Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AADACL3	126767	broad.mit.edu	37	1	12780812	12780812	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48564093	48564093	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179543	87179543	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48210974	48210974	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89039396	89039396	+	Silent	SNP	G	T	T	rs140207606		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119027327	119027327	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI1	10006	broad.mit.edu	37	10	27048010	27048010	+	Silent	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116203832	116203832	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG2	72	broad.mit.edu	37	2	74140676	74140676	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACYP2	98	broad.mit.edu	37	2	54365795	54365795	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM18	8749	broad.mit.edu	37	8	39468320	39468320	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106757757	106757757	+	RNA	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926675	106926675	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107042367	107042367	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33546167	33546167	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73175255	73175255	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28306829	28306829	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFP	174	broad.mit.edu	37	4	74315043	74315043	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPHD1	123688	broad.mit.edu	37	15	78819669	78819669	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105412404	105412404	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105420209	105420209	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129270251	129270251	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129271011	129271011	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110925492	110925492	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551252	29551252	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38431292	38431292	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38500865	38500865	+	Intron	SNP	C	A	A	rs145887073	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC4	29945	broad.mit.edu	37	4	25391658	25391658	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41542220	41542220	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114161742	114161742	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114177071	114177071	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD2	26287	broad.mit.edu	37	10	99341096	99341096	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14851650	14851650	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34A	284615	broad.mit.edu	37	1	145474697	145474697	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117874739	117874740	+	Intron	INS	-	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69304562	69304562	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36655979	36655979	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2S1	1175	broad.mit.edu	37	19	47342740	47342740	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21229397	21229397	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21233785	21233785	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOO	79135	broad.mit.edu	37	X	23886820	23886820	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27425719	27425720	+	Intron	DNP	CC	AT	AT			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154296832	154296832	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35198869	35198869	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11312993	11312993	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17982963	17982963	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176913172	176913172	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	23985260	23985260	+	Intron	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG4A	115201	broad.mit.edu	37	X	107377577	107377577	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG9B	285973	broad.mit.edu	37	7	150720844	150720844	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42490070	42490070	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152807850	152807850	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84456035	84456036	+	Frame_Shift_Ins	INS	-	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50226743	50226743	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76856100	76856100	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI2	576	broad.mit.edu	37	1	32197661	32197661	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2	7916	broad.mit.edu	37	6	31603923	31603923	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33407245	33407245	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136597201	136597201	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129147341	129147341	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCOR	54880	broad.mit.edu	37	X	39931720	39931720	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32447000	32447000	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803312	55803312	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF2	55290	broad.mit.edu	37	8	37704488	37704488	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111398671	111398671	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB3	9184	broad.mit.edu	37	10	124922239	124922239	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5782212	5782212	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf2	738	broad.mit.edu	37	11	64875037	64875037	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97114182	97114182	+	Splice_Site	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf106	55320	broad.mit.edu	37	14	45686404	45686404	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95918724	95918724	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24921956	24921956	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf107	27042	broad.mit.edu	37	1	210015678	210015678	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf94	84970	broad.mit.edu	37	1	34663388	34663388	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31690778	31690778	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf79	140856	broad.mit.edu	37	20	18794626	18794626	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf81	391267	broad.mit.edu	37	21	15317449	15317449	+	Intron	SNP	T	G	G	rs34600288		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf81	391267	broad.mit.edu	37	21	15317472	15317472	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf30	253143	broad.mit.edu	37	22	32108284	32108284	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf80	389073	broad.mit.edu	37	2	209049628	209049628	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3P1	388503	broad.mit.edu	37	19	10157824	10157824	+	RNA	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf48	389320	broad.mit.edu	37	5	125971690	125971690	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf22	492307	broad.mit.edu	37	8	49987813	49987814	+	3'UTR	INS	-	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf102	375748	broad.mit.edu	37	9	98678023	98678023	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf5	23731	broad.mit.edu	37	9	111870721	111870721	+	Intron	DEL	G	-	-	rs55890841		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP5	56344	broad.mit.edu	37	19	48533866	48533866	+	Intron	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181706657	181706657	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALML3	810	broad.mit.edu	37	10	5567336	5567336	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2B	816	broad.mit.edu	37	7	44281964	44281964	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPRIN2	65981	broad.mit.edu	37	12	30879010	30879010	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2951989	2951989	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20279735	20279735	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC148	130940	broad.mit.edu	37	2	159166148	159166148	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28A	25901	broad.mit.edu	37	6	139097279	139097279	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	63822325	63822325	+	Intron	DEL	G	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL3	6348	broad.mit.edu	37	17	34416497	34416497	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR6	1235	broad.mit.edu	37	6	167417725	167417725	+	5'UTR	SNP	G	T	T	rs41269603	byFrequency;by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6B	10693	