Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA5	23461	broad.mit.edu	37	17	67300882	67300882	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA5	23461	broad.mit.edu	37	17	67300882	67300882	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA7	10347	broad.mit.edu	37	19	1051732	1051732	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48261885	48261885	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48261885	48261885	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40029887	40029887	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106552799	106552799	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33614566	33614566	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33614566	33614566	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5146226	5146226	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5146226	5146226	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK2	90956	broad.mit.edu	37	7	140380905	140380905	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK2	90956	broad.mit.edu	37	7	140380905	140380905	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY3	109	broad.mit.edu	37	2	25046044	25046044	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY3	109	broad.mit.edu	37	2	25046044	25046044	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHRR	57491	broad.mit.edu	37	5	353963	353963	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHRR	57491	broad.mit.edu	37	5	353963	353963	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHSG	197	broad.mit.edu	37	3	186338327	186338327	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129264072	129264072	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129264072	129264072	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91667886	91667886	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91667886	91667886	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B15	441282	broad.mit.edu	37	7	134261164	134261164	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B15	441282	broad.mit.edu	37	7	134261164	134261164	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH16A1	126133	broad.mit.edu	37	19	49964050	49964050	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH8A1	64577	broad.mit.edu	37	6	135239890	135239890	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH8A1	64577	broad.mit.edu	37	6	135239890	135239890	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1L2	644974	broad.mit.edu	37	3	129812063	129812063	+	Intron	SNP	A	G	G	rs150469571	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1	56052	broad.mit.edu	37	16	5129739	5129739	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1P	200420	broad.mit.edu	37	2	73901983	73901983	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1P	200420	broad.mit.edu	37	2	73901983	73901983	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233244768	233244768	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202593271	202593271	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202609145	202609145	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202593271	202593271	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202609145	202609145	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56396498	56396498	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56396498	56396498	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115231457	115231457	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115231457	115231457	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC4	29945	broad.mit.edu	37	4	25384857	25384857	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC4	29945	broad.mit.edu	37	4	25384857	25384857	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD10	55608	broad.mit.edu	37	13	111535917	111535917	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A3	441425	broad.mit.edu	37	9	67952114	67952114	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD28	23243	broad.mit.edu	37	3	15836820	15836820	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD28	23243	broad.mit.edu	37	3	15836820	15836820	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99837534	99837534	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99837534	99837534	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO7	50636	broad.mit.edu	37	2	242162768	242162768	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA8	653145	broad.mit.edu	37	10	47133423	47133423	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA8	653145	broad.mit.edu	37	10	47133423	47133423	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3D1	8943	broad.mit.edu	37	19	2127038	2127038	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227027	21227027	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOH	350	broad.mit.edu	37	17	64208360	64208360	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOH	350	broad.mit.edu	37	17	64208360	64208360	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP1	27236	broad.mit.edu	37	4	153750762	153750762	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69034512	69034512	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69034512	69034512	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17960914	17960914	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17960914	17960914	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL5B	221079	broad.mit.edu	37	10	18948604	18948604	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109274604	109274604	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109274604	109274604	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC1	51008	broad.mit.edu	37	10	73950276	73950276	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC1	51008	broad.mit.edu	37	10	73950276	73950276	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMT	438	broad.mit.edu	37	X	1743385	1743385	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPA	443	broad.mit.edu	37	17	3385072	3385072	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPA	443	broad.mit.edu	37	17	3385072	3385072	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197104226	197104226	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197104226	197104226	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176998757	176998757	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176998757	176998757	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10382279	10382279	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10382279	10382279	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1B1	525	broad.mit.edu	37	2	71191572	71191573	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATPBD4	89978	broad.mit.edu	37	15	35692912	35692912	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR2	554	broad.mit.edu	37	X	153171455	153171455	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR2	554	broad.mit.edu	37	X	153171455	153171455	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT1	2583	broad.mit.edu	37	12	58023958	58023958	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT1	2583	broad.mit.edu	37	12	58023958	58023958	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11049524	11049524	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	59469394	59469394	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32520796	32520796	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLCAP	10904	broad.mit.edu	37	20	36159051	36159051	+	5'Flank	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLCAP	10904	broad.mit.edu	37	20	36159051	36159051	+	5'Flank	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC1	646	broad.mit.edu	37	15	83926569	83926569	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL2	254240	broad.mit.edu	37	22	32841723	32841723	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36964032	36964032	+	Missense_Mutation	SNP	C	A	A	rs143433981		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36964032	36964032	+	Missense_Mutation	SNP	C	A	A	rs143433981		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79942333	79942333	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100613339	100613339	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100613339	100613339	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5791895	5791895	+	Missense_Mutation	SNP	G	A	A	rs147954390	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf53	282966	broad.mit.edu	37	10	50916417	50916417	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf53	282966	broad.mit.edu	37	10	50916417	50916417	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf71	118461	broad.mit.edu	37	10	50531828	50531828	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf10	746	broad.mit.edu	37	11	61559843	61559843	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf16	56673	broad.mit.edu	37	11	8947732	8947733	+	Intron	INS	-	TTT	TTT	rs147920860		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97051666	97051666	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf105	55195	broad.mit.edu	37	14	57960335	57960335	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf105	55195	broad.mit.edu	37	14	57960335	57960335	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf55	256646	broad.mit.edu	37	15	34648810	34648810	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf55	256646	broad.mit.edu	37	15	34648810	34648810	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf86	654434	broad.mit.edu	37	17	75085227	75085227	+	Intron	DEL	C	-	-	rs67134689		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf26	284254	broad.mit.edu	37	18	52258617	52258617	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf57	79173	broad.mit.edu	37	19	14003571	14003571	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf123	54987	broad.mit.edu	37	1	53684521	53684522	+	Intron	INS	-	G	G	rs113593194	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf118	140711	broad.mit.edu	37	20	35507615	35507615	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20051412	20051412	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20051422	20051422	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74834436	74834436	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74834436	74834436	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6697480	6697481	+	Frame_Shift_Ins	INS	-	G	G	rs137956083		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf27	23434	broad.mit.edu	37	3	128292256	128292256	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf27	23434	broad.mit.edu	37	3	128292256	128292256	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175763780	175763780	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175763780	175763780	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36200221	36200221	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36200221	36200221	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41158735	41158735	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41158735	41158735	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf186	728464	broad.mit.edu	37	6	110620368	110620368	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf186	728464	broad.mit.edu	37	6	110620368	110620368	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf58	352999	broad.mit.edu	37	6	127911207	127911207	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf58	352999	broad.mit.edu	37	6	127911207	127911207	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40934407	40934407	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40934407	40934407	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf25	79020	broad.mit.edu	37	7	42950014	42950014	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24432038	24432038	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24432038	24432038	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2224402	2224402	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2716322	2716322	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2716322	2716322	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181480554	181480554	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181480554	181480554	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANT1	124583	broad.mit.edu	37	17	76992923	76992923	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANT1	124583	broad.mit.edu	37	17	76992923	76992923	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110496262	110496262	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110496262	