1	378708	broad.mit.edu	37	1	10493733	10493733	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLNR	187	broad.mit.edu	37	11	57004333	57004333	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3B	9582	broad.mit.edu	37	22	39385550	39385550	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21246498	21246498	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC3	345	broad.mit.edu	37	11	116701533	116701533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC3	345	broad.mit.edu	37	11	116701620	116701620	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOH	350	broad.mit.edu	37	17	64219734	64219734	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL2	23780	broad.mit.edu	37	22	36623735	36623736	+	In_Frame_Ins	INS	-	GGG	GGG			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL4	80832	broad.mit.edu	37	22	36595486	36595486	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP8	343	broad.mit.edu	37	16	25232973	25232973	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115336380	115336380	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35235335	35235335	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24910126	24910126	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6876036	6876036	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6896572	6896572	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119112485	119112485	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130215686	130215686	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27105437	27105437	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157505488	157505488	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13B	200894	broad.mit.edu	37	3	93722539	93722539	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL4D	379	broad.mit.edu	37	17	41477512	41477512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109190162	109190162	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80886056	80886056	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC4	10093	broad.mit.edu	37	3	9839447	9839447	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35724358	35724358	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35771056	35771056	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35778812	35778812	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66352843	66352851	+	In_Frame_Del	DEL	TCCCTCTTT	-	-	rs115207014	byFrequency;by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131414157	131414157	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123254505	123254505	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB4	51666	broad.mit.edu	37	7	95125234	95125234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177142722	177142722	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100978646	100978646	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPHD2	57168	broad.mit.edu	37	22	26839173	26839173	+	3'UTR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASRGL1	80150	broad.mit.edu	37	11	62159785	62159785	+	3'UTR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176934192	176934192	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31324051	31324051	+	Silent	SNP	C	A	A	rs149577667	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD3B	83858	broad.mit.edu	37	1	1420477	1420477	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD3C	219293	broad.mit.edu	37	1	1387814	1387814	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96807883	96807883	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A2	23400	broad.mit.edu	37	1	17327033	17327033	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A3	79572	broad.mit.edu	37	3	194147764	194147764	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193029655	193029655	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28905841	28905841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152834703	152834703	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C1	27032	broad.mit.edu	37	3	130678149	130678149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C1	27032	broad.mit.edu	37	3	130686176	130686176	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C1	27032	broad.mit.edu	37	3	130716649	130716649	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5I	521	broad.mit.edu	37	4	667086	667086	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A1	535	broad.mit.edu	37	17	40666088	40666088	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52520526	52520526	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16327891	16327891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKC	6795	broad.mit.edu	37	19	57744004	57744004	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	70231466	70231466	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR1B	553	broad.mit.edu	37	1	206224651	206224651	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN1	8312	broad.mit.edu	37	16	396193	396193	+	Missense_Mutation	SNP	G	T	T	rs147515329		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT1	2683	broad.mit.edu	37	9	33113437	33113437	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79430555	79430555	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69949002	69949002	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70064120	70064120	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARHL2	343472	broad.mit.edu	37	1	91178042	91178042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72903483	72903483	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52583432	52583432	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCKDHB	594	broad.mit.edu	37	6	80878646	80878646	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL2L13	23786	broad.mit.edu	37	22	18138476	18138476	+	5'UTR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112053813	112053813	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112084521	112084521	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCS1L	617	broad.mit.edu	37	2	219527605	219527605	+	Splice_Site	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST4	266675	broad.mit.edu	37	1	45253505	45253505	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHE40	8553	broad.mit.edu	37	3	5025075	5025075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60577388	60577388	+	Missense_Mutation	SNP	G	A	A	rs141599424		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32491768	32491768	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BID	637	broad.mit.edu	37	22	18226769	18226769	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127808384	127808384	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51717914	51717914	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC8	112401	broad.mit.edu	37	19	53793907	53793907	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69093692	69093692	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22058733	22058733	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP4	652	broad.mit.edu	37	14	54416766	54416766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	34014337	34014337	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43287086	43287086	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13610219	13610219	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31626598	31626598	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36937289	36937289	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65944154	65944154	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65962715	65962715	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140481411	140481411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD7	29117	broad.mit.edu	37	16	50374056	50374056	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRMS1L	84312	broad.mit.edu	37	14	36337046	36337046	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79937889	79937889	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSDC1	55108	broad.mit.edu	37	1	32842006	32842006	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	107914417	107914417	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTD	686	broad.mit.edu	37	3	15686657	15686657	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A3	54718	broad.mit.edu	37	6	26428229	26428229	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf71	118461	broad.mit.edu	37	10	50531576	50531576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf88	80007	broad.mit.edu	37	10	124697465	124697465	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82643033	82643033	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf9	745	broad.mit.edu	37	11	61539444	61539444	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf26	84190	broad.mit.edu	37	12	82824732	82824732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf32	83695	broad.mit.edu	37	12	2997093	2997093	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103695875	103695875	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf101	54916	broad.mit.edu	37	14	57076090	57076090	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf28	122525	broad.mit.edu	37	14	45372554	45372554	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf37	145407	broad.mit.edu	37	14	58563716	58563716	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf39	317761	broad.mit.edu	37	14	60925284	60925284	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95910916	95910916	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf44	81556	broad.mit.edu	37	15	65888105	65888105	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf60	283677	broad.mit.edu	37	15	73852262	73852262	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf46	123775	broad.mit.edu	37	16	81097426	81097426	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf59	80178	broad.mit.edu	37	16	2511049	2511049	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf78	123970	broad.mit.edu	37	16	49407973	49407973	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf102	400591	broad.mit.edu	37	17	32904758	32904759	+	Intron	DNP	TG	CT	CT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf46	124783	broad.mit.edu	37	17	43333282	43333282	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf63	55731	broad.mit.edu	37	17	27085451	27085451	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf95	124512	broad.mit.edu	37	17	74729846	74729846	+	3'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf26	284254	broad.mit.edu	37	18	52258503	52258503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30992007	30992007	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf45	85019	broad.mit.edu	37	18	20948750	20948750	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf51	352909	broad.mit.edu	37	19	55670618	55670618	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244653795	244653795	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf106	55765	broad.mit.edu	37	1	200869434	200869434	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179339140	179339140	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf158	93190	broad.mit.edu	37	1	12819149	12819149	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57206348	57206348	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57252712	57252712	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75037751	75037751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038549	75038549	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf175	374977	broad.mit.edu	37	1	55145645	55145645	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf31	388753	broad.mit.edu	37	1	234510050	234510050	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf83	127428	broad.mit.edu	37	1	54520164	54520165	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60456364	60456364	+	Missense_Mutation	SNP	C	A	A	rs138699493		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf88	128344	broad.mit.edu	37	1	111893788	111893789	+	Intron	INS	-	TT	TT	rs11354622		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35731304	35731304	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35802514	35802514	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20079314	20079314	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf29	55317	broad.mit.edu	37	20	3804637	3804637	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf27A	29798	broad.mit.edu	37	2	132481000	132481000	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf51	200523	broad.mit.edu	37	2	88828655	88828655	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf56	55471	broad.mit.edu	37	2	37459132	37459132	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf15	89876	broad.mit.edu	37	3	119466073	119466073	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf19	51244	broad.mit.edu	37	3	14706639	14706639	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf35	339883	broad.mit.edu	37	3	37458935	37458935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175751758	175751758	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf34	375444	broad.mit.edu	37	5	43496007	43496007	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37162576	37162576	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf58	133874	broad.mit.edu	37	5	169672990	169672990	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714965	165714965	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf182	285753	broad.mit.edu	37	6	109480315	109480315	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf223	221416	broad.mit.edu	37	6	43970830	43970830	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf97	80129	broad.mit.edu	37	6	151917459	151917459	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf45	136263	broad.mit.edu	37	7	129847928	129847928	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf51	222950	broad.mit.edu	37	7	100085977	100085977	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120782100	120782100	+	Missense_Mutation	SNP	G	T	T	rs149665410		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120911417	120911417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf64	84060	broad.mit.edu	37	7	92164096	92164096	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57415296	57415296	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf37	157657	broad.mit.edu	37	8	96281413	96281413	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf74	203076	broad.mit.edu	37	8	10555073	10555074	+	Intron	DNP	CC	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39364588	39364588	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135447814	135447814	+	Missense_Mutation	SNP	C	G	G	rs141309620	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf24	84688	broad.mit.edu	37	9	34382653	34382653	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf25	203259	broad.mit.edu	37	9	34401172	34401172	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAB39L	81617	broad.mit.edu	37	13	49951249	49951249	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABYR	26256	broad.mit.edu	37	18	21735704	21735704	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13476086	13476086	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53766833	53766833	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181479550	181479550	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1G	8913	broad.mit.edu	37	17	48684342	48684342	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201010574	201010574	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81593676	81593676	+	Splice_Site	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81594867	81594868	+	Intron	INS	-	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54914903	54914903	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	55107418	55107418	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB1	782	broad.mit.edu	37	17	37343027	37343027	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18439905	18439905	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG6	59285	broad.mit.edu	37	19	54502988	54502988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86062198	86062198	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86062313	86062313	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62478012	62478012	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62478014	62478014	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188250312	188250312	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCR	799	broad.mit.edu	37	7	93108585	93108585	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALD1	800	broad.mit.edu	37	7	134613570	134613570	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALHM2	51063	broad.mit.edu	37	10	105209507	105209507	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110813916	110813916	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAP2	10486	broad.mit.edu	37	6	17421832	17421832	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44149082	44149082	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42694167	42694167	+	Intron	SNP	A	T	T	rs150759842	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPZA2	830	broad.mit.edu	37	7	116552119	116552119	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARTPT	9607	broad.mit.edu	37	5	71015816	71015816	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142985678	142985678	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142988854	142988854	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ1	844	broad.mit.edu	37	1	160165750	160165750	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFA2T2	9139	broad.mit.edu	37	20	32210976	32210976	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119103472	119103472	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX3	11335	broad.mit.edu	37	7	26251814	26251814	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBL1	883	broad.mit.edu	37	9	131597919	131597919	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBL1	883	broad.mit.edu	37	9	131607654	131607654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC123	84902	broad.mit.edu	37	19	33392059	33392059	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31592719	31592719	+	Silent	SNP	C	G	G	rs147399119		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC130	81576	broad.mit.edu	37	19	13862619	13862619	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128446346	128446346	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC149	91050	broad.mit.edu	37	4	24838915	24838915	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC15	80071	broad.mit.edu	37	11	124857934	124857934	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28A	25901	broad.mit.edu	37	6	139100941	139100941	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191075856	191075856	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111330915	111330915	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC80	151887	broad.mit.edu	37	3	112358703	112358703	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC97	90324	broad.mit.edu	37	19	41828654	41828654	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKAR	886	broad.mit.edu	37	4	26483736	26483736	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL15	6359	broad.mit.edu	37	17	34325363	34325363	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL26	10344	broad.mit.edu	37	7	75401182	75401182	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL4	6351	broad.mit.edu	37	17	34431161	34431161	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNA1	8900	broad.mit.edu	37	13	37012875	37012875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNE1	898	broad.mit.edu	37	19	30303884	30303884	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNF	899	broad.mit.edu	37	16	2506488	2506488	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT4	10575	broad.mit.edu	37	2	62100262	62100262	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10258573	10258573	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17072298	17072298	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD180	4064	broad.mit.edu	37	5	66479590	66479590	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28946891	28946891	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262102	158262102	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1	131450	broad.mit.edu	37	3	112648058	112648058	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD248	57124	broad.mit.edu	37	11	66084211	66084211	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2AP	23607	broad.mit.edu	37	6	47544176	47544176	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300E	342510	broad.mit.edu	37	17	72619716	72619716	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LG	146894	broad.mit.edu	37	17	41934478	41934478	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135741286	135741286	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD44	960	broad.mit.edu	37	11	35222539	35222539	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD46	4179	broad.mit.edu	37	1	207925395	207925395	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157805936	157805936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD96	10225	broad.mit.edu	37	3	111342670	111342670	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100889851	100889851	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100960421	100960422	+	Nonsense_Mutation	DNP	GG	CT	CT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227348290	227348290	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42EP4	23580	broad.mit.edu	37	17	71281726	71281726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA4	55038	broad.mit.edu	37	14	105477708	105477708	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA4	55038	broad.mit.edu	37	14	105477746	105477746	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24491822	24491822	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509642	24509642	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537761	24537761	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64982668	64982668	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64984694	64984694	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21854810	21854810	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21882679	21882679	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21975201	21975201	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19747068	19747068	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH19	28513	broad.mit.edu	37	18	64178885	64178885	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68867467	68867467	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59166403	59166403	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60348144	60348144	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60508075	60508075	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61689333	61689333	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61747894	61747894	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61858985	61858985	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881389	26881389	+	Silent	SNP	C	T	T	rs147182231		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26905983	26905983	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26988179	26988179	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40027946	40027946	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90377056	90377056	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDON	50937	broad.mit.edu	37	11	125864222	125864222	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDON	50937	broad.mit.edu	37	11	125889439	125889439	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDRT15P	94158	broad.mit.edu	37	17	13927984	13927984	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX4	1046	broad.mit.edu	37	X	72674320	72674320	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM18	729767	broad.mit.edu	37	19	51982017	51982017	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47499059	47499059	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11371046	11371046	+	3'UTR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF6	60677	broad.mit.edu	37	15	72579804	72579804	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109811510	109811510	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48697224	48697225	+	Missense_Mutation	DNP	CT	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPP	401541	broad.mit.edu	37	9	95375392	95375392	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP120	153241	broad.mit.edu	37	5	122724331	122724331	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170L	645455	broad.mit.edu	37	4	119461535	119461535	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP63	80254	broad.mit.edu	37	3	134280212	134280212	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP97	79598	broad.mit.edu	37	3	101443556	101443556	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP97	79598	broad.mit.edu	37	3	101447769	101447769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CER1	9350	broad.mit.edu	37	9	14720334	14720334	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55844395	55844395	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES2	8824	broad.mit.edu	37	16	66975441	66975441	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126486081	126486081	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD8	51287	broad.mit.edu	37	11	73584501	73584501	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7796813	7796813	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	369946	369946	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHML	1122	broad.mit.edu	37	1	241798993	241798993	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29252202	29252202	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRDL1	91851	broad.mit.edu	37	X	110002765	110002765	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184102866	184102866	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184106611	184106611	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45671427	45671427	+	Frame_Shift_Del	DEL	G	-	-	rs148878468	byFrequency;by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120142047	120142047	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120198709	120198709	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143027815	143027815	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143043957	143043957	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN7	1186	broad.mit.edu	37	16	1504333	1504333	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN10	9071	broad.mit.edu	37	13	96230256	96230256	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC3A	10143	broad.mit.edu	37	16	78064691	78064691	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIC3	9022	broad.mit.edu	37	9	139889751	139889751	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP4	79745	broad.mit.edu	37	2	29366550	29366550	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155233067	155233067	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNK	116449	broad.mit.edu	37	4	10559968	10559968	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1L	81037	broad.mit.edu	37	5	1324024	1324024	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1	1209	broad.mit.edu	37	19	45496195	45496195	+	3'UTR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMA1	1215	broad.mit.edu	37	14	24976618	24976618	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMKLR1	1240	broad.mit.edu	37	12	108686144	108686144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMYA5	202333	broad.mit.edu	37	5	79030273	79030273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP1	84735	broad.mit.edu	37	18	72247446	72247446	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150912786	150912786	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87670063	87670063	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87752012	87752012	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM1	26507	broad.mit.edu	37	10	101090517	101090517	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58590676	58590676	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135106985	135106985	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246805168	246805168	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74414578	74414578	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99931812	99931812	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147336213	147336213	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147964248	147964248	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP3	79937	broad.mit.edu	37	9	39178249	39178249	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76350378	76350378	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76482812	76482812	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76569506	76569506	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125204404	125204404	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125405454	125405454	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125505041	125505041	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125669151	125669151	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51258799	51258799	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107053032	107053032	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG6	57511	broad.mit.edu	37	13	40268805	40268805	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103377724	103377724	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103428282	103428282	+	Missense_Mutation	SNP	C	A	A	rs147271219		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103444661	