Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	7760773	7760773	+	3'UTR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7760773	7760773	+	3'UTR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215840444	215840444	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215840444	215840444	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48443531	48443531	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94544950	94544950	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94564460	94564460	+	Missense_Mutation	SNP	G	A	A	rs61748538		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94505588	94505588	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94544950	94544950	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94564460	94564460	+	Missense_Mutation	SNP	G	A	A	rs61748538		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA5	23461	broad.mit.edu	37	17	67290918	67290918	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67012515	67012515	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20721101	20721101	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB8	11194	broad.mit.edu	37	7	150739143	150739143	+	Silent	SNP	G	T	T	rs138648802	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16235220	16235220	+	3'UTR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC3	8714	broad.mit.edu	37	17	48761448	48761448	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC3	8714	broad.mit.edu	37	17	48761448	48761448	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95696734	95696734	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95862948	95862948	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183696484	183696484	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183696484	183696484	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17482025	17482025	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17482025	17482025	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21981911	21981911	+	Missense_Mutation	SNP	C	G	G	rs12298510		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22068796	22068796	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21981911	21981911	+	Missense_Mutation	SNP	C	G	G	rs12298510		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22068796	22068796	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43621828	43621828	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43621828	43621828	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89034361	89034361	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD2	11057	broad.mit.edu	37	15	89695002	89695002	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD6	57406	broad.mit.edu	37	3	58279173	58279173	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179077723	179077723	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179077723	179077723	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM2	84448	broad.mit.edu	37	4	7994683	7994683	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADL	33	broad.mit.edu	37	2	211085209	211085209	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADM	34	broad.mit.edu	37	1	76216217	76216217	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACADM	34	broad.mit.edu	37	1	76216217	76216217	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD3	64746	broad.mit.edu	37	1	226340111	226340111	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31341136	31341136	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220397707	220397707	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN4	55515	broad.mit.edu	37	2	220397707	220397707	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACMSD	130013	broad.mit.edu	37	2	135602964	135602964	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACO1	48	broad.mit.edu	37	9	32408673	32408673	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACO1	48	broad.mit.edu	37	9	32408673	32408673	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACO2	50	broad.mit.edu	37	22	41916031	41916031	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT7	11332	broad.mit.edu	37	1	6453348	6453348	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX3	8310	broad.mit.edu	37	4	8418229	8418229	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP5	54	broad.mit.edu	37	19	11687567	11687568	+	Missense_Mutation	DNP	GA	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSBG1	23205	broad.mit.edu	37	15	78500311	78500311	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20486733	20486733	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20488174	20488174	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20442243	20442243	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20442243	20442243	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33462855	33462855	+	5'Flank	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81528641	81528641	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6B	51412	broad.mit.edu	37	7	100244460	100244460	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6B	51412	broad.mit.edu	37	7	100244460	100244460	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236918345	236918345	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236912414	236912414	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236918345	236918345	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114697528	114697528	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114697528	114697528	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR8	93973	broad.mit.edu	37	3	53908248	53908248	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM10	102	broad.mit.edu	37	15	58957351	58957351	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127782626	127782626	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM17	6868	broad.mit.edu	37	2	9633917	9633917	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM29	11086	broad.mit.edu	37	4	175898412	175898412	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208980	106208980	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106321585	106321585	+	RNA	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107035128	107035128	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208980	106208980	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106321585	106321585	+	RNA	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106919553	106919553	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107022326	107022326	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107035128	107035128	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24359024	24359024	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24359024	24359024	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33527444	33527444	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33527444	33527444	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33588901	33588901	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72520070	72520070	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72520070	72520070	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5303476	5303476	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5242152	5242152	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100695332	100695332	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100695332	100695332	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100802561	100802561	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43824099	43824099	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43824099	43824099	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84442202	84442202	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84442202	84442202	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK4	79934	broad.mit.edu	37	19	41215893	41215893	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK4	79934	broad.mit.edu	37	19	41215893	41215893	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167830153	167830153	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45743322	45743322	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123016354	123016354	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123015089	123015089	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131812783	131812783	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131955633	131955633	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD3	120	broad.mit.edu	37	10	111879159	111879159	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD3	120	broad.mit.edu	37	10	111879159	111879159	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1B	125	broad.mit.edu	37	4	100240138	100240138	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1B	125	broad.mit.edu	37	4	100240138	100240138	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP2	22850	broad.mit.edu	37	18	77894747	77894747	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA3	140	broad.mit.edu	37	1	112031646	112031646	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADORA3	140	broad.mit.edu	37	1	112031646	112031646	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2A	150	broad.mit.edu	37	10	112838147	112838147	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2A	150	broad.mit.edu	37	10	112838147	112838147	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2B	151	broad.mit.edu	37	2	96780506	96780506	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRB3	155	broad.mit.edu	37	8	37821747	37821747	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK2	157	broad.mit.edu	37	22	26043307	26043307	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44149840	44149840	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP1	165	broad.mit.edu	37	7	44149840	44149840	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF1	4299	broad.mit.edu	37	4	88047194	88047194	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148054827	148054827	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	148054827	148054827	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFTPH	54812	broad.mit.edu	37	2	64780561	64780561	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	49511413	49511413	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50311637	50311637	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L2	85007	broad.mit.edu	37	5	177636519	177636519	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247065962	247065962	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247076763	247076763	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL1	10768	broad.mit.edu	37	1	110551679	110551679	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL1	10768	broad.mit.edu	37	1	110551679	110551679	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135811302	135811302	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105408231	105408231	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105416868	105416868	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105419147	105419147	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105408231	105408231	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105416868	105416868	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105419147	105419147	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62294197	62294197	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62294197	62294197	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHR	196	broad.mit.edu	37	7	17378614	17378614	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHSG	197	broad.mit.edu	37	3	186333643	186333643	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHSG	197	broad.mit.edu	37	3	186333643	186333643	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIG1	51390	broad.mit.edu	37	6	143654305	143654305	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIG1	51390	broad.mit.edu	37	6	143654305	143654305	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106968728	106968728	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM2	9447	broad.mit.edu	37	1	159032614	159032614	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP11	11215	broad.mit.edu	37	13	42871181	42871181	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP3	10566	broad.mit.edu	37	12	4747357	4747357	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP3	10566	broad.mit.edu	37	12	4747357	4747357	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101425404	101425404	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101425404	101425404	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110970597	110970597	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3726108	3726108	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALLC	55821	broad.mit.edu	37	2	3726108	3726108	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233244133	233244133	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202206971	202206971	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202207129	202207129	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202206971	202206971	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202207129	202207129	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202633663	202633663	+	5'UTR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202606351	202606351	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202633663	202633663	+	5'UTR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46534226	46534226	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46534226	46534226	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38424385	38424385	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38424385	38424385	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMTN	401138	broad.mit.edu	37	4	71398274	71398274	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMTN	401138	broad.mit.edu	37	4	71398274	71398274	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104120405	104120405	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104114738	104114738	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104120405	104120405	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT1	284	broad.mit.edu	37	8	108315484	108315484	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL6	83854	broad.mit.edu	37	19	10205580	10205580	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41572403	41572403	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41572403	41572403	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41581037	41581037	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114209648	114209648	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114282130	114282130	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114209648	114209648	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	broad.mit.edu	37	5	139909060	139909060	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	broad.mit.edu	37	5	139909060	139909060	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241439489	241439489	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241439489	241439489	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73962875	73962875	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73979740	73979740	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73962875	73962875	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD29	147463	broad.mit.edu	37	18	21214028	21214028	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD29	147463	broad.mit.edu	37	18	21214028	21214028	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37434054	37434054	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14763799	14763799	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14763799	14763799	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14851684	14851684	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34B	340120	broad.mit.edu	37	5	79855043	79855043	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	198051794	198051794	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	198051794	198051794	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD52	283373	broad.mit.edu	37	12	56647906	56647906	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD55	79722	broad.mit.edu	37	5	55396242	55396242	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD55	79722	broad.mit.edu	37	5	55407437	55407437	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKZF1	55139	broad.mit.edu	37	2	220097894	220097894	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKZF1	55139	broad.mit.edu	37	2	220097894	220097894	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	6055288	6055288	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	6055288	6055288	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22248914	22248914	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22248914	22248914	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118606	165118606	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118606	165118606	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90346962	90346962	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90346962	90346962	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69350007	69350007	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69297879	69297879	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201470223	201470223	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29745135	29745135	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29745135	29745135	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83332601	83332601	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83332601	83332601	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3D1	8943	broad.mit.edu	37	19	2121257	2121257	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99053214	99053214	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99096994	99096994	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99042288	99042288	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99053214	99053214	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29368186	29368186	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA2	321	broad.mit.edu	37	15	29368186	29368186	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APEH	327	broad.mit.edu	37	3	49716255	49716255	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APEH	327	broad.mit.edu	37	3	49716255	49716255	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APEH	327	broad.mit.edu	37	3	49720763	49720763	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP1	333	broad.mit.edu	37	19	36369786	36369786	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP1	333	broad.mit.edu	37	19	36369786	36369786	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP2	334	broad.mit.edu	37	11	129996686	129996686	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP2	334	broad.mit.edu	37	11	129996686	129996686	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA1BP	128240	broad.mit.edu	37	1	156562641	156562642	+	Intron	INS	-	CA	CA	rs148811958	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116691596	116691596	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116693506	116693506	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA5	116519	broad.mit.edu	37	11	116661394	116661394	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227066	21227066	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234952	21234952	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21235014	21235014	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227066	21227066	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234952	21234952	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21235014	21235014	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOC3	345	broad.mit.edu	37	11	116701675	116701675	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115298888	115298888	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115298888	115298888	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP1	116985	broad.mit.edu	37	11	72410007	72410007	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP1	116985	broad.mit.edu	37	11	72410007	72410007	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36160521	36160521	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP3	64411	broad.mit.edu	37	5	141059053	141059053	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP1	27236	broad.mit.edu	37	4	153793573	153793573	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP12	94134	broad.mit.edu	37	10	32103262	32103262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP12	94134	broad.mit.edu	37	10	32103262	32103262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6882203	6882203	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF1	9138	broad.mit.edu	37	19	42407924	42407924	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF1	9138	broad.mit.edu	37	19	42407924	42407924	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF37	389337	broad.mit.edu	37	5	149001437	149001437	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF37	389337	broad.mit.edu	37	5	149001437	149001437	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111767915	111767915	+	Frame_Shift_Del	DEL	G	-	-	rs144455445		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27097629	27097629	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27097629	27097629	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC4	55130	broad.mit.edu	37	10	28270328	28270328	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC9	80210	broad.mit.edu	37	2	232142980	232142980	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35785901	35785901	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35785901	35785901	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARR3	407	broad.mit.edu	37	X	69497549	69497549	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC1	92714	broad.mit.edu	37	9	140508500	140508500	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC1	92714	broad.mit.edu	37	9	140508500	140508500	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSB	411	broad.mit.edu	37	5	78251369	78251369	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART3	419	broad.mit.edu	37	4	76955971	76955971	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AS3MT	57412	broad.mit.edu	37	10	104650268	104650268	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AS3MT	57412	broad.mit.edu	37	10	104632995	104632995	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131087181	131087181	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131146529	131146529	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB18	401036	broad.mit.edu	37	2	237149792	237149792	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB18	401036	broad.mit.edu	37	2	237149792	237149792	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB3	51130	broad.mit.edu	37	2	54014609	54014609	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB8	140461	broad.mit.edu	37	12	48543473	48543473	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB8	140461	broad.mit.edu	37	12	48543473	48543473	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB9	140462	broad.mit.edu	37	X	15268584	15268584	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB9	140462	broad.mit.edu	37	X	15268584	15268584	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC2	84164	broad.mit.edu	37	22	30218210	30218210	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC2	84164	broad.mit.edu	37	22	30218210	30218210	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101109584	101109584	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASIP	434	broad.mit.edu	37	20	32848288	32848288	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62559544	62559544	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62559544	62559544	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197069646	197069646	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176833754	176833754	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176838157	176838157	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176833754	176833754	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176838157	176838157	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176915180	176915180	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119567807	119567807	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119567807	119567807	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL1	171023	broad.mit.edu	37	20	31016158	31016158	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL1	171023	broad.mit.edu	37	20	31016158	31016158	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96809570	96809570	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG7	10533	broad.mit.edu	37	3	11372933	11372933	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATL1	51062	broad.mit.edu	37	14	51038741	51038741	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25925894	25925894	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10A	57194	broad.mit.edu	37	15	25925894	25925894	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160076380	160076380	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113470540	113470540	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113490624	113490624	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113470540	113470540	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11B	23200	broad.mit.edu	37	3	182555029	182555029	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138880973	138880974	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25276003	25276003	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25276003	25276003	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160098582	160098582	