broad.mit.edu	37	17	33288403	33288403	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7633697	7633697	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158299700	158299700	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD28	940	broad.mit.edu	37	2	204591409	204591409	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD53	963	broad.mit.edu	37	1	111435178	111435178	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD97	976	broad.mit.edu	37	19	14512216	14512216	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65005896	65005896	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21755993	21755993	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26905971	26905971	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26906121	26906121	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDRT4	284040	broad.mit.edu	37	17	15343482	15343482	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPA	1058	broad.mit.edu	37	2	27016277	27016277	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170	9859	broad.mit.edu	37	1	243354347	243354347	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93496623	93496623	+	Silent	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45671882	45671882	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHSY1	22856	broad.mit.edu	37	15	101717776	101717776	+	Silent	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN5	1184	broad.mit.edu	37	X	49845313	49845313	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10149523	10149523	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC6A	93978	broad.mit.edu	37	12	8610547	8610547	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC9A	283420	broad.mit.edu	37	12	10206811	10206811	+	Intron	DEL	C	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2P	1197	broad.mit.edu	37	7	23625238	23625238	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLRN1	7401	broad.mit.edu	37	3	150690263	150690263	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150908236	150908236	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6261622	6261622	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2942376	2942376	+	Silent	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147092834	147092834	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101797630	101797630	+	Splice_Site	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70851855	70851855	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107421879	107421879	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189904125	189904125	+	Silent	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189929404	189929404	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1C	23603	broad.mit.edu	37	12	109046014	109046014	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131388394	131388394	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125602101	125602101	+	Intron	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8613721	8613721	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197333010	197333010	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43906655	43906655	+	Silent	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPT	9419	broad.mit.edu	37	2	46851260	46851260	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87005257	87005257	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2855612	2855612	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34083158	34083158	+	Nonsense_Mutation	SNP	C	A	A	rs147615570		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68026234	68026234	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDP1	9150	broad.mit.edu	37	18	77470451	77470451	+	Intron	SNP	G	T	T	rs62097743	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11411628	11411628	+	Intron	SNP	A	T	T	rs112826687		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSG	1511	broad.mit.edu	37	14	25043050	25043050	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49005505	49005505	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49034416	49034416	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC1	1538	broad.mit.edu	37	X	83128563	83128563	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99445237	99445237	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48981446	48981446	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTIP	9595	broad.mit.edu	37	2	158272583	158272583	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85415594	85415594	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298618	125298618	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298934	125298934	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAKD	79877	broad.mit.edu	37	17	43131430	43131430	+	Intron	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31349616	31349616	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC2	51473	broad.mit.edu	37	6	24178870	24178870	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74593020	74593020	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60L	91351	broad.mit.edu	37	4	169300609	169300609	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19369931	19369931	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT2L6	347516	broad.mit.edu	37	X	69397412	69397412	+	5'UTR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84245668	84245668	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071470	35071470	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31747957	31747957	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32382758	32382758	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52394178	52394178	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB3	414061	broad.mit.edu	37	2	234652078	234652078	+	3'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB3	414061	broad.mit.edu	37	2	234652384	234652384	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC12	56521	broad.mit.edu	37	10	69565369	69565369	+	Silent	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTT	1791	broad.mit.edu	37	10	98092368	98092368	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116525883	116525883	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28737519	28737519	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117302317	117302317	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56418454	56418454	+	Splice_Site	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP21	63904	broad.mit.edu	37	X	44703492	44703492	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57678865	57678865	+	5'Flank	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95616384	95616384	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71795382	71795382	+	Silent	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYTN	391475	broad.mit.edu	37	2	207564941	207564941	+	Splice_Site	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77449706	77449706	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25716008	25716008	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM2	1842	broad.mit.edu	37	9	95272247	95272247	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82554002	82554002	+	Intron	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42949677	42949677	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8008847	8008847	+	5'Flank	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3K	27335	broad.mit.edu	37	19	39116585	39116585	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184039951	184039951	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN3	90187	broad.mit.edu	37	20	39992319	39992319	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42515415	42515415	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131247615	131247615	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5428374	5428374	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	94120814	94120814	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56270502	56270502	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT2	57488	broad.mit.edu	37	7	158580836	158580836	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC2	132884	broad.mit.edu	37	4	5693029	5693029	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXO1	9156	broad.mit.edu	37	1	242042514	242042514	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXTL3	2137	broad.mit.edu	37	8	28573840	28573840	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45630119	45630119	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133849757	133849757	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11	2160	broad.mit.edu	37	4	187195502	187195502	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAAH	2166	broad.mit.edu	37	1	46871629	46871629	