110496262	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104874188	104874188	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104874188	104874188	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31690852	31690852	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31690852	31690852	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC150	284992	broad.mit.edu	37	2	197550941	197550941	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262398	158262398	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262398	158262398	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149938920	149938920	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149938920	149938920	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227218999	227218999	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227218999	227218999	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42EP1	11135	broad.mit.edu	37	22	37964344	37964344	+	Silent	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537699	24537699	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21842294	21842294	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19747498	19747499	+	Intron	INS	-	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73270728	73270728	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73270728	73270728	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58587465	58587465	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58145230	58145230	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58145230	58145230	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL1	8814	broad.mit.edu	37	14	50877348	50877348	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL1	8814	broad.mit.edu	37	14	50877348	50877348	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11047364	11047364	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11047364	11047364	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88472797	88472797	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196696128	196696128	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196696128	196696128	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50828375	50828375	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6208958	6208958	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	419496	419496	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	419496	419496	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB3	1142	broad.mit.edu	37	8	42565702	42565702	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC16A	23274	broad.mit.edu	37	16	11073250	11073250	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10280534	10280534	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMKLR1	1240	broad.mit.edu	37	12	108686420	108686420	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMKLR1	1240	broad.mit.edu	37	12	108686420	108686420	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87755667	87755667	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87755667	87755667	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1427297	1427297	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1427297	1427297	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG3	83548	broad.mit.edu	37	13	46060600	46060600	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	106898754	106898754	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	56029202	56029202	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	56029202	56029202	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110862504	110862504	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110862504	110862504	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ7	10229	broad.mit.edu	37	16	19087069	19087069	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ7	10229	broad.mit.edu	37	16	19087069	19087069	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211473091	211473091	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211473091	211473091	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L3	84699	broad.mit.edu	37	19	4168422	4168422	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSAG1	158511	broad.mit.edu	37	X	151904572	151904572	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSAG1	158511	broad.mit.edu	37	X	151904572	151904572	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149456665	149456665	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34312507	34312507	+	Silent	SNP	G	A	A	rs143306375		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34312507	34312507	+	Silent	SNP	G	A	A	rs143306375		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113648994	113648994	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988081	113988081	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114186033	114186033	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113648994	113648994	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988081	113988081	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114186033	114186033	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1G2	1455	broad.mit.edu	37	19	1969835	1969835	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56099110	56099110	+	Missense_Mutation	SNP	C	T	T	rs147244405	byFrequency	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	10981718	10981718	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111786210	111786210	+	3'UTR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf40B	541578	broad.mit.edu	37	X	149101918	149101918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf40B	541578	broad.mit.edu	37	X	149101918	149101918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf61	203413	broad.mit.edu	37	X	115593061	115593061	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf61	203413	broad.mit.edu	37	X	115593061	115593061	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F22	126410	broad.mit.edu	37	19	15651310	15651310	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F22	126410	broad.mit.edu	37	19	15651310	15651310	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS2	55157	broad.mit.edu	37	1	173797448	173797448	+	Intron	DEL	T	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX1	120237	broad.mit.edu	37	11	20177828	20177828	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX1	120237	broad.mit.edu	37	11	20177828	20177828	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997129	27997129	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997129	27997129	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCD	117159	broad.mit.edu	37	12	55039270	55039270	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX49	54555	broad.mit.edu	37	19	19033422	19033422	+	Silent	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX49	54555	broad.mit.edu	37	19	19033422	19033422	+	Silent	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49989652	49989652	+	5'UTR	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49989652	49989652	+	5'UTR	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65998421	65998421	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65998421	65998421	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX36	170506	broad.mit.edu	37	3	154007624	154007624	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69718462	69718462	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG3	1741	broad.mit.edu	37	X	69718462	69718462	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78325854	78325854	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78325854	78325854	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTA1	63951	broad.mit.edu	37	9	22451961	22451961	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196636546	196636546	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183586872	183586872	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63009375	63009375	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134017473	134017473	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28663009	28663009	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117340757	117340757	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117340757	117340757	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45401234	45401234	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	345693	345693	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103182882	103182882	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103182882	103182882	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71839796	71839797	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158526271	158526276	+	Intron	DEL	GCTGCC	-	-	rs10537975		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83433308	83433308	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52355189	52355189	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52380598	52380598	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52355189	52355189	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42937719	42937719	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD2	9343	broad.mit.edu	37	17	42937719	42937719	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55259515	55259515	+	Missense_Mutation	SNP	T	G	G	rs121434568		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55259515	55259515	+	Missense_Mutation	SNP	T	G	G	rs121434568		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23701585	23701585	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23701585	23701585	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79357454	79357454	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79357454	79357454	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMID2	136227	broad.mit.edu	37	7	101200597	101200597	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMID2	136227	broad.mit.edu	37	7	101200597	101200597	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6901606	6901606	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6935052	6935052	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6935052	6935052	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR2	30817	broad.mit.edu	37	19	14884604	14884604	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO3	2027	broad.mit.edu	37	17	4857038	4857038	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132147130	132147130	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132147130	132147130	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132510236	132510236	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132510236	132510236	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132547087	132547087	+	Silent	SNP	G	A	A	rs12366766		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132547093	132547093	+	Silent	SNP	A	G	G	rs28513925	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131186710	131186710	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5437893	5437893	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111643269	111643269	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111643269	111643269	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4B	54566	broad.mit.edu	37	9	112018498	112018498	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4B	54566	broad.mit.edu	37	9	112018498	112018498	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89259778	89259778	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89259778	89259778	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220174371	220174371	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220174371	220174371	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56270454	56270454	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56270454	56270454	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC8	1161	broad.mit.edu	37	5	60188174	60188174	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC8	1161	broad.mit.edu	37	5	60188174	60188174	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR2	2100	broad.mit.edu	37	14	64726780	64726780	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC7	23016	broad.mit.edu	37	3	45038682	45038682	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC7	23016	broad.mit.edu	37	3	45038682	45038682	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113797968	113797968	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154158393	154158393	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154130515	154130515	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154158393	154158393	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51425402	