103444661	+	Splice_Site	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75827165	75827165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75875431	75875431	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71634931	71634931	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46875463	46875463	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48263689	48263689	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A1	1277	broad.mit.edu	37	17	48274240	48274240	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139642861	139642861	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139838847	139838847	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86282601	86282601	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109738569	109738569	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116931198	116931198	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116945372	116945372	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116956584	116956584	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116956729	116956729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7415223	7415223	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48389270	48389270	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111114601	111114601	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A3BP	10087	broad.mit.edu	37	5	74807074	74807074	+	5'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	228004920	228004920	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107814669	107814669	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137703228	137703228	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189918982	189918982	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47409706	47409706	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47410292	47410292	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47545032	47545032	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238261291	238261291	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238275663	238275663	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48604605	48604605	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48605544	48605544	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70944628	70944628	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A2	1298	broad.mit.edu	37	1	40776820	40776820	+	Splice_Site	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS4	51138	broad.mit.edu	37	4	83989718	83989718	+	Intron	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS5	10987	broad.mit.edu	37	8	67958151	67958151	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPZ2	51226	broad.mit.edu	37	17	46111234	46111234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ9	57017	broad.mit.edu	37	16	57486813	57486813	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47663854	47663854	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47667000	47667000	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CP110	9738	broad.mit.edu	37	16	19548650	19548650	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130025014	130025014	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129906792	129906792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166385731	166385731	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166414461	166414461	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX2	10814	broad.mit.edu	37	5	175306929	175306929	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE3	8895	broad.mit.edu	37	8	87563527	87563527	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE7	27132	broad.mit.edu	37	16	89651113	89651113	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPPED1	55313	broad.mit.edu	37	16	12875245	12875245	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211512574	211512574	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1C	126129	broad.mit.edu	37	19	50200734	50200734	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008656	88008656	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197446847	197446847	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137590467	137590467	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75932315	75932315	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRK	1398	broad.mit.edu	37	17	1326950	1326950	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5844795	5844795	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152382339	152382339	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC3	64784	broad.mit.edu	37	15	91172586	91172586	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB1	1414	broad.mit.edu	37	22	27012132	27012132	+	Missense_Mutation	SNP	G	C	C	rs144920095	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGD	1421	broad.mit.edu	37	2	208988977	208988977	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RB	1439	broad.mit.edu	37	22	37325610	37325610	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43650913	43650913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34090638	34090638	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34204909	34204909	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113249397	113249397	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113301627	113301627	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113348836	113348836	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113599538	113599538	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113668414	113668414	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST8	10047	broad.mit.edu	37	20	23473740	23473740	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80646707	80646707	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80773070	80773070	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80835441	80835441	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80874769	80874769	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11236895	11236895	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11397029	11397029	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSF	8722	broad.mit.edu	37	11	66335115	66335115	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70281044	70281044	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16990393	16990393	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16990513	16990513	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL3	8452	broad.mit.edu	37	2	225368392	225368392	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL4A	8451	broad.mit.edu	37	13	113897369	113897369	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC27	10283	broad.mit.edu	37	5	64082413	64082413	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107224348	107224348	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107299594	107299594	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	48996897	48996897	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CX3CR1	1524	broad.mit.edu	37	3	39308000	39308000	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44871442	44871442	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL9	4283	broad.mit.edu	37	4	76927368	76927368	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR2	3579	broad.mit.edu	37	2	219000010	219000010	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR4	7852	broad.mit.edu	37	2	136873041	136873041	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR7	57007	broad.mit.edu	37	2	237489326	237489326	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC1	30827	broad.mit.edu	37	18	47810944	47810944	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf57	55086	broad.mit.edu	37	X	105883729	105883729	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5R1	51706	broad.mit.edu	37	1	202933914	202933914	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5R2	51700	broad.mit.edu	37	11	7693862	7693862	+	Intron	SNP	C	T	T	rs71837321		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143994039	143994039	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2F1	1572	broad.mit.edu	37	19	42012970	42012970	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2W1	54905	broad.mit.edu	37	7	1028168	1028168	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99447310	99447310	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99463537	99463537	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47400232	47400232	+	Splice_Site	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4B1	1580	broad.mit.edu	37	1	47279690	47279690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15784338	15784338	+	Splice_Site	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15757873	15757873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4Z1	199974	broad.mit.edu	37	1	47571865	47571865	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39390451	39390451	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72133996	72133996	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72255995	72255995	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT3	147906	broad.mit.edu	37	19	47151918	47151918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155699058	155699058	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAXX	1616	broad.mit.edu	37	6	33287597	33287597	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF15	90379	broad.mit.edu	37	19	14071859	14071859	+	3'UTR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF6	55827	broad.mit.edu	37	1	167956802	167956802	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD1	285761	broad.mit.edu	37	6	117841007	117841007	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50734291	50734291	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50994380	50994380	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14974866	14974866	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D2	55208	broad.mit.edu	37	13	114128671	114128671	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD1	80821	broad.mit.edu	37	14	53570567	53570567	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX17	10521	broad.mit.edu	37	22	38882078	38882078	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41201812	41201812	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX53	168400	broad.mit.edu	37	X	23020012	23020012	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60L	91351	broad.mit.edu	37	4	169322029	169322029	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169182257	169182257	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DECR1	1666	broad.mit.edu	37	8	91063968	91063968	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49986799	49986799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126219751	126219751	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197510276	197510276	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19352178	19352178	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9225135	9225135	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186002472	186002472	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137075975	137075975	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50146661	50146661	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72142863	72142864	+	Intron	INS	-	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41567678	41567678	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH2	1730	broad.mit.edu	37	X	96328001	96328001	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61537159	61537159	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2A	23181	broad.mit.edu	37	21	47977571	47977571	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51100372	51100372	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233001500	233001500	+	Intron	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83641482	83641482	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84245776	84245776	+	Splice_Site	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35351024	35351024	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35365744	35365744	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170592564	170592564	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMP1	1758	broad.mit.edu	37	4	88583892	88583892	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMP1	1758	broad.mit.edu	37	4	88584284	88584284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMWD	1762	broad.mit.edu	37	19	46287637	46287638	+	Intron	DNP	CC	TG	TG			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMWD	1762	broad.mit.edu	37	19	46287940	46287940	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMWD	1762	broad.mit.edu	37	19	46288027	46288027	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21640486	21640486	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52397186	52397186	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	20952875	20952875	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21049074	21049074	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21073886	21073886	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11556077	11556077	+	Splice_Site	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11726227	11726227	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11757756	11757756	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC3	5611	broad.mit.edu	37	13	96394796	96394796	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC8	22826	broad.mit.edu	37	1	28537039	28537039	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAL1	83544	broad.mit.edu	37	14	74125629	74125629	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT1	1786	broad.mit.edu	37	19	10249218	10249218	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94342676	94342676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51370646	51370646	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK5	80005	broad.mit.edu	37	8	25168016	25168016	+	Missense_Mutation	SNP	G	T	T	rs146574972		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK2	9046	broad.mit.edu	37	8	21767420	21767421	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67406111	67406111	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY2	9980	broad.mit.edu	37	21	37652539	37652539	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOT1L	84444	broad.mit.edu	37	19	2220147	2220147	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162876717	162876717	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DQX1	165545	broad.mit.edu	37	2	74747218	74747218	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD1	1812	broad.mit.edu	37	5	174869611	174869611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD1	1812	broad.mit.edu	37	5	174870123	174870123	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113281704	113281704	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113288937	113288937	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28574489	28574489	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117403064	117403064	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28914145	28914145	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56473623	56473623	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32459649	32459649	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTWD1	56986	broad.mit.edu	37	15	49935624	49935624	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP28	285193	broad.mit.edu	37	2	241500849	241500849	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103039571	103039571	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103182692	103182692	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103182715	103182715	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103270477	103270477	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNLRB2	83657	broad.mit.edu	37	16	80583453	80583453	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4711896	4711896	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71744159	71744159	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96264337	96264337	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96272140	96272140	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	183994420	183994420	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172474945	172474945	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDAR	10913	broad.mit.edu	37	2	109524268	109524268	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDC4	23644	broad.mit.edu	37	16	67915484	67915484	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM3	80267	broad.mit.edu	37	1	184692959	184692960	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EED	8726	broad.mit.edu	37	11	85963272	85963272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EED	8726	broad.mit.edu	37	11	85979601	85979601	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	127983561	127983561	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	128077255	128077255	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB5	374786	broad.mit.edu	37	17	28396155	28396155	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHA2	286097	broad.mit.edu	37	8	16948123	16948123	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19984598	19984598	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38370546	38370546	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55220429	55220429	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55224350	55224350	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110915769	110915769	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34396264	34396264	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34398174	34398174	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1L1	254102	broad.mit.edu	37	11	65351612	65351612	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3IP1	442720	broad.mit.edu	37	7	109599655	109599655	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184038793	184038793	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184045208	184045208	+	Silent	SNP	G	T	T	rs113108196		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184046479	184046479	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184052538	184052538	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36895239	36895239	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL7	79993	broad.mit.edu	37	5	60053392	60053392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP3	55140	broad.mit.edu	37	8	27987005	27987005	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELSPBP1	64100	broad.mit.edu	37	19	48519419	48519419	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR2	30817	broad.mit.edu	37	19	14875407	14875407	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR4P	326342	broad.mit.edu	37	19	6988879	6988879	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENHO	375704	broad.mit.edu	37	9	34521483	34521483	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO3	2027	broad.mit.edu	37	17	4856127	4856127	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43843782	43843782	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111441486	111441486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTHD1	150350	broad.mit.edu	37	22	40272053	40272053	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD2	954	broad.mit.edu	37	9	139946604	139946604	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L1	2036	broad.mit.edu	37	20	34797802	34797802	+	Silent	SNP	G	T	T	rs142392996		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131211391	131211391	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPDR1	54749	broad.mit.edu	37	7	37960403	37960403	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89259220	89259220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89390124	89390124	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89498604	89498604	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93956568	93956568	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93967841	93967841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670882	134670882	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670923	134670923	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134851908	134851908	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134911468	134911468	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134967080	134967080	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142568025	142568025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	213291209	213291209	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56468700	56468700	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERMN	57471	broad.mit.edu	37	2	158178131	158178131	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC1	55763	broad.mit.edu	37	4	56726659	56726659	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	572554	572554	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133502044	133502044	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133692395	133692395	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66063486	66063486	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66115103	66115103	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	66115229	66115229	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197026157	197026157	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13B	2165	broad.mit.edu	37	1	197026458	197026458	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169500372	169500372	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F7	2155	broad.mit.edu	37	13	113770069	113770069	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F9	2158	broad.mit.edu	37	X	138623303	138623303	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP4	2167	broad.mit.edu	37	8	82392896	82392896	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14816390	14816390	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM108A1	81926	broad.mit.edu	37	19	1881444	1881444	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM118B	79607	broad.mit.edu	37	11	126110847	126110847	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170627006	170627006	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120C	54954	broad.mit.edu	37	X	54162861	54162861	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131521368	131521368	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131521382	131521382	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143056553	143056553	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71138169	71138169	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139158255	139158255	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139380382	139380382	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153B	202134	broad.mit.edu	37	5	175488843	175488843	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A2	84067	broad.mit.edu	37	11	6232933	6232933	+	Missense_Mutation	SNP	G	A	A	rs139429864		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161A	84140	broad.mit.edu	37	2	62066780	62066780	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187625984	187625984	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187626951	187626951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187627260	187627260	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30921765	30921765	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190A	401145	broad.mit.edu	37	4	91549144	91549144	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68587838	68587838	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A3	284467	broad.mit.edu	37	1	113264808	113264808	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A5	25817	broad.mit.edu	37	22	49103622	49103622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A5	25817	broad.mit.edu	37	22	49103825	49103837	+	Intron	DEL	TCCTGACCATCTG	-	-	rs141710021		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028486	37028486	+	Missense_Mutation	SNP	C	A	A	rs142735792	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24330937	24330937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49A	81553	broad.mit.edu	37	2	16745340	16745340	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250431	177250432	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067407	190067407	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067891	190067891	+	Missense_Mutation	SNP	G	T	T	rs147799875		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190250803	190250803	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65A	79567	broad.mit.edu	37	16	67576776	67576776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM69C	125704	broad.mit.edu	37	18	72109163	72109163	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM74A3	728495	broad.mit.edu	37	9	40716166	40716166	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702662	40702662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702747	40702747	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40704246	40704246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40705716	40705716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40705718	40705718	+	Silent	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90536114	90536114	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM81A	145773	broad.mit.edu	37	15	59752207	59752207	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83A	84985	broad.mit.edu	37	8	124203984	124203984	+	Intron	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83F	113828	broad.mit.edu	37	22	40417379	40417379	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83G	644815	broad.mit.edu	37	17	18881367	18881367	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83H	286077	broad.mit.edu	37	8	144810181	144810181	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89831493	89831493	+	Intron	SNP	C	A	A	rs17233225		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCI	55215	broad.mit.edu	37	15	89821877	89821877	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163081954	163081955	+	Intron	INS	-	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP2	9855	broad.mit.edu	37	2	242407622	242407622	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASLG	356	broad.mit.edu	37	1	172628540	172628540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD1	79675	broad.mit.edu	37	2	170394674	170394674	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187527368	187527368	+	Splice_Site	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92534273	92534273	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92569684	92569684	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126329538	126329538	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126336493	126336493	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126367447	126367447	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126372972	126372972	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126412741	126412741	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45960905	45960905	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45996263	45996263	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48776242	48776242	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127622515	127622515	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127644853	127644853	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBP2	8789	broad.mit.edu	37	9	97325681	97325681	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO8	26269	broad.mit.edu	37	4	175158774	175158774	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161479793	161479793	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHO1	23149	broad.mit.edu	37	19	17893782	17893782	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157670328	157670328	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680550	161680550	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14861919	14861919	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF11	2256	broad.mit.edu	37	17	7344743	7344743	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102375181	102375181	+	Nonstop_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF18	8817	broad.mit.edu	37	5	170883614	170883614	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF5	2250	broad.mit.edu	37	4	81188290	81188290	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38285552	38285552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50514655	50514655	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGN	55137	broad.mit.edu	37	2	164467481	164467481	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76124323	76124323	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FITM1	161247	broad.mit.edu	37	14	24601569	24601569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72743399	72743399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP9	11328	broad.mit.edu	37	7	33014286	33014286	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKTN	2218	broad.mit.edu	37	9	108363572	108363572	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152326249	152326249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277576	152277576	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277615	152277615	+	Missense_Mutation	SNP	G	T	T	rs146017726	byFrequency;by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ35220	284131	broad.mit.edu	37	17	78395813	78395813	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ36000	284124	broad.mit.edu	37	17	21904656	21904656	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ36000	284124	broad.mit.edu	37	17	21906575	21906575	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40504	