Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AACS	65985	broad.mit.edu	37	12	125561082	125561082	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125561082	125561082	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31438889	31438889	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31438889	31438889	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACMSD	130013	broad.mit.edu	37	2	135621051	135621051	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACMSD	130013	broad.mit.edu	37	2	135621051	135621051	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131322423	131322423	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131322423	131322423	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20481060	20481060	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20481060	20481060	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178581848	178581848	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178581848	178581848	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64519034	64519034	+	Intron	SNP	T	C	C	rs1015860	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18574179	18574179	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18574179	18574179	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154561024	154561024	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154561024	154561024	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131922164	131922164	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131922164	131922164	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTR1	185	broad.mit.edu	37	3	148458798	148458798	+	5'UTR	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTR1	185	broad.mit.edu	37	3	148458798	148458798	+	5'UTR	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129008532	129008532	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129008532	129008532	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91660865	91660865	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91700233	91700233	+	Silent	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91660865	91660865	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91700233	91700233	+	Silent	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C3	8644	broad.mit.edu	37	10	5138691	5138691	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C3	8644	broad.mit.edu	37	10	5138691	5138691	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56203560	56203560	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56203560	56203560	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85680674	85680674	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85680674	85680674	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73957758	73957758	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117876197	117876197	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117876197	117876197	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21241854	21241854	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21241854	21241854	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC1	341	broad.mit.edu	37	19	45422551	45422551	+	3'UTR	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC1	341	broad.mit.edu	37	19	45422551	45422551	+	3'UTR	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL15	54622	broad.mit.edu	37	5	53467697	53467697	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL15	54622	broad.mit.edu	37	5	53467697	53467697	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100957385	100957385	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100957991	100957991	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100957385	100957385	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100957991	100957991	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197112595	197112595	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197112595	197112595	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATCAY	85300	broad.mit.edu	37	19	3918722	3918722	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATCAY	85300	broad.mit.edu	37	19	3918722	3918722	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28898967	28898968	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28898967	28898968	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10429876	10429876	+	Intron	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10429876	10429876	+	Intron	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5A1	498	broad.mit.edu	37	18	43671709	43671709	+	Missense_Mutation	SNP	C	T	T	rs146467617	byFrequency	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5A1	498	broad.mit.edu	37	18	43671709	43671709	+	Missense_Mutation	SNP	C	T	T	rs146467617	byFrequency	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70070756	70070756	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70070756	70070756	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP3	8938	broad.mit.edu	37	16	1392790	1392790	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP3	8938	broad.mit.edu	37	16	1392793	1392793	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP3	8938	broad.mit.edu	37	16	1392790	1392790	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP3	8938	broad.mit.edu	37	16	1392793	1392793	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134371229	134371229	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31611664	31611664	+	Intron	SNP	C	T	T	rs112300985		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAM	4059	broad.mit.edu	37	19	45314630	45314630	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAM	4059	broad.mit.edu	37	19	45314630	45314630	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41244550	41244550	+	Missense_Mutation	SNP	C	G	G	rs80357124		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf93	255352	broad.mit.edu	37	10	134755107	134755107	+	Silent	SNP	C	T	T	rs143120032		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf93	255352	broad.mit.edu	37	10	134755107	134755107	+	Silent	SNP	C	T	T	rs143120032		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97102361	97102361	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97102361	97102361	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf26	161502	broad.mit.edu	37	15	81440802	81440802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf26	161502	broad.mit.edu	37	15	81440802	81440802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf48	56985	broad.mit.edu	37	17	10614344	10614344	+	Silent	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf48	56985	broad.mit.edu	37	17	10614344	10614344	+	Silent	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf44	84167	broad.mit.edu	37	19	16611553	16611553	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf44	84167	broad.mit.edu	37	19	16611553	16611553	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247719676	247719676	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf150	148823	broad.mit.edu	37	1	247719676	247719676	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038823	75038823	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75038823	75038823	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	45987864	45987864	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106694260	106694260	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106694260	106694260	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63666936	63666936	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63666936	63666936	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf44	80006	broad.mit.edu	37	5	64956651	64956651	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf44	80006	broad.mit.edu	37	5	64956651	64956651	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976380	47976380	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47976380	47976380	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121624836	121624836	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121624836	121624836	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40723661	40723661	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40723661	40723661	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf41	80185	broad.mit.edu	37	8	33367455	33367455	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf41	80185	broad.mit.edu	37	8	33367455	33367455	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86158167	86158167	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA13	377677	broad.mit.edu	37	8	86158167	86158167	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49079354	49079354	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49079354	49079354	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18828084	18828084	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18828084	18828084	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX7	23492	broad.mit.edu	37	22	39530045	39530045	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC13	152206	broad.mit.edu	37	3	42777198	42777198	+	