51425402	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51425402	51425402	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM114A2	10827	broad.mit.edu	37	5	153382025	153382025	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126B	285172	broad.mit.edu	37	2	201927872	201927872	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17643134	17643134	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129C	199786	broad.mit.edu	37	19	17643134	17643134	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71190773	71190773	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71190773	71190773	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM149B1	317662	broad.mit.edu	37	10	74960493	74960493	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29245210	29245210	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212799160	212799160	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212799160	212799160	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531939	92531939	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92623916	92623916	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531939	92531939	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92623916	92623916	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8196624	8196625	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO34	55030	broad.mit.edu	37	14	55880641	55880641	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO34	55030	broad.mit.edu	37	14	55880641	55880641	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161518542	161518542	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161518542	161518542	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111749507	111749507	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF23	8074	broad.mit.edu	37	12	4479490	4479490	+	3'UTR	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIZ1	84922	broad.mit.edu	37	19	56109048	56109048	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128496848	128496848	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128496848	128496848	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3LG	2323	broad.mit.edu	37	19	49983708	49983708	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC7	163479	broad.mit.edu	37	1	109271181	109271181	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC7	163479	broad.mit.edu	37	1	109271181	109271181	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424358	89424358	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114270018	114270018	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114270018	114270018	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39454487	39454487	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12693116	12693116	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12693116	12693116	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17472629	17472629	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17472629	17472629	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101235551	101235551	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101235551	101235551	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA5	2558	broad.mit.edu	37	15	27128556	27128556	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA5	2558	broad.mit.edu	37	15	27128556	27128556	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR2	2570	broad.mit.edu	37	6	89978866	89978866	+	Missense_Mutation	SNP	C	T	T	rs74923708	byFrequency;by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT9	50614	broad.mit.edu	37	12	132685656	132685656	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151664369	151664369	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151664369	151664369	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153825533	153825533	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153825533	153825533	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72623709	72623709	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72623709	72623709	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD2	54857	broad.mit.edu	37	X	69645582	69645582	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD2	54857	broad.mit.edu	37	X	69645582	69645582	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31013682	31013682	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31013682	31013682	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA10	84694	broad.mit.edu	37	6	90605805	90605805	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA10	84694	broad.mit.edu	37	6	90605805	90605805	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30695455	30695456	+	Intron	INS	-	TT	TT			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK	2710	broad.mit.edu	37	X	30695455	30695456	+	Intron	INS	-	TT	TT			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121747600	121747600	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175649854	175649854	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175649854	175649854	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6A	342096	broad.mit.edu	37	15	74365054	74365054	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167728078	167728078	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167728078	167728078	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOSR1	9527	broad.mit.edu	37	17	28808413	28808413	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20331132	20331132	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20331132	20331132	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135475654	135475654	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135475654	135475654	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR123	84435	broad.mit.edu	37	10	134886239	134886239	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR142	350383	broad.mit.edu	37	17	72368476	72368476	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR142	350383	broad.mit.edu	37	17	72368476	72368476	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150345446	150345446	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150345446	150345446	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR50	9248	broad.mit.edu	37	X	150349744	150349744	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19028759	19028759	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89920950	89920950	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89920950	89920950	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19871805	19871805	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5B	51704	broad.mit.edu	37	16	19871805	19871805	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1A	57655	broad.mit.edu	37	19	35500129	35500129	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1A	57655	broad.mit.edu	37	19	35500129	35500129	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123468867	123468867	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105481708	105481709	+	5'UTR	DNP	GG	CT	CT			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105481708	105481709	+	5'UTR	DNP	GG	CT	CT			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104335780	104335780	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS4	54930	broad.mit.edu	37	14	23421768	23421768	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS4	54930	broad.mit.edu	37	14	23421768	23421768	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236749502	236749502	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEBP1	50865	broad.mit.edu	37	12	13128336	13128336	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124731954	124731954	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124731954	124731954	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65420411	65420411	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65420411	65420411	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63918305	63918306	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28424343	28424343	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28424343	28424343	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75185675	75185675	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139299279	139299279	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK2	29911	broad.mit.edu	37	19	12875938	12875938	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK2	29911	broad.mit.edu	37	19	12875938	12875938	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC8	3224	broad.mit.edu	37	12	54403537	54403537	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC8	3224	broad.mit.edu	37	12	54403537	54403537	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS1BP3	64342	broad.mit.edu	37	2	20824527	20824527	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS1BP3	64342	broad.mit.edu	37	2	20824527	20824527	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53607826	53607826	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148564704	148564704	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148564704	148564704	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT2	3433	broad.mit.edu	37	10	91061832	91061832	+	5'UTR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT2	3433	broad.mit.edu	37	10	91061832	91061832	+	5'UTR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151164070	151164070	+	Silent	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151162731	151162731	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130416319	130416319	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130416319	130416319	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160063924	160063925	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IHH	3549	broad.mit.edu	37	2	219920175	219920175	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IHH	3549	broad.mit.edu	37	2	219920175	219920175	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RD	54756	broad.mit.edu	37	3	57168353	57168353	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RD	54756	broad.mit.edu	37	3	57168353	57168353	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	105011313	105011313	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	105011313	105011313	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35856920	35856920	+	5'Flank	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71948208	71948209	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48726111	48726111	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48726111	48726111	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977623	107977623	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX4	50805	broad.mit.edu	37	5	1879706	1879706	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX6	79190	broad.mit.edu	37	16	55361675	55361675	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX6	79190	broad.mit.edu	37	16	55361675	55361675	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48149606	48149606	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37514988	37514988	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37514988	37514988	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31409287	31409287	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31273080	31273080	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31273080	31273080	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2B	8850	broad.mit.edu	37	3	20167606	20167606	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2B	8850	broad.mit.edu	37	3	20167606	20167606	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137722285	137722285	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137722285	137722285	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142655387	142655387	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142655387	142655387	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19564614	19564614	+	Missense_Mutation	SNP	T	C	C	rs144675935		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19564614	19564614	+	Missense_Mutation	SNP	T	C	C	rs144675935		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43907004	43907004	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43907004	43907004	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0913	23053	broad.mit.edu	37	10	75548819	75548819	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123229169	123229169	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123229169	123229169	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1383	54627	