284085	broad.mit.edu	37	17	26604560	26604560	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84609611	84609611	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58124020	58124020	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128489169	128489169	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128493676	128493676	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128496863	128496863	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128497099	128497099	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT3	23767	broad.mit.edu	37	20	14306824	14306824	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180048740	180048740	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240334511	240334511	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240494014	240494014	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMOD	2331	broad.mit.edu	37	1	203322652	203322652	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216288040	216288040	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3A	22862	broad.mit.edu	37	13	49777385	49777385	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC4	64838	broad.mit.edu	37	2	27715496	27715496	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89420530	89420530	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49186290	49186290	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49229960	49229960	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOSB	2354	broad.mit.edu	37	19	45976256	45976256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXK1	221937	broad.mit.edu	37	7	4796696	4796696	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114066505	114066506	+	Intron	DNP	GG	CT	CT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114284717	114284717	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114299759	114299759	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXR2	139628	broad.mit.edu	37	X	55651049	55651049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXRED1	55572	broad.mit.edu	37	11	126139201	126139201	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79204011	79204011	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49409474	49409474	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRS2	10818	broad.mit.edu	37	12	69968531	69968531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCN3	29999	broad.mit.edu	37	7	127238614	127238614	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL4	23105	broad.mit.edu	37	5	132556280	132556280	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162402417	162402417	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	163032464	163032464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FST	10468	broad.mit.edu	37	5	52781424	52781424	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202684	39202684	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD1	8321	broad.mit.edu	37	7	90895699	90895699	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC2	57818	broad.mit.edu	37	2	169764033	169764033	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC2	57818	broad.mit.edu	37	2	169764700	169764700	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17468824	17468824	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29549974	29549974	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29572417	29572417	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46314444	46314444	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161116240	161116240	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47405711	47405711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB2	2561	broad.mit.edu	37	5	160761929	160761929	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46066629	46066629	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27772565	27772565	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151820193	151820193	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171715317	171715317	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26512676	26512676	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26518625	26518625	+	Silent	SNP	C	A	A	rs145045666		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GADL1	339896	broad.mit.edu	37	3	30886021	30886021	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST1	9514	broad.mit.edu	37	22	30953228	30953228	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL3ST3	89792	broad.mit.edu	37	11	65811101	65811101	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155115717	155115717	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230415090	230415090	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158115854	158115854	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130111207	130111207	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101011608	101011608	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8100776	8100776	+	Silent	SNP	G	A	A	rs28395792		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP2	2634	broad.mit.edu	37	1	89573837	89573837	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCA	25801	broad.mit.edu	37	2	163212934	163212934	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCDH	2639	broad.mit.edu	37	19	13004356	13004356	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44187204	44187204	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53379289	53379289	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT1	2650	broad.mit.edu	37	9	79117415	79117415	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT7	140687	broad.mit.edu	37	20	55099763	55099763	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74840612	74840612	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76928510	76928510	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76982463	76982463	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGA2	23062	broad.mit.edu	37	16	23499847	23499847	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT1	2678	broad.mit.edu	37	22	25023491	25023491	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31013852	31013852	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42467834	42467834	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59597021	59597021	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150417046	150417046	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP6	474344	broad.mit.edu	37	7	150327050	150327050	+	Intron	SNP	G	T	T	rs141160524	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150164204	150164204	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GINS2	51659	broad.mit.edu	37	16	85715101	85715101	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA8	2703	broad.mit.edu	37	1	147380368	147380368	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK5	256356	broad.mit.edu	37	3	141932244	141932244	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30726207	30726207	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134244849	134244849	+	Intron	SNP	G	T	T	rs113408550		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8099630	8099630	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6606739	6606739	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39053883	39053883	+	3'UTR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151234798	151234798	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183933277	183933277	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG4	2786	broad.mit.edu	37	1	235779454	235779454	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNGT1	2792	broad.mit.edu	37	7	93536190	93536190	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121417022	121417022	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167761334	167761334	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLT1B	51026	broad.mit.edu	37	12	21654939	21654939	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOPC	57120	broad.mit.edu	37	6	117753475	117753475	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1	2805	broad.mit.edu	37	10	101165669	101165669	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT2	2806	broad.mit.edu	37	16	58756015	58756015	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	133087218	133087218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94958244	94958244	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPN1	11321	broad.mit.edu	37	2	27857779	27857779	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136113092	136113092	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR108	56927	broad.mit.edu	37	19	6732044	6732044	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135435659	135435659	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135487937	135487937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47682493	47682493	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131605355	131605355	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131605422	131605422	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043588	20043588	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154145201	154145201	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154147120	154147120	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR156	165829	broad.mit.edu	37	3	119887165	119887165	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887045	25887045	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97247514	97247514	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR65	8477	broad.mit.edu	37	14	88477441	88477441	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR6	2830	broad.mit.edu	37	6	110300858	110300858	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR77	27202	broad.mit.edu	37	19	47844849	47844849	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR83	10888	broad.mit.edu	37	11	94134282	94134282	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR97	222487	broad.mit.edu	37	16	57712138	57712138	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN2	9721	broad.mit.edu	37	10	46999701	46999701	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113604246	113604247	+	Intron	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAP2	9402	broad.mit.edu	37	22	40367056	40367056	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB14	2888	broad.mit.edu	37	2	165404372	165404372	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153077700	153077700	+	Missense_Mutation	SNP	G	T	T	rs147418341		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158142990	158142990	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	93511213	93511213	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94344163	94344163	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94377139	94377139	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	31023525	31023525	+	Silent	SNP	G	A	A	rs146591187		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102372694	102372694	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102483213	102483213	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9934562	9934562	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9943758	9943758	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3B	116444	broad.mit.edu	37	19	1008897	1008897	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121086101	121086101	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM2	2912	broad.mit.edu	37	3	51747313	51747313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7621006	7621006	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173818	126173818	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52657827	52657828	+	Intron	INS	-	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27474767	27474767	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27517400	27517401	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP8	29083	broad.mit.edu	37	3	112710111	112710111	+	Missense_Mutation	SNP	G	A	A	rs146036883	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTSF1	121355	broad.mit.edu	37	12	54857220	54857220	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106698006	106698006	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSB	2990	broad.mit.edu	37	7	65429376	65429376	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105198211	105198211	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAND2	9464	broad.mit.edu	37	4	174448523	174448523	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7875833	7875833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119929175	119929175	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS6	54801	broad.mit.edu	37	9	19078172	19078172	+	Splice_Site	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55145222	55145222	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC11	79885	broad.mit.edu	37	3	13540103	13540103	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	239990288	239990288	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240111860	240111860	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18832988	18832988	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	19015355	19015355	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	19015373	19015373	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50534698	50534698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41010120	41010120	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41018522	41018523	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41045869	41045869	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41070936	41070936	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43484130	43484130	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43548638	43548638	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43581559	43581559	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92837962	92837962	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93839114	93839114	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91790257	91790257	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81350104	81350104	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGS	9146	broad.mit.edu	37	17	79660635	79660635	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGS	9146	broad.mit.edu	37	17	79662893	79662893	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHATL	57467	broad.mit.edu	37	3	42739589	42739589	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHLA2	11148	broad.mit.edu	37	3	108095392	108095392	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100515506	100515506	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AE	3012	broad.mit.edu	37	6	26217275	26217275	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BH	8345	broad.mit.edu	37	6	26252083	26252083	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3F	8968	broad.mit.edu	37	6	26250535	26250535	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71025520	71025520	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31245300	31245300	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DMA	3108	broad.mit.edu	37	6	32918136	32918136	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPB1	3115	broad.mit.edu	37	6	33052926	33052926	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPB1	3115	broad.mit.edu	37	6	33074438	33074438	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLX	3142	broad.mit.edu	37	1	221054757	221054757	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186031015	186031015	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55364081	55364081	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMMR	3161	broad.mit.edu	37	5	162902408	162902408	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMOX1	3162	broad.mit.edu	37	22	35789515	35789515	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMP19	51617	broad.mit.edu	37	5	173531355	173531355	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	43052943	43052943	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	43058194	43058194	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPH1	3187	broad.mit.edu	37	5	179050070	179050070	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL1	11100	broad.mit.edu	37	19	41782156	41782156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRPDL	9987	broad.mit.edu	37	4	83347646	83347646	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60287598	60287598	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK2	29911	broad.mit.edu	37	19	12875625	12875625	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA10	3206	broad.mit.edu	37	7	27213050	27213050	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC13	3229	broad.mit.edu	37	12	54333267	54333267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC4	3221	broad.mit.edu	37	12	54428047	54428047	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD13	3239	broad.mit.edu	37	2	176958400	176958400	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS3	84343	broad.mit.edu	37	3	148847543	148847543	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11276336	11276336	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST3B1	9953	broad.mit.edu	37	17	14205168	14205168	+	Silent	SNP	G	T	T	rs62636622	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	97484870	97484870	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B3	3293	broad.mit.edu	37	9	99006653	99006653	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38645351	38645351	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B7P2	158160	broad.mit.edu	37	10	38647334	38647334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF5	124535	broad.mit.edu	37	17	56557394	56557394	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148731071	148731071	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB1	3326	broad.mit.edu	37	6	44217663	44217663	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22176624	22176624	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22211675	22211675	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22222419	22222419	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1A	3350	broad.mit.edu	37	5	63256918	63256918	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1E	3354	broad.mit.edu	37	6	87725964	87725964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1F	3355	broad.mit.edu	37	3	88039965	88039965	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2A	3356	broad.mit.edu	37	13	47409239	47409239	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113849821	113849821	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113850014	113850014	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3B	9177	broad.mit.edu	37	11	113803681	113803681	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154862664	154862664	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154862942	154862942	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154863469	154863469	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154876005	154876005	+	Missense_Mutation	SNP	C	A	A	rs145653373		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154876017	154876017	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3201610	3201610	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICA1	3382	broad.mit.edu	37	7	8183563	8183563	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA10	3446	broad.mit.edu	37	9	21206650	21206650	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA4	3441	broad.mit.edu	37	9	21186874	21186874	+	3'UTR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA8	3445	broad.mit.edu	37	9	21409265	21409265	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNW1	3467	broad.mit.edu	37	9	21141502	21141502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27677166	27677166	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65621517	65621517	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23508209	23508209	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160523695	160523695	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFL1	374918	broad.mit.edu	37	19	46733983	46733984	+	Intron	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201195085	201195085	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBIP	121457	broad.mit.edu	37	12	99008138	99008138	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF1	10320	broad.mit.edu	37	7	50444527	50444527	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF1	10320	broad.mit.edu	37	7	50455013	50455013	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB1	3594	broad.mit.edu	37	19	18170764	18170764	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RA	23765	broad.mit.edu	37	22	17589502	17589502	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL18RAP	8807	broad.mit.edu	37	2	103063349	103063350	+	Intron	DNP	AG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27374420	27374420	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154422369	154422369	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876290	35876290	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166892009	166892009	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILF3	3609	broad.mit.edu	37	19	10791821	10791821	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILVBL	10994	broad.mit.edu	37	19	15230306	15230306	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76715026	76715026	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76715292	76715292	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING1	3621	broad.mit.edu	37	13	111371668	111371668	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBB	3625	broad.mit.edu	37	2	121107469	121107469	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134463936	134463936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134595383	134595383	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSR	3643	broad.mit.edu	37	19	7267321	7267321	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1538688	1538688	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K1	9807	broad.mit.edu	37	3	49785344	49785344	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44432190	44432190	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417776	25417776	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCJ	654502	broad.mit.edu	37	3	158983078	158983078	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75948542	75948542	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK2	3656	broad.mit.edu	37	3	10251392	10251392	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78786160	78786160	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX1	79192	broad.mit.edu	37	5	3599391	3599391	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52223409	52223409	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA7	3679	broad.mit.edu	37	12	56090819	56090819	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31435572	31435572	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495236	30495236	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187487164	187487164	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31372376	31372376	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31388578	31388578	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31392968	31392968	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB3	3690	broad.mit.edu	37	17	45376866	45376867	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGBL1	9358	broad.mit.edu	37	13	102235729	102235729	+	Intron	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52813406	52813406	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7785054	7785054	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52850891	52850891	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52863335	52863335	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7679180	7679180	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITM2B	9445	broad.mit.edu	37	13	48832205	48832205	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24439093	24439093	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM2	58494	broad.mit.edu	37	21	27056274	27056274	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JOSD2	126119	broad.mit.edu	37	19	51013674	51013674	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39919432	39919432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124153414	124153414	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740301	62740301	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD6	89890	broad.mit.edu	37	13	41705439	41705439	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA6	3742	broad.mit.edu	37	12	4919230	4919230	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	155893839	155893839	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	156170725	156170725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73848595	73848595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC4	3749	broad.mit.edu	37	1	110768631	110768631	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC4	3749	broad.mit.edu	37	1	110768730	110768730	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119915076	119915076	+	Silent	SNP	C	T	T	rs138118192	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND3	3752	broad.mit.edu	37	1	112319769	112319769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211192227	211192227	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61623234	61623234	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163228428	163228428	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	21305381	21305381	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128375	68128375	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155711841	155711841	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ4	3761	broad.mit.edu	37	22	38822693	38822693	+	3'UTR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118969189	118969189	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK9	51305	broad.mit.edu	37	8	140631039	140631039	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73904298	73904298	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196448362	196448362	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36671868	36671868	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36746652	36746652	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36766906	36766906	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD15	79047	broad.mit.edu	37	19	34302440	34302440	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD19	146212	broad.mit.edu	37	16	67354439	67354439	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6748971	6748971	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4DL	390245	broad.mit.edu	37	11	94759373	94759373	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94731487	94731487	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142649457	142649457	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142658594	142658594	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS2	202559	broad.mit.edu	37	6	62604730	62604730	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48424220	48424220	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48459808	48459808	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0174	9798	broad.mit.edu	37	16	71961559	71961559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43896124	43896124	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0513	9764	broad.mit.edu	37	16	85109450	85109450	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8777737	8777737	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155891679	155891679	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1045	23349	broad.mit.edu	37	9	34971833	34971833	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57193889	57193889	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1257	57501	broad.mit.edu	37	3	128695883	128695883	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1328	57536	broad.mit.edu	37	18	34539372	34539372	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113737532	113737532	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5754900	5754900	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180885948	180885948	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43493755	43493755	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1644	85352	broad.mit.edu	37	22	44681700	44681700	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20881987	20881987	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20907241	20907241	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20953055	20953055	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20986465	20986465	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44889629	44889629	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18B	146909	broad.mit.edu	37	17	43004470	43004470	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72346768	72346768	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241684803	241684803	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10394657	10394657	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1C	10749	broad.mit.edu	37	17	4905591	4905591	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200969510	200969510	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901776	51901776	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57970090	57970090	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF6	221458	broad.mit.edu	37	6	39507930	39507930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF7	374654	broad.mit.edu	37	15	90172699	90172699	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55282321	