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160147170	160147170	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160147170	160147170	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B3	483	broad.mit.edu	37	3	141632747	141632747	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B3	483	broad.mit.edu	37	3	141632747	141632747	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90003833	90003833	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90029006	90029006	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36053418	36053418	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5A1	498	broad.mit.edu	37	18	43669547	43669547	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0D1	9114	broad.mit.edu	37	16	67487341	67487341	+	Intron	SNP	T	C	C	rs113084115		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0D2	245972	broad.mit.edu	37	8	87155196	87155197	+	Intron	DNP	CC	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1B1	525	broad.mit.edu	37	2	71191572	71191573	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54708348	54708348	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52511514	52511514	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52511514	52511514	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42487688	42487688	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26155990	26155990	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26155990	26155990	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B1	5205	broad.mit.edu	37	18	55368338	55368338	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	116925403	116925403	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3541497	3541497	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3541497	3541497	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142169888	142169888	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142279312	142279312	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142169888	142169888	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142279312	142279312	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16327913	16327915	+	In_Frame_Del	DEL	TGA	-	-	rs11969612	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L2	127002	broad.mit.edu	37	1	110030427	110030427	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKB	9212	broad.mit.edu	37	17	8113428	8113428	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKC	6795	broad.mit.edu	37	19	57744082	57744082	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKC	6795	broad.mit.edu	37	19	57744834	57744834	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR1A	552	broad.mit.edu	37	12	63543950	63543950	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN1	8312	broad.mit.edu	37	16	347741	347741	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90642323	90642323	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90642323	90642323	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11021105	11021105	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11021105	11021105	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11038955	11038955	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11058083	11058083	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143569926	143569926	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143623974	143623974	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69640530	69640530	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69758130	69758130	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69640530	69640530	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69758130	69758130	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BASE	317716	broad.mit.edu	37	20	31786021	31786021	+	RNA	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L2	23215	broad.mit.edu	37	1	171492734	171492734	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160284418	160284418	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156618623	156618623	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAN	63827	broad.mit.edu	37	1	156618623	156618623	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52674700	52674700	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58786579	58786579	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	59465990	59465990	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	59465992	59465992	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58786579	58786579	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS4	55653	broad.mit.edu	37	20	49458380	49458380	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS4	55653	broad.mit.edu	37	20	49458380	49458380	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165491239	165491239	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60688050	60688050	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60688050	60688050	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL6	604	broad.mit.edu	37	3	187447838	187447838	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL6	604	broad.mit.edu	37	3	187447838	187447838	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL8	606	broad.mit.edu	37	15	20874844	20874844	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136594296	136594296	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112053704	112053704	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112053704	112053704	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23596785	23596785	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCR	613	broad.mit.edu	37	22	23596785	23596785	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70806253	70806253	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70806253	70806253	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST1	7439	broad.mit.edu	37	11	61730375	61730375	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BFSP1	631	broad.mit.edu	37	20	17475142	17475142	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHMT	635	broad.mit.edu	37	5	78422045	78422045	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60566883	60566883	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60566883	60566883	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127816807	127816807	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC3	330	broad.mit.edu	37	11	102196379	102196379	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC7	79444	broad.mit.edu	37	20	61870965	61870965	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLM	641	broad.mit.edu	37	15	91294957	91294957	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLOC1S2	282991	broad.mit.edu	37	10	102039910	102039910	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1B	658	broad.mit.edu	37	4	96035850	96035850	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1B	658	broad.mit.edu	37	4	96035850	96035850	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43292056	43292056	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16437681	16437681	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31620702	31620702	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31620702	31620702	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36932541	36932541	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36932541	36932541	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCC3	79184	broad.mit.edu	37	X	154299928	154299928	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD4	23476	broad.mit.edu	37	19	15366997	15366997	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD4	23476	broad.mit.edu	37	19	15366997	15366997	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF1	2972	broad.mit.edu	37	14	105678536	105678536	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRS3	680	broad.mit.edu	37	X	135570317	135570317	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD1	54014	broad.mit.edu	37	21	40582651	40582651	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79965838	79965838	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSDC1	55108	broad.mit.edu	37	1	32834257	32834257	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSG	682	broad.mit.edu	37	19	582443	582443	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49690545	49690545	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTRC	8945	broad.mit.edu	37	10	103310676	103310676	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTRC	8945	broad.mit.edu	37	10	103310676	103310676	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111395637	111395637	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111395637	111395637	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111425235	111425235	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf107	219621	broad.mit.edu	37	10	63441108	63441108	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf111	221060	broad.mit.edu	37	10	15138469	15138469	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf111	221060	broad.mit.edu	37	10	15138469	15138469	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77818331	77818331	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77818331	77818331	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	78084270	78084270	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf27	219793	broad.mit.edu	37	10	72541683	72541683	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf27	219793	broad.mit.edu	37	10	72541683	72541683	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115540407	115540407	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128191331	128191331	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf96	374355	broad.mit.edu	37	10	118084765	118084765	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33565707	33565707	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82643578	82643578	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82643578	82643578	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf26	84190	broad.mit.edu	37	12	82796963	82796963	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf44	60673	broad.mit.edu	37	12	52467573	52467573	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf44	60673	broad.mit.edu	37	12	52467573	52467573	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf1	11161	broad.mit.edu	37	14	76123847	76123847	+	5'UTR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf44	81556	broad.mit.edu	37	15	65892078	65892078	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf44	81556	broad.mit.edu	37	15	65892078	65892078	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf7	9605	broad.mit.edu	37	16	89777626	89777626	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45447856	45447856	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf51	352909	broad.mit.edu	37	19	55670723	55670723	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf51	352909	broad.mit.edu	37	19	55677957	55677957	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244716037	244716037	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244716037	244716037	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179503096	179503096	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf21	81563	broad.mit.edu	37	1	184535642	184535642	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf21	81563	broad.mit.edu	37	1	184535642	184535642	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf61	10485	broad.mit.edu	37	1	156384530	156384530	+	Silent	SNP	C	G	G	rs144548564		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf69	200205	broad.mit.edu	37	1	228363178	228363178	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf69	200205	broad.mit.edu	37	1	228363178	228363178	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf91	56063	broad.mit.edu	37	1	32682977	32682977	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf91	56063	broad.mit.edu	37	1	32682977	32682977	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf103	24141	broad.mit.edu	37	20	9498764	9498764	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf12	55184	broad.mit.edu	37	20	18445979	18445979	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf160	140706	broad.mit.edu	37	20	30610285	30610285	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf166	128826	broad.mit.edu	37	20	61151440	61151440	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf166	128826	broad.mit.edu	37	20	61151440	61151440	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31676933	31676933	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31676933	31676933	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3262307	3262307	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf199	441951	broad.mit.edu	37	20	47895422	47895422	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf199	441951	broad.mit.edu	37	20	47895422	47895422	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf3	57136	broad.mit.edu	37	20	24964768	24964768	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf43	51507	broad.mit.edu	37	20	55052205	55052205	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf29	54084	broad.mit.edu	37	21	46011130	46011131	+	Intron	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf81	391267	broad.mit.edu	37	21	15323704	15323704	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf81	391267	broad.mit.edu	37	21	15323704	15323704	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf40	150383	broad.mit.edu	37	22	46640973	46640973	+	3'UTR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2	717	broad.mit.edu	37	6	31901508	31901508	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2	717	broad.mit.edu	37	6	31901508	31901508	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27800472	27800472	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27800472	27800472	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27800886	27800886	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf24	27013	broad.mit.edu	37	2	220039039	220039039	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf56	55471	broad.mit.edu	37	2	37464981	37464981	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf67	151050	broad.mit.edu	37	2	210969066	210969066	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf83	56918	broad.mit.edu	37	2	228497784	228497784	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf83	56918	broad.mit.edu	37	2	228497784	228497784	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf59	151963	broad.mit.edu	37	3	192516994	192516994	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf64	285203	broad.mit.edu	37	3	69050804	69050804	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf70	285382	broad.mit.edu	37	3	184801039	184801039	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf70	285382	broad.mit.edu	37	3	184801039	184801039	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4BPB	725	broad.mit.edu	37	1	207262802	207262802	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81504334	81504334	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf23	152992	broad.mit.edu	37	4	8467053	8467053	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf23	152992	broad.mit.edu	37	4	8467053	8467053	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf7	260436	broad.mit.edu	37	4	71096819	71096819	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf35	133383	broad.mit.edu	37	5	56208994	56208994	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf35	133383	broad.mit.edu	37	5	56208994	56208994	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41181413	41181413	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41199909	41199909	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41181413	41181413	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41199909	41199909	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97621182	97621182	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127796797	127796797	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf211	79624	broad.mit.edu	37	6	151789697	151789697	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf211	79624	broad.mit.edu	37	6	151789697	151789697	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf26	79034	broad.mit.edu	37	7	6634024	6634024	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf26	79034	broad.mit.edu	37	7	6634024	6634024	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf66	154907	broad.mit.edu	37	7	108524185	108524185	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8A	731	broad.mit.edu	37	1	57372551	57372551	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8A	731	broad.mit.edu	37	1	57372551	57372551	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57411382	57411382	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf31	286122	broad.mit.edu	37	8	144124453	144124453	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf31	286122	broad.mit.edu	37	8	144124453	144124453	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86249393	86249393	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86244666	86244666	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA1	759	broad.mit.edu	37	8	86249393	86249393	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA5B	11238	broad.mit.edu	37	X	15790764	15790764	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA5B	11238	broad.mit.edu	37	X	15790764	15790764	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9011799	9011799	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9011799	9011799	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121098917	121098917	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121098917	121098917	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13368154	13368154	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13443769	13443769	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13368154	13368154	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13443769	13443769	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181480712	181480712	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181719672	181719672	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181753014	181753014	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181480712	181480712	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181719672	181719672	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181753014	181753014	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81667327	81667327	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18807795	18807795	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18816495	18816495	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG2	10369	broad.mit.edu	37	22	37098576	37098576	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG2	10369	broad.mit.edu	37	22	37098576	37098576	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159161976	159161976	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS2	93664	broad.mit.edu	37	7	122526107	122526107	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71416736	71416736	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71416736	71416736	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKK1	84254	broad.mit.edu	37	17	3786361	3786361	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKK1	84254	broad.mit.edu	37	17	3786361	3786361	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKV	79012	broad.mit.edu	37	3	49897671	49897671	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKV	79012	broad.mit.edu	37	3	49897671	49897671	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200730088	200730088	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7805972	7805972	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7805972	7805972	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANX	821	broad.mit.edu	37	5	179134107	179134107	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44144038	44144038	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44144038	44144038	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230910379	230910379	+	Splice_Site	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC5	57082	broad.mit.edu	37	15	40895066	40895066	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC5	57082	broad.mit.edu	37	15	40895066	40895066	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104866398	104866398	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104879735	104879735	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ1	844	broad.mit.edu	37	1	160164856	160164856	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ1	844	broad.mit.edu	37	1	160164856	160164856	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAST	831	broad.mit.edu	37	5	96089902	96089902	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASZ1	54897	broad.mit.edu	37	1	10702815	10702815	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASZ1	54897	broad.mit.edu	37	1	10720135	10720135	+	Missense_Mutation	SNP	C	T	T	rs139953654		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER1	117144	broad.mit.edu	37	11	65793536	65793536	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER1	117144	broad.mit.edu	37	11	65793536	65793536	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119170450	119170450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119170450	119170450	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D1A	54862	broad.mit.edu	37	19	14029041	14029041	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCAR1	55749	broad.mit.edu	37	10	70515320	70515320	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCAR1	55749	broad.mit.edu	37	10	70515320	70515320	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC126	90693	broad.mit.edu	37	7	23662184	23662184	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC126	90693	broad.mit.edu	37	7	23662184	23662184	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC135	84229	broad.mit.edu	37	16	57732052	57732052	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC135	84229	broad.mit.edu	37	16	57761225	57761225	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179730380	179730380	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179730380	179730380	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179742850	179742850	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144B	284047	broad.mit.edu	37	17	18513562	18513562	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20279284	20279284	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC151	115948	broad.mit.edu	37	19	11542026	11542026	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159889169	159889169	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159889169	159889169	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC42	146849	broad.mit.edu	37	17	8644550	8644550	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191074839	191074839	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC54	84692	broad.mit.edu	37	3	107096581	107096581	+	Silent	SNP	A	C	C	rs117360444	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC62	84660	broad.mit.edu	37	12	123308005	123308005	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC62	84660	broad.mit.edu	37	12	123308005	123308005	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC6	8030	broad.mit.edu	37	10	61554281	61554281	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC6	8030	broad.mit.edu	37	10	61554281	61554281	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC70	83446	broad.mit.edu	37	13	52439604	52439604	+	Silent	SNP	G	C	C	rs112168960		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74A	90557	broad.mit.edu	37	2	132290040	132290040	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC74B	91409	broad.mit.edu	37	2	130899923	130899923	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC87	55231	broad.mit.edu	37	11	66357977	66357977	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC87	55231	broad.mit.edu	37	11	66357977	66357977	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64120219	64120219	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118764241	118764241	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118764241	118764241	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31118691	31118691	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL23	6368	broad.mit.edu	37	17	34341012	34341012	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL23	6368	broad.mit.edu	37	17	34341012	34341012	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNC	892	broad.mit.edu	37	6	99997442	99997442	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNC	892	broad.mit.edu	37	6	99997442	99997442	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCND1	595	broad.mit.edu	37	11	69456155	69456155	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCND1	595	broad.mit.edu	37	11	69456155	69456155	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNY	219771	broad.mit.edu	37	10	35814958	35814958	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR2	729230	broad.mit.edu	37	3	46401302	46401302	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT7	10574	broad.mit.edu	37	2	73476790	73476790	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD101	9398	broad.mit.edu	37	1	117552698	117552698	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74446008	74446008	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74446008	74446008	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1A	909	broad.mit.edu	37	1	158225198	158225198	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158299527	158299527	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35823739	35823739	+	Silent	SNP	G	T	T	rs145824675		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD276	80381	broad.mit.edu	37	15	74003564	74003564	