Splice_Site	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC13	152206	broad.mit.edu	37	3	42777198	42777198	+	Splice_Site	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR2	729230	broad.mit.edu	37	3	46399605	46399605	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR2	729230	broad.mit.edu	37	3	46399605	46399605	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72527484	72527484	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72527484	72527484	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58145430	58145430	+	Missense_Mutation	SNP	C	A	A	rs104894340		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58145430	58145430	+	Missense_Mutation	SNP	C	A	A	rs104894340		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDR1	1038	broad.mit.edu	37	X	139865753	139865753	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDR1	1038	broad.mit.edu	37	X	139865753	139865753	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48677227	48677227	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48677227	48677227	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214819010	214819010	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49089788	49089788	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49089788	49089788	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1	1105	broad.mit.edu	37	5	98204345	98204345	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1	1105	broad.mit.edu	37	5	98204358	98204358	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1	1105	broad.mit.edu	37	5	98204345	98204345	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1	1105	broad.mit.edu	37	5	98204358	98204358	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHID1	66005	broad.mit.edu	37	11	883320	883320	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHID1	66005	broad.mit.edu	37	11	883320	883320	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113509757	113509757	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19167845	19167845	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19167845	19167845	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLUL1	27098	broad.mit.edu	37	18	645015	645015	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLUL1	27098	broad.mit.edu	37	18	645015	645015	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87623926	87623926	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87623926	87623926	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNR1	1268	broad.mit.edu	37	6	88854698	88854698	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNR1	1268	broad.mit.edu	37	6	88854698	88854698	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG1	9382	broad.mit.edu	37	17	71197584	71197584	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG1	9382	broad.mit.edu	37	17	71197584	71197584	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227924124	227924124	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227924124	227924124	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS4	51138	broad.mit.edu	37	4	83984321	83984321	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS4	51138	broad.mit.edu	37	4	83984321	83984321	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129945750	129945750	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129945750	129945750	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131261579	131261579	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131261579	131261579	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1388758	1388788	+	Frame_Shift_Del	DEL	GCGGAGTGCCCGCCTGCTCACACGTGCCGAC	-	-	rs112233131	byFrequency;by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1388758	1388788	+	Frame_Shift_Del	DEL	GCGGAGTGCCCGCCTGCTCACACGTGCCGAC	-	-	rs112233131	byFrequency;by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRX	1406	broad.mit.edu	37	19	48342693	48342693	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRX	1406	broad.mit.edu	37	19	48342693	48342693	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2813306	2813306	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2813306	2813306	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSL3	392360	broad.mit.edu	37	9	90388437	90388437	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSL3	392360	broad.mit.edu	37	9	90388437	90388437	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16996511	16996511	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16996511	16996511	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC15	51503	broad.mit.edu	37	11	94705238	94705238	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC15	51503	broad.mit.edu	37	11	94705238	94705238	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf41	139212	broad.mit.edu	37	X	106466059	106466059	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf41	139212	broad.mit.edu	37	X	106466059	106466059	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYC1	1537	broad.mit.edu	37	8	145151666	145151692	+	Intron	DEL	GGCAGTGGGCATGTGGAATACTTCTCC	-	-	rs75325545		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39835326	39835326	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39835326	39835326	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4	10926	broad.mit.edu	37	7	87537236	87537236	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36379924	36379924	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36379924	36379924	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234358641	234358641	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234358641	234358641	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKE	8526	broad.mit.edu	37	17	54912529	54912529	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKE	8526	broad.mit.edu	37	17	54912529	54912529	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHDDS	79947	broad.mit.edu	37	1	26774059	26774059	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHDDS	79947	broad.mit.edu	37	1	26774059	26774059	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX40P1	653645	broad.mit.edu	37	17	58089105	58089106	+	Intron	DNP	GG	TT	TT			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX40P1	653645	broad.mit.edu	37	17	58089105	58089106	+	Intron	DNP	GG	TT	TT			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140954416	140954416	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140954416	140954416	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60566764	60566764	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60566764	60566764	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35154200	35154200	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35154200	35154200	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196664163	196664163	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196664163	196664163	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34514476	34514476	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34514476	34514476	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAL1	83544	broad.mit.edu	37	14	74125780	74125780	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAL1	83544	broad.mit.edu	37	14	74125780	74125780	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117677468	117677468	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117677468	117677468	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK1	1796	broad.mit.edu	37	2	74783669	74783669	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK1	1796	broad.mit.edu	37	2	74783669	74783669	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56371470	56371470	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56371470	56371470	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1D	1936	broad.mit.edu	37	8	144661906	144661906	+	3'UTR	SNP	C	T	T	rs139166610	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1D	1936	broad.mit.edu	37	8	144661906	144661906	+	3'UTR	SNP	C	T	T	rs139166610	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8017361	8017361	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8017361	8017361	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL4	6785	broad.mit.edu	37	6	80629227	80629227	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL4	6785	broad.mit.edu	37	6	80629227	80629227	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMID1	129080	broad.mit.edu	37	22	29650081	29650081	+	Intron	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225707424	225707424	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225707424	225707424	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132547093	132547093	+	Silent	SNP	A	G	G	rs28513925	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESX1	80712	broad.mit.edu	37	X	103499633	103499633	+	5'Flank	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	119108892	119108919	+	Intron	DEL	AGGAAGGAAGGAAGGAAGGAAGGGAGGG	-	-	rs72195120		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45725774	45725774	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45725774	