55282321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL4	3805	broad.mit.edu	37	19	55325168	55325168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55331374	55331374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55331552	55331552	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55347305	55347305	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55354478	55354478	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158064100	158064101	+	Splice_Site	DNP	CA	AG	AG			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC4	89953	broad.mit.edu	37	6	43034679	43034679	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30257087	30257088	+	Intron	DNP	CG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70413317	70413317	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681666	70681666	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL32	114792	broad.mit.edu	37	6	97562151	97562151	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21674113	21674113	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL38	340359	broad.mit.edu	37	8	124664765	124664765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL3	26249	broad.mit.edu	37	5	136964068	136964068	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86773015	86773015	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRG2	346689	broad.mit.edu	37	7	139164538	139164538	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135012916	135012916	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123054128	123054128	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA2	3838	broad.mit.edu	37	17	66033164	66033164	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160231984	160231984	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRI1	65095	broad.mit.edu	37	19	10673555	10673555	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT38	8687	broad.mit.edu	37	17	39594724	39594724	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT73	319101	broad.mit.edu	37	12	53001921	53001921	+	3'UTR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52964617	52964617	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT82	3888	broad.mit.edu	37	12	52799789	52799789	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52758013	52758013	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-6	337973	broad.mit.edu	37	21	31914007	31914007	+	Missense_Mutation	SNP	C	T	T	rs146590456		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-7	337974	broad.mit.edu	37	21	31933543	31933543	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP21-2	337978	broad.mit.edu	37	21	32119316	32119317	+	Missense_Mutation	DNP	CA	TC	TC			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP24-1	643803	broad.mit.edu	37	21	31654363	31654363	+	3'UTR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-8	83901	broad.mit.edu	37	17	39394620	39394620	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTELC1	56983	broad.mit.edu	37	3	119199121	119199121	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTELC1	56983	broad.mit.edu	37	3	119207715	119207715	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153137770	153137770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62675725	62675725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6986082	6986082	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7026164	7026164	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129468102	129468102	+	Splice_Site	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112496655	112496655	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107605093	107605093	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107642212	107642212	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209799050	209799050	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133962940	133962940	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL1	10314	broad.mit.edu	37	2	211301246	211301246	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARGE	9215	broad.mit.edu	37	22	33777775	33777775	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	128990585	128990585	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	128990591	128990591	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154181811	154181811	+	Missense_Mutation	SNP	G	T	T	rs145327227		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP6	55323	broad.mit.edu	37	15	71124586	71124586	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBH	81606	broad.mit.edu	37	2	30457385	30457385	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2D	353141	broad.mit.edu	37	1	152636662	152636662	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3E	353145	broad.mit.edu	37	1	152538380	152538380	+	3'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46705123	46705123	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LELP1	149018	broad.mit.edu	37	1	153177398	153177398	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202274743	202274743	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202275935	202275935	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202288240	202288240	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHCGR	3973	broad.mit.edu	37	2	48925784	48925784	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104309860	104309860	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFP	10186	broad.mit.edu	37	13	40174972	40174972	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIF	3976	broad.mit.edu	37	22	30640878	30640878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55098788	55098788	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54733675	54733675	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175173	55175173	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPN	643418	broad.mit.edu	37	10	90537778	90537778	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNB1	4001	broad.mit.edu	37	5	126156789	126156789	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNB2	84823	broad.mit.edu	37	19	2444466	2444466	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1A	4009	broad.mit.edu	37	1	165173231	165173231	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC113230	113230	broad.mit.edu	37	19	14181568	14181568	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150776	150776	broad.mit.edu	37	2	132277416	132277417	+	Intron	DNP	TG	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27535658	27535658	+	3'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC407835	407835	broad.mit.edu	37	7	128767070	128767070	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49598502	49598502	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC493754	493754	broad.mit.edu	37	7	66018875	66018875	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643387	643387	broad.mit.edu	37	2	239140941	239140941	+	3'UTR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15323297	15323297	+	RNA	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75812795	75812795	+	3'UTR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729156	729156	broad.mit.edu	37	7	66302875	66302875	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22472280	22472280	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22764469	22764469	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23055496	23055496	+	RNA	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23101804	23101804	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23154706	23154706	+	RNA	SNP	C	A	A	rs1065470		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23253295	23253295	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161010785	161010785	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161021898	161021898	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT4	254531	broad.mit.edu	37	15	34654913	34654913	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82433803	82433803	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62679563	62679563	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62897363	62897363	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN3	64900	broad.mit.edu	37	20	39984671	39984671	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197581339	197581339	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH4	4034	broad.mit.edu	37	7	100179906	100179906	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133868684	133868684	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141079550	141079550	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141115485	141115485	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141747099	141747099	+	Splice_Site	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141771402	141771402	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170012818	170012818	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170163811	170163811	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP5	4041	broad.mit.edu	37	11	68216547	68216547	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC10	376132	broad.mit.edu	37	12	70004436	70004436	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194081494	194081494	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40137206	40137206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC59	55379	broad.mit.edu	37	17	48470177	48470177	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC59	55379	broad.mit.edu	37	17	48474597	48474597	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8A	56262	broad.mit.edu	37	9	131670448	131670448	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85626515	85626515	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN4	164312	broad.mit.edu	37	20	6022614	6022614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM1	347730	broad.mit.edu	37	2	80530201	80530201	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745707	77745707	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115560789	115560789	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	116163786	116163786	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSG1	55341	broad.mit.edu	37	3	194365490	194365490	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSP1	4046	broad.mit.edu	37	11	1904748	1904748	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSS	4047	broad.mit.edu	37	21	47611049	47611049	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSS	4047	broad.mit.edu	37	21	47630707	47630707	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSS	4047	broad.mit.edu	37	21	47630709	47630709	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33567972	33567972	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBR	4055	broad.mit.edu	37	12	6497951	6497951	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTK	4058	broad.mit.edu	37	15	41797642	41797642	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTK	4058	broad.mit.edu	37	15	41799191	41799191	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235945360	235945360	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL4	131375	broad.mit.edu	37	3	42445656	42445656	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21343120	21343120	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L1	4081	broad.mit.edu	37	13	36049377	36049377	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39816610	39816610	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39826501	39826501	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39910299	39910299	+	Intron	SNP	C	A	A	rs148361821	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166962130	166962130	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA3	4102	broad.mit.edu	37	X	151935453	151935453	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995906	140995906	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140969830	140969830	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED1	9500	broad.mit.edu	37	X	51641313	51641313	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54839521	54839521	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	118045579	118045579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBA	4126	broad.mit.edu	37	4	103595107	103595107	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71499717	71499717	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21201688	21201688	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21208333	21208333	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K4	6416	broad.mit.edu	37	17	12011084	12011084	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210558918	210558918	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K1	11184	broad.mit.edu	37	19	39103297	39103297	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPRE2	10982	broad.mit.edu	37	18	32682021	32682021	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCKS	4082	broad.mit.edu	37	6	114181761	114181761	+	3'UTR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST2	23139	broad.mit.edu	37	1	46488514	46488514	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATK	4145	broad.mit.edu	37	19	3785124	3785124	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN1	4146	broad.mit.edu	37	1	31187962	31187962	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	99042728	99042728	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBLAC2	153364	broad.mit.edu	37	5	89756990	89756990	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC2R	4158	broad.mit.edu	37	18	13885213	13885213	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCC	4163	broad.mit.edu	37	5	112437459	112437459	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113729424	113729424	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100395638	100395638	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100403903	100403903	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47530601	47530601	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151067807	151067807	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151083776	151083776	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60028130	60028130	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED4	29079	broad.mit.edu	37	13	48664595	48664595	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2C	4208	broad.mit.edu	37	5	88119488	88119488	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEN1	4221	broad.mit.edu	37	11	64574890	64574890	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3B	84206	broad.mit.edu	37	15	82336979	82336979	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD6L	162387	broad.mit.edu	37	17	8702181	8702181	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141756802	141756802	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141765202	141765202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74865025	74865025	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135102759	135102759	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC26647	219557	broad.mit.edu	37	7	88423497	88423497	+	Nonstop_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB1	57534	broad.mit.edu	37	18	19418493	19418493	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALL2	79778	broad.mit.edu	37	7	1474410	1474410	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOX	55586	broad.mit.edu	37	22	50925377	50925377	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1200	100302113	broad.mit.edu	37	7	36959002	36959002	+	RNA	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1261	100302228	broad.mit.edu	37	11	90602343	90602343	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR548A2	693126	broad.mit.edu	37	6	135560225	135560225	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR622	693207	broad.mit.edu	37	13	90882965	90882965	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKKS	8195	broad.mit.edu	37	20	10393358	10393358	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKL1	57591	broad.mit.edu	37	22	40814545	40814545	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKL1	57591	broad.mit.edu	37	22	40831402	40831402	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH1	4292	broad.mit.edu	37	3	37053461	37053461	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945260	151945260	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20363643	20363643	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMD2	221938	broad.mit.edu	37	7	4965226	4965226	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89086857	89086857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90856532	90856532	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS2	4338	broad.mit.edu	37	5	52397233	52397233	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62931366	62931366	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC2	22880	broad.mit.edu	37	22	31342403	31342403	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132694184	132694184	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13150681	13150681	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123661343	123661343	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123679134	123679134	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56348979	56348979	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56353093	56353093	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56355090	56355090	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30516971	30516971	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60769494	60769494	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL11	65003	broad.mit.edu	37	11	66204240	66204240	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A10	341116	broad.mit.edu	37	11	60561426	60561426	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A10	341116	broad.mit.edu	37	11	60561637	60561637	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60269328	60269328	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60164178	60164178	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60170262	60170262	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59860356	59860356	+	Intron	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47693793	47693793	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI1	4440	broad.mit.edu	37	12	120802651	120802651	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1B	4490	broad.mit.edu	37	16	56685902	56685902	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR1	8776	broad.mit.edu	37	X	149901077	149901077	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTTP	4547	broad.mit.edu	37	4	100532334	100532334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC13	56667	broad.mit.edu	37	3	124641011	124641011	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8998800	8998800	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9019327	9019327	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9027157	9027157	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9058698	9058698	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9059073	9059073	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9070836	9070836	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9075173	9075173	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9082767	9082767	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100676223	100676223	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100679089	100679089	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100679784	100679784	+	Missense_Mutation	SNP	C	A	A	rs146239691		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100680500	100680500	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100683216	100683216	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100683456	100683456	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1088725	1088725	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113562990	113562990	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42811689	42811689	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42767731	42767731	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3235987	3235987	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47360129	47360129	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47361022	47361023	+	Intron	DNP	TG	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47361429	47361429	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBPAP	84073	broad.mit.edu	37	17	48600956	48600956	+	Splice_Site	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48443858	48443858	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108178190	108178190	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108189605	108189605	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10411638	10411638	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10430130	10430130	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10441144	10441144	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10352302	10352302	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23867979	23867979	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23889040	23889040	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYNN	55892	broad.mit.edu	37	3	169492398	169492398	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16818321	16818321	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26219709	26219709	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26243965	26243965	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26457663	26457663	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26465558	26465558	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128351140	128351140	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24394530	24394530	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69881444	69881444	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP1	9683	broad.mit.edu	37	16	48576960	48576960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA11	84779	broad.mit.edu	37	4	80246593	80246593	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89916046	89916046	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAF1	92345	broad.mit.edu	37	4	164061309	164061309	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGLU	4669	broad.mit.edu	37	17	40695601	40695601	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101714351	101714351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92927045	92927045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS2	79731	broad.mit.edu	37	11	78152060	78152061	+	Intron	DNP	GG	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201763728	201763728	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15615813	15615813	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145281866	145281866	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145563173	145563173	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16894765	16894765	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16901192	16901192	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCALD	83988	broad.mit.edu	37	8	102705114	102705114	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22881254	22881254	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134073739	134073739	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG	64151	broad.mit.edu	37	4	17819644	17819644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133539711	133539711	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71186020	71186020	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46281260	46281260	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124824778	124824778	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124832360	124832360	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00169	400508	broad.mit.edu	37	16	21328462	21328462	+	RNA	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00173	100287569	broad.mit.edu	37	12	116972455	116972455	+	RNA	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160326401	160326401	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119114991	119114991	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115767068	115767068	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115997603	115997603	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152466264	152466264	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152507313	152507313	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK11	79858	broad.mit.edu	37	3	130962248	130962248	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK5	341676	broad.mit.edu	37	13	52693477	52693477	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21250989	21250989	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21581833	21581833	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO2	81831	broad.mit.edu	37	16	47117419	47117419	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD1	4760	broad.mit.edu	37	2	182542478	182542478	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29587341	29587341	+	Intron	SNP	G	T	T	rs17881285	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204931404	204931404	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68156594	68156594	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIC	4782	broad.mit.edu	37	19	3381731	3381731	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIC	4782	broad.mit.edu	37	19	3381733	3381733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIZ	64332	broad.mit.edu	37	3	101574011	101574011	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYC	4802	broad.mit.edu	37	1	41236592	41236592	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC2	133308	broad.mit.edu	37	4	103964408	103964408	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHP2L1	4809	broad.mit.edu	37	22	42072750	42072750	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236205613	236205613	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51228417	51228417	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124676569	124676570	+	Intron	DNP	CC	TA	TA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	125139561	125139561	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63777550	63777550	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAPL	222698	broad.mit.edu	37	6	28227250	28227250	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173322611	173322611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65084126	65084126	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54314336	54314336	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56424587	56424587	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587718	247587718	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587916	247587916	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56370569	56370569	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56226411	56226412	+	Intron	DNP	CC	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMD3	51068	broad.mit.edu	37	3	160968014	160968014	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMI	9111	broad.mit.edu	37	2	152132019	152132019	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMNAT1	64802	broad.mit.edu	37	1	10035810	10035810	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15210430	15210430	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR2	56923	broad.mit.edu	37	5	151784225	151784225	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43700438	43700438	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD1	10392	broad.mit.edu	37	7	30490920	30490920	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL10	79954	broad.mit.edu	37	2	10729817	10729817	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP2	4839	broad.mit.edu	37	12	6669388	6669388	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP58	51602	broad.mit.edu	37	2	203156054	203156054	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162337164	162337164	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117681140	117681140	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26116678	26116678	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120461117	120461117	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32163899	32163899	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32187892	32187892	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	26917470	26917470	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOV	4856	broad.mit.edu	37	8	120430235	120430235	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX3	50508	broad.mit.edu	37	6	155728185	155728185	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR2	2832	broad.mit.edu	37	20	62738221	62738221	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	72897709	72897709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	72994430	72994430	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132411691	132411691	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPLOC4	55666	broad.mit.edu	37	17	79573732	79573732	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32712561	32712561	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34889208	34889208	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTX1	4884	broad.mit.edu	37	17	78444785	78444785	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30327199	30327199	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1I3	9970	broad.mit.edu	37	1	161205726	161205726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A3	8013	broad.mit.edu	37	9	102607124	102607124	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107801019	107801019	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG2	9542	broad.mit.edu	37	5	139231342	139231342	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84118550	