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD276	80381	broad.mit.edu	37	15	73991925	73991925	+	Splice_Site	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD276	80381	broad.mit.edu	37	15	74003564	74003564	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300A	11314	broad.mit.edu	37	17	72469792	72469792	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51728894	51728894	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51738435	51738435	+	Missense_Mutation	SNP	G	T	T	rs1051198		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51742776	51742776	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51728292	51728292	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51728894	51728894	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51738435	51738435	+	Missense_Mutation	SNP	G	T	T	rs1051198		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51742776	51742776	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD44	960	broad.mit.edu	37	11	35243288	35243288	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD44	960	broad.mit.edu	37	11	35243288	35243288	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60889133	60889133	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5	921	broad.mit.edu	37	11	60889133	60889133	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD83	9308	broad.mit.edu	37	6	14131775	14131775	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD83	9308	broad.mit.edu	37	6	14131775	14131775	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121828258	121828258	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149999767	149999767	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99L2	83692	broad.mit.edu	37	X	149999767	149999767	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100961683	100961683	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100983735	100983735	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25B	994	broad.mit.edu	37	20	3783727	3783727	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC34	997	broad.mit.edu	37	19	536054	536054	+	Intron	SNP	G	A	A	rs147136672	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227381664	227381664	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42SE1	56882	broad.mit.edu	37	1	151028082	151028082	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21947917	21947917	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21947917	21947917	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24511389	24511390	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24511390	24511390	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24593464	24593464	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65025618	65025618	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65025618	65025618	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21760782	21760782	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21760782	21760782	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	22580668	22580668	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73375217	73375217	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73501649	73501649	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73375217	73375217	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25585688	25585688	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25589787	25589787	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25589787	25589787	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60485725	60485725	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31313631	31313631	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31313631	31313631	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63547767	63547767	+	Frame_Shift_Del	DEL	G	-	-	rs150661165		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63547767	63547767	+	Frame_Shift_Del	DEL	G	-	-	rs150661165		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105653116	105653116	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105653116	105653116	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK11B	984	broad.mit.edu	37	1	1647827	1647827	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40134118	40134118	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40134118	40134118	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK7	1022	broad.mit.edu	37	5	68531324	68531324	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK7	1022	broad.mit.edu	37	5	68531324	68531324	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN2A	1029	broad.mit.edu	37	9	21971203	21971203	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN2A	1029	broad.mit.edu	37	9	21971203	21971203	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4892412	4892412	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4892412	4892412	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2B	51032	broad.mit.edu	37	1	15802845	15802845	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34833913	34833913	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF4	56853	broad.mit.edu	37	18	34833913	34833913	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104067129	104067129	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49059596	49059597	+	Missense_Mutation	DNP	CT	TA	TA			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49059596	49059597	+	Missense_Mutation	DNP	CT	TA	TA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117241626	117241626	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP170	9859	broad.mit.edu	37	1	243327639	243327639	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	179983409	179983409	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES8	283848	broad.mit.edu	37	16	67034819	67034819	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFDP1	10428	broad.mit.edu	37	16	75429091	75429091	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR2	3080	broad.mit.edu	37	1	196928128	196928128	+	Missense_Mutation	SNP	G	C	C	rs144918980		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196946692	196946692	+	5'UTR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFLAR	8837	broad.mit.edu	37	2	201994633	201994633	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4429821	4429821	+	Intron	SNP	G	T	T	rs117668305	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4429821	4429821	+	Intron	SNP	G	T	T	rs117668305	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6692639	6692639	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6212447	6212447	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40118549	40118549	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40118549	40118549	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61763057	61763057	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD8	57680	broad.mit.edu	37	14	21860668	21860668	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK2	11200	broad.mit.edu	37	22	29120918	29120918	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK2	11200	broad.mit.edu	37	22	29120918	29120918	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIA	27159	broad.mit.edu	37	1	111860531	111860531	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIT1	1118	broad.mit.edu	37	1	203191503	203191503	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHKA	1119	broad.mit.edu	37	11	67833136	67833136	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	404849	404849	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP2B	25978	broad.mit.edu	37	3	87302615	87302615	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP4B	128866	broad.mit.edu	37	20	32436305	32436305	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29341861	29341863	+	Intron	DEL	CTT	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184102332	184102332	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184102332	184102332	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175614714	175614714	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175614714	175614714	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB3	1142	broad.mit.edu	37	8	42585954	42585954	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST11	50515	broad.mit.edu	37	12	105150924	105150924	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIC	23152	broad.mit.edu	37	19	42791043	42791043	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120150570	120150570	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113518370	113518370	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53036485	53036485	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46784137	46784137	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46784137	46784137	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86919069	86919070	+	Frame_Shift_Del	DEL	GC	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86909731	86909731	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86919069	86919070	+	Frame_Shift_Del	DEL	GC	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16359840	16359840	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN17	26285	broad.mit.edu	37	21	31538717	31538717	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN17	26285	broad.mit.edu	37	21	31538945	31538945	+	5'Flank	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC14A	161198	broad.mit.edu	37	14	38724115	38724115	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC16A	23274	broad.mit.edu	37	16	11133706	11133706	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC17A	388512	broad.mit.edu	37	19	14710889	14710889	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC17A	388512	broad.mit.edu	37	19	14710889	14710889	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71039605	71039605	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71039605	71039605	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178040602	178040602	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178040602	178040602	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN3	1201	broad.mit.edu	37	16	28493450	28493450	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN5	1203	broad.mit.edu	37	13	77566091	77566091	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN6	54982	broad.mit.edu	37	15	68547178	68547178	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN6	54982	broad.mit.edu	37	15	68547178	68547178	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLNK	116449	broad.mit.edu	37	4	10529635	10529635	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19175510	19175510	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLUAP1	23059	broad.mit.edu	37	16	3570053	3570053	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100515473	100515473	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100523170	100523170	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100523170	100523170	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10288575	10288575	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10288575	10288575	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMPK2	129607	broad.mit.edu	37	2	7001425	7001425	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMPK2	129607	broad.mit.edu	37	2	7001425	7001425	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM5	116173	broad.mit.edu	37	14	23846328	23846328	+	5'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP1	84735	broad.mit.edu	37	18	72244402	72244402	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150912332	150912332	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150912332	150912332	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNIH3	149111	broad.mit.edu	37	1	224872505	224872505	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154735744	154735744	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM3	26505	broad.mit.edu	37	2	97493652	97493652	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT3	4849	broad.mit.edu	37	19	54652318	54652318	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTD1	124817	broad.mit.edu	37	17	40959981	40959981	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTD1	124817	broad.mit.edu	37	17	40959981	40959981	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41410526	41410526	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41410526	41410526	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125671587	125671587	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125405304	125405304	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125671587	125671587	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTROB	116840	broad.mit.edu	37	17	7837918	7837918	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51261234	51261234	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51261234	51261234	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103487276	103487276	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103427580	103427580	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103440440	103440440	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103487276	103487276	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121221975	121221976	+	Intron	INS	-	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121295936	121295936	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139763842	139763842	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139763842	139763842	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86578265	86578265	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86554868	86554869	+	Missense_Mutation	DNP	GC	TA	TA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86578265	86578265	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7399921	7399921	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7399921	7399921	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189859246	189859246	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189870875	189870875	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189839268	189839268	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189859246	189859246	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189870875	189870875	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110821965	110821965	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110839027	110839027	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110817207	110817207	+	Splice_Site	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110821965	110821965	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107554022	107554023	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137688241	137688241	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137688241	137688241	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189929691	189929691	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189912899	189912899	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189929691	189929691	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189943874	189943874	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71004033	71004033	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71004033	71004033	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A2	1298	broad.mit.edu	37	1	40777384	40777384	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A2	1298	broad.mit.edu	37	1	40777384	40777384	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61461738	61461738	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3685153	3685153	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3685153	3685153	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15495391	15495391	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15495391	15495391	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG	22820	broad.mit.edu	37	3	128984247	128984247	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG	22820	broad.mit.edu	37	3	128984247	128984247	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ9	57017	broad.mit.edu	37	16	57490421	57490421	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ9	57017	broad.mit.edu	37	16	57490421	57490421	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47605760	47605760	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1C	23603	broad.mit.edu	37	12	109055932	109055932	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1C	23603	broad.mit.edu	37	12	109055932	109055932	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX4I2	84701	broad.mit.edu	37	20	30232608	30232608	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX4I2	84701	broad.mit.edu	37	20	30232608	30232608	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166325218	166325218	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX2	10814	broad.mit.edu	37	5	175305790	175305790	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE6	9362	broad.mit.edu	37	14	24546933	24546933	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211465465	211465465	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211542778	211542778	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF2	53981	broad.mit.edu	37	14	92609541	92609541	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008905	88008905	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM1	56265	broad.mit.edu	37	20	2775092	2775092	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125506268	125506268	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207741152	207741152	+	Intron	DEL	T	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207741152	207741152	+	Intron	DEL	T	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB2	286204	broad.mit.edu	37	9	126129407	126129407	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L3	84699	broad.mit.edu	37	19	4170211	4170211	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L3	84699	broad.mit.edu	37	19	4170211	4170211	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB5	9586	broad.mit.edu	37	7	28848855	28848855	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR1	1394	broad.mit.edu	37	17	43911514	43911514	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNKL1	51340	broad.mit.edu	37	20	20025969	20025969	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAM	56253	broad.mit.edu	37	11	122735462	122735462	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAM	56253	broad.mit.edu	37	11	122735462	122735462	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY1	1407	broad.mit.edu	37	12	107395162	107395162	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY1	1407	broad.mit.edu	37	12	107395162	107395162	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149433914	149433914	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149449639	149449639	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149433914	149433914	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF1R	1436	broad.mit.edu	37	5	149449639	149449639	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1422835	1422835	+	Silent	SNP	C	T	T	rs145829351	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3265561	3265561	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3265561	3265561	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3267178	3267178	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34052087	34052087	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34033349	34033349	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34052087	34052087	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34082431	34082431	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113323366	113323366	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113697836	113697836	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114185958	114185958	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113323366	113323366	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113697836	113697836	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114185958	114185958	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1G1	53944	broad.mit.edu	37	15	64499783	64499783	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1G1	53944	broad.mit.edu	37	15	64499783	64499783	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST1	1469	broad.mit.edu	37	20	23729627	23729627	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST1	1469	broad.mit.edu	37	20	23729627	23729627	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST4	1472	broad.mit.edu	37	20	23667611	23667611	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19998839	19998839	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80772262	80772262	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80772262	80772262	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	67829219	67829219	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	67829219	67829219	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNB1	1499	broad.mit.edu	37	3	41266113	41266113	+	Missense_Mutation	SNP	C	G	G	rs121913403		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNB1	1499	broad.mit.edu	37	3	41266113	41266113	+	Missense_Mutation	SNP	C	G	G	rs121913403		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNBL1	56259	broad.mit.edu	37	20	36407879	36407879	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND1	1500	broad.mit.edu	37	11	57572182	57572182	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11082809	11082809	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11082809	11082809	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSK	1513	broad.mit.edu	37	1	150772099	150772099	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSK	1513	broad.mit.edu	37	1	150779124	150779124	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16911876	16911876	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107965125	107965125	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTC	51076	broad.mit.edu	37	10	101502847	101502847	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101671405	101671405	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101916812	101916812	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101671405	101671405	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101916812	101916812	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111733300	111733300	+	Intron	DEL	A	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49052639	49052639	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44873293	44873293	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR2	3579	broad.mit.edu	37	2	219000386	219000386	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR2	3579	broad.mit.edu	37	2	219000386	219000386	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR4	7852	broad.mit.edu	37	2	136872465	136872465	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR4	7852	broad.mit.edu	37	2	136872465	136872465	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	36007664	36007664	+	3'UTR	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	36007664	36007664	+	3'UTR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143955876	143955876	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143955876	143955876	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143995833	143995833	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143995833	143995833	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP17A1	1586	broad.mit.edu	37	10	104596782	104596782	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A1	1543	broad.mit.edu	37	15	75014861	75014861	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A1	1543	broad.mit.edu	37	15	75014929	75014929	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A1	1543	broad.mit.edu	37	15	75014861	75014861	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A1	1543	broad.mit.edu	37	15	75014929	75014929	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP24A1	1591	broad.mit.edu	37	20	52774070	52774070	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26A1	1592	broad.mit.edu	37	10	94836200	94836200	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26A1	1592	broad.mit.edu	37	10	94836200	94836200	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26C1	340665	broad.mit.edu	37	10	94828349	94828349	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A13	1553	broad.mit.edu	37	19	41601045	41601045	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A13	1553	broad.mit.edu	37	19	41601045	41601045	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2B6	1555	broad.mit.edu	37	19	41509988	41509988	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C18	1562	broad.mit.edu	37	10	96447589	96447589	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C18	1562	broad.mit.edu	37	10	96454680	96454680	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C18	1562	broad.mit.edu	37	10	96454680	96454680	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2S1	29785	broad.mit.edu	37	19	41700360	41700360	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2S1	29785	broad.mit.edu	37	19	41700360	41700360	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99308411	99308411	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99313318	99313318	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99308411	99308411	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99313318	99313318	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99318002	99318002	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15756552	15756552	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4X1	260293	broad.mit.edu	37	1	47505153	47505153	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4X1	260293	broad.mit.edu	37	1	47505153	47505153	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65680384	65680384	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM1	23002	broad.mit.edu	