45725774	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120C	54954	broad.mit.edu	37	X	54161289	54161289	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120C	54954	broad.mit.edu	37	X	54161289	54161289	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184863220	184863220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184863220	184863220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17653042	17653042	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17653042	17653042	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843425	24843425	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843425	24843425	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10088407	10088410	+	Splice_Site	DEL	AGTA	-	-	rs146316187		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARSA	2193	broad.mit.edu	37	19	13035487	13035487	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARSA	2193	broad.mit.edu	37	19	13035487	13035487	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92533924	92533924	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92533924	92533924	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40405804	40405804	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40405804	40405804	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125074159	125074159	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125074159	125074159	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153874673	153874673	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153874673	153874673	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142505602	142505602	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142505602	142505602	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58080588	58080588	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58080588	58080588	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49381586	49381586	+	5'UTR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49381586	49381586	+	5'UTR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL1	11167	broad.mit.edu	37	3	120115857	120115857	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL1	11167	broad.mit.edu	37	3	120115857	120115857	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP1	8880	broad.mit.edu	37	1	78428753	78428753	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP1	8880	broad.mit.edu	37	1	78428753	78428753	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT3	2525	broad.mit.edu	37	19	5844225	5844225	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT3	2525	broad.mit.edu	37	19	5844225	5844225	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR1	8087	broad.mit.edu	37	3	180680630	180680630	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR1	8087	broad.mit.edu	37	3	180680630	180680630	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151124166	151124166	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151124166	151124166	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171699063	171699063	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171699063	171699063	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT1	2589	broad.mit.edu	37	18	33282891	33282891	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT1	2589	broad.mit.edu	37	18	33283427	33283427	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT1	2589	broad.mit.edu	37	18	33282891	33282891	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT1	2589	broad.mit.edu	37	18	33283427	33283427	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9846411	9846411	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9846411	9846411	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP6	163351	broad.mit.edu	37	1	89846103	89846103	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP6	163351	broad.mit.edu	37	1	89846103	89846103	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM1	8521	broad.mit.edu	37	6	53010219	53010219	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM1	8521	broad.mit.edu	37	6	53010219	53010219	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233655925	233655925	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233655925	233655925	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74524978	74524978	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74524978	74524978	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129442039	129442039	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT1D1	144423	broad.mit.edu	37	12	129442039	129442039	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56226452	56226452	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56226452	56226452	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150349062	150349063	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150349062	150349063	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5C	55890	broad.mit.edu	37	17	72439809	72439809	+	Intron	DEL	G	-	-	rs3840056		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL2	79977	broad.mit.edu	37	8	102661776	102661776	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL2	79977	broad.mit.edu	37	8	102661776	102661776	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153029841	153029841	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153029841	153029841	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122537344	122537344	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122537344	122537344	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7915177	7915177	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7915177	7915177	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS7	55559	broad.mit.edu	37	X	152721988	152721988	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153217163	153217163	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153217163	153217163	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65185652	65185652	+	Intron	DEL	C	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65185652	65185652	+	Intron	DEL	C	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143095798	143095798	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143095798	143095798	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB1	3146	broad.mit.edu	37	13	31116932	31116932	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB1	3146	broad.mit.edu	37	13	31116932	31116932	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA6	3203	broad.mit.edu	37	7	27187160	27187160	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA6	3203	broad.mit.edu	37	7	27187160	27187160	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD8	3234	broad.mit.edu	37	2	176995902	176995903	+	Intron	INS	-	TA	TA	rs138795034	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNBP3	146713	broad.mit.edu	37	17	77116438	77116438	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNBP3	146713	broad.mit.edu	37	17	77116438	77116438	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191367	152191367	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191367	152191367	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB4P	664618	broad.mit.edu	37	15	58984338	58984338	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB4P	664618	broad.mit.edu	37	15	58984338	58984338	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F6	27179	broad.mit.edu	37	2	113763598	113763598	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F6	27179	broad.mit.edu	37	2	113763598	113763598	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70331244	70331244	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70331244	70331244	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41729294	41729294	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBA	3624	broad.mit.edu	37	7	41729294	41729294	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30789838	30789838	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30789838	30789838	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3649126	3649126	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3649126	3649126	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495497	30495497	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495497	30495497	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31341648	31341648	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31341648	31341648	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7614359	7614359	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7614359	7614359	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24537990	24537990	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24537990	24537990	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG1	182	broad.mit.edu	37	20	10626470	10626470	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG1	182	broad.mit.edu	37	20	10626470	10626470	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6055780	6055780	+	Silent	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6055780	6055780	+	Silent	