84118550	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84498377	84498377	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50463973	50463973	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78709848	78709848	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1A	84618	broad.mit.edu	37	1	40128985	40128985	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTF3	4908	broad.mit.edu	37	12	5603685	5603685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132016316	132016316	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107979327	107979327	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG2	84628	broad.mit.edu	37	9	135114692	135114692	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156846197	156846197	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCKS1	64710	broad.mit.edu	37	1	205688745	205688745	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134039265	134039265	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP35	129401	broad.mit.edu	37	2	183993024	183993024	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP62CL	54830	broad.mit.edu	37	X	106396497	106396497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102343779	102343779	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXNL1	115861	broad.mit.edu	37	19	17571646	17571646	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228466354	228466354	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228481254	228481254	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71066320	71066320	+	Splice_Site	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF4	146852	broad.mit.edu	37	17	8249255	8249255	+	3'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183522166	183522166	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183676381	183676381	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44713896	44713896	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102296165	102296165	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53608516	53608516	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123900553	123900553	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123901089	123901089	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10X1	128367	broad.mit.edu	37	1	158549326	158549326	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107361006	107361006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C8	138802	broad.mit.edu	37	9	107331853	107331853	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978156	247978156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978337	247978337	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1D4	8385	broad.mit.edu	37	17	2966341	2966341	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128744	248128744	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B3	442184	broad.mit.edu	37	6	29054080	29054080	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248099960	248099960	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185723	248185723	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248186062	248186062	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L1P	26247	broad.mit.edu	37	1	248153729	248153729	+	5'UTR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248344254	248344254	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487667	248487667	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248525501	248525501	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248525656	248525656	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551682	248551682	+	Missense_Mutation	SNP	C	T	T	rs141134612	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A1	4994	broad.mit.edu	37	17	3195709	3195709	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C16	219428	broad.mit.edu	37	11	55339563	55339563	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D10	390197	broad.mit.edu	37	11	59245584	59245584	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D2	124538	broad.mit.edu	37	17	56247902	56247902	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K14	122740	broad.mit.edu	37	14	20482658	20482658	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K2	390431	broad.mit.edu	37	14	20345226	20345226	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528892	20528892	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216396	20216396	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51S1	119692	broad.mit.edu	37	11	4869754	4869754	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N2	390077	broad.mit.edu	37	11	5842333	5842333	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AS1	219447	broad.mit.edu	37	11	55798679	55798679	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B17	219965	broad.mit.edu	37	11	58126446	58126446	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B3	441608	broad.mit.edu	37	11	58170886	58170886	+	5'Flank	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55761205	55761205	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55761253	55761253	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188929	98188929	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98189049	98189049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K2	402135	broad.mit.edu	37	3	98216531	98216531	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98073305	98073305	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579417	55579417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M1	390168	broad.mit.edu	37	11	56380835	56380835	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T1	390155	broad.mit.edu	37	11	56043987	56043987	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B2	389090	broad.mit.edu	37	2	240969557	240969557	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N2	81442	broad.mit.edu	37	1	158746535	158746535	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6Y1	391112	broad.mit.edu	37	1	158516969	158516969	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E5P	219445	broad.mit.edu	37	11	55747441	55747441	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7G1	125962	broad.mit.edu	37	19	9226195	9226195	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B3	390271	broad.mit.edu	37	11	124266395	124266395	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310761	124310761	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55873273	55873273	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55873419	55873419	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890240	55890240	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56127765	56127765	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56127775	56127775	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55904371	55904371	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55905109	55905109	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9I1	219954	broad.mit.edu	37	11	57886367	57886367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9Q2	219957	broad.mit.edu	37	11	57958771	57958771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC5L	5001	broad.mit.edu	37	7	103808843	103808843	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179247688	179247688	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSGEP	55644	broad.mit.edu	37	14	20917122	20917122	+	Splice_Site	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD4	54726	broad.mit.edu	37	4	146065662	146065662	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTX1	5013	broad.mit.edu	37	2	63283359	63283359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29604465	29604465	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25832986	25832986	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSR1	9943	broad.mit.edu	37	3	38293723	38293723	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY10	27334	broad.mit.edu	37	X	78216452	78216452	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY1	5028	broad.mit.edu	37	3	152553901	152553901	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HTM	54681	broad.mit.edu	37	3	49044234	49044234	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25671349	25671349	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN1	29993	broad.mit.edu	37	6	34496380	34496380	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI2	11240	broad.mit.edu	37	1	17396687	17396687	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17586065	17586065	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI4	23569	broad.mit.edu	37	1	17674519	17674519	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAH	5053	broad.mit.edu	37	12	103249050	103249050	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9561532	9561532	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112705122	112705122	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD7	11044	broad.mit.edu	37	5	6742603	6742603	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLG	64895	broad.mit.edu	37	2	61010339	61010339	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176564576	176564576	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176668331	176668331	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176679023	176679023	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176679225	176679225	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176769207	176769207	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	118974272	118974272	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25451253	25451253	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	161969909	161969909	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162394430	162394430	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARM1	25849	broad.mit.edu	37	4	75937772	75937772	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP9	83666	broad.mit.edu	37	3	122278545	122278545	+	5'UTR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44587858	44587858	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127253161	127253161	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127253428	127253428	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX5	5079	broad.mit.edu	37	9	36882089	36882089	+	Silent	SNP	C	A	A	rs145283614		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCA	5095	broad.mit.edu	37	13	100925601	100925601	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134073017	134073017	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134076163	134076163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91091046	91091046	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91131875	91131875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91369067	91369067	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11Y	83259	broad.mit.edu	37	Y	5441470	5441470	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55566950	55566950	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138610	56138610	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56360517	56360517	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58208014	58208014	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58240910	58240910	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138449939	138449939	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138451090	138451090	+	Missense_Mutation	SNP	A	G	G	rs143055456	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH1	5097	broad.mit.edu	37	5	141236969	141236969	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140180780	140180780	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140476226	140476226	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140552728	140552728	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140745190	140745190	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA7	56108	broad.mit.edu	37	5	140763276	140763276	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA7	56108	broad.mit.edu	37	5	140764644	140764644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140773763	140773763	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB7	56099	broad.mit.edu	37	5	140799740	140799740	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF5	84333	broad.mit.edu	37	10	93011157	93011157	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56138753	56138753	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82580348	82580348	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82585749	82585749	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47768970	47768970	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233296137	233296138	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PC	5091	broad.mit.edu	37	11	66638672	66638672	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31877505	31877505	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72290403	72290403	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20705460	20705460	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144857556	144857556	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	58273273	58273273	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149278102	149278102	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76704900	76704900	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76707810	76707810	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76721722	76721722	+	Splice_Site	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	550517	550517	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFD	80310	broad.mit.edu	37	11	103780531	103780531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA2	5161	broad.mit.edu	37	4	96762029	96762029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM7	9260	broad.mit.edu	37	5	176917952	176917952	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPR	55066	broad.mit.edu	37	16	70154664	70154664	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15111246	15111246	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDXDC1	23042	broad.mit.edu	37	16	15222081	15222081	+	Intron	SNP	T	A	A	rs66756228		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73433421	73433421	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73438909	73438909	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI3	246330	broad.mit.edu	37	11	66235585	66235585	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PES1	23481	broad.mit.edu	37	22	30974931	30974931	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB4	5210	broad.mit.edu	37	3	48563006	48563006	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGA5	5222	broad.mit.edu	37	11	61017555	61017555	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGC	5225	broad.mit.edu	37	6	41704543	41704543	+	3'UTR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153274952	153274952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21A	51317	broad.mit.edu	37	11	46105753	46105753	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71732163	71732163	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21152932	21152932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3IP1	113791	broad.mit.edu	37	22	31688260	31688260	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	77026748	77026748	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142829214	142829214	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111554147	111554147	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47944149	47944149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81248838	81248838	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2160773	2160773	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88959346	88959346	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88989119	88989119	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDREJ	10343	broad.mit.edu	37	22	46655703	46655703	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110448582	110448582	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110464485	110464485	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110497320	110497320	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51619799	51619799	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2A	5320	broad.mit.edu	37	1	20304510	20304510	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2D	26279	broad.mit.edu	37	1	20440630	20440630	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G2F	64600	broad.mit.edu	37	1	20466628	20466628	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G3	50487	broad.mit.edu	37	22	31533819	31533819	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G3	50487	broad.mit.edu	37	22	31534755	31534755	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4F	255189	broad.mit.edu	37	15	42436333	42436333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160798647	160798647	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8639329	8639329	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8720964	8720964	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9402202	9402202	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9417852	9417852	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242451549	242451549	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA5	54477	broad.mit.edu	37	12	19512243	19512244	+	Intron	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43970132	43970132	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK2	10769	broad.mit.edu	37	5	57752456	57752456	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD2	5352	broad.mit.edu	37	3	145809634	145809634	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR4	57088	broad.mit.edu	37	3	145912942	145912942	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208213453	208213453	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153688868	153688868	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131865426	131865426	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131872379	131872379	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB2	23654	broad.mit.edu	37	22	50719226	50719226	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118199464	118199464	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118231258	118231258	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA6	10908	broad.mit.edu	37	19	7605696	7605696	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA7	375775	broad.mit.edu	37	9	140358738	140358738	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODN	127435	broad.mit.edu	37	1	53541610	53541610	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POFUT2	23275	broad.mit.edu	37	21	46689913	46689913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1E	64425	broad.mit.edu	37	9	37489454	37489454	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7416791	7416791	+	Silent	SNP	C	A	A	rs112370068	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53104242	53104242	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99169910	99169910	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POPDC2	64091	broad.mit.edu	37	3	119367552	119367552	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154834	38154834	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43211972	43211972	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832240	130832240	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39500316	39500316	+	Splice_Site	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAP2C	8612	broad.mit.edu	37	19	288086	288086	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81762455	81762455	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81768261	81768261	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA3	8541	broad.mit.edu	37	19	49632191	49632191	+	Silent	SNP	G	T	T	rs140179139	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA4	8497	broad.mit.edu	37	1	203008326	203008326	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102469323	102469323	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1E	22843	broad.mit.edu	37	17	57046780	57046780	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1G	5496	broad.mit.edu	37	2	27607565	27607565	+	Missense_Mutation	SNP	G	A	A	rs150808424		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPOX	5498	broad.mit.edu	37	1	161138212	161138212	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15A	23645	broad.mit.edu	37	19	49376588	49376588	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204379011	204379011	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204379097	204379097	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113519998	113519998	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94750039	94750039	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146030091	146030091	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R4	5524	broad.mit.edu	37	9	131885481	131885481	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5C	5527	broad.mit.edu	37	14	102384058	102384058	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3CA	5530	broad.mit.edu	37	4	102251587	102251587	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12921265	12921265	+	Missense_Mutation	SNP	G	T	T	rs151184374	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB4	5545	broad.mit.edu	37	12	11244935	11244935	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM10	56980	broad.mit.edu	37	11	129804796	129804796	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43223078	43223078	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509759	23509759	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23526486	23526486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIC285	85441	broad.mit.edu	37	20	62199965	62199965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57398091	57398091	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6498661	6498661	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD2	25865	broad.mit.edu	37	19	47195022	47195022	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKRA	8575	broad.mit.edu	37	2	179315274	179315274	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93605239	93605240	+	Nonsense_Mutation	DNP	CC	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4	9128	broad.mit.edu	37	9	116048719	116048719	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1578503	1578503	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPH2	5961	broad.mit.edu	37	6	42689396	42689396	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1	5631	broad.mit.edu	37	X	106890894	106890894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR11	55771	broad.mit.edu	37	17	57262850	57262850	+	Missense_Mutation	SNP	G	T	T	rs140473884		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170705133	170705133	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS12	8492	broad.mit.edu	37	4	119253021	119253021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS16	10279	broad.mit.edu	37	6	27222785	27222785	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142460405	142460405	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS21	10942	broad.mit.edu	37	16	2870830	2870830	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS23	11098	broad.mit.edu	37	11	86519409	86519409	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS35	167681	broad.mit.edu	37	6	84233730	84233730	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS48	345062	broad.mit.edu	37	4	152200230	152200230	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSSL1	400668	broad.mit.edu	37	19	694911	694911	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSSL1	400668	broad.mit.edu	37	19	694913	694913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79321692	79321692	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79325636	79325636	+	Silent	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD	5662	broad.mit.edu	37	10	104170620	104170620	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227073439	227073439	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43699272	43699272	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43520326	43520326	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43268342	43268342	+	Silent	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43766394	43766394	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC4	5704	broad.mit.edu	37	19	40480540	40480540	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD2	5708	broad.mit.edu	37	3	184022015	184022015	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD2	5708	broad.mit.edu	37	3	184024532	184024532	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD7	5713	broad.mit.edu	37	16	74338330	74338330	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54115801	54115801	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99022694	99022694	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99050156	99050156	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH1	5727	broad.mit.edu	37	9	98244224	98244224	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11586583	11586583	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97311866	97311866	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	78958396	78958396	+	5'UTR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	78958528	78958528	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGR1	22949	broad.mit.edu	37	9	114359635	114359635	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27295394	27295394	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK7	5754	broad.mit.edu	37	6	43109784	43109784	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87643512	87643512	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN18	26469	broad.mit.edu	37	2	131117299	131117299	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN3	5774	broad.mit.edu	37	9	112195398	112195398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18750585	18750585	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18750644	18750644	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198665832	198665832	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198668730	198668730	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8341569	8341569	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8518099	8518099	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	61975455	61975456	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55713360	55713360	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8252603	8252603	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71094917	71094917	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40710507	40710507	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121608163	121608163	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PURB	5814	broad.mit.edu	37	7	44924058	44924058	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP2	5822	broad.mit.edu	37	21	45535470	45535470	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52232456	52232456	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGB	5834	broad.mit.edu	37	20	25262803	25262803	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSOX1	5768	broad.mit.edu	37	1	180159623	180159623	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB28	9364	broad.mit.edu	37	4	13370268	13370268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB2A	5862	broad.mit.edu	37	8	61484660	61484660	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174274333	174274333	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76255770	76255770	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD50	10111	broad.mit.edu	37	5	131895051	131895051	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD54L	8438	broad.mit.edu	37	1	46725742	46725742	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4874576	4874576	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAET1E	135250	broad.mit.edu	37	6	150210584	150210584	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36596039	36596039	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36264991	36264991	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36301637	36301637	+	5'UTR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANGAP1	5905	broad.mit.edu	37	22	41645438	41645438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173825890	173825890	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130828276	130828276	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARA	5914	broad.mit.edu	37	17	38510598	38510598	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA2	5922	broad.mit.edu	37	3	141230941	141230941	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114766491	114766491	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF4	83937	broad.mit.edu	37	10	45487493	45487493	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBL1	5933	broad.mit.edu	37	20	35661274	35661274	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114374902	114374902	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM24	221662	broad.mit.edu	37	6	17292055	17292055	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM26	64062	broad.mit.edu	37	13	79929484	79929484	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135958873	135958873	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCN3	57333	broad.mit.edu	37	19	50031594	50031594	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RD3	343035	broad.mit.edu	37	1	211654573	211654573	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36117030	36117030	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79386508	79386508	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120342273	120342273	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103183359	