broad.mit.edu	37	1	232941151	232941151	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1522	57648	broad.mit.edu	37	1	33233494	33233495	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1900276	1900276	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1900276	1900276	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF20B	9585	broad.mit.edu	37	10	91474693	91474693	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51900791	51900791	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51900791	51900791	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL34	257240	broad.mit.edu	37	X	21674559	21674559	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86880894	86880894	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRG1	10219	broad.mit.edu	37	12	9148021	9148021	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KREMEN1	83999	broad.mit.edu	37	22	29495023	29495023	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KREMEN1	83999	broad.mit.edu	37	22	29495023	29495023	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT15	3866	broad.mit.edu	37	17	39671965	39671965	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT15	3866	broad.mit.edu	37	17	39671965	39671965	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT32	3882	broad.mit.edu	37	17	39620561	39620561	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT32	3882	broad.mit.edu	37	17	39620561	39620561	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53189527	53189527	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT3	3850	broad.mit.edu	37	12	53189527	53189527	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT75	9119	broad.mit.edu	37	12	52827568	52827568	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT83	3889	broad.mit.edu	37	12	52710520	52710520	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT83	3889	broad.mit.edu	37	12	52710520	52710520	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52754854	52754854	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52761049	52761049	+	Silent	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52761049	52761049	+	Silent	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-8	57830	broad.mit.edu	37	11	71249503	71249532	+	In_Frame_Del	DEL	CCAGTCCAGCTGCTGCAAGCCCTGCTGTTC	-	-	rs11234084		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6973046	6973046	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6973046	6973046	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112476952	112476952	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112476952	112476952	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203743633	203743633	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203743633	203743633	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHB	3945	broad.mit.edu	37	12	21788434	21788434	+	3'UTR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHB	3945	broad.mit.edu	37	12	21788434	21788434	+	3'UTR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36057608	36057608	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36057608	36057608	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD1	93273	broad.mit.edu	37	1	205388589	205388589	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD1	93273	broad.mit.edu	37	1	205388589	205388589	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104309110	104309110	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL3	375612	broad.mit.edu	37	7	104309110	104309110	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA6	79168	broad.mit.edu	37	19	54742922	54742922	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA6	79168	broad.mit.edu	37	19	54742922	54742922	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55143266	55143266	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54778428	54778428	+	3'UTR	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148016411	148016411	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148016411	148016411	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC374491	374491	broad.mit.edu	37	13	25144805	25144805	+	RNA	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC374491	374491	broad.mit.edu	37	13	25144805	25144805	+	RNA	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132201518	132201518	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC401010	401010	broad.mit.edu	37	2	132201518	132201518	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643955	643955	broad.mit.edu	37	7	62758869	62758869	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91843332	91843332	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT3	10162	broad.mit.edu	37	12	7092727	7092727	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT3	10162	broad.mit.edu	37	12	7092727	7092727	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK1	79705	broad.mit.edu	37	15	101606191	101606191	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33614513	33614513	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33614513	33614513	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151899874	151899874	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151899874	151899874	+	Silent	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB3	4114	broad.mit.edu	37	X	30254445	30254445	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB3	4114	broad.mit.edu	37	X	30254445	30254445	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54841728	54841728	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54841728	54841728	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65673843	65673843	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K7	6885	broad.mit.edu	37	6	91269678	91269678	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K7	6885	broad.mit.edu	37	6	91269678	91269678	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D3	79649	broad.mit.edu	37	X	135318499	135318499	+	Splice_Site	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAP1	79109	broad.mit.edu	37	9	128358883	128358883	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAP1	79109	broad.mit.edu	37	9	128358883	128358883	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119727780	119727780	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119727780	119727780	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12951309	12951309	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12976793	12976793	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119185142	119185142	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119185142	119185142	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47699995	47699995	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47699995	47699995	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47670272	47670272	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47670272	47670272	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM4	4194	broad.mit.edu	37	1	204513588	204513588	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM4	4194	broad.mit.edu	37	1	204513588	204513588	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70360680	70360682	+	In_Frame_Del	DEL	GCA	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED24	9862	broad.mit.edu	37	17	38192396	38192396	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED24	9862	broad.mit.edu	37	17	38192396	38192396	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED25	81857	broad.mit.edu	37	19	50331754	50331754	+	Silent	SNP	C	T	T	rs145574885	byFrequency	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2D	4209	broad.mit.edu	37	1	156452198	156452198	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129904904	129904904	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129904904	129904904	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151962197	151962197	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSPD2	158747	broad.mit.edu	37	X	14915127	14915127	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP2	4355	broad.mit.edu	37	17	41954991	41954991	+	3'UTR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP3	4356	broad.mit.edu	37	17	41898571	41898571	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRM1	79922	broad.mit.edu	37	17	34963890	34963890	+	Intron	DEL	A	-	-	rs35964238		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST4	51765	broad.mit.edu	37	X	131205316	131205316	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST4	51765	broad.mit.edu	37	X	131205316	131205316	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1A	4489	broad.mit.edu	37	16	56673680	56673680	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1A	4489	broad.mit.edu	37	16	56673680	56673680	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA3	57504	broad.mit.edu	37	2	42760223	42760223	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9739689	9739689	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63574871	63574871	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63574871	63574871	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237052487	237052487	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237052487	237052487	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1	9788	broad.mit.edu	37	8	125577892	125577892	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1	9788	broad.mit.edu	37	8	125577892	125577892	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9021116	9021116	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9071071	9071071	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9071071	9071071	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100681561	100681561	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100682066	100682066	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100681561	100681561	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1081893	1081893	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10411593	10411594	+	Intron	DNP	CC	GA	GA			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23887584	23887584	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23887584	23887584	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123454272	123454273	+	Intron	INS	-	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16681288	16681289	+	Intron	INS	-	AT	AT	rs139510797	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171257993	171257993	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171257993	171257993	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69882001	69882001	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69882001	69882001	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA15	80155	broad.mit.edu	37	4	140265265	140265265	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA15	80155	broad.mit.edu	37	4	140265265	140265265	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPA	8775	broad.mit.edu	37	19	48017995	48017995	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19955796	19955796	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19955796	19955796	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144168520	144168520	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113102363	113102363	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113102363	113102363	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6626865	6626865	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6626865	6626865	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54925554	54925554	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54925554	54925554	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA5	4698	broad.mit.edu	37	7	123197914	123197914	+	5'UTR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA5	4698	broad.mit.edu	37	7	123197914	123197914	+	5'UTR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152467394	152467394	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152467394	152467394	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72740663	72740663	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72740663	72740663	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52794870	52794870	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52794870	52794870	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEU3	10825	broad.mit.edu	37	11	74716538	74716538	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEU3	10825	broad.mit.edu	37	11	74716538	74716538	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29679225	29679225	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204954991	