37	14	59821814	59821814	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	59002449	59002449	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72053322	72053322	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72131072	72131072	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59112366	59112366	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59112366	59112366	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61493493	61493493	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAK	26007	broad.mit.edu	37	11	61106638	61106638	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBR1	51163	broad.mit.edu	37	3	137880881	137880881	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBR1	51163	broad.mit.edu	37	3	137880881	137880881	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45410214	45410214	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24586028	24586028	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24586028	24586028	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298590	125298590	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125298590	125298590	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF5	8816	broad.mit.edu	37	14	69550293	69550293	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997645	27997645	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997961	27997962	+	Frame_Shift_Del	DEL	CG	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997645	27997645	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997961	27997962	+	Frame_Shift_Del	DEL	CG	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160209914	160209914	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160209914	160209914	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155161978	155161978	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36699915	36699915	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36699915	36699915	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976830	14976830	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDA1	79016	broad.mit.edu	37	19	17420415	17420415	+	5'UTR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61080925	61080925	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61080925	61080925	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103908684	103908684	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDIT4L	115265	broad.mit.edu	37	4	101111162	101111162	+	5'UTR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDIT4L	115265	broad.mit.edu	37	4	101111162	101111162	+	5'UTR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162735901	162735901	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX10	1662	broad.mit.edu	37	11	108709331	108709331	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX10	1662	broad.mit.edu	37	11	108709331	108709331	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX17	10521	broad.mit.edu	37	22	38891885	38891885	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118579310	118579310	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118579310	118579310	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX1	1653	broad.mit.edu	37	2	15736941	15736941	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX46	9879	broad.mit.edu	37	5	134118606	134118606	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX46	9879	broad.mit.edu	37	5	134118606	134118606	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70670189	70670189	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX59	83479	broad.mit.edu	37	1	200617382	200617382	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60	55601	broad.mit.edu	37	4	169196690	169196690	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49986629	49986629	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB113	245927	broad.mit.edu	37	6	49936492	49936492	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29966127	29966127	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29966127	29966127	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB128	245939	broad.mit.edu	37	20	170382	170382	+	5'Flank	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB128	245939	broad.mit.edu	37	20	170382	170382	+	5'Flank	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEGS1	8560	broad.mit.edu	37	1	224377623	224377623	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197704817	197704817	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197704817	197704817	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142190928	142190928	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142190928	142190928	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31577438	31577438	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32217452	32217452	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32217561	32217561	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32217452	32217452	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC5	9681	broad.mit.edu	37	22	32217561	32217561	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFFA	1676	broad.mit.edu	37	1	10529148	10529148	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117187363	117187364	+	Intron	INS	-	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117228579	117228579	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117187363	117187364	+	Intron	INS	-	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117228579	117228579	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT2	84649	broad.mit.edu	37	11	75507352	75507352	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT2	84649	broad.mit.edu	37	11	75507352	75507352	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234346773	234346774	+	Intron	INS	-	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	185982979	185982979	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186024800	186024800	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50136121	50136122	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHFR	1719	broad.mit.edu	37	5	79950244	79950244	+	Frame_Shift_Del	DEL	T	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHFR	1719	broad.mit.edu	37	5	79950244	79950244	+	Frame_Shift_Del	DEL	T	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2209550	2209550	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2209550	2209550	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125453184	125453184	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125453184	125453184	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72140089	72140089	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72140089	72140089	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39088536	39088536	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39088536	39088536	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182856179	182856179	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140956994	140956994	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140956994	140956994	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH2	1730	broad.mit.edu	37	X	96220166	96220166	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60590252	60590252	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51069067	51069067	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	232894773	232894773	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	232894773	232894773	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3	22894	broad.mit.edu	37	13	73334716	73334716	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83673925	83673925	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83691417	83691417	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83673925	83673925	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83691417	83691417	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	85164562	85164562	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1626285	1626285	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP2	9228	broad.mit.edu	37	8	1626285	1626285	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP5	9787	broad.mit.edu	37	14	55621377	55621377	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP5	9787	broad.mit.edu	37	14	55644032	55644032	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124377590	124377590	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32383266	32383266	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32827848	32827848	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78296957	78296957	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78340326	78340326	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78296957	78296957	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMGDH	29958	broad.mit.edu	37	5	78340326	78340326	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT2	10655	broad.mit.edu	37	9	1056458	1056458	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT2	10655	broad.mit.edu	37	9	1056458	1056458	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNA2	1763	broad.mit.edu	37	10	70179499	70179499	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21640205	21640205	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21783936	21783936	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21640205	21640205	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21723442	21723442	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21783936	21783936	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH12	201625	broad.mit.edu	37	3	57487972	57487972	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH12	201625	broad.mit.edu	37	3	57487972	57487972	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76455187	76455187	+	Missense_Mutation	SNP	C	G	G	rs145638188	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52429689	52429689	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7661802	7661802	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7661802	7661802	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	20959736	20959736	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13753672	13753672	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13753672	13753672	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196664137	196664137	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38790861	38790861	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38790861	38790861	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11584254	11584254	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11584254	11584254	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11592684	11592684	+	Intron	DEL	T	-	-	rs143029669		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34506884	34506884	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJA3	9093	broad.mit.edu	37	16	4496846	4496846	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB13	374407	broad.mit.edu	37	11	73680451	73680451	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183608469	183608469	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183608469	183608469	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65849892	65849892	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65849892	65849892	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6591340	6591340	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6588332	6588332	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6591340	6591340	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	172277965	172277965	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	172308018	172308018	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94337613	94337613	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169267790	169267790	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51392312	51392312	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	50825099	50825099	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51275048	51275048	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51392312	51392312	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111379521	111379521	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	286583	286583	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	286583	286583	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK5	55816	broad.mit.edu	37	20	53205191	53205191	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK5	55816	broad.mit.edu	37	20	53205191	53205191	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68024510	68024510	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68024933	68024934	+	Intron	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68024933	68024934	+	Intron	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73190390	73190390	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73190390	73190390	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116548969	116548969	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162876803	162876803	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154672477	154672477	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP8	54878	broad.mit.edu	37	15	65799772	65799772	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113286152	113286152	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD2	1813	broad.mit.edu	37	11	113286152	113286152	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113866313	113866313	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113866313	113866313	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113866448	113866449	+	Intron	INS	-	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113890706	113890706	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD5	1816	broad.mit.edu	37	4	9784051	9784051	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD5	1816	broad.mit.edu	37	4	9784051	9784051	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28574373	28574373	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28574373	28574373	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41506074	41506074	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41741184	41741184	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSEL	92126	broad.mit.edu	37	18	65180123	65180123	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29126355	29126355	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28993526	28993526	+	Silent	SNP	C	A	A	rs147705128	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28993526	28993526	+	Silent	SNP	C	A	A	rs147705128	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSN1	79980	broad.mit.edu	37	20	35381109	35381109	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56483314	56483314	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56401663	56401663	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56483314	56483314	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32405319	32405319	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32438301	32438301	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNB	1838	broad.mit.edu	37	2	25678412	25678412	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX2	113878	broad.mit.edu	37	7	76111922	76111922	+	Silent	SNP	T	C	C	rs141436878		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX2	113878	broad.mit.edu	37	7	76111922	76111922	+	Silent	SNP	T	C	C	rs141436878		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45430223	45430223	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45397883	45397883	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45397883	45397883	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS3L	56931	broad.mit.edu	37	19	5788290	5788290	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP11	8446	broad.mit.edu	37	2	73993667	73993667	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP13	51207	broad.mit.edu	37	10	76857569	76857569	+	3'UTR	SNP	G	A	A	rs148137334		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP21	63904	broad.mit.edu	37	X	44703735	44703735	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP21	63904	broad.mit.edu	37	X	44703735	44703735	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	312008	312008	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348851	348851	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP28	285193	broad.mit.edu	37	2	241500167	241500167	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL2	1856	broad.mit.edu	37	17	7133927	7133927	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL2	1856	broad.mit.edu	37	17	7133927	7133927	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYM	54808	broad.mit.edu	37	18	46784877	46784877	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103106399	103106399	+	Splice_Site	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103106399	103106399	+	Splice_Site	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNLT3	6990	broad.mit.edu	37	X	37700255	37700255	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71883181	71883181	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71883181	71883181	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158158030	158158030	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43630025	43630025	+	3'UTR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65824387	65824387	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	128060645	128060645	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEFSEC	60678	broad.mit.edu	37	3	128060645	128060645	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEPD1	80820	broad.mit.edu	37	7	36194191	36194191	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEPD1	80820	broad.mit.edu	37	7	36194191	36194191	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEPD1	80820	broad.mit.edu	37	7	36336752	36336752	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	44177979	44177979	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55259306	55259306	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55259306	55259306	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55259501	55259501	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C1	26523	broad.mit.edu	37	1	36359219	36359219	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3I	8668	broad.mit.edu	37	1	32687873	32687873	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3K	27335	broad.mit.edu	37	19	39114613	39114613	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4B	1975	broad.mit.edu	37	12	53400128	53400128	+	5'UTR	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4ENIF1	56478	broad.mit.edu	37	22	31850252	31850252	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184039092	184039092	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184044714	184044714	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF5B	9669	broad.mit.edu	37	2	99985017	99985017	+	Missense_Mutation	SNP	G	C	C	rs3205291		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23693561	23693561	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23762245	23762245	+	Translation_Start_Site	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23693561	23693561	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL2	1993	broad.mit.edu	37	9	23762245	23762245	+	Translation_Start_Site	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37382167	37382167	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37382167	37382167	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO2	63916	broad.mit.edu	37	20	45002126	45002126	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO2	63916	broad.mit.edu	37	20	45002126	45002126	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO3	79767	broad.mit.edu	37	16	67236949	67236949	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73461085	73461085	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP2	55250	broad.mit.edu	37	18	33734940	33734940	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP2	55250	broad.mit.edu	37	18	33734940	33734940	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN3	90187	broad.mit.edu	37	20	39990940	39990940	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML3	256364	broad.mit.edu	37	11	62372924	62372924	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42511835	42511835	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42511835	42511835	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77076939	77076939	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43843788	43843788	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43930179	43930179	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120577193	120577193	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120577193	120577193	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120581375	120581375	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTHD1	150350	broad.mit.edu	37	22	40140274	40140274	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD1	953	broad.mit.edu	37	10	97605318	97605318	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132539638	132539638	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132561057	132561057	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132561163	132561163	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132498236	132498236	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132539638	132539638	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132546780	132546780	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132561057	132561057	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132561163	132561163	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111519791	111519791	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111519791	111519791	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPC2	26122	broad.mit.edu	37	2	149402778	149402778	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPC2	26122	broad.mit.edu	37	2	149402778	149402778	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA10	284656	broad.mit.edu	37	1	38188721	38188721	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA10	284656	broad.mit.edu	37	1	38188721	38188721	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89528582	89528582	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66467425	66467425	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66467425	66467425	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706570	96706570	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706570	96706570	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96962921	96962921	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	94068026	94068026	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670262	134670262	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134851748	134851748	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23110886	23110886	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110299529	110299529	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPYC	1833	broad.mit.edu	37	12	91365646	91365647	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37871871	37871871	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212812224	212812224	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50679084	50679084	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERGIC2	51290	broad.mit.edu	37	12	29514672	29514672	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN1	2081	broad.mit.edu	37	17	62141442	62141442	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERO1LB	56605	broad.mit.edu	37	1	236415488	236415488	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESAM	90952	broad.mit.edu	37	11	124624473	124624473	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESAM	90952	broad.mit.edu	37	11	124624473	124624473	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRA	2101	broad.mit.edu	37	11	64081701	64081701	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRA	2101	broad.mit.edu	37	11	64081701	64081701	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76966335	76966335	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76966335	76966335	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFA	2108	broad.mit.edu	37	15	76553566	76553566	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFA	2108	broad.mit.edu	37	15	76553566	76553566	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159611593	159611593	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159611593	159611593	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETS2	2114	broad.mit.edu	37	21	40194759	40194759	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETS2	2114	broad.mit.edu	37	21	40194759	40194759	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	11991992	11991992	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	12022496	12022496	+	Missense_Mutation	SNP	T	C	C	rs145477191	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPLL	645027	broad.mit.edu	37	17	18284947	18284947	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPLL	645027	broad.mit.edu	37	17	18284947	18284947	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3L	283849	broad.mit.edu	37	16	67218614	67218614	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC7	23265	broad.mit.edu	37	17	74094015	74094015	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC7	23265	broad.mit.edu	37	17	74094015	74094015	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11128685	11128685	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72123457	72123457	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72123457	72123457	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72128921	72128921	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	65443453	65443453	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYS	346007	broad.mit.edu	37	6	65443453	