103183359	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103205894	103205894	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17070379	17070379	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO2	25996	broad.mit.edu	37	11	114315245	114315245	+	Intron	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC3	5983	broad.mit.edu	37	13	34395229	34395229	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC4	5984	broad.mit.edu	37	3	186515344	186515344	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	176105681	176105681	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD3	55159	broad.mit.edu	37	16	74678502	74678502	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD2	93587	broad.mit.edu	37	4	100470252	100470252	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD1	400966	broad.mit.edu	37	2	88056426	88056426	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107049492	107049492	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108488503	108488503	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108494961	108494961	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS11	8786	broad.mit.edu	37	16	325382	325382	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS17	26575	broad.mit.edu	37	6	153332638	153332638	+	3'UTR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	100994230	100994230	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163122550	163122550	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163131821	163131821	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240933341	240933341	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241093897	241093897	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEB	6009	broad.mit.edu	37	7	151200535	151200535	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104949022	104949022	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43385559	43385559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43385807	43385807	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66101539	66101539	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40503402	40503402	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLIM	51132	broad.mit.edu	37	X	73812542	73812542	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND1	55005	broad.mit.edu	37	6	151766404	151766404	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RND3	390	broad.mit.edu	37	2	151331604	151331604	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144A	9781	broad.mit.edu	37	2	7164389	7164389	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25341412	25341412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19B	127544	broad.mit.edu	37	1	33413741	33413741	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF20	56254	broad.mit.edu	37	9	104319843	104319843	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78319272	78319272	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5680851	5680851	+	Missense_Mutation	SNP	T	A	A	rs141635295		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF32	140545	broad.mit.edu	37	7	156437527	156437527	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF43	54894	broad.mit.edu	37	17	56440118	56440118	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124742353	124742353	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124765294	124765294	+	Intron	SNP	C	A	A	rs76547251	byFrequency;by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROM1	6094	broad.mit.edu	37	11	62380969	62380969	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486634	94486634	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94493208	94493208	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117631202	117631202	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117706999	117706999	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467868	10467868	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL4	6124	broad.mit.edu	37	15	66797088	66797088	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83319945	83319945	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83375044	83375044	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83389786	83389786	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83411040	83411040	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPSAP58	388524	broad.mit.edu	37	19	23973638	23973638	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126081500	126081500	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99153593	99153593	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1B	23076	broad.mit.edu	37	21	45111287	45111287	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSAD1	55316	broad.mit.edu	37	17	48557178	48557178	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100752704	100752704	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62294070	62294070	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP1	132112	broad.mit.edu	37	3	186915621	186915621	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67741202	67741202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY1	80230	broad.mit.edu	37	5	179023446	179023446	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93074710	93074710	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45479973	45479973	+	Intron	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159568212	159568212	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32360787	32360787	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39071079	39071079	+	Missense_Mutation	SNP	C	A	A	rs118192181		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39077919	39077919	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237550647	237550647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237660118	237660118	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237663982	237663982	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237732489	237732489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237758850	237758850	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237777418	237777418	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237780850	237780850	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237906994	237906994	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237944872	237944872	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947327	237947327	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34156415	34156415	+	Intron	SNP	C	A	A	rs59611174	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR2	9294	broad.mit.edu	37	19	10334440	10334440	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAC3D1	29901	broad.mit.edu	37	11	64812109	64812109	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23906719	23906719	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23939434	23939434	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23942683	23942683	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAG	6295	broad.mit.edu	37	2	234229371	234229371	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD7	344658	broad.mit.edu	37	3	169650453	169650453	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92731987	92731987	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92733814	92733814	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92734749	92734749	+	Missense_Mutation	SNP	C	A	A	rs148603551		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMM50	25813	broad.mit.edu	37	22	44364491	44364491	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15889139	15889139	+	Intron	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP130	79595	broad.mit.edu	37	2	128775444	128775444	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108938916	108938916	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SC65	10609	broad.mit.edu	37	17	39959703	39959703	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAI	286205	broad.mit.edu	37	9	127730777	127730777	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG5	6447	broad.mit.edu	37	15	32976947	32976947	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38768446	38768446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38781150	38781150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38888221	38888221	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38888709	38888709	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38888711	38888711	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166172032	166172032	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166172034	166172034	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62025346	62025346	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167279698	167279698	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29980513	29980513	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN3	79634	broad.mit.edu	37	2	175292567	175292567	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE1	80274	broad.mit.edu	37	22	43610086	43610086	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE1	80274	broad.mit.edu	37	22	43610369	43610369	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139297255	139297255	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4007027	4007027	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4213692	4213692	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71394430	71394430	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23A	10484	broad.mit.edu	37	14	39512155	39512155	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23A	10484	broad.mit.edu	37	14	39524291	39524291	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23IP	11196	broad.mit.edu	37	10	121671606	121671606	+	Silent	SNP	G	T	T	rs146017364		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83748691	83748691	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49284854	49284854	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13971225	13971225	+	5'UTR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L3	23231	broad.mit.edu	37	4	25780789	25780789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169582414	169582414	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84636061	84636061	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84636063	84636063	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84642165	84642165	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84658587	84658587	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84697561	84697561	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3F	6405	broad.mit.edu	37	3	50211746	50211746	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	91994133	91994133	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4F	10505	broad.mit.edu	37	2	74901548	74901548	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9066613	9066613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48062872	48062872	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT14	346288	broad.mit.edu	37	7	55912145	55912145	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392511	30392511	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94913019	94913019	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94914523	94914523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA3	12	broad.mit.edu	37	14	95089859	95089859	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB6	5269	broad.mit.edu	37	6	2956008	2956008	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB9	5272	broad.mit.edu	37	6	2900746	2900746	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135204107	135204107	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26688935	26688935	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6	124925	broad.mit.edu	37	17	27306826	27306826	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70560648	70560648	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70595652	70595652	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B4	10262	broad.mit.edu	37	1	149895855	149895855	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPA1	653509	broad.mit.edu	37	10	81371568	81371568	+	5'UTR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67105430	67105430	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77471194	77471194	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGOL2	151246	broad.mit.edu	37	2	201437779	201437779	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPP1	81537	broad.mit.edu	37	14	64152941	64152941	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL2	6456	broad.mit.edu	37	9	17793602	17793602	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51117880	51117880	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49127011	49127011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49217220	49217220	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72842268	72842268	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT1	54847	broad.mit.edu	37	3	113330062	113330062	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117058097	117058097	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117058278	117058278	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC12	89858	broad.mit.edu	37	19	52000534	52000534	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3673254	3673254	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51961666	51961666	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1903195	1903195	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164709192	164709192	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164710132	164710132	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164710186	164710186	+	Splice_Site	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKA3	221150	broad.mit.edu	37	13	21742417	21742417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103703648	103703648	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103710528	103710528	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127487036	127487036	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56936384	56936384	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A6	9990	broad.mit.edu	37	15	34536239	34536239	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1083818	1083818	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1088990	1088990	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135392916	135392916	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43311243	43311244	+	Intron	DNP	TG	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99364135	99364135	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121631823	121631823	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A4	121260	broad.mit.edu	37	12	129294610	129294610	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A2	6567	broad.mit.edu	37	X	73641466	73641466	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A7	9194	broad.mit.edu	37	12	60168526	60168526	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63057612	63057612	+	5'UTR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38317614	38317614	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A3	6581	broad.mit.edu	37	6	160858107	160858107	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A14	9016	broad.mit.edu	37	X	129492640	129492640	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A14	9016	broad.mit.edu	37	X	129499695	129499695	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A20	788	broad.mit.edu	37	3	48929495	48929495	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A31	83447	broad.mit.edu	37	4	128694753	128694753	+	3'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A40	55972	broad.mit.edu	37	7	87483519	87483519	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A43	203427	broad.mit.edu	37	X	118544216	118544216	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107432339	107432339	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107340520	107340520	+	Intron	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A13	114134	broad.mit.edu	37	12	40153759	40153759	+	3'UTR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A9	56606	broad.mit.edu	37	4	10027569	10027569	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35E2	9906	broad.mit.edu	37	1	1666259	1666259	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A1	206358	broad.mit.edu	37	5	150858948	150858948	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A10	124565	broad.mit.edu	37	17	79233989	79233989	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84070307	84070307	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18242230	18242230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A8	64116	broad.mit.edu	37	4	103188931	103188931	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A2	6520	broad.mit.edu	37	11	62655812	62655812	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A3	29015	broad.mit.edu	37	11	57177518	57177518	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108145381	108145381	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75862336	75862336	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162821590	162821590	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110734571	110734571	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20636271	20636271	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20636376	20636376	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20674102	20674102	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170244607	170244607	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A7	9056	broad.mit.edu	37	14	23282657	23282657	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40655707	40655707	+	Missense_Mutation	SNP	C	A	A	rs151189284		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40656124	40656124	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111901144	111901144	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111997789	111997789	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103300762	103300762	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103141365	103141365	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135095604	135095604	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143214218	143214218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21377550	21377550	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133667911	133667911	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70744859	70744859	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN11	91607	broad.mit.edu	37	17	33687454	33687454	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20541057	20541057	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20543209	20543209	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168151447	168151447	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168176693	168176693	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84454950	84454951	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164906357	164906357	+	Silent	SNP	G	T	T	rs146211129		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142718172	142718172	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88329046	88329046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86368425	86368425	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD3	4088	broad.mit.edu	37	15	67473677	67473677	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD9	4093	broad.mit.edu	37	13	37496635	37496635	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAP1	60682	broad.mit.edu	37	6	71464617	71464617	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2110342	2110342	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11136921	11136921	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106891871	106891871	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70418877	70418877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88390656	88390656	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88409967	88409967	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRK	54861	broad.mit.edu	37	3	43389720	43389720	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96970651	96970651	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPB	6628	broad.mit.edu	37	20	2443698	2443698	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25154990	25154990	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX15	29907	broad.mit.edu	37	11	64802239	64802239	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX15	29907	broad.mit.edu	37	11	64803193	64803193	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX30	401548	broad.mit.edu	37	9	115600941	115600941	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX4	8723	broad.mit.edu	37	3	125223463	125223463	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX9	51429	broad.mit.edu	37	6	158358615	158358615	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107824904	107824904	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOHLH1	402381	broad.mit.edu	37	9	138589372	138589372	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOHLH2	54937	broad.mit.edu	37	13	36767938	36767938	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SON	6651	broad.mit.edu	37	21	34924752	34924752	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108337101	108337101	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108447971	108447971	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106960943	106960943	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106974285	106974285	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121495847	121495847	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39239411	39239411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23818322	23818322	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231175345	231175345	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP2	6668	broad.mit.edu	37	17	45993740	45993740	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA1	81833	broad.mit.edu	37	6	88773879	88773879	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118512669	118512669	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118727642	118727642	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG1	6674	broad.mit.edu	37	8	101195688	101195688	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG1	6674	broad.mit.edu	37	8	101232595	101232595	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG6	9576	broad.mit.edu	37	10	22680766	22680766	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAM1	6677	broad.mit.edu	37	7	123594379	123594379	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN2	494119	broad.mit.edu	37	X	142803913	142803913	+	Translation_Start_Site	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARC	6678	broad.mit.edu	37	5	151054176	151054176	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA17	128153	broad.mit.edu	37	1	217822201	217822201	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA19	219938	broad.mit.edu	37	11	133714354	133714354	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753979	35753979	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35792438	35792438	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	229046274	229046274	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINLW1	57119	broad.mit.edu	37	20	44171541	44171541	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE2	84501	broad.mit.edu	37	16	89911689	89911689	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCD1	90853	broad.mit.edu	37	1	32259395	32259395	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR1A	6698	broad.mit.edu	37	1	152957896	152957896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY2	10253	broad.mit.edu	37	13	80911103	80911103	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY2	10253	broad.mit.edu	37	13	80911650	80911650	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158585297	158585297	+	Intron	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158593041	158593041	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596725	158596725	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158613332	158613332	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158645888	158645888	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158647625	158647625	+	Splice_Site	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158656230	158656230	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131346262	131346262	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131356324	131356324	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	40995976	40995976	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQLE	6713	broad.mit.edu	37	8	126015709	126015709	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30723384	30723384	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30748500	30748501	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRC	6714	broad.mit.edu	37	20	36028466	36028466	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK2	6733	broad.mit.edu	37	7	104767553	104767553	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRD	402055	broad.mit.edu	37	22	26882066	26882066	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	27957793	27957793	+	3'UTR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH3	54961	broad.mit.edu	37	11	67077689	67077689	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149483249	149483249	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149500790	149500790	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149509187	149509187	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149522334	149522334	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR4	6754	broad.mit.edu	37	20	23017238	23017238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52677375	52677375	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52655289	52655289	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	77093074	77093074	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA4	7903	broad.mit.edu	37	5	100231301	100231301	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA6	338596	broad.mit.edu	37	10	17369028	17369028	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104069754	104069754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104105217	104105217	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136183880	136183880	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBPL1	57559	broad.mit.edu	37	10	90672775	90672775	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBPL1	57559	broad.mit.edu	37	10	90703677	90703677	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68443021	68443021	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD8	9754	broad.mit.edu	37	X	67937280	67937280	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191937712	191937712	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC2	8614	broad.mit.edu	37	5	172750374	172750374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC2	8614	broad.mit.edu	37	5	172753012	172753012	+	Silent	SNP	C	T	T	rs145449570	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171488319	171488319	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219538431	219538431	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219566748	219566748	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOX2	56977	broad.mit.edu	37	4	184930348	184930348	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX4	6810	broad.mit.edu	37	16	31046343	31046343	+	Silent	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	121126217	121126217	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT4A1	25830	broad.mit.edu	37	22	44237718	44237718	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT4A1	25830	broad.mit.edu	37	22	44237804	44237804	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF2	25870	broad.mit.edu	37	7	56146138	56146138	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48046855	48046855	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPV3L1	6832	broad.mit.edu	37	10	70945879	70945879	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113132270	113132270	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113169032	113169032	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29779864	29779864	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29784046	29784046	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29812503	29812503	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109316512	109316512	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	33327485	33327485	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64653253	64653253	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40853935	40853935	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7441797	7441797	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39822857	39822857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123988756	123988756	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC3	10460	broad.mit.edu	37	4	1742434	1742434	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32634689	32634689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TALDO1	6888	broad.mit.edu	37	11	764307	764307	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118671561	118671561	+	Silent	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150469316	150469316	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R1	80835	broad.mit.edu	37	1	6639186	6639186	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R3	83756	broad.mit.edu	37	1	1268139	1268139	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R38	5726	broad.mit.edu	37	7	