204954991	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50092041	50092041	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50092041	50092041	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85414499	85414499	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5811180	5811180	+	Missense_Mutation	SNP	C	G	G	rs4017999		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5811180	5811180	+	Missense_Mutation	SNP	C	G	G	rs4017999		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821138	5821138	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65077169	65077169	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65077169	65077169	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57104587	57104587	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57104587	57104587	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56443508	56443508	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP13	126204	broad.mit.edu	37	19	56443508	56443508	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMI	9111	broad.mit.edu	37	2	152138400	152138400	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL11	25926	broad.mit.edu	37	17	65715741	65715741	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL11	25926	broad.mit.edu	37	17	65715741	65715741	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOLC1	9221	broad.mit.edu	37	10	103917833	103917833	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOLC1	9221	broad.mit.edu	37	10	103917833	103917833	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26084526	26084527	+	Intron	DNP	CC	AA	AA			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30327006	30327006	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30327006	30327006	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105132286	105132286	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105189911	105189911	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105132286	105132286	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105189911	105189911	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	80130075	80130075	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	80130077	80130077	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	80130075	80130075	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	80130077	80130077	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152027212	152027212	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152027212	152027212	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE4A	54780	broad.mit.edu	37	10	123719174	123719174	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE4A	54780	broad.mit.edu	37	10	123719174	123719174	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156845459	156845459	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156845459	156845459	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150057694	150057694	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150057694	150057694	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP88	4927	broad.mit.edu	37	17	5319973	5319973	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101572217	101572217	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101572217	101572217	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101096791	101096791	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101096791	101096791	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228492264	228492264	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228548231	228548231	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228492264	228492264	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28326973	28326973	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167489067	167489067	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50946023	50946023	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50946023	50946023	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161976113	161976113	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161976113	161976113	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47775990	47775990	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47775990	47775990	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62729409	62729409	+	Missense_Mutation	SNP	C	A	A	rs148381492		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62729409	62729409	+	Missense_Mutation	SNP	C	A	A	rs148381492		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A4	283297	broad.mit.edu	37	11	6898596	6898596	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A4	283297	broad.mit.edu	37	11	6898596	6898596	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H4	126541	broad.mit.edu	37	19	16060247	16060247	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H4	126541	broad.mit.edu	37	19	16060247	16060247	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978341	247978341	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978341	247978341	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845133	248845133	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14I1	401994	broad.mit.edu	37	1	248845133	248845133	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248167034	248167034	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185701	248185701	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248167034	248167034	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185701	248185701	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263679	248263679	+	3'UTR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248757058	248757058	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248757058	248757058	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T2	401992	broad.mit.edu	37	1	248616138	248616139	+	Missense_Mutation	DNP	GT	AG	AG			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T2	401992	broad.mit.edu	37	1	248616138	248616139	+	Missense_Mutation	DNP	GT	AG	AG			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059153	248059153	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059153	248059153	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A5	81318	broad.mit.edu	37	11	51412419	51412419	+	5'Flank	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A5	81318	broad.mit.edu	37	11	51412419	51412419	+	5'Flank	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55433035	55433035	+	Silent	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C6	219432	broad.mit.edu	37	11	55433035	55433035	+	Silent	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20443793	20443793	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20443793	20443793	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G1	79324	broad.mit.edu	37	11	4944698	4944698	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5411400	5411400	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221796	5221796	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A1	23538	broad.mit.edu	37	11	5173255	5173255	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A1	23538	broad.mit.edu	37	11	5173255	5173255	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A1	120796	broad.mit.edu	37	11	6048560	6048560	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A1	120796	broad.mit.edu	37	11	6048560	6048560	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55562907	55562907	+	5'Flank	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H14	403273	broad.mit.edu	37	3	97868644	97868644	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000141	56000141	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000141	56000141	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5V1	81696	broad.mit.edu	37	6	29323725	29323725	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL11	114885	broad.mit.edu	37	3	125313780	125313780	+	5'UTR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD6A	139562	broad.mit.edu	37	X	69282756	69282756	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149915924	149915924	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149915924	149915924	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP11	57097	broad.mit.edu	37	12	3948721	3948721	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP11	57097	broad.mit.edu	37	12	3948721	3948721	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226580692	226580692	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226580692	226580692	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44586474	44586474	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44586474	44586474	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52584605	52584605	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134111444	134111444	+	3'UTR	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH19	57526	broad.mit.edu	37	X	99551355	99551355	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140719811	140719811	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140719811	140719811	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82764395	82764395	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82764395	82764395	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78506292	78506292	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78506292	78506292	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31864557	31864558	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31864558	31864558	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144855788	144855788	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144855788	144855788	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55129867	55129867	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54794317	54794317	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55129867	55129867	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32048735	32048735	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32048735	32048735	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73437350	73437350	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECI	10455	broad.mit.edu	37	6	4116324	4116324	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECI	10455	broad.mit.edu	37	6	4116324	4116324	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179525380	179525380	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179525380	179525380	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF3	23469	broad.mit.edu	37	6	64394679	64394679	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF6	84295	broad.mit.edu	37	X	133559478	133559478	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44426479	44426479	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145585532	145585533	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81187704	81187704	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81187704	81187704	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45568239	45568239	+	5'UTR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHO1	51177	broad.mit.edu	37	1	150129498	150129498	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN3	10226	broad.mit.edu	37	19	4859660	4859660	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLVAP	83483	broad.mit.edu	37	19	17488189	17488189	+	5'Flank	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA3	55558	broad.mit.edu	37	X	153691506	153691506	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMPCB	9512	broad.mit.edu	37	7	102937953	102937953	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMPCB	9512	broad.mit.edu	37	7	102937953	102937953	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118357646	118357646	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118357646	118357646	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNP	4860	broad.mit.edu	37	14	20940346	20940346	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNP	4860	broad.mit.edu	37	14	20940346	20940346	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POF1B	79983	broad.mit.edu	37	X	84606465	84606465	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133256576	133256576	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133256576	133256576	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7656626	7656626	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7656626	7656626	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102508881	102508881	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102508881	102508881	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R8	5511	