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM118B	79607	broad.mit.edu	37	11	126110730	126110730	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160B1	57700	broad.mit.edu	37	10	116608452	116608452	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169A	26049	broad.mit.edu	37	5	74100403	74100403	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM175B	23172	broad.mit.edu	37	10	126523082	126523082	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34149300	34149300	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37028015	37028015	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90536768	90536768	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM78B	149297	broad.mit.edu	37	1	166039567	166039567	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8161029	8161029	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102518756	102518756	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137803106	137803106	+	Missense_Mutation	SNP	G	T	T	rs142943184	byFrequency;by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157556006	157556006	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERD3L	222894	broad.mit.edu	37	7	19184745	19184745	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155487719	155487719	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102670654	102670654	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF3	2248	broad.mit.edu	37	11	69631242	69631242	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152323008	152323008	+	3'UTR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152278647	152278647	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279646	152279646	+	Silent	SNP	G	A	A	rs113241501	byFrequency;by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153594893	153594893	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128493588	128493588	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171227132	171227132	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47754084	47754084	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC7	163479	broad.mit.edu	37	1	109270708	109270708	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR4	390243	broad.mit.edu	37	11	94039629	94039629	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14797460	14797460	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37732490	37732490	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12738518	12738518	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48551739	48551739	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1	79187	broad.mit.edu	37	19	4306112	4306112	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39134975	39134975	+	Silent	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD10	11211	broad.mit.edu	37	12	130648340	130648340	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G2E3	55632	broad.mit.edu	37	14	31066563	31066563	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151393209	151393209	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151819145	151819145	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26569896	26569896	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130027144	130027144	+	5'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153800615	153800615	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF2	2658	broad.mit.edu	37	10	48414372	48414372	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH2	2689	broad.mit.edu	37	17	61958049	61958049	+	Intron	SNP	A	C	C	rs141158489		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP2	26157	broad.mit.edu	37	7	150390208	150390208	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150164216	150164216	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA10	84694	broad.mit.edu	37	6	90604267	90604267	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLA	2717	broad.mit.edu	37	X	100662735	100662735	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L3	112937	broad.mit.edu	37	11	134181165	134181165	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121743871	121743871	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175603949	175603949	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132795752	132795752	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132438835	132438835	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHN	10243	broad.mit.edu	37	14	67432223	67432223	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135482265	135482265	+	Silent	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR174	84636	broad.mit.edu	37	X	78426662	78426662	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR1	2825	broad.mit.edu	37	2	207041255	207041255	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP1	9737	broad.mit.edu	37	X	101911404	101911404	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94376951	94376951	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37282894	37282894	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9943738	9943738	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2	2946	broad.mit.edu	37	1	110210925	110210925	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM5	2949	broad.mit.edu	37	1	110256125	110256125	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27492447	27492447	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106849535	106849535	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7894772	7894772	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS5	23354	broad.mit.edu	37	19	36110835	36110835	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5593128	5593129	+	Intron	INS	-	CA	CA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153218966	153218967	+	Intron	DNP	CT	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	239976512	239976512	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41058131	41058131	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43283497	43283497	+	5'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43531769	43531769	+	Silent	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124716733	124716733	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92826772	92826773	+	Intron	INS	-	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65411882	65411882	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGD	3081	broad.mit.edu	37	3	120347143	120347143	+	3'UTR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81355131	81355131	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27141063	27141063	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP1BP3	50809	broad.mit.edu	37	1	21099838	21099838	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100995383	100995383	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114141513	114141513	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114141543	114141543	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3E	285242	broad.mit.edu	37	3	183822012	183822012	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148568624	148568624	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160469622	160469622	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF11	152404	broad.mit.edu	37	3	118623644	118623644	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130408104	130408104	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RA	23765	broad.mit.edu	37	22	17577832	17577832	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102625947	102625947	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29938086	29938086	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6061546	6061546	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35871067	35871067	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62288603	62288603	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5B	3633	broad.mit.edu	37	1	38356974	38356974	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77690191	77690191	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75964638	75964638	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31425592	31425592	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31435089	31435089	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30529243	30529243	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31384712	31384712	+	Splice_Site	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB2	3689	broad.mit.edu	37	21	46309915	46309915	+	Missense_Mutation	SNP	G	T	T	rs61747606	byFrequency	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP3	282973	broad.mit.edu	37	10	133966534	133966534	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124281951	124281951	+	Intron	SNP	C	A	A	rs143429804		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD6	