65443453	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148513776	148513776	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148513776	148513776	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148526947	148526947	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169528470	169528470	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169528470	169528470	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154133184	154133184	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154133184	154133184	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FADS6	283985	broad.mit.edu	37	17	72875562	72875562	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14563219	14563219	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14563800	14563800	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14563219	14563219	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14563800	14563800	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM116A	201627	broad.mit.edu	37	3	57651773	57651773	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM116A	201627	broad.mit.edu	37	3	57658049	57658049	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM118A	55007	broad.mit.edu	37	22	45731124	45731124	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM119A	151194	broad.mit.edu	37	2	208489133	208489133	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184863020	184863020	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143056144	143056144	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89671609	89671609	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61028318	61028318	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61028318	61028318	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153A	285596	broad.mit.edu	37	5	177163717	177163717	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153A	285596	broad.mit.edu	37	5	177163717	177163717	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	18941665	18941665	+	Missense_Mutation	SNP	C	T	T	rs144484870	byFrequency	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154A	158297	broad.mit.edu	37	9	18941665	18941665	+	Missense_Mutation	SNP	C	T	T	rs144484870	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM155A	728215	broad.mit.edu	37	13	107973308	107973308	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187611700	187611700	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM172A	83989	broad.mit.edu	37	5	92956752	92956757	+	In_Frame_Del	DEL	TGGTCT	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM175A	84142	broad.mit.edu	37	4	84384865	84384865	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45523813	45523813	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45523813	45523813	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189A1	23359	broad.mit.edu	37	15	29527256	29527256	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190B	54462	broad.mit.edu	37	10	86185688	86185688	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190B	54462	broad.mit.edu	37	10	86185688	86185688	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21A	387680	broad.mit.edu	37	10	51826390	51826390	+	5'Flank	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46280389	46280389	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46279925	46279925	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM43B	163933	broad.mit.edu	37	1	20879649	20879649	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM43B	163933	broad.mit.edu	37	1	20879649	20879649	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24332337	24332337	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114453161	114453161	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177242592	177242592	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190068179	190068179	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067152	190067152	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190068179	190068179	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212798989	212798989	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90535364	90535364	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90535364	90535364	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM7A2	100288380	broad.mit.edu	37	15	30875077	30875078	+	Intron	INS	-	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87516625	87516625	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54735507	54735507	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45624670	45624670	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45624672	45624672	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45644332	45644332	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163029265	163029265	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	98996183	98996183	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	98996183	98996183	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD5	60493	broad.mit.edu	37	20	3127278	3127278	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD5	60493	broad.mit.edu	37	20	3127278	3127278	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTK	10922	broad.mit.edu	37	7	150774063	150774063	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTK	10922	broad.mit.edu	37	7	150774531	150774531	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150921751	150921751	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150924904	150924904	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150921751	150921751	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150924904	150924904	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92532943	92532943	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48766916	48766916	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48712914	48712914	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48766916	48766916	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48805800	48805800	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48830057	48830057	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127727873	127727873	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127728854	127728854	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8151238	8151238	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8176733	8176733	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8151238	8151238	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8176733	8176733	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL17	64839	broad.mit.edu	37	5	107560015	107560015	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928326	15928326	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15928326	15928326	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15936692	15936692	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161519645	161519645	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161519645	161519645	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHO1	23149	broad.mit.edu	37	19	17893966	17893966	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHO1	23149	broad.mit.edu	37	19	17893966	17893966	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137778453	137778453	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137778453	137778453	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157719510	157719510	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157719510	157719510	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157551288	157551288	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157551323	157551323	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157551288	157551288	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157551323	157551323	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157491004	157491004	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEM1C	56929	broad.mit.edu	37	5	114879140	114879140	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEM1C	56929	broad.mit.edu	37	5	114879140	114879140	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L5	90342	broad.mit.edu	37	2	97368993	97368993	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L5	90342	broad.mit.edu	37	2	97368993	97368993	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108290708	108290708	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD3	89846	broad.mit.edu	37	9	95773525	95773525	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95528485	95528485	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176518125	176518125	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135288688	135288688	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135288688	135288688	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIG4	9896	broad.mit.edu	37	6	110098260	110098260	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIG4	9896	broad.mit.edu	37	6	110098260	110098260	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50514983	50514983	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76029653	76029653	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP1B	2281	broad.mit.edu	37	2	24276675	24276675	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP1B	2281	broad.mit.edu	37	2	24276675	24276675	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281538	152281538	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281538	152281538	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285143	152285143	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84530475	84530475	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43950	347127	broad.mit.edu	37	9	84530475	84530475	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58116633	58116633	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58116633	58116633	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128486266	128486267	+	Intron	DNP	GG	CT	CT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	29001982	29001982	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28880878	28880878	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28971083	28971083	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	29001982	29001982	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28578214	28578214	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28578214	28578214	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180043888	180043888	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171240671	171240671	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171250036	171250036	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1NB	158521	broad.mit.edu	37	X	147106529	147106529	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1NB	158521	broad.mit.edu	37	X	147106529	147106529	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216279643	216279643	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	171830226	171830226	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	171830226	171830226	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	172025377	172025377	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR3	2352	broad.mit.edu	37	11	71850011	71850011	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXE3	2301	broad.mit.edu	37	1	47882444	47882444	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR2	2358	broad.mit.edu	37	19	52272003	52272003	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR2	2358	broad.mit.edu	37	19	52272902	52272902	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR3	2359	broad.mit.edu	37	19	52327146	52327146	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR3	2359	broad.mit.edu	37	19	52327146	52327146	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79399136	79399136	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39448549	39448549	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39435727	39435727	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39448549	39448549	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85863297	85863297	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85863297	85863297	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13702486	13702486	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13702486	13702486	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131234537	131234537	+	Intron	DEL	T	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131234537	131234537	+	Intron	DEL	T	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCN3	29999	broad.mit.edu	37	7	127235724	127235726	+	In_Frame_Del	DEL	GCA	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSCN3	29999	broad.mit.edu	37	7	127235724	127235726	+	In_Frame_Del	DEL	GCA	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD2	123722	broad.mit.edu	37	15	83451385	83451385	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD2	123722	broad.mit.edu	37	15	83451385	83451385	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHB	2488	broad.mit.edu	37	11	30253355	30253355	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHB	2488	broad.mit.edu	37	11	30253355	30253355	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL4	23105	broad.mit.edu	37	5	132556579	132556579	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTHL17	53940	broad.mit.edu	37	X	31089993	31089993	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTHL17	53940	broad.mit.edu	37	X	31089993	31089993	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61897138	61897138	+	3'UTR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61897138	61897138	+	3'UTR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66200212	66200212	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66200212	66200212	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXC1	26515	broad.mit.edu	37	11	6503179	6503179	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXC1	26515	broad.mit.edu	37	11	6503179	6503179	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G3BP1	10146	broad.mit.edu	37	5	151170615	151170615	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17446055	17446055	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17446055	17446055	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161115882	161115882	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161521031	161521031	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27765258	27765258	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89890150	89890150	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89888774	89888774	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89890150	89890150	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171715359	171715359	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171715359	171715359	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALK2	2585	broad.mit.edu	37	15	49611952	49611952	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALK2	2585	broad.mit.edu	37	15	49611952	49611952	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153796519	153796519	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153796538	153796538	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153796519	153796519	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153796538	153796538	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	154996776	154996776	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155102561	155102561	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155143676	155143676	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT4	8693	broad.mit.edu	37	12	89916936	89916936	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT4	8693	broad.mit.edu	37	12	89917436	89917436	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16249873	16249873	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16249873	16249873	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128111650	128111650	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128111650	128111650	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARS	2617	broad.mit.edu	37	7	30649288	30649288	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARS	2617	broad.mit.edu	37	7	30649288	30649288	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101018004	101018004	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS6	2621	broad.mit.edu	37	13	114542677	114542677	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS6	2621	broad.mit.edu	37	13	114542677	114542677	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8111426	8111426	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA3	2625	broad.mit.edu	37	10	8111426	8111426	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153825474	153825474	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA	2629	broad.mit.edu	37	1	155209349	155209349	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89652832	89652832	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP5	115362	broad.mit.edu	37	1	89727872	89727872	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP5	115362	broad.mit.edu	37	1	89727872	89727872	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34117954	34117954	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44184835	44184835	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF10	2662	broad.mit.edu	37	10	48428803	48428803	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF10	2662	broad.mit.edu	37	10	48428803	48428803	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEMIN7	79760	broad.mit.edu	37	19	45593530	45593530	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA3	2676	broad.mit.edu	37	5	137593712	137593712	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGH	8836	broad.mit.edu	37	8	63930053	63930053	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33438059	33438059	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33442458	33442458	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33438059	33438059	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT7	2686	broad.mit.edu	37	20	33442458	33442458	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH2	2689	broad.mit.edu	37	17	61959224	61959224	+	Splice_Site	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHDC	84514	broad.mit.edu	37	17	40344578	40344578	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHDC	84514	broad.mit.edu	37	17	40344578	40344578	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31011704	31011704	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRHR	2692	broad.mit.edu	37	7	31011704	31011704	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA5	2702	broad.mit.edu	37	1	147230857	147230857	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB4	127534	broad.mit.edu	37	1	35227416	35227416	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121747078	121747078	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLO1	2739	broad.mit.edu	37	6	38670747	38670747	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175598517	175598517	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLTP	51228	broad.mit.edu	37	12	110290713	110290713	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD1	2746	broad.mit.edu	37	10	88820283	88820283	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYAT	10249	broad.mit.edu	37	11	58477469	58477469	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYAT	10249	broad.mit.edu	37	11	58477469	58477469	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYAT	10249	broad.mit.edu	37	11	58491902	58491902	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYCTK	132158	broad.mit.edu	37	3	52324415	52324415	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GM2A	2760	broad.mit.edu	37	5	150760646	150760646	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GM2A	2760	broad.mit.edu	37	5	150760646	150760646	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	1930451	1930451	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	1930451	1930451	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GML	2765	broad.mit.edu	37	8	143928027	143928027	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GML	2765	broad.mit.edu	37	8	143928027	143928027	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155615825	155615825	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155615825	155615825	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA11	2767	broad.mit.edu	37	19	3118848	3118848	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA1	2800	broad.mit.edu	37	9	127651448	127651448	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA1	2800	broad.mit.edu	37	9	127651448	127651448	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2B	55592	broad.mit.edu	37	12	100561198	100561198	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2B	55592	broad.mit.edu	37	12	100561198	100561198	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133358786	133358786	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8B	440270	broad.mit.edu	37	15	34823994	34823994	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8DP	100132979	broad.mit.edu	37	15	22709206	22709206	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121417151	121417151	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121417151	121417151	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLT1A	127845	broad.mit.edu	37	1	204183019	204183019	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20331155	20331155	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217784228	217784228	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217784228	217784228	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42478467	42478467	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42478467	42478467	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94958404	94958404	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94958404	94958404	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431523	135431523	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431523	135431523	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR113	165082	broad.mit.edu	37	2	26533740	26533740	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR113	165082	broad.mit.edu	37	2	26533740	26533740	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47684541	47684541	+	Splice_Site	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47684541	47684541	+	Splice_Site	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131439264	131439264	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131439264	131439264	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154138855	154138855	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25861687	25861687	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887236	25887236	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25464889	25464889	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25861687	25861687	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25887236	25887236	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR35	2859	broad.mit.edu	37	2	241569594	241569594	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133403100	133403100	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133403100	133403100	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR3	2827	broad.mit.edu	37	1	27720714	27720714	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR3	2827	broad.mit.edu	37	1	27720714	27720714	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR45	11250	broad.mit.edu	37	2	105859435	105859435	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR4	2828	broad.mit.edu	37	19	46094344	46094344	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR4	2828	broad.mit.edu	37	19	46094344	46094344	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR65	8477	broad.mit.edu	37	14	88477258	88477258	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176025235	176025235	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPS1	2873	broad.mit.edu	37	17	80010094	80010094	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX8	493869	broad.mit.edu	37	5	54456044	54456044	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX8	493869	broad.mit.edu	37	5	54456044	54456044	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123481049	123481049	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123481049	123481049	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL2	79977	broad.mit.edu	37	8	102649188	102649188	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105577156	105577156	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87407335	87407335	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87468806	87468806	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	30971253	30971253	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102372431	102372431	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37319301	37319301	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37319301	37319301	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9862550	9862550	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13717013	13717013	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13717313	13717313	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13717013	13717013	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104335781	104335781	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104335781	104335781	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121203352	121203352	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126746810	126746810	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2	2946	broad.mit.edu	37	1	110211845	110211845	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2	2946	broad.mit.edu	37	1	110213870	110213870	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2	2946	broad.mit.edu	37	1	