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133184645	133184646	+	Intron	DEL	AC	-	-	rs138308682		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD4	386618	broad.mit.edu	37	13	45768147	45768147	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD4	386618	broad.mit.edu	37	13	45768147	45768147	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154512349	154512349	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154512349	154512349	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113697695	113697695	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113697695	113697695	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95508682	95508682	+	Silent	SNP	G	A	A	rs139309146		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95508682	95508682	+	Silent	SNP	G	A	A	rs139309146		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113375010	113375010	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113375010	113375010	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8931289	8931289	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8931289	8931289	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	21014237	21014237	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	21014237	21014237	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39761014	39761014	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39761014	39761014	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200950287	200950287	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200950287	200950287	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57971452	57971452	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47298931	47298931	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47298931	47298931	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55290180	55290180	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55290180	55290180	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL24	54800	broad.mit.edu	37	3	183382556	183382556	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL24	54800	broad.mit.edu	37	3	183382556	183382556	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL3	26249	broad.mit.edu	37	5	137034113	137034113	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL3	26249	broad.mit.edu	37	5	137034113	137034113	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49161339	49161339	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49161339	49161339	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARGE	9215	broad.mit.edu	37	22	33777749	33777749	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARGE	9215	broad.mit.edu	37	22	33777749	33777749	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109088908	109088908	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109088908	109088908	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48643129	48643129	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48643129	48643129	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPP	4026	broad.mit.edu	37	3	188426068	188426068	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPP	4026	broad.mit.edu	37	3	188426068	188426068	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141607652	141607652	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141607652	141607652	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4	64101	broad.mit.edu	37	7	127670635	127670635	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4	64101	broad.mit.edu	37	7	127670635	127670635	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70460372	70460372	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70460372	70460372	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85449619	85449619	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85449619	85449619	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40702915	40702915	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40702915	40702915	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L2	10459	broad.mit.edu	37	1	11740467	11740467	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L2	10459	broad.mit.edu	37	1	11740467	11740467	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB18	286514	broad.mit.edu	37	X	26157580	26157580	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB18	286514	broad.mit.edu	37	X	26157580	26157580	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A1	4121	broad.mit.edu	37	6	119522515	119522515	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A1	4121	broad.mit.edu	37	6	119522515	119522515	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185167766	185167766	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185167766	185167766	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161470184	161470184	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161470184	161470184	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	47969958	47969958	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT1	154141	broad.mit.edu	37	6	20102373	20102377	+	3'UTR	DEL	AAAAT	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART6	401612	broad.mit.edu	37	X	103349436	103349436	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART6	401612	broad.mit.edu	37	X	103349436	103349436	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150883660	150883660	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150903267	150903267	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150883660	150883660	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150903267	150903267	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37566052	37566052	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37566052	37566052	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116417342	116417342	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116417342	116417342	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67IP	84365	broad.mit.edu	37	2	122488554	122488554	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67IP	84365	broad.mit.edu	37	2	122488554	122488554	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKLN1	4289	broad.mit.edu	37	7	131113969	131113969	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKLN1	4289	broad.mit.edu	37	7	131113969	131113969	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLANA	2315	broad.mit.edu	37	9	5892506	5892506	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLANA	2315	broad.mit.edu	37	9	5892506	5892506	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151884816	151884816	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151884816	151884816	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGS	7841	broad.mit.edu	37	2	74690085	74690085	+	Silent	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGS	7841	broad.mit.edu	37	2	74690085	74690085	+	Silent	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123699212	123699212	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123706321	123706321	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123699212	123699212	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123706321	123706321	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MREG	55686	broad.mit.edu	37	2	216811893	216811893	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MREG	55686	broad.mit.edu	37	2	216811893	216811893	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL16	54948	broad.mit.edu	37	11	59575233	59575233	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL16	54948	broad.mit.edu	37	11	59575233	59575233	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1	4485	broad.mit.edu	37	3	49724892	49724892	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1	4485	broad.mit.edu	37	3	49724892	49724892	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149839952	149839952	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149839952	149839952	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26422991	26422991	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26422991	26422991	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69881674	69881674	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69881674	69881674	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145311442	145311442	+	Intron	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16900007	16900007	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16900007	16900007	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NET1	10276	broad.mit.edu	37	10	5494953	5494953	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NET1	10276	broad.mit.edu	37	10	5494953	5494953	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51288719	51288719	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51288719	51288719	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIP7	51388	broad.mit.edu	37	16	69373735	69373735	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIP7	51388	broad.mit.edu	37	16	69373735	69373735	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36985803	36985803	