broad.mit.edu	37	1	28169913	28169913	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5B	5526	broad.mit.edu	37	11	64695897	64695897	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5B	5526	broad.mit.edu	37	11	64695897	64695897	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM1	639	broad.mit.edu	37	6	106553068	106553069	+	Frame_Shift_Ins	INS	-	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM1	639	broad.mit.edu	37	6	106553068	106553069	+	Frame_Shift_Ins	INS	-	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE2	166336	broad.mit.edu	37	3	64133210	64133210	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE2	166336	broad.mit.edu	37	3	64133210	64133210	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE3	4007	broad.mit.edu	37	X	49032419	49032419	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAA1	5562	broad.mit.edu	37	5	40798230	40798230	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAA1	5562	broad.mit.edu	37	5	40798230	40798230	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46378420	46378423	+	Intron	DEL	ACAC	-	-	rs72199610		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50026780	50026780	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR21	643905	broad.mit.edu	37	2	240982117	240982144	+	Frame_Shift_Del	DEL	GTGGGTGAAGAGGCATGGATGAAGGACT	-	-	rs147066740	byFrequency;by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS23	11098	broad.mit.edu	37	11	86544396	86544396	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS23	11098	broad.mit.edu	37	11	86544396	86544396	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS3	5646	broad.mit.edu	37	9	33798729	33798729	+	Intron	DEL	T	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43519798	43519798	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43519798	43519798	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43359723	43359724	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43359723	43359724	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20279867	20279867	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20279867	20279867	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55716908	55716908	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55716908	55716908	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157931355	157931355	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40739175	40739175	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40739175	40739175	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPRT	23475	broad.mit.edu	37	16	29708623	29708623	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPRT	23475	broad.mit.edu	37	16	29708623	29708623	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220345428	220345428	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220345428	220345428	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB8A	4218	broad.mit.edu	37	19	16232695	16232695	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABAC1	10567	broad.mit.edu	37	19	42461330	42461330	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAC1	5879	broad.mit.edu	37	7	6441399	6441399	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAC1	5879	broad.mit.edu	37	7	6441399	6441399	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP2	729475	broad.mit.edu	37	2	17698743	17698743	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37126007	37126007	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37126007	37126007	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2703722	2703743	+	Intron	DEL	GGCTGTCCCGGGGACTCCTCCA	-	-	rs72122107		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA2	5922	broad.mit.edu	37	3	141259374	141259374	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA2	5922	broad.mit.edu	37	3	141259374	141259374	+	Splice_Site	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM10	8241	broad.mit.edu	37	X	47041662	47041663	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8505745	8505745	+	Intron	DEL	T	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183853736	183853736	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73178273	73178273	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156347121	156347121	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEBL1	121268	broad.mit.edu	37	12	49463563	49463563	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEBL1	121268	broad.mit.edu	37	12	49463563	49463563	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104709469	104709469	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104709469	104709469	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96506952	96506952	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96506952	96506952	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	86997154	86997154	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	86997154	86997154	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE4	6038	broad.mit.edu	37	14	21167998	21167998	+	3'UTR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF122	79845	broad.mit.edu	37	8	33406783	33406783	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38145111	38145111	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38145111	38145111	+	Silent	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS10	6204	broad.mit.edu	37	6	34385331	34385331	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS10	6204	broad.mit.edu	37	6	34385331	34385331	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA5	9252	broad.mit.edu	37	14	91467520	91467521	+	Intron	DEL	GG	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS9	6203	broad.mit.edu	37	19	54705255	54705255	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237890503	237890503	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237890503	237890503	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237947310	237947310	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134994943	134994943	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134994943	134994943	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD3	154075	broad.mit.edu	37	6	130505350	130505350	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD3	154075	broad.mit.edu	37	6	130505350	130505350	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68331951	68331952	+	Intron	INS	-	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS3	55291	broad.mit.edu	37	11	68331951	68331952	+	Intron	INS	-	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38830357	38830357	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNM1	79005	broad.mit.edu	37	1	151140046	151140046	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE1	80274	broad.mit.edu	37	22	43658571	43658571	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119659495	119659495	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119659495	119659495	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92065386	92065386	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92065386	92065386	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT6	23157	broad.mit.edu	37	X	118763133	118763133	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERP2	387923	broad.mit.edu	37	13	44971453	44971453	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERP2	387923	broad.mit.edu	37	13	44971453	44971453	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100780223	100780223	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD8	387893	broad.mit.edu	37	12	123875097	123875097	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD8	387893	broad.mit.edu	37	12	123875097	123875097	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19136190	19136190	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS8	6433	broad.mit.edu	37	12	132250564	132250564	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	155885571	155885571	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	155885571	155885571	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2834799	2834799	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2834799	2834799	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105361828	105361828	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105361828	105361828	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149131	52149131	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149131	52149131	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3684492	3684492	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3684492	3684492	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72117374	72117374	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1053370	1053370	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1075438	1075438	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A1	6573	broad.mit.edu	37	21	46935678	46935678	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63078458	63078458	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63078458	63078458	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A9	114571	broad.mit.edu	37	11	63149534	63149534	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A9	114571	broad.mit.edu	37	11	63149534	63149534	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A14	9016	broad.mit.edu	37	X	129484598	129484598	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A14	9016	broad.mit.edu	37	X	129484598	129484598	+	Intron	DEL	C	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A21	89874	broad.mit.edu	37	14	37198875	37198875	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A3	5250	broad.mit.edu	37	12	98989171	98989171	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A3	5250	broad.mit.edu	37	12	98989171	98989171	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A3	11000	broad.mit.edu	37	1	153750884	153750884	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A3	11000	broad.mit.edu	37	1	153750884	153750884	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A8	29988	broad.mit.edu	37	9	130169336	130169336	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A9	10463	broad.mit.edu	37	4	42003698	42003698	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A9	10463	broad.mit.edu	37	4	42003698	42003698	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118598587	118598587	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A1	206358	broad.mit.edu	37	5	150844519	150844519	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47172034	47172034	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47172034	47172034	+	Intron	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18250886	18250886	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC47A2	146802	broad.mit.edu	37	17	19618558	19618558	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108604526	108604526	+	Intron	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A11	23657	broad.mit.edu	37	4	139100436	139100436	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A11	23657	broad.mit.edu	37	4	139100436	139100436	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A1	6548	broad.mit.edu	37	1	27428248	27428248	+	Silent	SNP	G	T	T	rs137936112		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168098448	168098448	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168098448	168098448	+	Silent	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18823123	18823123	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18823123	18823123	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70352712	70352713	+	Intron	INS	-	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25339151	25339151	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25339151	25339151	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX30	11063	broad.mit.edu	37	5	157053465	157053465	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR2D	6703	broad.mit.edu	37	1	153012823	153012823	+	5'UTR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR2D	6703	broad.mit.edu	37	1	153012823	153012823	+	5'UTR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596702	158596702	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158613037	158613037	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158618526	158618526	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158622310	158622310	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158596702	158596702	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158613037	158613037	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158618526	158618526	