89890	broad.mit.edu	37	13	41705565	41705565	+	Silent	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63416780	63416780	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH6	81033	broad.mit.edu	37	17	61622973	61622973	+	Missense_Mutation	SNP	C	A	A	rs143517235		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	169781000	169781000	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68128403	68128403	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ8	3764	broad.mit.edu	37	12	21918603	21918603	+	3'UTR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36768544	36768544	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5C	8242	broad.mit.edu	37	X	53241142	53241142	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55953774	55953774	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142651373	142651373	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS3	10656	broad.mit.edu	37	8	136555068	136555068	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19569061	19569061	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0494	9813	broad.mit.edu	37	1	47157460	47157460	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8793132	8793132	+	Intron	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118284538	118284538	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44249162	44249162	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94120395	94120395	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118687292	118687292	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1712	80817	broad.mit.edu	37	4	175220265	175220265	+	5'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16355030	16355030	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47289507	47289507	+	Splice_Site	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55278620	55278620	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL13	90293	broad.mit.edu	37	X	117079444	117079444	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53519984	53519984	+	Silent	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45752095	45752095	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	A	A	rs121913529		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-10	353333	broad.mit.edu	37	21	46057462	46057462	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-3	337970	broad.mit.edu	37	21	31864089	31864089	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP26-1	388818	broad.mit.edu	37	21	31692128	31692128	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP3-3	85293	broad.mit.edu	37	17	39150305	39150306	+	Frame_Shift_Ins	INS	-	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1CAM	3897	broad.mit.edu	37	X	153141232	153141232	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60904253	60904253	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM5	7805	broad.mit.edu	37	1	31210439	31210439	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203743207	203743207	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1F	353137	broad.mit.edu	37	1	152748887	152748887	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE5A	254910	broad.mit.edu	37	1	152484167	152484167	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHA	3939	broad.mit.edu	37	11	18424404	18424404	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEP	3952	broad.mit.edu	37	7	127892140	127892140	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25958138	25958138	+	5'Flank	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55179300	55179300	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15537620	15537620	+	Nonsense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97822649	97822649	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284232	284232	broad.mit.edu	37	13	19412191	19412191	+	RNA	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178896957	178896957	+	Splice_Site	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49805625	49805625	+	Splice_Site	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440173	440173	broad.mit.edu	37	9	89627105	89627105	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC650368	650368	broad.mit.edu	37	11	3424970	3424970	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF2	164832	broad.mit.edu	37	2	100906997	100906997	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR4	2846	broad.mit.edu	37	X	78010954	78010954	+	Silent	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141135856	141135856	+	Splice_Site	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504491	70504491	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85450741	85450741	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP2	338645	broad.mit.edu	37	11	24784871	24784871	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166987220	166987220	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA1	4100	broad.mit.edu	37	X	152482377	152482378	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA8	4107	broad.mit.edu	37	X	149013858	149013858	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140993218	140993218	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161508882	161508882	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP1	9479	broad.mit.edu	37	11	45926567	45926567	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217124066	217124066	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10410252	10410252	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119749988	119749988	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	99015917	99015917	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS1	8720	broad.mit.edu	37	16	84125475	84125475	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126754829	126754829	+	Silent	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126792950	126792950	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP3L	9848	broad.mit.edu	37	4	170912688	170912688	+	Silent	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141758016	141758016	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74899330	74899330	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43207957	43207957	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA2	117153	broad.mit.edu	37	14	39706101	39706101	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1	4281	broad.mit.edu	37	X	10437633	10437633	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIIP	60672	broad.mit.edu	37	1	12089847	12089847	+	Silent	SNP	G	T	T	rs138345116		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKRN3	7681	broad.mit.edu	37	15	23811793	23811793	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151891053	151891053	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154889844	154889844	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC3	23515	broad.mit.edu	37	21	37741309	37741309	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP1	4354	broad.mit.edu	37	X	154009497	154009497	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL1	9019	broad.mit.edu	37	1	167745338	167745338	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL1	65008	broad.mit.edu	37	4	78830509	78830509	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL35	51318	broad.mit.edu	37	2	86433312	86433312	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS27	23107	broad.mit.edu	37	5	71530117	71530117	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A1	931	broad.mit.edu	37	11	60233379	60233379	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A6E	245802	broad.mit.edu	37	11	60105493	60105493	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76345887	76345887	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151358403	151358403	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9058299	9058299	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9073838	9073838	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100677757	100677757	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3240239	3240239	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL1	4603	broad.mit.edu	37	8	67492485	67492485	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42331360	42331361	+	Missense_Mutation	DNP	CA	TT	TT			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15892589	15892589	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108102463	108102463	+	Frame_Shift_Del	DEL	T	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33584585	33584585	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10322188	10322188	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2678401	2678401	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109847330	109847330	