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36985803	36985803	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPSNAP1	8508	broad.mit.edu	37	22	29957768	29957768	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPSNAP1	8508	broad.mit.edu	37	22	29957768	29957768	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124604098	124604098	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124604098	124604098	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLE1	54475	broad.mit.edu	37	17	33460195	33460195	+	Silent	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLE1	54475	broad.mit.edu	37	17	33460195	33460195	+	Silent	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57063703	57063703	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57063703	57063703	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7079078	7079078	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7079078	7079078	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36322010	36322010	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36322010	36322010	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPL	80896	broad.mit.edu	37	1	182763626	182763626	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPL	80896	broad.mit.edu	37	1	182763626	182763626	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32724939	32724939	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32724939	32724939	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTN	27020	broad.mit.edu	37	15	73862486	73862486	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTN	27020	broad.mit.edu	37	15	73862486	73862486	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679303	88679303	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679303	88679303	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT11	55190	broad.mit.edu	37	X	51239057	51239057	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT11	55190	broad.mit.edu	37	X	51239057	51239057	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101623636	101623636	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228491841	228491841	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247694892	247694892	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247694892	247694892	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166400	248166400	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166400	248166400	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A5	81318	broad.mit.edu	37	11	51412143	51412143	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A5	81318	broad.mit.edu	37	11	51412143	51412143	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M8	219484	broad.mit.edu	37	11	56258676	56258676	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M8	219484	broad.mit.edu	37	11	56258676	56258676	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59361700	59361700	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59361700	59361700	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21730539	21730539	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21730539	21730539	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121605550	121605550	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121605550	121605550	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HTM	54681	broad.mit.edu	37	3	49042348	49042348	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HTM	54681	broad.mit.edu	37	3	49042350	49042350	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HTM	54681	broad.mit.edu	37	3	49042348	49042348	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HTM	54681	broad.mit.edu	37	3	49042350	49042350	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPN1	8106	broad.mit.edu	37	14	23776927	23776927	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPN1	8106	broad.mit.edu	37	14	23776927	23776927	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112705636	112705636	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112705636	112705636	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD5	64282	broad.mit.edu	37	16	50185488	50185488	+	5'Flank	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD5	64282	broad.mit.edu	37	16	50185488	50185488	+	5'Flank	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91675527	91675527	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91675527	91675527	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55912864	55912864	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55912864	55912864	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB11	56125	broad.mit.edu	37	5	140580730	140580730	+	Silent	SNP	C	T	T	rs114264306	byFrequency;by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC4	56098	broad.mit.edu	37	5	140865098	140865098	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC4	56098	broad.mit.edu	37	5	140865098	140865098	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105201505	105201505	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105201505	105201505	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDYN	5173	broad.mit.edu	37	20	1961296	1961296	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDYN	5173	broad.mit.edu	37	20	1961296	1961296	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45935329	45935329	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45935329	45935329	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK1	5230	broad.mit.edu	37	X	77373668	77373668	+	Splice_Site	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK1	5230	broad.mit.edu	37	X	77373668	77373668	+	Splice_Site	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF8	23133	broad.mit.edu	37	X	54029107	54029107	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF8	23133	broad.mit.edu	37	X	54029107	54029107	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30768316	30768316	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30768316	30768316	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39647380	39647380	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39647380	39647380	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNC1	26207	broad.mit.edu	37	17	65374344	65374344	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160836348	160836348	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160836348	160836348	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD1	79887	broad.mit.edu	37	12	14689793	14689793	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD1	79887	broad.mit.edu	37	12	14689793	14689793	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PM20D2	135293	broad.mit.edu	37	6	89868264	89868264	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PM20D2	135293	broad.mit.edu	37	6	89868264	89868264	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24722748	24722748	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24722748	24722748	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG2	11232	broad.mit.edu	37	17	62492601	62492601	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG2	11232	broad.mit.edu	37	17	62492601	62492601	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405004	7405004	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405004	7405004	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F2	5452	broad.mit.edu	37	19	42599884	42599884	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F2	5452	broad.mit.edu	37	19	42599884	42599884	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1D	8493	broad.mit.edu	37	17	58725387	58725387	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1D	8493	broad.mit.edu	37	17	58725387	58725387	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1J	333926	broad.mit.edu	37	1	113253122	113253122	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1J	333926	broad.mit.edu	37	1	113253122	113253122	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204379201	204379201	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204379201	204379201	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF38A	84950	broad.mit.edu	37	1	52870579	52870579	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF38A	84950	broad.mit.edu	37	1	52870579	52870579	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43773663	43773663	+	5'UTR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43773663	43773663	+	5'UTR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8518128	8518128	+	Silent	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8518128	8518128	+	Silent	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS3	83480	broad.mit.edu	37	11	125765210	125765210	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS3	83480	broad.mit.edu	37	11	125765210	125765210	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXN	5829	broad.mit.edu	37	12	120651681	120651681	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXN	5829	broad.mit.edu	37	12	120651681	120651681	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRT1	81890	broad.mit.edu	37	19	10823252	10823252	