110211845	110211845	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM2	2946	broad.mit.edu	37	1	110213870	110213870	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E2	2961	broad.mit.edu	37	8	30436705	30436705	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E2	2961	broad.mit.edu	37	8	30436705	30436705	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2I	2969	broad.mit.edu	37	7	74131336	74131336	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP1	9567	broad.mit.edu	37	22	39112972	39112972	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP5	26164	broad.mit.edu	37	20	60775750	60775751	+	Missense_Mutation	DNP	CC	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBL2	375513	broad.mit.edu	37	6	58287639	58287639	+	5'UTR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSBL2	375513	broad.mit.edu	37	6	58287639	58287639	+	5'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSB	2990	broad.mit.edu	37	7	65439604	65439604	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSB	2990	broad.mit.edu	37	7	65439604	65439604	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GXYLT2	727936	broad.mit.edu	37	3	73024327	73024327	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPC	2995	broad.mit.edu	37	2	127447982	127447982	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPC	2995	broad.mit.edu	37	2	127447982	127447982	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPE	2996	broad.mit.edu	37	4	144826725	144826725	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMK	3003	broad.mit.edu	37	5	54326505	54326505	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2AFV	94239	broad.mit.edu	37	7	44875224	44875224	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HABP4	22927	broad.mit.edu	37	9	99227767	99227767	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HABP4	22927	broad.mit.edu	37	9	99227767	99227767	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7915094	7915094	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156482498	156482498	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30667605	30667605	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30667605	30667605	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCLS1	3059	broad.mit.edu	37	3	121363643	121363643	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCLS1	3059	broad.mit.edu	37	3	121363643	121363643	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18631183	18631183	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18631290	18631290	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18633708	18633708	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50534774	50534775	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50540459	50540459	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50555455	50555455	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50534774	50534775	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50540459	50540459	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDC	3067	broad.mit.edu	37	15	50555455	50555455	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37299428	37299428	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37299428	37299428	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR6	63897	broad.mit.edu	37	17	58147969	58147969	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41005626	41005626	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43548527	43548527	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197118639	197118639	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197118639	197118639	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197157203	197157203	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELLS	3070	broad.mit.edu	37	10	96334089	96334089	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELQ	113510	broad.mit.edu	37	4	84339310	84339310	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELQ	113510	broad.mit.edu	37	4	84339310	84339310	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92818460	92818460	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63942001	63942001	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28525302	28525302	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91794633	91794633	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGD	3081	broad.mit.edu	37	3	120352002	120352002	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL2	84278	broad.mit.edu	37	9	99717576	99717576	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL2	84278	broad.mit.edu	37	9	99717576	99717576	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF3A	64344	broad.mit.edu	37	19	46815570	46815570	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AA	221613	broad.mit.edu	37	6	25726878	25726878	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AA	221613	broad.mit.edu	37	6	25726878	25726878	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AG	8969	broad.mit.edu	37	6	27101043	27101043	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BI	8346	broad.mit.edu	37	6	26273408	26273408	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BI	8346	broad.mit.edu	37	6	26273408	26273408	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BN	8341	broad.mit.edu	37	6	27806813	27806813	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2AC	8338	broad.mit.edu	37	1	149858701	149858701	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71048521	71048521	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75107651	75107651	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75107651	75107651	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPB1	3115	broad.mit.edu	37	6	33053970	33053970	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-G	3135	broad.mit.edu	37	6	29864644	29864644	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-G	3135	broad.mit.edu	37	6	29864644	29864644	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185815085	185815085	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185953209	185953209	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185815085	185815085	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186014906	186014906	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186156839	186156839	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGN4	10473	broad.mit.edu	37	6	26545530	26545530	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGN4	10473	broad.mit.edu	37	6	26545530	26545530	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA1	3178	broad.mit.edu	37	12	54675174	54675174	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA1	3178	broad.mit.edu	37	12	54675174	54675174	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPD	3184	broad.mit.edu	37	4	83277659	83277659	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPD	3184	broad.mit.edu	37	4	83277659	83277659	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRPLL	92906	broad.mit.edu	37	2	38796436	38796436	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRPLL	92906	broad.mit.edu	37	2	38796436	38796436	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135155	27135155	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA4	3201	broad.mit.edu	37	7	27169157	27169157	+	Missense_Mutation	SNP	C	A	A	rs145032542	byFrequency	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA4	3201	broad.mit.edu	37	7	27169157	27169157	+	Missense_Mutation	SNP	C	A	A	rs145032542	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC13	3229	broad.mit.edu	37	12	54338891	54338891	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC13	3229	broad.mit.edu	37	12	54338891	54338891	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18313334	18313334	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18316688	18316688	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18327658	18327658	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18313029	18313029	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18313334	18313334	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18316688	18316688	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18327041	18327041	+	Splice_Site	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18327658	18327658	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS5	117245	broad.mit.edu	37	11	63235916	63235916	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS5	117245	broad.mit.edu	37	11	63235916	63235916	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11301829	11301829	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH4	59340	broad.mit.edu	37	18	22040786	22040786	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH4	59340	broad.mit.edu	37	18	22040786	22040786	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114598468	114598468	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSCB	150274	broad.mit.edu	37	22	29142081	29142081	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSCB	150274	broad.mit.edu	37	22	29142081	29142081	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119958293	119958293	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF2BP	11077	broad.mit.edu	37	21	45050352	45050352	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFYL1	27437	broad.mit.edu	37	22	17308788	17308788	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4	3308	broad.mit.edu	37	5	132437501	132437501	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4	3308	broad.mit.edu	37	5	132437501	132437501	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA6	3310	broad.mit.edu	37	1	161495729	161495729	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA6	3310	broad.mit.edu	37	1	161495729	161495729	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22180713	22180713	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22211041	22211041	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22211041	22211041	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	113965884	113965884	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113860407	113860407	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3A	3359	broad.mit.edu	37	11	113860407	113860407	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUS1B	135458	broad.mit.edu	37	6	656540	656540	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUS1B	135458	broad.mit.edu	37	6	656540	656540	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71004271	71004271	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95015834	95015834	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICA1L	130026	broad.mit.edu	37	2	203653590	203653590	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI16	3428	broad.mit.edu	37	1	158988421	158988421	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFITM1	8519	broad.mit.edu	37	11	315104	315104	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFITM1	8519	broad.mit.edu	37	11	315104	315104	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27672725	27672725	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27706212	27706212	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT52	51098	broad.mit.edu	37	20	42232377	42232377	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65676637	65676637	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65676637	65676637	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47121244	47121244	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47119761	47119761	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47121244	47121244	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160510217	160510217	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160510217	160510217	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201195334	201195334	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLON5	402665	broad.mit.edu	37	19	51825271	51825271	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLON5	402665	broad.mit.edu	37	19	51825271	51825271	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130409888	130409888	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130420064	130420064	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130409888	130409888	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130420064	130420064	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18736221	18736221	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18735748	18735748	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18736221	18736221	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160063737	160063737	+	Missense_Mutation	SNP	G	A	A	rs149050765		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IHH	3549	broad.mit.edu	37	2	219920102	219920102	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IHH	3549	broad.mit.edu	37	2	219920102	219920102	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKB	3551	broad.mit.edu	37	8	42176906	42176906	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKB	3551	broad.mit.edu	37	8	42176906	42176906	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF2	22807	broad.mit.edu	37	2	213878499	213878499	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF2	22807	broad.mit.edu	37	2	213878499	213878499	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1A	3552	broad.mit.edu	37	2	113539390	113539390	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1A	3552	broad.mit.edu	37	2	113539390	113539390	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F6	27179	broad.mit.edu	37	2	113765398	113765398	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F6	27179	broad.mit.edu	37	2	113765398	113765398	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102642488	102642488	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29973189	29973189	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29973189	29973189	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAP	3556	broad.mit.edu	37	3	190326975	190326975	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAP	3556	broad.mit.edu	37	3	190326975	190326975	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20	50604	broad.mit.edu	37	1	207039433	207039433	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL22RA1	58985	broad.mit.edu	37	1	24469444	24469444	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2	3558	broad.mit.edu	37	4	123372993	123372993	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL32	9235	broad.mit.edu	37	16	3119294	3119294	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27375021	27375021	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILKAP	80895	broad.mit.edu	37	2	239082405	239082405	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	111035084	111035084	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	111161596	111161596	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	111035084	111035084	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	111161596	111161596	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242662728	242662728	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30793439	30793439	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30793439	30793439	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80B	83444	broad.mit.edu	37	2	74682559	74682559	+	Missense_Mutation	SNP	G	T	T	rs115610738	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80B	83444	broad.mit.edu	37	2	74682559	74682559	+	Missense_Mutation	SNP	G	T	T	rs115610738	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143181690	143181690	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143181690	143181690	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71940249	71940249	+	Missense_Mutation	SNP	G	T	T	rs17847214	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156816691	156816691	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1523686	1523686	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62416029	62416029	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128629675	128629675	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPPK	64768	broad.mit.edu	37	9	95420957	95420957	+	Missense_Mutation	SNP	C	T	T	rs148572533		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25414453	25414453	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF9	10379	broad.mit.edu	37	14	24631533	24631533	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF9	10379	broad.mit.edu	37	14	24631533	24631533	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRGM	345611	broad.mit.edu	37	5	150257678	150257678	+	Splice_Site	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227661262	227661262	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977860	107977861	+	Frame_Shift_Ins	INS	-	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977860	107977861	+	Frame_Shift_Ins	INS	-	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISG20	3669	broad.mit.edu	37	15	89198743	89198743	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52177875	52177875	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52374762	52374762	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48156475	48156475	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15760843	15760843	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422674	31422674	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422674	31422674	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3651249	3651249	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3651249	3651249	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30509282	30509282	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30507392	30507392	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73738595	73738595	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20371504	20371504	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156638418	156638418	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156638418	156638418	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160924390	160924390	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160924390	160924390	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26553192	26553192	+	Splice_Site	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26553192	26553192	+	Splice_Site	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR3	3710	broad.mit.edu	37	6	33644514	33644514	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK1	3716	broad.mit.edu	37	1	65321352	65321352	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6050537	6050537	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6050537	6050537	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM2	58494	broad.mit.edu	37	21	27086965	27086965	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM2	58494	broad.mit.edu	37	21	27086965	27086965	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64943192	64943192	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64943192	64943192	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JUP	3728	broad.mit.edu	37	17	39681167	39681167	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124103792	124103792	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124431933	124431933	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124103792	124103792	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124398361	124398361	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124431933	124431933	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62713410	62713410	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD6	89890	broad.mit.edu	37	13	41706012	41706012	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD7	84078	broad.mit.edu	37	13	41767922	41767922	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA2	3737	broad.mit.edu	37	1	111147283	111147283	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA2	3737	broad.mit.edu	37	1	111147283	111147283	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73480521	73480521	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211256397	211256397	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49950939	49950939	+	Intron	SNP	C	G	G	rs150135371	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49950939	49950939	+	Intron	SNP	C	G	G	rs150135371	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP1	30820	broad.mit.edu	37	5	169810916	169810916	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155555776	155555776	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155711162	155711162	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ5	3762	broad.mit.edu	37	11	128786276	128786276	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ6	3763	broad.mit.edu	37	21	39086866	39086866	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ6	3763	broad.mit.edu	37	21	39086866	39086866	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88654186	88654187	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118960610	118960610	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118960610	118960610	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK1	3775	broad.mit.edu	37	1	233802286	233802286	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78651442	78651442	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78651442	78651442	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN4	3783	broad.mit.edu	37	19	44271915	44271915	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18112823	18112823	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18112823	18112823	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36675196	36675196	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36675196	36675196	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110986364	110986364	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110986364	110986364	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD15	79047	broad.mit.edu	37	19	34302540	34302540	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD1	284252	broad.mit.edu	37	18	24035815	24035815	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36454967	36454967	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36454985	36454985	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	122012565	122012565	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10602328	10602328	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10602328	10602328	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS1	10657	broad.mit.edu	37	1	32503611	32503611	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHNYN	23351	broad.mit.edu	37	14	24901483	24901483	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHNYN	23351	broad.mit.edu	37	14	24901483	24901483	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0141	9812	broad.mit.edu	37	5	141318258	141318258	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197408180	197408180	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0247	9766	broad.mit.edu	37	14	70170156	70170156	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0284	283638	broad.mit.edu	37	14	105344718	105344718	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24566722	24566722	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24566722	24566722	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43855628	43855628	+	5'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42293845	42293845	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58988570	58988570	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55355133	55355133	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55355133	55355133	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0776	23376	broad.mit.edu	37	6	96997630	96997631	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0776	23376	broad.mit.edu	37	6	96997630	96997631	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84859425	84859425	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1009	22832	broad.mit.edu	37	6	84859425	84859425	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1012	22878	broad.mit.edu	37	18	29432450	29432450	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1033	23325	broad.mit.edu	37	12	105515907	105515907	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1033	23325	broad.mit.edu	37	12	105515907	105515907	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72289613	72289613	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72289613	72289613	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72292391	72292391	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94083525	94083525	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94083609	94083609	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94083525	94083525	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94083609	94083609	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94103650	94103650	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5743005	5743005	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226273676	226273676	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226273676	226273676	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108273323	108273323	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138595880	138595880	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138595905	138595905	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43488018	43488018	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36870200	36870201	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20929236	20929236	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20929300	20929300	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20770339	20770339	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20929236	20929236	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20929300	20929300	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8888088	