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158622310	158622310	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQLE	6713	broad.mit.edu	37	8	126011616	126011616	+	5'UTR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQLE	6713	broad.mit.edu	37	8	126011616	126011616	+	5'UTR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45806916	45806916	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45806916	45806916	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99912016	99912016	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR4	6754	broad.mit.edu	37	20	23016506	23016506	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR4	6754	broad.mit.edu	37	20	23016506	23016506	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136141124	136141124	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136196323	136196324	+	Intron	DNP	CA	AT	AT			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136196323	136196324	+	Intron	DNP	CA	AT	AT			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD8	9754	broad.mit.edu	37	X	67943666	67943666	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32A	202374	broad.mit.edu	37	5	146730870	146730870	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA8	346673	broad.mit.edu	37	7	134929866	134929866	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37095164	37095164	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4458978	4458978	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4458978	4458978	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C4	27233	broad.mit.edu	37	2	108994680	108994680	+	5'UTR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C4	27233	broad.mit.edu	37	2	108994680	108994680	+	5'UTR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN1	6853	broad.mit.edu	37	X	47432471	47432471	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64484334	64484336	+	In_Frame_Del	DEL	TAC	-	-	rs143578863	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64484334	64484336	+	In_Frame_Del	DEL	TAC	-	-	rs143578863	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120773109	120773109	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120773109	120773109	+	Intron	SNP	T	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT1	83659	broad.mit.edu	37	17	6704148	6704149	+	Missense_Mutation	DNP	GG	CT	CT	rs150562113		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT1	83659	broad.mit.edu	37	17	6704148	6704148	+	Missense_Mutation	SNP	G	C	C	rs150562113		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50811154	50811154	+	3'UTR	SNP	A	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169623382	169623382	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122747707	122747707	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC5	8563	broad.mit.edu	37	22	29915164	29915164	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC5	8563	broad.mit.edu	37	22	29915164	29915164	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32559434	32559434	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32559434	32559434	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIFAB	497189	broad.mit.edu	37	5	134785501	134785501	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIFAB	497189	broad.mit.edu	37	5	134785501	134785501	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153555597	153555597	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153555597	153555597	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98146807	98146807	+	Missense_Mutation	SNP	G	T	T	rs144026118		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98146807	98146807	+	Missense_Mutation	SNP	G	T	T	rs144026118		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR6	10333	broad.mit.edu	37	4	38831004	38831004	+	Nonsense_Mutation	SNP	C	A	A	rs138225547		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR6	10333	broad.mit.edu	37	4	38831004	38831004	+	Nonsense_Mutation	SNP	C	A	A	rs138225547		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR7	51284	broad.mit.edu	37	X	12905653	12905653	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81660847	81660847	+	Intron	DEL	A	-	-	rs71451582		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC3	57458	broad.mit.edu	37	12	94984965	94984965	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44781901	44781901	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44781901	44781901	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM130	222865	broad.mit.edu	37	7	98449098	98449098	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM130	222865	broad.mit.edu	37	7	98449098	98449098	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15601381	15601381	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15601381	15601381	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM27	57393	broad.mit.edu	37	X	15662940	15662940	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM27	57393	broad.mit.edu	37	X	15670616	15670616	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM67	91147	broad.mit.edu	37	8	94776060	94776060	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM67	91147	broad.mit.edu	37	8	94776060	94776060	+	Intron	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS12	283471	broad.mit.edu	37	12	51279140	51279140	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS12	283471	broad.mit.edu	37	12	51279140	51279140	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF9	8744	broad.mit.edu	37	19	6535039	6535039	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76060929	76060929	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76060929	76060929	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175331945	175331945	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175331945	175331945	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47436557	47436557	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1	10043	broad.mit.edu	37	22	35726272	35726272	+	Intron	DEL	A	-	-	rs79603137		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578469	7578469	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578469	7578469	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L3	89882	broad.mit.edu	37	9	6329037	6329037	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L3	89882	broad.mit.edu	37	9	6329037	6329037	+	3'UTR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10910395	10910395	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10910395	10910395	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	914836	914837	+	Intron	DEL	GT	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2429206	2429206	+	Intron	DEL	T	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP3	7289	broad.mit.edu	37	12	3042678	3042678	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48112481	48112481	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA3	9039	broad.mit.edu	37	3	69111369	69111369	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA3	9039	broad.mit.edu	37	3	69111369	69111369	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43826503	43826503	+	Intron	SNP	G	A	A	rs150478172	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43826503	43826503	+	Intron	SNP	G	A	A	rs150478172	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2CBP	90025	broad.mit.edu	37	6	83763711	83763711	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10093697	10093697	+	5'UTR	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10093697	10093697	+	5'UTR	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138977896	138977896	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138977896	138977896	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN4	56893	broad.mit.edu	37	1	156012101	156012101	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19437397	19437397	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19437397	19437397	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69520985	69520985	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69520985	69520985	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNK	85451	broad.mit.edu	37	17	73813013	73813013	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP11	8237	broad.mit.edu	37	X	47107098	47107098	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5036434	5036434	+	Intron	SNP	G	T	T	rs116734986	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5036453	5036453	+	Intron	SNP	T	C	C	rs116916533	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129044833	129044833	+	Intron	DEL	G	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129044833	129044833	+	Intron	DEL	G	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	13200224	13200224	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	67007876	67007876	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48239329	48239329	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48973182	48973182	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49053879	49053879	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49055902	49055902	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49897934	49897934	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55782955	55782955	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30607916	30607916	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86928581	86928581	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20678035	20678035	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20996185	20996185	+	IGR	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	78233844	78233844	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97094687	97094687	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32447421	32447421	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33371681	33371681	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33408308	33408308	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34481713	34481713	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34660551	34660551	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34724331	34724331	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34727155	34727155	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	59788415	59788415	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	42000429	42000429	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14378576	14378576	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	24412307	24412307	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22697454	22697454	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	29282478	29282478	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157609731	157609731	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175014271	175014271	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	31128099	31128099	+	IGR	SNP	A	G	G	rs77486301	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79521177	79521177	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	4610474	4610474	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24474966	24474966	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40250867	40250867	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17338949	17338949	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105387842	105387842	+	IGR	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131024419	131024419	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194142381	194142382	+	IGR	DNP	AC	TT	TT			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195052686	195052686	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	17913316	17913316	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11373719	11373719	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	146377962	146377962	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165864389	165864389	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	49121629	49121629	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	49145995	49145995	+	IGR	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63355846	63355846	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	66959878	66959878	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70212379	70212379	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105752451	105752451	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80777123	80777123	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10516502	10516502	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27497780	27497780	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55003597	55003597	