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRT1	81890	broad.mit.edu	37	19	10823252	10823252	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3D	9545	broad.mit.edu	37	19	11446296	11446296	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3D	9545	broad.mit.edu	37	19	11446296	11446296	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174190066	174190066	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174190066	174190066	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155129369	155129369	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155129369	155129369	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCC2	55920	broad.mit.edu	37	1	17755624	17755624	+	Silent	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCC2	55920	broad.mit.edu	37	1	17755624	17755624	+	Silent	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH8	50700	broad.mit.edu	37	19	10132207	10132207	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH8	50700	broad.mit.edu	37	19	10132207	10132207	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79364202	79364202	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79364202	79364202	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103557405	103557405	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103557405	103557405	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85576437	85576437	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85576586	85576586	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85576437	85576437	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85576586	85576586	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD3	158234	broad.mit.edu	37	9	37770040	37770040	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73048996	73048996	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73048996	73048996	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	100990155	100990155	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	100990155	100990155	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163042677	163042677	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCE	6006	broad.mit.edu	37	1	25712420	25712420	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCE	6006	broad.mit.edu	37	1	25712420	25712420	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOQ	23433	broad.mit.edu	37	2	46770874	46770874	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31515172	31515172	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31515172	31515172	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63509899	63509899	+	Missense_Mutation	SNP	A	T	T	rs142108516		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63509899	63509899	+	Missense_Mutation	SNP	A	T	T	rs142108516		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	79067493	79067493	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	79067493	79067493	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18622485	18622485	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18622485	18622485	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL30	6156	broad.mit.edu	37	8	99054903	99054904	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL30	6156	broad.mit.edu	37	8	99054903	99054904	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1B	58490	broad.mit.edu	37	20	36676873	36676874	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1B	58490	broad.mit.edu	37	20	36676873	36676874	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM1	6240	broad.mit.edu	37	11	4142838	4142838	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM1	6240	broad.mit.edu	37	11	4142838	4142838	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP7B	91695	broad.mit.edu	37	22	42974026	42974026	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67865080	67865080	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67865080	67865080	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237804323	237804323	+	Intron	SNP	G	T	T	rs76265079	byFrequency;by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237804323	237804323	+	Intron	SNP	G	T	T	rs76265079	byFrequency;by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47456233	47456233	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47456482	47456482	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47456639	47456639	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47456233	47456233	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47456482	47456482	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47456639	47456639	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML1	6322	broad.mit.edu	37	X	17762333	17762333	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML1	6322	broad.mit.edu	37	X	17762333	17762333	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1D	6339	broad.mit.edu	37	1	1222560	1222560	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1D	6339	broad.mit.edu	37	1	1222560	1222560	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83640502	83640502	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE2	5270	broad.mit.edu	37	2	224847476	224847476	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE2	5270	broad.mit.edu	37	2	224847476	224847476	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30972797	30972797	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30972797	30972797	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB2	83852	broad.mit.edu	37	13	50059943	50059943	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB2	83852	broad.mit.edu	37	13	50059943	50059943	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70572904	70572904	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70572904	70572904	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFI1	9814	broad.mit.edu	37	22	31924785	31924785	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFI1	9814	broad.mit.edu	37	22	31924785	31924785	+	Silent	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7212852	7212852	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7212852	7212852	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS16	11129	broad.mit.edu	37	19	45559743	45559743	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS16	11129	broad.mit.edu	37	19	45559743	45559743	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPB	6439	broad.mit.edu	37	2	85894748	85894749	+	Intron	DNP	CC	AA	AA			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPB	6439	broad.mit.edu	37	2	85894748	85894749	+	Intron	DNP	CC	AA	AA			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK2	10110	broad.mit.edu	37	20	42195207	42195207	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK2	10110	broad.mit.edu	37	20	42195207	42195207	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84245390	84245390	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84245390	84245390	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940731	154940731	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940731	154940731	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149116	52149116	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149116	52149116	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100838105	100838105	+	3'UTR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100838105	100838105	+	3'UTR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT3	23410	broad.mit.edu	37	11	216895	216895	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT3	23410	broad.mit.edu	37	11	216895	216895	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164725726	164725726	+	Missense_Mutation	SNP	C	T	T	rs145734588	byFrequency	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15079239	15079239	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A6	6511	broad.mit.edu	37	19	15079239	15079239	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A32	81034	broad.mit.edu	37	8	104426906	104426907	+	Intron	DEL	AC	-	-	rs59125759		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205890767	205890767	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205890767	205890767	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27480930	27480930	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27480930	27480930	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A11	201266	broad.mit.edu	37	17	70732859	70732859	+	Splice_Site	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A11	201266	broad.mit.edu	37	17	70732859	70732859	+	Splice_Site	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156248853	156248853	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156248853	156248853	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP29	9342	broad.mit.edu	37	22	21213381	21213381	+	5'UTR	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX13	23161	broad.mit.edu	37	7	17931279	17931279	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX13	23161	broad.mit.edu	37	7	17931279	17931279	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16077504	16077504	