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26357725	26357725	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40103677	40103677	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40133635	40133635	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L4	4676	broad.mit.edu	37	11	2979700	2979700	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	20099583	20099583	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22696660	22696660	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133542273	133542273	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75562937	75562937	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS6	4726	broad.mit.edu	37	5	1814644	1814644	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84024276	84024276	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20982101	20982101	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIB	4781	broad.mit.edu	37	9	14125574	14125574	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103910990	103910990	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52508829	52508829	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36955648	36955648	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37049220	37049220	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP12	91662	broad.mit.edu	37	19	54299180	54299180	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56485017	56485017	+	Splice_Site	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC3L	64318	broad.mit.edu	37	10	96099536	96099536	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH3	4854	broad.mit.edu	37	19	15295951	15295951	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179544699	179544699	+	Intron	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32786366	32786366	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154112395	154112395	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP62CL	54830	broad.mit.edu	37	X	106374914	106374914	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102338133	102338133	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101804671	101804671	+	5'Flank	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101093396	101093396	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101096045	101096045	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101096677	101096677	+	Missense_Mutation	SNP	C	T	T	rs145492861		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFR	11054	broad.mit.edu	37	20	61445049	61445049	+	3'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGN	4969	broad.mit.edu	37	9	95163438	95163438	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML1	283298	broad.mit.edu	37	11	7530738	7530738	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132306643	132306643	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1MW	2652	broad.mit.edu	37	X	153496193	153496193	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921475	247921475	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263130	248263130	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112412	248112412	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551546	248551546	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2Y1	134083	broad.mit.edu	37	5	180166174	180166174	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612538	20612538	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20215964	20215964	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4842727	4842727	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020793	5020793	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D18	219438	broad.mit.edu	37	11	55587432	55587432	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188903	98188903	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579402	55579402	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579854	55579854	+	Silent	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C4	341418	broad.mit.edu	37	12	55945335	55945335	+	Nonsense_Mutation	SNP	G	T	T	rs78982301	byFrequency;by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7G2	390882	broad.mit.edu	37	19	9213200	9213200	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890175	55890175	+	Silent	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC4L	5000	broad.mit.edu	37	2	148730985	148730985	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPN1	8106	broad.mit.edu	37	14	23792710	23792710	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9524980	9524980	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112898635	112898635	+	Missense_Mutation	SNP	G	T	T	rs146199973	byFrequency	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176585643	176585643	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25444554	25444555	+	Intron	DNP	TC	CA	CA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162990380	162990380	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP9	83666	broad.mit.edu	37	3	122274537	122274537	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASD1	139135	broad.mit.edu	37	X	150828402	150828402	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127255550	127255550	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127255560	127255560	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX5	5079	broad.mit.edu	37	9	36923304	36923305	+	Intron	DEL	TC	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55996679	55996679	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA11	56138	broad.mit.edu	37	5	140249814	140249814	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140175994	140175994	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181956	140181956	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA9	9752	broad.mit.edu	37	5	140229827	140229828	+	Missense_Mutation	DNP	CG	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF1	84759	broad.mit.edu	37	2	74733844	74733844	+	Intron	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82583786	82583786	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105198508	105198508	+	Frame_Shift_Del	DEL	A	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165792703	165792703	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72297215	72297215	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144875861	144875861	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119043973	119043973	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156883518	156883518	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18944494	18944494	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18972504	18972504	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGN	23556	broad.mit.edu	37	18	59777144	59777144	+	Silent	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17111600	17111600	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R2	5296	broad.mit.edu	37	19	18276920	18276920	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130435222	130435222	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL3	440822	broad.mit.edu	37	22	25123956	25123956	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102051013	102051013	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51890920	51890920	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHO1	51177	broad.mit.edu	37	1	150129601	150129601	+	Missense_Mutation	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR5	389158	broad.mit.edu	37	3	146307686	146307686	+	Intron	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153700006	153700006	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94641809	94641809	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118355742	118355742	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84586074	84586074	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24906286	24906286	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLRMT	5442	broad.mit.edu	37	19	625204	625204	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16287660	16287660	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39247049	39247049	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAP2B	8613	broad.mit.edu	37	1	56989949	56989949	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF2	5470	broad.mit.edu	37	4	76797517	76797517	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27845694	27845694	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIAL4G	644591	broad.mit.edu	37	1	143767862	143767863	+	Translation_Start_Site	DNP	GG	TT	TT			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL2	23759	broad.mit.edu	37	22	22035675	22035675	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160474182	160474182	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1B	