8888088	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8888088	8888088	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29018231	29018231	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16348016	16348016	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16359917	16359917	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16348016	16348016	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16359917	16359917	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16362812	16362812	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16408002	16408002	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF17	57576	broad.mit.edu	37	1	21036154	21036154	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18B	146909	broad.mit.edu	37	17	43012664	43012664	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10436463	10436463	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10436463	10436463	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45205402	45205402	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45218724	45218724	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55327927	55327927	+	5'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLB	152831	broad.mit.edu	37	4	39448475	39448475	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLB	152831	broad.mit.edu	37	4	39448475	39448475	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF10	7071	broad.mit.edu	37	8	103664486	103664487	+	Frame_Shift_Del	DEL	TA	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF10	7071	broad.mit.edu	37	8	103664486	103664487	+	Frame_Shift_Del	DEL	TA	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44587911	44587911	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF6	1316	broad.mit.edu	37	10	3822343	3822343	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF6	1316	broad.mit.edu	37	10	3822343	3822343	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC8A	55220	broad.mit.edu	37	1	205307614	205307614	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC8A	55220	broad.mit.edu	37	1	205307614	205307614	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30260213	30260213	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681521	70681521	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70281698	70281698	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70469138	70469138	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70535449	70535449	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681521	70681521	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173703396	173703396	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173703396	173703396	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL28	54813	broad.mit.edu	37	14	45415050	45415050	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL30	377007	broad.mit.edu	37	2	239059471	239059471	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86868907	86868907	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86921526	86921526	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86772825	86772825	+	5'UTR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86868907	86868907	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86921526	86921526	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241731983	241731983	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241755136	241755136	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241731983	241731983	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241755136	241755136	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152733553	152733553	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152733553	152733553	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT23	25984	broad.mit.edu	37	17	39092742	39092742	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT23	25984	broad.mit.edu	37	17	39092742	39092742	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53042001	53042001	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53045355	53045355	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53042001	53042001	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53045355	53045355	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT38	8687	broad.mit.edu	37	17	39595232	39595232	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT73	319101	broad.mit.edu	37	12	53010126	53010126	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT73	319101	broad.mit.edu	37	12	53010126	53010126	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT77	374454	broad.mit.edu	37	12	53088588	53088588	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT77	374454	broad.mit.edu	37	12	53088588	53088588	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT82	3888	broad.mit.edu	37	12	52788852	52788853	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT82	3888	broad.mit.edu	37	12	52788852	52788853	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-11	386678	broad.mit.edu	37	21	46066935	46066935	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-11	386678	broad.mit.edu	37	21	46066935	46066935	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-8	386681	broad.mit.edu	37	21	46032130	46032130	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-8	386681	broad.mit.edu	37	21	46032130	46032130	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31744334	31744334	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31744334	31744334	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31813004	31813004	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31813004	31813004	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-4	85280	broad.mit.edu	37	17	39406231	39406231	+	Missense_Mutation	SNP	G	A	A	rs142016041	byFrequency	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-4	85280	broad.mit.edu	37	17	39406231	39406231	+	Missense_Mutation	SNP	G	A	A	rs142016041	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	117964810	117964810	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7043161	7043161	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129649547	129649547	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129588416	129588416	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129649547	129649547	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112506690	112506690	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112469634	112469634	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60890259	60890259	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL2	55915	broad.mit.edu	37	7	55467800	55467800	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAPTM4A	9741	broad.mit.edu	37	2	20233067	20233067	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARGE	9215	broad.mit.edu	37	22	33673054	33673054	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145537160	145537160	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145537167	145537167	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS1	9113	broad.mit.edu	37	6	149997675	149997675	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3E	353145	broad.mit.edu	37	1	152538337	152538337	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCK	3932	broad.mit.edu	37	1	32739958	32739958	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136570072	136570072	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB1	8861	broad.mit.edu	37	10	103870845	103870845	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB1	8861	broad.mit.edu	37	10	103870845	103870845	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB3	11155	broad.mit.edu	37	10	88446771	88446771	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB3	11155	broad.mit.edu	37	10	88447080	88447080	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB3	11155	broad.mit.edu	37	10	88446771	88446771	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB3	11155	broad.mit.edu	37	10	88447080	88447080	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLR	3949	broad.mit.edu	37	19	11238690	11238691	+	Frame_Shift_Del	DEL	GC	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLR	3949	broad.mit.edu	37	19	11238690	11238691	+	Frame_Shift_Del	DEL	GC	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEAP2	116842	broad.mit.edu	37	5	132209844	132209844	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEAP2	116842	broad.mit.edu	37	5	132209844	132209844	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109086350	109086350	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109086350	109086350	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEKR1	389170	broad.mit.edu	37	3	156647389	156647389	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPREL1	55214	broad.mit.edu	37	3	189705572	189705573	+	Intron	INS	-	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPREL1	55214	broad.mit.edu	37	3	189705572	189705573	+	Intron	INS	-	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9C	654346	broad.mit.edu	37	17	18387103	18387103	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGMN	5641	broad.mit.edu	37	14	93179114	93179114	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71977541	71977541	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71977541	71977541	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX2	9355	broad.mit.edu	37	9	126783309	126783309	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX8	431707	broad.mit.edu	37	1	75609537	75609537	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRP2	79166	broad.mit.edu	37	19	55221963	55221963	+	RNA	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRP2	79166	broad.mit.edu	37	19	55221965	55221965	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN9	286826	broad.mit.edu	37	1	226465686	226465686	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO2	158038	broad.mit.edu	37	9	28150737	28150737	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO2	158038	broad.mit.edu	37	9	27950732	27950732	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO2	158038	broad.mit.edu	37	9	28150737	28150737	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPA	3988	broad.mit.edu	37	10	91005363	91005363	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15558333	15558333	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15535832	15535832	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15558333	15558333	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73567113	73567113	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LLGL2	3993	broad.mit.edu	37	17	73567113	73567113	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD2	442721	broad.mit.edu	37	7	123296081	123296081	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090596	238090596	+	RNA	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238090596	238090596	+	RNA	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150786	150786	broad.mit.edu	37	2	132120596	132120596	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC162632	162632	broad.mit.edu	37	17	16699475	16699475	+	RNA	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC162632	162632	broad.mit.edu	37	17	16699475	16699475	+	RNA	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC255025	255025	broad.mit.edu	37	3	94656773	94656773	+	5'Flank	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178897030	178897030	+	RNA	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178897030	178897030	+	RNA	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49830147	49830147	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644172	644172	broad.mit.edu	37	17	43678244	43678244	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645166	645166	broad.mit.edu	37	1	148944759	148944759	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121306424	121306424	+	5'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75813129	75813129	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75813129	75813129	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146516507	146516507	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP1	9361	broad.mit.edu	37	19	5692223	5692223	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP1	9361	broad.mit.edu	37	19	5692223	5692223	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160959096	160959096	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPGAT1	9926	broad.mit.edu	37	1	211923466	211923466	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82188849	82188849	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82188849	82188849	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62542729	62542729	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62542729	62542729	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99764811	99764811	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR5	163404	broad.mit.edu	37	1	99380293	99380293	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151520208	151520208	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151520208	151520208	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42355849	42355849	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42355849	42355849	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRG1	116844	broad.mit.edu	37	19	4539722	4539722	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141250381	141250381	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141264319	141264319	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141773472	141773472	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57572241	57572242	+	Frame_Shift_Ins	INS	-	G	G	rs139915490		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170002221	170002221	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170112651	170112651	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170002221	170002221	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170112651	170112651	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170134418	170134418	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46895180	46895180	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194080147	194080147	+	Silent	SNP	G	T	T	rs113394891	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194080147	194080147	+	Silent	SNP	G	T	T	rs113394891	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC30	339291	broad.mit.edu	37	18	7231811	7231811	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC30	339291	broad.mit.edu	37	18	7231811	7231811	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC31	79782	broad.mit.edu	37	3	169579498	169579498	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76372111	76372111	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC40	55631	broad.mit.edu	37	1	70639173	70639173	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC43	254050	broad.mit.edu	37	12	122674674	122674674	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC43	254050	broad.mit.edu	37	12	122674674	122674674	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC55	219527	broad.mit.edu	37	11	56949837	56949837	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC55	219527	broad.mit.edu	37	11	56949837	56949837	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52869406	52869406	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52869406	52869406	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70501956	70501956	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRCC1	85444	broad.mit.edu	37	8	86057622	86057622	+	Splice_Site	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238664710	238664710	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238664710	238664710	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP2	9209	broad.mit.edu	37	3	37100214	37100214	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85638753	85638753	+	3'UTR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM5	23658	broad.mit.edu	37	7	32529942	32529942	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33172863	33172863	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6K	54742	broad.mit.edu	37	8	143784660	143784660	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6B	130576	broad.mit.edu	37	2	150071151	150071151	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYSMD2	256586	broad.mit.edu	37	15	52017224	52017224	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYSMD2	256586	broad.mit.edu	37	15	52017224	52017224	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235964166	235964166	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL2	119180	broad.mit.edu	37	10	30918542	30918542	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39752943	39752943	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39752943	39752943	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	13983119	13983119	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	13983119	13983119	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166960580	166960580	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166960580	166960580	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAF	4094	broad.mit.edu	37	16	79633806	79633808	+	5'UTR	DEL	GCC	-	-	rs5818251		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148797297	148797297	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148797297	148797297	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB6	158809	broad.mit.edu	37	X	26212971	26212971	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB6	158809	broad.mit.edu	37	X	26212971	26212971	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995104	140995104	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995104	140995104	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141293131	141293131	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEE2	139599	broad.mit.edu	37	X	75003878	75003878	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35804322	35804322	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65272908	65272908	+	RNA	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML3	55534	broad.mit.edu	37	4	140811064	140811075	+	Splice_Site	DEL	TGCTGCTGCTGC	-	-	rs72203913		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	117948085	117948085	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K4	6416	broad.mit.edu	37	17	12028689	12028689	+	Splice_Site	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K4	6416	broad.mit.edu	37	17	12028689	12028689	+	Splice_Site	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210588470	210588470	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210588470	210588470	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K2	10746	broad.mit.edu	37	2	128066163	128066163	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K8	1326	broad.mit.edu	37	10	30728217	30728218	+	Intron	DEL	CG	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K8	1326	broad.mit.edu	37	10	30728217	30728218	+	Intron	DEL	CG	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K9	4293	broad.mit.edu	37	14	71227747	71227747	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K9	4293	broad.mit.edu	37	14	71227747	71227747	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK7	5598	broad.mit.edu	37	17	19282274	19282274	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK2	9261	broad.mit.edu	37	1	206904867	206904867	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPRE1	22919	broad.mit.edu	37	20	31434628	31434628	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPRE1	22919	broad.mit.edu	37	20	31434628	31434628	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534557	164534557	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534557	164534557	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	165110189	165110189	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217234937	217234937	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH4	57574	broad.mit.edu	37	2	217234937	217234937	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220825366	220825366	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP2	10747	broad.mit.edu	37	1	11087442	11087442	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP2	10747	broad.mit.edu	37	1	11087442	11087442	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12958373	12958373	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAT1A	4143	broad.mit.edu	37	10	82040625	82040625	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAZ	4150	broad.mit.edu	37	16	29819948	29819948	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47802344	47802344	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBL2	4153	broad.mit.edu	37	10	54527720	54527720	+	3'UTR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT1	154141	broad.mit.edu	37	6	20153082	20153082	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART6	401612	broad.mit.edu	37	X	103349497	103349497	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART6	401612	broad.mit.edu	37	X	103349497	103349497	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCC	4163	broad.mit.edu	37	5	112406907	112406907	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCC	4163	broad.mit.edu	37	5	112406907	112406907	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113719264	113719264	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L	23263	broad.mit.edu	37	13	113719264	113719264	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127324020	127324020	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127324020	127324020	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM5	4174	broad.mit.edu	37	22	35804479	35804479	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM5	4174	broad.mit.edu	37	22	35804479	35804479	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37620158	37620158	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37620158	37620158	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME1	4199	broad.mit.edu	37	6	83938469	83938469	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED10	84246	broad.mit.edu	37	5	6378450	6378450	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150881826	150881826	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150906262	150906262	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED30	90390	broad.mit.edu	37	8	118552290	118552290	+	3'UTR	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2D	4209	broad.mit.edu	37	1	156437954	156437954	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3294475	3294475	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3294475	3294475	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46766762	46766762	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46766762	46766762	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL13	51603	broad.mit.edu	37	1	171756899	171756899	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2A	339175	broad.mit.edu	37	17	60501734	60501734	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3B	84206	broad.mit.edu	37	15	82336941	82336941	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3B	84206	broad.mit.edu	37	15	82336941	82336941	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFGE8	4240	broad.mit.edu	37	15	89449995	89449995	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFGE8	4240	broad.mit.edu	37	15	89449995	89449995	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFN1	55669	broad.mit.edu	37	3	179085375	179085375	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD11	79157	broad.mit.edu	37	17	74740468	74740468	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD8	256471	broad.mit.edu	37	4	128843023	128843023	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD8	256471	broad.mit.edu	37	4	128843023	128843023	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT3	4248	broad.mit.edu	37	22	39884738	39884738	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT3	4248	broad.mit.edu	37	22	39884738	39884738	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43232316	43232316	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43232316	43232316	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222837527	222837527	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB1	57534	broad.mit.edu	37	18	19359454	19359454	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB2	142678	broad.mit.edu	37	1	1565853	1565853	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIP	4284	broad.mit.edu	37	12	56847965	56847965	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1237	100302280	broad.mit.edu	37	11	64136087	64136087	+	RNA	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR30E	407034	broad.mit.edu	37	1	41220029	41220029	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR30E	407034	broad.mit.edu	37	1	41220029	41220029	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR508	574513	broad.mit.edu	37	X	146318520	146318520	+	RNA	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR508	574513	broad.mit.edu	37	X	146318520	146318520	+	RNA	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR888	100126306	broad.mit.edu	37	X	145076303	145076303	+	RNA	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR9-3	407051	broad.mit.edu	37	15	89911264	89911264	+	RNA	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129903116	129903116	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129903116	129903116	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKRN2	23609	broad.mit.edu	37	3	12623348	12623349	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKRN2	23609	broad.mit.edu	37	3	12623348	12623349	+	Frame_Shift_Ins	INS	-	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49435132	49435132	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151935713	151935713	