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16077504	16077504	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231108311	231108311	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231108311	231108311	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA1	81833	broad.mit.edu	37	6	88773997	88773997	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA1	81833	broad.mit.edu	37	6	88773997	88773997	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	215274887	215274887	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	215274887	215274887	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA5	166378	broad.mit.edu	37	4	124235149	124235149	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA5	166378	broad.mit.edu	37	4	124235149	124235149	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK1	6695	broad.mit.edu	37	5	136328349	136328349	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK1	6695	broad.mit.edu	37	5	136328349	136328349	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQRDL	58472	broad.mit.edu	37	15	45981368	45981368	+	Silent	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQRDL	58472	broad.mit.edu	37	15	45981368	45981368	+	Silent	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRMS	6725	broad.mit.edu	37	20	62178813	62178813	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRMS	6725	broad.mit.edu	37	20	62178813	62178813	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153043799	153043799	+	5'Flank	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK3	26576	broad.mit.edu	37	X	153043799	153043799	+	5'Flank	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182763893	182763893	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	28030135	28030135	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	28030135	28030135	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76779523	76779523	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	76779523	76779523	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM	8027	broad.mit.edu	37	10	17738948	17738948	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM	8027	broad.mit.edu	37	10	17738948	17738948	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130427644	130427644	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130427644	130427644	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2A	6871	broad.mit.edu	37	17	35798038	35798038	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2A	6871	broad.mit.edu	37	17	35798038	35798038	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2B	93624	broad.mit.edu	37	4	7056332	7056332	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2B	93624	broad.mit.edu	37	4	7056332	7056332	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60584215	60584215	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60584236	60584236	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60584215	60584215	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60584236	60584236	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC2	26115	broad.mit.edu	37	17	61498475	61498475	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC2	26115	broad.mit.edu	37	17	61498475	61498475	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R40	259286	broad.mit.edu	37	7	142919080	142919080	+	5'Flank	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R40	259286	broad.mit.edu	37	7	142919080	142919080	+	5'Flank	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAT	6898	broad.mit.edu	37	16	71604652	71604652	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAT	6898	broad.mit.edu	37	16	71604652	71604652	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9661094	9661094	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9661094	9661094	+	Intron	SNP	A	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79282899	79282899	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79282899	79282899	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151742560	151742588	+	3'UTR	DEL	GGAGAGGGAGACCATGGGGAGACGGAGAC	-	-	rs140076465	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138373849	138373849	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138373849	138373849	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD2	166815	broad.mit.edu	37	4	90034222	90034222	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD2	166815	broad.mit.edu	37	4	90034222	90034222	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR7	51284	broad.mit.edu	37	X	12904699	12904699	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR7	51284	broad.mit.edu	37	X	12904699	12904699	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC8	147138	broad.mit.edu	37	17	76129661	76129661	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC8	147138	broad.mit.edu	37	17	76129661	76129661	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO4	255104	broad.mit.edu	37	1	20020902	20020902	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO4	255104	broad.mit.edu	37	1	20020902	20020902	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM151A	256472	broad.mit.edu	37	11	66062484	66062484	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM151A	256472	broad.mit.edu	37	11	66062484	66062484	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM184A	202915	broad.mit.edu	37	7	1586653	1586654	+	In_Frame_Ins	INS	-	GCC	GCC	rs140579959	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69100155	69100155	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69100155	69100155	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60028991	60028991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60028991	60028991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57089342	57089342	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57089342	57089342	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1947513	1947513	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1947513	1947513	+	Intron	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40697001	40697001	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40697001	40697001	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39728776	39728776	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39728776	39728776	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24306971	24306971	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577081	7577081	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577081	7577081	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP1	1200	broad.mit.edu	37	11	6636182	6636182	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP1	1200	broad.mit.edu	37	11	6636182	6636182	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2A	29896	broad.mit.edu	37	7	23556279	23556279	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2A	29896	broad.mit.edu	37	7	23556279	23556279	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC6B	122553	broad.mit.edu	37	14	39628703	39628703	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC6B	122553	broad.mit.edu	37	14	39628703	39628703	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55038191	55038191	+	3'UTR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55038191	55038191	+	3'UTR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31342956	31342956	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31342956	31342956	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN34	79042	broad.mit.edu	37	19	54696204	54696204	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN34	79042	broad.mit.edu	37	19	54696204	54696204	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKS	60385	broad.mit.edu	37	19	50250812	50250812	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSKS	60385	broad.mit.edu	37	19	50250812	50250812	+	Intron	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40093098	40093098	+	Silent	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40093098	40093098	+	Silent	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84383358	84383358	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179479392	179479392	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179479392	179479392	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWSG1	57045	broad.mit.edu	37	18	9396447	9396447	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWSG1	57045	broad.mit.edu	37	18	9396447	9396447	+	Silent	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19410972	19410972	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19410972	19410972	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96624892	96624892	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96624892	96624892	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69682206	69682206	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69682206	69682206	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43560622	43560622	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP48	84196	broad.mit.edu	37	1	22030794	22030794	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP48	