5519	broad.mit.edu	37	11	111636081	111636081	+	Missense_Mutation	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF12	390999	broad.mit.edu	37	1	12837707	12837707	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF13	400736	broad.mit.edu	37	1	13448266	13448266	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509927	23509927	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23522766	23522766	+	Silent	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG3	53632	broad.mit.edu	37	2	219695055	219695055	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128178938	128178938	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1579293	1579293	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5L	79899	broad.mit.edu	37	11	36484285	36484285	+	Nonstop_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227075895	227075895	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43708212	43708212	+	Missense_Mutation	SNP	C	A	A	rs147299450	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43414968	43414968	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54159167	54159167	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD1	139411	broad.mit.edu	37	X	23412216	23412216	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTF1A	256297	broad.mit.edu	37	10	23481584	23481584	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8484412	8484412	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40748573	40748573	+	Splice_Site	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYHIN1	149628	broad.mit.edu	37	1	158943507	158943507	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136403121	136403121	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP1	10635	broad.mit.edu	37	12	4662313	4662313	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP2	729475	broad.mit.edu	37	2	17699715	17699715	+	5'Flank	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34823639	34823639	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAMP2	10266	broad.mit.edu	37	17	40914762	40914762	+	Frame_Shift_Del	DEL	C	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAMP3	10268	broad.mit.edu	37	7	45222663	45222663	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAMP3	10268	broad.mit.edu	37	7	45222926	45222926	+	Missense_Mutation	SNP	C	T	T	rs146295145		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170640697	170640697	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170679247	170679247	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109371430	109371430	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP4	5928	broad.mit.edu	37	1	33134048	33134048	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM10	8241	broad.mit.edu	37	X	47034362	47034362	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155152133	155152133	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48389044	48389044	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103214661	103214661	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103301849	103301849	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17065626	17065626	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERGL	79785	broad.mit.edu	37	12	18237551	18237551	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC3	5983	broad.mit.edu	37	13	34409540	34409540	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	106977024	106977024	+	5'Flank	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGAG1	57529	broad.mit.edu	37	X	109695829	109695829	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108488728	108488728	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240978227	240978227	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB1	9886	broad.mit.edu	37	10	62632019	62632019	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHO	6010	broad.mit.edu	37	3	129251250	129251250	+	Silent	SNP	C	A	A	rs143003934		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39002484	39002485	+	Intron	INS	-	TG	TG			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152315445	152315445	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF219	79596	broad.mit.edu	37	13	79190730	79190730	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486066	94486066	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38132700	38132700	+	Nonsense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38169932	38169932	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA6	27330	broad.mit.edu	37	X	83372409	83372409	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78681815	78681815	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN2	6253	broad.mit.edu	37	19	45997242	45997242	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165377566	165377566	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237666676	237666676	+	Frame_Shift_Del	DEL	A	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237817548	237817548	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237880483	237880483	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947042	237947042	+	Silent	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33926871	33926871	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAG	6295	broad.mit.edu	37	2	234227423	234227423	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92731291	92731291	+	Nonsense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84363147	84363147	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243579109	243579109	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3377960	3377960	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	134002584	134002584	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31B	25956	broad.mit.edu	37	10	102249904	102249904	+	Silent	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151345021	151345021	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9202063	9202063	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT6	23157	broad.mit.edu	37	X	118767556	118767556	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61264592	61264592	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB2	5055	broad.mit.edu	37	18	61562436	61562436	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61306540	61306540	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3A3	10946	broad.mit.edu	37	1	38435025	38435025	+	Splice_Site	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS11	9295	broad.mit.edu	37	1	70687370	70687371	+	Frame_Shift_Ins	INS	-	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPA2	729238	broad.mit.edu	37	10	81318868	81318868	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN2	118980	broad.mit.edu	37	10	104495588	104495588	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPL1	8879	broad.mit.edu	37	10	72614534	72614534	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B2	10603	broad.mit.edu	37	7	101952177	101952177	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49135746	49135746	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51628841	51628841	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232577115	232577115	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164709251	164709251	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164733968	164733968	+	Intron	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44672622	44672622	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	62931252	62931252	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63066369	63066369	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A25	387601	broad.mit.edu	37	11	62948379	62948379	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95822310	95822310	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A10	55532	broad.mit.edu	37	1	220100447	220100448	+	Splice_Site	DNP	CC	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A10	57181	broad.mit.edu	37	2	196599806	196599806	+	3'UTR	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC40A1	30061	broad.mit.edu	37	2	190430008	190430008	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A3	54946	broad.mit.edu	37	3	125731287	125731287	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42334955	42334955	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32445885	32445885	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21359077	21359077	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168201217	168201217	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144904119	144904119	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142717341	142717341	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130930282	130930282	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25334042	