141672757	141672757	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R39	259285	broad.mit.edu	37	7	142881157	142881157	+	Missense_Mutation	SNP	G	A	A	rs150355894		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN2	9797	broad.mit.edu	37	3	10291003	10291003	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D14	57533	broad.mit.edu	37	4	6969231	6969231	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D21	161514	broad.mit.edu	37	15	74179886	74179886	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D26	353149	broad.mit.edu	37	17	15641674	15641674	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D26	353149	broad.mit.edu	37	17	15641927	15641927	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60342173	60342173	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85446572	85446572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX1	6899	broad.mit.edu	37	22	19751664	19751664	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114823367	114823367	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3B	51224	broad.mit.edu	37	18	44560607	44560607	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3B	51224	broad.mit.edu	37	18	44560667	44560667	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1A	8115	broad.mit.edu	37	14	96178511	96178511	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCOF1	6949	broad.mit.edu	37	5	149777727	149777727	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11L1	55346	broad.mit.edu	37	11	33065296	33065296	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN3	26123	broad.mit.edu	37	10	97444227	97444227	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD3	81550	broad.mit.edu	37	13	61084166	61084166	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR2	9895	broad.mit.edu	37	14	102891653	102891653	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR2	9895	broad.mit.edu	37	14	102964478	102964478	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27180369	27180369	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20845891	20845891	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20872001	20872001	+	Missense_Mutation	SNP	C	A	A	rs34770935	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70332962	70332962	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX10	54881	broad.mit.edu	37	9	103084051	103084051	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30705979	30705979	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50803856	50803856	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50686891	50686891	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50696781	50696781	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFIP11	24144	broad.mit.edu	37	22	26902740	26902740	+	Splice_Site	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFR2	7036	broad.mit.edu	37	7	100226011	100226011	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133478117	133478117	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGDS	23483	broad.mit.edu	37	13	95235491	95235491	+	Splice_Site	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB1I1	7041	broad.mit.edu	37	16	31485036	31485036	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554096	85554096	+	Silent	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133885314	133885314	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134029979	134029979	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134146934	134146934	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169629714	169629714	+	Missense_Mutation	SNP	C	T	T	rs61736310		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS3	7059	broad.mit.edu	37	1	155165670	155165670	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEMIS	387357	broad.mit.edu	37	6	128040881	128040881	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC4	10189	broad.mit.edu	37	17	79846107	79846107	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRB	7068	broad.mit.edu	37	3	24164475	24164475	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11581034	11581034	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84202721	84202721	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR10	81793	broad.mit.edu	37	4	38774993	38774993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF3	51768	broad.mit.edu	37	12	27129254	27129254	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM6	7009	broad.mit.edu	37	12	50152023	50152023	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2560468	2560468	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC6	11322	broad.mit.edu	37	17	76116639	76116639	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO4	255104	broad.mit.edu	37	1	20096969	20096969	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO5A	145942	broad.mit.edu	37	15	38228669	38228669	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED9	54732	broad.mit.edu	37	5	177019188	177019188	+	5'Flank	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED9	54732	broad.mit.edu	37	5	177019267	177019267	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEFF2	23671	broad.mit.edu	37	2	193048988	193048988	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44374540	44374540	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM130	222865	broad.mit.edu	37	7	98452969	98452969	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32956077	32956077	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM150C	441027	broad.mit.edu	37	4	83416289	83416289	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176B	28959	broad.mit.edu	37	7	150490383	150490383	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176B	28959	broad.mit.edu	37	7	150491002	150491002	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM184A	202915	broad.mit.edu	37	7	1589783	1589783	+	Silent	SNP	G	T	T	rs139449337	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15433788	15433788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130761821	130761821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM211	255349	broad.mit.edu	37	22	25334188	25334188	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM25	84866	broad.mit.edu	37	11	118404498	118404498	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM40	55287	broad.mit.edu	37	3	12777078	12777078	+	Missense_Mutation	SNP	G	A	A	rs147042676		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM57	55219	broad.mit.edu	37	1	25824928	25824928	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133771029	133771029	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM74	157753	broad.mit.edu	37	8	109665132	109665132	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM90B	79953	broad.mit.edu	37	20	24646208	24646208	+	3'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMF1	7110	broad.mit.edu	37	3	69084042	69084042	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68829211	68829211	+	5'UTR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68708237	68708237	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19698799	19698799	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS4	56649	broad.mit.edu	37	11	117979646	117979646	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101266800	101266800	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117838396	117838396	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP2	7127	broad.mit.edu	37	14	103599937	103599937	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC18	84629	broad.mit.edu	37	7	5410699	5410699	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC18	84629	broad.mit.edu	37	7	5427458	5427458	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76079273	76079273	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175306627	175306627	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175331703	175331703	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175334111	175334111	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175372526	175372526	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR3A	64222	broad.mit.edu	37	1	179054768	179054768	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577096	7577096	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP63	8626	broad.mit.edu	37	3	189587113	189587113	+	Frame_Shift_Del	DEL	C	-	-	rs148052765		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144150896	144150896	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM1	7168	broad.mit.edu	37	15	63363340	63363340	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM4	7171	broad.mit.edu	37	19	16199838	16199838	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1459997	1459997	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPRG1	285386	broad.mit.edu	37	3	188956442	188956442	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10941907	10941907	+	Splice_Site	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971741	10971741	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10996118	10996118	+	RNA	SNP	C	T	T	rs145516119	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2B	6434	broad.mit.edu	37	3	185655553	185655553	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF1	7185	broad.mit.edu	37	9	123685979	123685979	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118006189	118006189	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123698856	123698856	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRH	7200	broad.mit.edu	37	3	129695927	129695927	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM11	81559	broad.mit.edu	37	1	228589724	228589724	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16	10626	broad.mit.edu	37	17	15516139	15516139	+	Splice_Site	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	119998125	119998125	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140397213	140397213	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM67	440730	broad.mit.edu	37	1	231344888	231344888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189061043	189061043	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189061102	189061102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068295	189068295	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068532	189068532	+	3'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189012860	189012860	+	Silent	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189026199	189026199	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230664108	230664108	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	916038	916038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRO	7216	broad.mit.edu	37	X	54956381	54956381	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111155894	111155894	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2432703	2432703	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77411735	77411735	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77442833	77442833	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234878910	234878910	+	Missense_Mutation	SNP	C	A	A	rs17862932	byFrequency	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142626598	142626598	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV6	55503	broad.mit.edu	37	7	142572888	142572888	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81468068	81468068	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51870809	51870809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKS	60385	broad.mit.edu	37	19	50250163	50250163	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSC1	7260	broad.mit.edu	37	2	3341795	3341795	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC12	54970	broad.mit.edu	37	11	113195353	113195353	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39170265	39170265	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC26	79989	broad.mit.edu	37	7	138832135	138832135	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC31	64427	broad.mit.edu	37	2	74720290	74720290	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46847242	46847242	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179398288	179398288	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179411856	179411856	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179431857	179431857	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179451623	179451623	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179473146	179473146	+	Silent	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179480255	179480255	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179494983	179494983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179516903	179516903	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179554793	179554793	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179583950	179583950	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179595571	179595571	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179602947	179602947	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179611108	179611108	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179613326	179613326	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179664292	179664292	+	Missense_Mutation	SNP	C	A	A	rs151174349		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179664422	179664422	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTR	7276	broad.mit.edu	37	18	29178442	29178442	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19752452	19752452	+	Nonsense_Mutation	SNP	G	T	T	rs114178008		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19753412	19753412	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132238109	132238109	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA8	51807	broad.mit.edu	37	22	18566032	18566032	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUT1	64852	broad.mit.edu	37	11	62356562	62356562	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNB	167838	broad.mit.edu	37	6	139564124	139564124	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD2	10587	broad.mit.edu	37	22	19864759	19864759	+	Splice_Site	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41861093	41861093	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRP1	7306	broad.mit.edu	37	9	12704606	12704606	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	89018021	89018021	+	Missense_Mutation	SNP	G	T	T	rs61754393		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP1	51271	broad.mit.edu	37	9	34249796	34249796	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43838478	43838478	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2MP1	606551	broad.mit.edu	37	16	34404596	34404596	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2MP1	606551	broad.mit.edu	37	16	34404618	34404618	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2N	7334	broad.mit.edu	37	12	93804897	93804897	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118257070	118257070	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10239431	10239431	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBIAD1	29914	broad.mit.edu	37	1	11333506	11333506	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN1	29855	broad.mit.edu	37	16	4921032	4921032	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138944042	138944042	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19478261	19478261	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26644339	26644339	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2A	165324	broad.mit.edu	37	2	24205850	24205850	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59337528	59337528	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96665456	96665456	+	Intron	SNP	A	G	G	rs146577874	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234656593	234656593	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70465104	70465104	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70073982	70073982	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70156342	70156342	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70156572	70156572	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70160200	70160200	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346427	70346427	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346556	70346556	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70346634	70346634	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34826039	34826039	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17769095	17769095	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33479737	33479737	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33501253	33501253	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35541184	35541184	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35541233	35541233	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRC2	7385	broad.mit.edu	37	16	21974222	21974222	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URGCP	55665	broad.mit.edu	37	7	43921480	43921480	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215953232	215953232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216040371	216040371	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216363521	216363521	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216420110	216420110	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216420664	216420664	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USO1	8615	broad.mit.edu	37	4	76720768	76720768	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP10	9100	broad.mit.edu	37	16	84774032	84774032	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113725190	113725190	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61605508	61605508	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61632827	61632827	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP39	10713	broad.mit.edu	37	2	85868249	85868249	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP46	64854	broad.mit.edu	37	4	53494232	53494232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30213133	30213133	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	145069549	145069549	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UXS1	80146	broad.mit.edu	37	2	106739487	106739487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111421530	111421530	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	126132395	126132395	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	130189	130189	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	22453019	22453019	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	22498278	22498278	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	33346584	33346584	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37233018	37233018	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38990015	38990015	+	IGR	SNP	G	A	A	rs4070173		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39076305	39076305	+	IGR	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46187496	46187496	+	IGR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	47729804	47729804	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	5174894	5174894	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	67008450	67008450	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	79493401	79493401	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	79493917	79493917	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107047700	107047700	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	11157849	11157849	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18686903	18686903	+	IGR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4496685	4496685	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49052989	49052989	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49428079	49428079	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058303	5058303	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527265	51527265	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51579371	51579371	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55059780	55059780	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55069986	55069986	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070038	55070038	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55259408	55259408	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55782843	55782843	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56099241	56099241	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56143193	56143193	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58117057	58117057	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	62783595	62783595	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67693133	67693133	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71883574	71883574	+	IGR	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89467924	89467924	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89486853	89486853	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89487214	89487214	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89487216	89487216	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126994874	126994874	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33138893	33138893	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33139112	33139112	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	37938578	37938578	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38595881	38595881	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43965755	43965755	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	44054855	44054855	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64216849	64216849	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	66039971	66039971	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	75057551	75057551	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	76532405	76532405	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80722873	80722873	+	IGR	SNP	C	A	A	rs143101932	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	93429089	93429089	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19255508	19255508	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19467662	19467662	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	37513115	37513115	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	46261848	46261848	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59103274	59103274	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104711	59104711	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59104896	59104896	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59584708	59584708	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59584755	59584755	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61210999	61210999	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64039096	64039096	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65885152	65885152	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841681	67841681	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77561356	77561356	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	83397490	83397490	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86929551	86929551	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	101335540	101335540	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147368	20147368	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147389	20147389	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20168740	20168740	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20647500	20647500	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20692920	20692920	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20992763	20992763	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45332496	45332496	+	IGR	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52584645	52584645	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	54458286	54458286	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57508278	57508278	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	59648635	59648635	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	65747822	65747822	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	85417749	85417749	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	89576683	89576683	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95192696	95192696	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20450184	20450184	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21365523	21365523	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	45182026	45182026	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50087070	50087070	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31985240	31985240	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077719	32077719	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32169167	32169167	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32170412	32170412	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32403445	32403445	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32619483	32619483	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621683	32621683	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32915066	32915066	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33390484	33390484	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33408426	33408426	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33498012	33498012	+	IGR	SNP	C	A	A	rs146454434	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605159	33605159	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605572	33605572	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33629928	33629928	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34326416	34326416	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34327212	34327212	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	35142709	35142709	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48531558	48531558	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51680036	51680036	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52690103	52690103	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	58811200	58811200	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	61089522	61089522	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	63214470	63214470	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88620141	88620141	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20489148	20489148	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30439374	30439374	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	3169287	3169287	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	32659045	32659045	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	58642282	58642282	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60360211	60360211	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11625830	11625830	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14156694	14156694	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14392259	14392259	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14613398	14613398	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5002652	5002652	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	68893014	68893015	+	IGR	DNP	CC	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22469287	22469287	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22868816	22868816	+	IGR	SNP	G	C	C	rs144638359	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43883348	43883348	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	52613906	52613906	+	IGR	SNP	C	A	A	rs117998508	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53818517	53818517	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104469617	104469617	+	IGR	DEL	T	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434793	106434793	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	116400234	116400234	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	119157224	119157224	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120102255	120102255	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120151874	120151874	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	13182878	13182878	+	IGR	SNP	C	A	A	rs143988043	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146584431	146584431	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149050515	149050515	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149090814	149090814	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149091676	149091676	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149103877	149103877	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	151922886	151922886	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424763	158424763	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	160865926	160865926	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	162415459	162415459	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	164312617	164312617	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166245889	166245889	+	IGR	SNP	C	A	A	rs112884544		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246020	166246020	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246699	166246699	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	171639631	171639631	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115550	191115550	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	192685628	192685628	+	IGR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	194158387	194158387	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	208870720	208870720	