84196	broad.mit.edu	37	1	22030794	22030794	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8994541	8994541	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8994541	8994541	+	Intron	SNP	T	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30207441	30207441	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30207441	30207441	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4351563	4351563	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56280533	56280533	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19971974	19971974	+	IGR	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097150	20097150	+	IGR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070179	22070179	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53229854	53229854	+	IGR	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51679769	51679769	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	10162134	10162134	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	41155070	41155070	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	47501858	47501858	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70623391	70623391	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	236275238	236275246	+	IGR	DEL	AACATTGAA	-	-	rs56332841		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	47208778	47208778	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194142440	194142440	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	20806107	20806107	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	234494915	234494915	+	IGR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97691802	97691802	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97692140	97692140	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	110401962	110401962	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	174095752	174095752	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580433	18580433	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	151948708	151948708	+	IGR	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	12514213	12514236	+	IGR	DEL	CACACACACACACACACACACGCG	-	-	rs145031469	by1000genomes	TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	77372446	77372446	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707621	144707621	+	IGR	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48943460	48943460	+	IGR	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57069702	57069702	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124460838	124460838	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137570183	137570183	+	IGR	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	24326553	24326553	+	IGR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4351563	4351563	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56280533	56280533	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19971974	19971974	+	IGR	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097150	20097150	+	IGR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070179	22070179	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53229854	53229854	+	IGR	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51679769	51679769	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	10162134	10162134	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	41155070	41155070	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	47501858	47501858	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70623391	70623391	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47984802	47984802	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	47208778	47208778	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	20806107	20806107	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	234494915	234494915	+	IGR	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800054	91800054	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97691802	97691802	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97692140	97692140	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	110401962	110401962	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	174095752	174095752	+	IGR	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	18580433	18580433	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	151948708	151948708	+	IGR	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	77372446	77372446	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707621	144707621	+	IGR	SNP	A	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48943460	48943460	+	IGR	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57069702	57069702	+	IGR	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	124460838	124460838	+	IGR	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137570183	137570183	+	IGR	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85341097	85341097	+	IGR	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2	375567	broad.mit.edu	37	7	49842429	49842430	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2	375567	broad.mit.edu	37	7	49842429	49842430	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY1	57590	broad.mit.edu	37	2	224759080	224759080	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY1	57590	broad.mit.edu	37	2	224759127	224759127	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY1	57590	broad.mit.edu	37	2	224759080	224759080	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY1	57590	broad.mit.edu	37	2	224759127	224759127	+	Intron	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74920199	74920199	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74920199	74920199	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85559916	85559916	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85559916	85559916	+	Intron	SNP	G	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47569697	47569697	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47569697	47569697	+	Silent	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC12	170261	broad.mit.edu	37	X	117960105	117960105	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC12	170261	broad.mit.edu	37	X	117960105	117960105	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77912563	77912563	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77913582	77913582	+	Silent	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77912563	77912563	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77913582	77913582	+	Silent	SNP	T	C	C			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50704831	50704831	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50704831	50704831	+	Intron	SNP	A	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF182	7569	broad.mit.edu	37	X	47835779	47835779	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF182	7569	broad.mit.edu	37	X	47835779	47835779	+	Silent	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22272062	22272062	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22272062	22272062	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF275	10838	broad.mit.edu	37	X	152610044	152610044	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF275	10838	broad.mit.edu	37	X	152610044	152610044	+	Intron	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506452	178506452	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506452	178506452	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF41	7592	broad.mit.edu	37	X	47308566	47308566	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF41	7592	broad.mit.edu	37	X	47308566	47308566	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF616	90317	broad.mit.edu	37	19	52618739	52618739	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF616	90317	broad.mit.edu	37	19	52618739	52618739	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF763	284390	broad.mit.edu	37	19	12087895	12087895	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF763	284390	broad.mit.edu	37	19	12087895	12087895	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25487062	25487062	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29332358	29332358	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	13790980	13790980	+	5'Flank	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47577470	47577470	+	Intron	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47577755	47577755	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30978288	30978289	+	5'Flank	INS	-	AGTTT	AGTTT	rs71023602		TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25487062	25487062	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29332358	29332358	+	Intron	SNP	C	A	A			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	13790980	13790980	+	5'Flank	SNP	C	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47577470	47577470	+	Intron	SNP	T	G	G			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47577755	47577755	+	Intron	SNP	G	T	T			TCGA-44-3396-01A-01D-1265-08	TCGA-44-3396-10A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