25334042	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1251123	1251123	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX25	83891	broad.mit.edu	37	4	186209166	186209166	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX25	83891	broad.mit.edu	37	4	186284532	186284532	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179312163	179312163	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802789	106802789	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24048665	24048665	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX7	83595	broad.mit.edu	37	8	10583456	10583456	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35670143	35670143	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220333380	220333380	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228882479	228882479	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55659052	55659052	+	Missense_Mutation	SNP	C	A	A	rs148245438	byFrequency	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54839363	54839363	+	Silent	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18	6760	broad.mit.edu	37	18	23612330	23612330	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218134	48218134	+	5'Flank	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD8	9754	broad.mit.edu	37	X	67943764	67943765	+	Intron	DNP	CC	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32C	282974	broad.mit.edu	37	10	134059441	134059441	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37076763	37076763	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX16	8675	broad.mit.edu	37	20	57245566	57245566	+	Splice_Site	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP4	252983	broad.mit.edu	37	17	53155418	53155418	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	121126216	121126216	+	Frame_Shift_Del	DEL	G	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70599988	70599988	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149885086	149885086	+	Silent	SNP	G	T	T	rs144624887		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115455572	115455572	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152725441	152725441	+	Silent	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37965979	37965979	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70677997	70677997	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234565957	234565957	+	Nonsense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33445440	33445440	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R39	259285	broad.mit.edu	37	7	142880399	142880399	+	5'Flank	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D10A	83874	broad.mit.edu	37	22	30688804	30688804	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D2	55357	broad.mit.edu	37	9	100997605	100997605	+	Intron	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75936627	75936627	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8B	54885	broad.mit.edu	37	X	106117037	106117037	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCK	93627	broad.mit.edu	37	4	107133844	107133844	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119469162	119469162	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX19	9095	broad.mit.edu	37	1	168262493	168262493	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114841542	114841542	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF25	22980	broad.mit.edu	37	16	89967042	89967042	+	Splice_Site	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCN1	6947	broad.mit.edu	37	11	59633784	59633784	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124181821	124181821	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD1	56165	broad.mit.edu	37	10	115973036	115973036	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104474740	104474740	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224961	107224961	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM2	7052	broad.mit.edu	37	20	36784514	36784514	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGIT	201633	broad.mit.edu	37	3	114014388	114014388	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56827313	56827313	+	Intron	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30024963	30024963	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153551614	153551614	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120475650	120475650	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75435733	75435733	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED10P1	286102	broad.mit.edu	37	8	146220548	146220548	+	Missense_Mutation	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM144	55314	broad.mit.edu	37	4	159162701	159162701	+	Missense_Mutation	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15430503	15430503	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM53	79639	broad.mit.edu	37	1	45101855	45101855	+	3'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS	8658	broad.mit.edu	37	8	9623218	9623218	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32543811	32543811	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971750	10971750	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45522849	45522849	+	Silent	SNP	C	T	T	rs146580471		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM40	135644	broad.mit.edu	37	6	30114996	30114996	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55037993	55037993	+	3'UTR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM58	25893	broad.mit.edu	37	1	248039832	248039832	+	3'UTR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100291990	100291990	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31294304	31294304	+	Silent	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116617157	116617157	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16326965	16326965	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV6	55503	broad.mit.edu	37	7	142574936	142574936	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141955355	141955355	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2122317	2122317	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC16	158248	broad.mit.edu	37	9	130479638	130479638	+	Nonsense_Mutation	SNP	G	T	T	rs139753825	byFrequency	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC5	91875	broad.mit.edu	37	14	20767060	20767060	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	99890830	99890830	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2D3	7323	broad.mit.edu	37	4	103723775	103723775	+	Silent	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234676637	234676637	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35396703	35396703	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35403960	35403960	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17522927	17522927	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215820889	215820889	+	Nonsense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP26	83844	broad.mit.edu	37	X	132159958	132159958	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP31	57478	broad.mit.edu	37	16	23101909	23101909	+	Intron	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61484357	61484357	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61566728	61566728	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37812788	37812788	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46216459	46216459	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	48025337	48025337	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57428061	57428061	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127811503	127811503	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50227601	50227601	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5114001	5114001	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527805	51527805	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71870391	71870391	+	IGR	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94647097	94647097	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127873475	127873475	+	IGR	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80704373	80704373	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111591508	111591508	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	75403176	75403176	+	IGR	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19585415	19585415	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20265019	20265019	+	IGR	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20647404	20647404	+	IGR	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45331918	45331918	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	