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	220490262	220490262	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	236274195	236274195	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	240176185	240176185	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902365	247902365	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248637698	248637698	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175301	39175301	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	71126567	71126567	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80558780	80558780	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10367369	10367369	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29873714	29873714	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29930774	29930774	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53968239	53968239	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10862571	10862571	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14823932	14823932	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916554	14916554	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20230006	20230006	+	IGR	SNP	G	T	T	rs113787010		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20230577	20230578	+	IGR	DNP	TG	CT	CT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798216	21798216	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	30275694	30275694	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31933351	31933351	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16123404	16123404	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16365543	16365543	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	31552344	31552344	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	34986474	34986474	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	39466486	39466486	+	IGR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	101125927	101125927	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105387806	105387806	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107314240	107314240	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107315078	107315078	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	11492063	11492063	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131220812	131220812	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132182108	132182108	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133019838	133019838	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133020239	133020239	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	156126340	156126340	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	158818126	158818126	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	174736516	174736516	+	IGR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	20440469	20440469	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	56977637	56977637	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58688689	58688689	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423724	81423724	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	83446058	83446058	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	83822315	83822315	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464736	90464736	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872908	91872908	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893865	91893865	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893879	91893879	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91925006	91925007	+	IGR	INS	-	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91944017	91944017	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92028718	92028718	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116365446	116365446	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116745516	116745516	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116746306	116746306	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137599494	137599494	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	170670731	170670731	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	174095350	174095350	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	29129420	29129420	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35258185	35258185	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	39400446	39400446	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	39400976	39400976	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	42364018	42364018	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88367348	88367348	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88999733	88999733	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96386172	96386172	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97940958	97940958	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	111985122	111985122	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	112473223	112473223	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113378613	113378613	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13979223	13979223	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	159199317	159199317	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	16363260	16363260	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	182826962	182826962	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	183925111	183925111	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43588511	43588511	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43589893	43589893	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	57461495	57461495	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	62971599	62971599	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63684039	63684039	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64216809	64216809	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65297673	65297673	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70275004	70275004	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70283661	70283662	+	IGR	DNP	CC	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	82931924	82931924	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	97824062	97824062	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	119016734	119016734	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180395268	180395268	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	21196888	21196888	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23303967	23303967	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56615366	56615366	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	60039562	60039562	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	63256197	63256197	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	66986053	66986053	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	767021	767021	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	100499118	100499118	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	102901070	102901070	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112683370	112683371	+	IGR	INS	-	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	113543858	113543858	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	133318700	133318700	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	166477788	166477788	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23973089	23973089	+	IGR	SNP	G	T	T	rs16888373	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	24002157	24002157	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29236319	29236319	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48181912	48181912	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	71318591	71318591	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	71874831	71874831	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	79424412	79424412	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80774922	80774922	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	97096811	97096811	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	12512193	12512193	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136398675	136398675	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141587556	141587556	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144702543	144702543	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707776	144707776	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152446079	152446079	+	IGR	DEL	C	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152446718	152446718	+	IGR	SNP	C	G	G	rs146378384	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	15741147	15741147	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27368606	27368606	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	31370450	31370450	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	36858848	36858848	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	42836462	42836463	+	IGR	DNP	CC	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53071080	53071080	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53930666	53930666	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	54487381	54487382	+	IGR	DEL	CA	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	5600629	5600629	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296378	56296378	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56297156	56297156	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56358474	56358474	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56372504	56372504	+	IGR	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56718276	56718276	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62517969	62517969	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62916487	62916487	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020412	63020412	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63029389	63029389	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63032686	63032686	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63040740	63040740	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64800307	64800308	+	IGR	INS	-	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64973678	64973678	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106023489	106023489	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	106207263	106207263	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43126497	43126497	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61300398	61300398	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90255636	90255636	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	110860051	110860051	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	111389403	111389403	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	125450477	125450477	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21178965	21178965	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	2875735	2875735	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29824970	29824970	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30559480	30559480	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689817	30689817	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	34922906	34922906	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	35592798	35592798	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	40332958	40332958	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400066	43400066	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400790	43400790	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43998485	43998485	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44148303	44148303	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44174333	44174333	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66836850	66836850	+	IGR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477792	7477792	+	IGR	SNP	T	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7598387	7598387	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	80765484	80765484	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84672925	84672925	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84701082	84701082	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88401001	88401001	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88989811	88989811	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	89699356	89699356	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	98908865	98908866	+	IGR	INS	-	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110863715	110863715	+	IGR	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	112765919	112765919	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118207951	118207951	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	127261972	127261972	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134775226	134775226	+	IGR	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144711913	144711913	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144713244	144713244	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145701856	145701856	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	151648693	151648693	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	24326421	24326421	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26705802	26705802	+	IGR	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37401337	37401338	+	IGR	INS	-	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	38392605	38392605	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	44335411	44335411	+	IGR	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48306836	48306836	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52858363	52858363	+	IGR	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73094969	73094969	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	97677127	97677127	+	IGR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	10011770	10011770	+	IGR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13477470	13477470	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13622627	13622627	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	14596492	14596492	+	IGR	DEL	G	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	3550803	3550803	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	3734677	3734677	+	IGR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108315437	108315437	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82815315	82815315	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95660204	95660205	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219299256	219299256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53761993	53761993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79820890	79820890	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62325678	62325678	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12414217	12414217	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG10	54621	broad.mit.edu	37	12	118519906	118519906	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG4	11326	broad.mit.edu	37	X	65252501	65252501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3A	146177	broad.mit.edu	37	16	22152985	22152985	+	Silent	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6126086	6126086	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF3	10810	broad.mit.edu	37	13	27259873	27259873	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85645515	85645515	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9546502	9546502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR27	253769	broad.mit.edu	37	6	170033053	170033053	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118481001	118481001	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167254667	167254667	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR54	84058	broad.mit.edu	37	2	74652057	74652057	+	Missense_Mutation	SNP	G	T	T	rs144082439		TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36579885	36579885	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36595621	36595621	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85592309	85592309	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR78	79819	broad.mit.edu	37	1	67292659	67292659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96082607	96082607	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT3A	89780	broad.mit.edu	37	1	228238282	228238282	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT9A	7483	broad.mit.edu	37	1	228109636	228109636	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30977913	30977913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149245562	149245562	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39226647	39226648	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168099305	168099305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168108475	168108475	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73064219	73064219	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28110024	28110024	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPR1	9213	broad.mit.edu	37	1	180804231	180804231	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF3	25844	broad.mit.edu	37	6	43481021	43481021	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YLPM1	56252	broad.mit.edu	37	14	75269332	75269332	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC2	64848	broad.mit.edu	37	5	112929101	112929101	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100395326	100395326	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAP70	7535	broad.mit.edu	37	2	98349797	98349797	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167031678	167031678	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBP1	81030	broad.mit.edu	37	20	56189876	56189876	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBP1	81030	broad.mit.edu	37	20	56191346	56191346	+	Silent	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB44	29068	broad.mit.edu	37	11	130166397	130166397	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113069485	113069485	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H7A	29066	broad.mit.edu	37	16	11846493	11846493	+	Intron	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H7B	23264	broad.mit.edu	37	22	41745200	41745200	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64196404	64196404	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87500789	87500789	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC17	51538	broad.mit.edu	37	1	31821624	31821624	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31750000	31750000	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145156855	145156855	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145275040	145275040	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135524846	135524846	+	Splice_Site	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77690640	77690640	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77763548	77763548	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77767649	77767649	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP14	57677	broad.mit.edu	37	19	36831385	36831385	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP37	7539	broad.mit.edu	37	9	115806314	115806314	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP41	286128	broad.mit.edu	37	8	144332450	144332450	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP90	146198	broad.mit.edu	37	16	68597462	68597462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106813153	106813153	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR2	23217	broad.mit.edu	37	19	3834796	3834796	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE28	57732	broad.mit.edu	37	4	2306871	2306871	+	Missense_Mutation	SNP	C	T	T	rs73203327	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147114196	147114196	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN4	387032	broad.mit.edu	37	6	28217492	28217492	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45976695	45976695	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF207	7756	broad.mit.edu	37	17	30677106	30677106	+	5'Flank	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22154744	22154744	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22155075	22155075	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22155565	22155565	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44469497	44469497	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244217028	244217028	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF260	339324	broad.mit.edu	37	19	37005747	37005747	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF267	10308	broad.mit.edu	37	16	31906327	31906327	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133768558	133768558	+	Silent	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280A	129025	broad.mit.edu	37	22	22868570	22868570	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF283	284349	broad.mit.edu	37	19	44351434	44351434	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF323	64288	broad.mit.edu	37	6	28297162	28297162	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38353108	38353108	+	3'UTR	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178489012	178489012	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21606120	21606120	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49660022	49660022	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF454	285676	broad.mit.edu	37	5	178374069	178374069	+	Intron	DEL	A	-	-			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109686588	109686589	+	In_Frame_Ins	INS	-	AGCTCA	AGCTCA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109701435	109701435	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF467	168544	broad.mit.edu	37	7	149467542	149467542	+	Silent	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF492	57615	broad.mit.edu	37	19	22847748	22847748	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF502	91392	broad.mit.edu	37	3	44751545	44751545	+	5'Flank	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806254	22806254	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807073	22807073	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807426	22807426	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF525	170958	broad.mit.edu	37	19	53886837	53886837	+	3'UTR	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF527	84503	broad.mit.edu	37	19	37869883	37869883	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52942160	52942160	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31025939	31025940	+	Intron	DNP	CC	AT	AT			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF561	93134	broad.mit.edu	37	19	9724852	9724852	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF578	147660	broad.mit.edu	37	19	53015762	53015762	+	3'UTR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF586	54807	broad.mit.edu	37	19	58287995	58287995	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF587	84914	broad.mit.edu	37	19	58370797	58370797	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF611	81856	broad.mit.edu	37	19	53207690	53207690	+	3'UTR	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF615	284370	broad.mit.edu	37	19	52505609	52505609	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF643	65243	broad.mit.edu	37	1	40929215	40929215	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF648	127665	broad.mit.edu	37	1	182026091	182026091	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF658	26149	broad.mit.edu	37	9	40774548	40774548	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF662	389114	broad.mit.edu	37	3	42956151	42956151	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF667	63934	broad.mit.edu	37	19	56969679	56969679	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF707	286075	broad.mit.edu	37	8	144772325	144772325	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149172163	149172163	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF780B	163131	broad.mit.edu	37	19	40554637	40554637	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127013541	127013541	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88965846	88965846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88966076	88966076	+	Silent	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF814	730051	broad.mit.edu	37	19	58384403	58384403	+	Silent	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF845	91664	broad.mit.edu	37	19	53844638	53844638	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113608401	113608401	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYG11B	79699	broad.mit.edu	37	1	53237336	53237336	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	4008083	4008083	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	27568106	27568106	+	Intron	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30978232	30978232	+	5'Flank	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30982509	30982509	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30984967	30984967	+	5'UTR	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55063006	55063006	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89774530	89774530	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95411123	95411123	+	5'Flank	SNP	G	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22440647	22440647	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25427691	25427691	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25429526	25429526	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29001344	29001344	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077466	32077466	+	RNA	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88620361	88620361	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88620539	88620539	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90160912	90160912	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20447369	20447369	+	5'Flank	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25746826	25746826	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25751470	25751470	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	37190174	37190174	+	Intron	SNP	C	T	T	rs145408156	by1000genomes	TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	12320141	12320141	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23159339	23159339	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143189487	143189487	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159336518	159336518	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	205836012	205836012	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133074779	133074779	+	Intron	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075793	133075793	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186670134	186670134	+	Intron	SNP	T	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186670606	186670606	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	56216080	56216080	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89111240	89111240	+	Intron	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89197011	89197011	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89247231	89247231	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89475967	89475967	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90007704	90007704	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90122152	90122152	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90138963	90138963	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90139527	90139527	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90153675	90153675	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90249175	90249175	+	RNA	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96652499	96652499	+	RNA	SNP	C	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	95374413	95374413	+	RNA	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	24171057	24171057	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142000998	142000998	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142378707	142378707	+	Intron	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142470776	142470776	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142470801	142470801	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	148964399	148964399	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	148978577	148978577	+	Intron	SNP	A	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38295980	38295980	+	5'Flank	SNP	T	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370576	63370576	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370604	63370605	+	Intron	DNP	CT	AA	AA			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	96279744	96279744	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73163693	73163693	+	5'UTR	SNP	A	C	C			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86568008	86568008	+	5'Flank	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66514287	66514287	+	Intron	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66516725	66516725	+	Intron	SNP	G	T	T			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66517634	66517634	+	Intron	SNP	G	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69440291	69440291	+	Silent	SNP	A	G	G			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84677319	84677319	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	99961976	99961976	+	5'Flank	SNP	C	A	A			TCGA-05-4410-01A-21D-1855-08	TCGA-05-4410-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