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57072110	57072110	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134338539	134338539	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92922086	92922086	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44093199	44093199	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477829	7477829	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118207257	118207257	+	IGR	SNP	G	C	C	rs147373289	by1000genomes	TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134814877	134814877	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137571071	137571071	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141260978	141260978	+	IGR	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40750243	40750243	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48300140	48300140	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	56231442	56231442	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63918267	63918267	+	IGR	DEL	C	-	-			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79827536	79827536	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111294828	111294828	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38990477	38990477	+	IGR	SNP	G	T	T	rs4495824		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	67007876	67007876	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	129166288	129166288	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48239329	48239329	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48973182	48973182	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49055902	49055902	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49854947	49854947	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49897934	49897934	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55156054	55156054	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55782955	55782955	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	7805557	7805557	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	126166680	126166680	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	30607916	30607916	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	60610198	60610199	+	IGR	DNP	CA	AG	AG			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20336880	20336880	+	IGR	SNP	A	G	G	rs145761753	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20678035	20678035	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20996185	20996185	+	IGR	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	100091774	100091774	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	97094687	97094687	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	10934469	10934469	+	IGR	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32447421	32447421	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33371681	33371681	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33391450	33391450	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33414013	33414013	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34481713	34481713	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34660551	34660551	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34724331	34724331	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34727155	34727155	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34877131	34877131	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	59788415	59788415	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	42000429	42000429	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	24412307	24412307	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22646678	22646678	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	29282478	29282478	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157609731	157609731	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175014271	175014271	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187601584	187601584	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209406038	209406038	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	246676253	246676253	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	4610474	4610474	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24474966	24474966	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40250867	40250867	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17338949	17338949	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105387842	105387842	+	IGR	DEL	C	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	119300234	119300234	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131024419	131024419	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	164009115	164009115	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194142381	194142382	+	IGR	DNP	AC	TT	TT			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195052686	195052686	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109635382	109635382	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	16735688	16735688	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	17913316	17913316	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11373719	11373719	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	117115404	117115404	+	IGR	SNP	A	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	146377962	146377962	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	163245010	163245010	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165864389	165864389	+	IGR	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63355846	63355846	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	66959878	66959878	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70212379	70212379	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	105752451	105752451	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	12214156	12214156	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	157117267	157117267	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	5375955	5375955	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	159745070	159745070	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80777123	80777123	+	IGR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	15025540	15025540	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27497780	27497780	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53070352	53070353	+	IGR	DNP	AG	GC	GC			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55003597	55003597	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134338539	134338539	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92922086	92922086	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44154072	44154073	+	IGR	INS	-	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513089	66513089	+	IGR	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477829	7477829	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	118207257	118207257	+	IGR	SNP	G	C	C	rs147373289	by1000genomes	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134814877	134814877	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137571071	137571072	+	IGR	DNP	GA	TT	TT			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141260978	141260978	+	IGR	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	39254831	39254831	+	IGR	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40750243	40750243	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48300140	48300140	+	IGR	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	56231442	56231442	+	IGR	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	63918267	63918267	+	IGR	DEL	C	-	-			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79827536	79827536	+	IGR	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6825306	6825306	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6825306	6825306	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR45L	56270	broad.mit.edu	37	17	80584989	80584989	+	Intron	SNP	A	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122380653	122380653	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37701031	37701031	+	Intron	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRAP53	55135	broad.mit.edu	37	17	7592605	7592605	+	Silent	SNP	C	T	T	rs147817526		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRAP53	55135	broad.mit.edu	37	17	7592605	7592605	+	Silent	SNP	C	T	T	rs147817526		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2712567	2712567	+	Intron	SNP	G	A	A	rs56070101		TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2712567	2712567	+	Intron	SNP	G	A	A	rs56070101		TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168096520	168096520	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168096520	168096520	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168110398	168110398	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100461539	100461539	+	5'Flank	SNP	C	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100461539	100461539	+	5'Flank	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43523798	43523798	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43523798	43523798	+	Intron	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128957764	128957764	+	Silent	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72038818	72038818	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72038818	72038818	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50769075	50769076	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE28	57732	broad.mit.edu	37	4	2274775	2274775	+	Intron	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81049602	81049602	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22154060	22154060	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22154060	22154060	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF256	10172	broad.mit.edu	37	19	58452538	58452538	+	Silent	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF331	55422	broad.mit.edu	37	19	54080061	54080061	+	Missense_Mutation	SNP	T	C	C	rs146144933	byFrequency	TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21465633	21465633	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21552223	21552223	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21552223	21552223	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31165982	31165982	+	5'UTR	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188147	57188147	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57199980	57199980	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188147	57188147	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57199980	57199980	+	Intron	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF502	91392	broad.mit.edu	37	3	44751848	44751848	+	5'Flank	SNP	C	G	G			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF502	91392	broad.mit.edu	37	3	44751848	44751848	+	5'Flank	SNP	C	G	G			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	60069	60069	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF611	81856	broad.mit.edu	37	19	53208559	53208559	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23938434	23938434	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57510079	57510079	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57510079	57510079	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	31001512	31001512	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29323883	29323883	+	Intron	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	107207	107207	+	5'Flank	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17385568	17385568	+	5'Flank	SNP	G	A	A			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96568701	96568701	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01D-0969-08	TCGA-67-3770-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	19856611	19856611	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	31001512	31001512	+	Silent	SNP	C	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43189977	43189977	+	5'Flank	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	24736561	24736562	+	RNA	INS	-	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332094	20332094	+	RNA	SNP	C	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159336882	159336882	+	Intron	SNP	G	T	T			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17385568	17385568	+	5'Flank	SNP	G	A	A			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96568701	96568701	+	Intron	SNP	T	C	C			TCGA-67-3770-01A-01W-0928-08	TCGA-67-3770-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