71355903	71355904	+	IGR	DNP	CG	TT	TT			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32447441	32447441	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926825	32926825	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33020847	33020847	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424823	33424823	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33647419	33647419	+	IGR	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14205128	14205128	+	IGR	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14225676	14225676	+	IGR	SNP	G	T	T	rs148058337	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22654607	22654607	+	IGR	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35875030	35875030	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43719441	43719441	+	IGR	SNP	G	C	C	rs143065654	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	49526075	49526075	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149094449	149094449	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	224762640	224762640	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	59465954	59465954	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16123759	16123759	+	IGR	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132349666	132349666	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	13555112	13555112	+	IGR	SNP	A	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	161905390	161905390	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162360182	162360183	+	IGR	DNP	CC	AT	AT	rs112992540		TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	8743436	8743436	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	104221804	104221805	+	IGR	DNP	CC	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	141539529	141539529	+	IGR	SNP	G	T	T	rs116730184	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	160415011	160415011	+	IGR	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580829	18580829	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856284	82856284	+	IGR	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	127121540	127121540	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	143131889	143131889	+	IGR	SNP	G	T	T	rs139501422	by1000genomes	TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603766	153603766	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23972334	23972334	+	IGR	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66547455	66547455	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	21260059	21260059	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	46039252	46039252	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48942868	48942868	+	IGR	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48943247	48943247	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63476118	63476118	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6968235	6968235	+	IGR	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	74190030	74190030	+	IGR	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	94743436	94743436	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120337113	120337113	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120338083	120338083	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135029160	135029161	+	IGR	DNP	TG	GT	GT			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	145074335	145074335	+	IGR	SNP	G	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26178995	26178995	+	IGR	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	43890183	43890183	+	IGR	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57704078	57704078	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72443272	72443272	+	IGR	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	73617301	73617301	+	IGR	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828667	79828667	+	IGR	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155119028	155119028	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6078534	6078535	+	Frame_Shift_Ins	INS	-	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6145721	6145722	+	Intron	DNP	CC	AA	AA			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR43	23160	broad.mit.edu	37	2	29136535	29136535	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF2	147179	broad.mit.edu	37	17	38416822	38416822	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31596902	31596902	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIAP	331	broad.mit.edu	37	X	123019764	123019764	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168102024	168102024	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR7	343702	broad.mit.edu	37	20	30584922	30584922	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128889338	128889338	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128890485	128890485	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	166960202	166960202	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77912683	77912683	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128975899	128975899	+	Missense_Mutation	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND2A	90637	broad.mit.edu	37	7	1197229	1197229	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77764798	77764798	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE28	57732	broad.mit.edu	37	4	2321937	2321937	+	Missense_Mutation	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX1	11244	broad.mit.edu	37	8	124266616	124266616	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70471019	70471019	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	293308	293308	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58579459	58579459	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF23	7571	broad.mit.edu	37	16	71482488	71482488	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF366	167465	broad.mit.edu	37	5	71756814	71756814	+	Silent	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37B	100129482	broad.mit.edu	37	10	43016213	43016213	+	RNA	SNP	T	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188064	57188064	+	Missense_Mutation	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518A	9849	broad.mit.edu	37	10	97919653	97919653	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF546	339327	broad.mit.edu	37	19	40514427	40514427	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF559	84527	broad.mit.edu	37	19	9449258	9449258	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9583990	9583990	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF611	81856	broad.mit.edu	37	19	53207840	53207840	+	3'UTR	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF673	55634	broad.mit.edu	37	X	46315355	46315355	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF765	91661	broad.mit.edu	37	19	53911926	53911926	+	Missense_Mutation	SNP	A	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185803228	185803228	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF99	7652	broad.mit.edu	37	19	22940448	22940448	+	Missense_Mutation	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB3	84083	broad.mit.edu	37	2	136268725	136268725	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187712504	187712504	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM5	57643	broad.mit.edu	37	1	45508774	45508774	+	Intron	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31086700	31086700	+	Missense_Mutation	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22315231	22315231	+	Intron	SNP	C	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22337247	22337247	+	Intron	DEL	C	-	-			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28734072	28734072	+	Nonsense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	28963342	28963342	+	Intron	SNP	G	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	40147928	40147928	+	Intron	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142720754	142720754	+	Intron	SNP	A	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143210048	143210048	+	Intron	SNP	T	C	C			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16255888	16255888	+	5'Flank	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89399371	89399371	+	RNA	SNP	T	G	G			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89459447	89459447	+	RNA	SNP	C	A	A			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90193482	90193482	+	Intron	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84676025	84676025	+	Missense_Mutation	SNP	G	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90744734	90744734	+	Missense_Mutation	SNP	C	T	T			TCGA-38-4626-01A-01D-1553-08	TCGA-38-4626-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