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945082	151945082	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151970712	151970712	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	152006997	152006997	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36865410	36865410	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36871817	36871817	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36865410	36865410	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36871817	36871817	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118362018	118362018	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMAB	326625	broad.mit.edu	37	12	110003027	110003027	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2535350	2535350	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2535350	2535350	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154864837	154864837	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89131063	89131063	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89339533	89339533	+	5'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89131063	89131063	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89339533	89339533	+	5'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP27	64066	broad.mit.edu	37	11	102565921	102565921	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55525623	55525623	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNAT1	4331	broad.mit.edu	37	14	61201638	61201638	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158811925	158811925	+	5'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158812890	158812890	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBKL2B	79817	broad.mit.edu	37	9	27358836	27358836	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBKL2B	79817	broad.mit.edu	37	9	27358836	27358836	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBKL3	25843	broad.mit.edu	37	2	198400314	198400314	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBKL3	25843	broad.mit.edu	37	2	198400314	198400314	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS1	4337	broad.mit.edu	37	6	39880459	39880459	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108776168	108776168	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108778673	108778673	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108746546	108746546	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108776168	108776168	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC1	27136	broad.mit.edu	37	3	108778673	108778673	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPL	4352	broad.mit.edu	37	1	43805992	43805992	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17039274	17039274	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRE11A	4361	broad.mit.edu	37	11	94219072	94219072	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL11	65003	broad.mit.edu	37	11	66204422	66204422	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156708444	156708445	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL45	84311	broad.mit.edu	37	17	36453205	36453205	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL45	84311	broad.mit.edu	37	17	36453205	36453205	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS30	10884	broad.mit.edu	37	5	44811251	44811251	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS5	64969	broad.mit.edu	37	2	95756262	95756262	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS5	64969	broad.mit.edu	37	2	95756262	95756262	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125084970	125084970	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125084970	125084970	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRVI1	10335	broad.mit.edu	37	11	10649326	10649326	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47739384	47739384	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47739384	47739384	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76343962	76343962	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76349447	76349447	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76343962	76343962	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76349447	76349447	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1F	4494	broad.mit.edu	37	16	56692051	56692051	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1F	4494	broad.mit.edu	37	16	56692051	56692051	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1G	4495	broad.mit.edu	37	16	56701981	56701981	+	5'Flank	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF2	22823	broad.mit.edu	37	1	93576079	93576079	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151256055	151256055	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151256055	151256055	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTL5	9633	broad.mit.edu	37	11	68478241	68478241	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR3	8897	broad.mit.edu	37	22	30387727	30387727	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714702	92714702	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92715222	92715222	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714702	92714702	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92715222	92715222	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11297963	11297963	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11297963	11297963	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236975957	236975957	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236975957	236975957	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29600034	29600034	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8982214	8982214	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9072073	9072073	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8982214	8982214	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024310	9024310	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9072073	9072073	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195488599	195488599	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1155221	1155221	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1263316	1263316	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271377	1271377	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1271377	1271377	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1024787	1024787	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1025314	1025314	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1033117	1033117	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1033117	1033117	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBBP1A	10514	broad.mit.edu	37	17	4442216	4442216	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBBP1A	10514	broad.mit.edu	37	17	4442216	4442216	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42331555	42331555	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42344533	42344533	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102060588	102060588	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102060588	102060588	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC2	4606	broad.mit.edu	37	19	50945490	50945490	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC2	4606	broad.mit.edu	37	19	50945490	50945490	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47364314	47364314	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47367838	47367838	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47364314	47364314	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77695684	77695684	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77765894	77765894	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77695684	77695684	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77765894	77765894	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77780735	77780735	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50785111	50785111	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108112808	108112808	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108117749	108117749	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108175759	108175759	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10417529	10417529	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10367852	10367852	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10361031	10361031	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10367852	10367852	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23854991	23854991	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23855953	23855953	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33572642	33572642	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL10	93408	broad.mit.edu	37	7	101265499	101265499	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL10	93408	broad.mit.edu	37	7	101265499	101265499	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL1	4632	broad.mit.edu	37	2	211155675	211155675	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL7	58498	broad.mit.edu	37	7	44180391	44180391	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLIP	29116	broad.mit.edu	37	6	16143378	16143378	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK3	91807	broad.mit.edu	37	16	46763484	46763484	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK3	91807	broad.mit.edu	37	16	46763484	46763484	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109859232	109859232	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27441092	27441092	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26242238	26242238	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26242238	26242238	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192280722	192280722	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171225958	171225958	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171225958	171225958	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171375965	171375965	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95139809	95139809	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2027039	2027039	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2027039	2027039	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24401952	24401952	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41834584	41834584	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41834584	41834584	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40099000	40099000	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40099000	40099000	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30257706	30257706	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41892886	41892886	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41929421	41929421	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA16	79612	broad.mit.edu	37	13	41929421	41929421	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA20	51126	broad.mit.edu	37	20	19998524	19998524	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL1	10004	broad.mit.edu	37	11	64815843	64815843	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL1	10004	broad.mit.edu	37	11	64815843	64815843	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGLU	4669	broad.mit.edu	37	17	40685603	40685603	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101747914	101747914	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101747914	101747914	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92927019	92927019	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L3	4675	broad.mit.edu	37	X	92927019	92927019	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPB	63908	broad.mit.edu	37	20	23375833	23375833	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPB	63908	broad.mit.edu	37	20	23375833	23375833	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NASP	4678	broad.mit.edu	37	1	46083319	46083319	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78400307	78400307	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78400665	78400665	+	Frame_Shift_Del	DEL	A	-	-	rs35015855		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78574751	78574751	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78400307	78400307	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78400665	78400665	+	Frame_Shift_Del	DEL	A	-	-	rs35015855		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78574751	78574751	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL2	23218	broad.mit.edu	37	3	47038418	47038418	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35624523	35624523	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36046755	36046755	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36241513	36241513	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16902746	16902746	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113103046	113103046	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134093889	134093889	+	5'UTR	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCEH1	57552	broad.mit.edu	37	3	172351224	172351224	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF1B	654816	broad.mit.edu	37	7	72643792	72643792	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCK2	8440	broad.mit.edu	37	2	106498084	106498084	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54912725	54912725	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183850996	183850996	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183841674	183841674	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183850996	183850996	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24920559	24920559	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24920559	24920559	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33328826	33328826	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33328826	33328826	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75563577	75563577	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75565368	75565368	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75566383	75566383	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119114645	119114645	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115750957	115750957	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115769466	115769466	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115898492	115898492	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115750957	115750957	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115769466	115769466	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS7	374291	broad.mit.edu	37	19	1391229	1391229	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS8	4728	broad.mit.edu	37	11	67800450	67800450	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS8	4728	broad.mit.edu	37	11	67800450	67800450	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152432198	152432198	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152432198	152432198	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152541404	152541404	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11185641	11185641	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11185641	11185641	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72740529	72740529	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797324	52797324	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797324	52797324	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK9	91754	broad.mit.edu	37	14	75563845	75563845	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45004705	45004705	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	45004705	45004705	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD6	63974	broad.mit.edu	37	7	31378209	31378209	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD6	63974	broad.mit.edu	37	7	31378209	31378209	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROG2	63973	broad.mit.edu	37	4	113436310	113436310	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROG2	63973	broad.mit.edu	37	4	113436310	113436310	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROG3	50674	broad.mit.edu	37	10	71332433	71332433	+	Missense_Mutation	SNP	C	G	G	rs140128333		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29559581	29559581	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIX	4784	broad.mit.edu	37	19	13201252	13201252	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIZ	64332	broad.mit.edu	37	3	101571650	101571650	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129762497	129762497	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129762497	129762497	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFX1	4799	broad.mit.edu	37	9	33313608	33313608	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGDN	25983	broad.mit.edu	37	14	23945466	23945466	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEJ1	79840	broad.mit.edu	37	2	219942919	219942919	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEJ1	79840	broad.mit.edu	37	2	219942919	219942919	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236195689	236195689	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236195689	236195689	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25493374	25493374	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25493374	25493374	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN1	79570	broad.mit.edu	37	1	31655571	31655571	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124676442	124676442	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124676442	124676442	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKTR	4820	broad.mit.edu	37	3	42680905	42680905	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX2-5	1482	broad.mit.edu	37	5	172659655	172659655	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173998896	173998896	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173998896	173998896	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57062312	57062312	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57062312	57062312	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7092473	7092473	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP1	22861	broad.mit.edu	37	17	5487022	5487022	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247599347	247599347	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56382250	56382250	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56382250	56382250	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56544115	56544115	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56544115	56544115	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56465808	56465808	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56465808	56465808	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169272364	169272364	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMS	129521	broad.mit.edu	37	2	101097043	101097043	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15210517	15210517	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC4L	79050	broad.mit.edu	37	12	132631995	132631995	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14958619	14958619	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14989989	14989989	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO2	283820	broad.mit.edu	37	16	18542752	18542752	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO3	408050	broad.mit.edu	37	16	16364120	16364120	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117660523	117660523	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117660523	117660523	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26094815	26094815	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26094707	26094707	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26094815	26094815	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150697444	150697444	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	26917884	26917884	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA1	4857	broad.mit.edu	37	14	26941598	26941598	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOVA2	4858	broad.mit.edu	37	19	46443465	46443465	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100118019	100118019	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX1	27035	broad.mit.edu	37	X	100118019	100118019	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89184980	89184980	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS3	64067	broad.mit.edu	37	14	34269356	34269356	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108064653	108064653	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108064653	108064653	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132431946	132431946	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34791015	34791015	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34889224	34889224	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34791015	34791015	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34889224	34889224	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTX1	4884	broad.mit.edu	37	17	78447417	78447417	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156136166	156136166	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156136166	156136166	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100934574	100934574	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100957082	100957082	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100934574	100934574	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H4	9971	broad.mit.edu	37	12	100957082	100957082	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502082	108502082	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502647	108502647	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502082	108502082	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502647	108502647	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2F1	7025	broad.mit.edu	37	5	92929580	92929580	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A1	3164	broad.mit.edu	37	12	52448768	52448768	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A1	3164	broad.mit.edu	37	12	52448768	52448768	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115391514	115391514	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107816974	107816974	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107820956	107820956	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107850079	107850079	+	Intron	SNP	A	T	T	rs34741953		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107816974	107816974	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107850079	107850079	+	Intron	SNP	A	T	T	rs34741953		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107878291	107878291	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129357178	129357178	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129357178	129357178	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206607987	206607987	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	51255156	51255157	+	Frame_Shift_Del	DEL	CG	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64374937	64374937	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSFL1C	55968	broad.mit.edu	37	20	1424459	1424459	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSFL1C	55968	broad.mit.edu	37	20	1424459	1424459	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSFL1C	55968	broad.mit.edu	37	20	1433842	1433842	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSL1	25936	broad.mit.edu	37	1	212955342	212955342	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMAF	8439	broad.mit.edu	37	8	59515722	59515722	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18765288	18765288	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18765288	18765288	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9124658	9124658	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87342555	87342555	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87342555	87342555	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88522572	88522572	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88522572	88522572	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTSR1	4923	broad.mit.edu	37	20	61386225	61386225	+	Silent	SNP	C	A	A	rs34864360	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTSR1	4923	broad.mit.edu	37	20	61386117	61386117	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCKS1	64710	broad.mit.edu	37	1	205696877	205696877	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110305589	110305589	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT1	4521	broad.mit.edu	37	7	2290724	2290724	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT3	11165	broad.mit.edu	37	6	34263448	34263448	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT3	11165	broad.mit.edu	37	6	34263448	34263448	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37364146	37364146	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37364146	37364146	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154067433	154067433	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134022940	134022940	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3774423	3774423	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3789741	3789741	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224491581	224491581	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101803061	101803061	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101803061	101803061	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101818873	101818873	+	RNA	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXNL2	158046	broad.mit.edu	37	9	91150685	91150685	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS3	4940	broad.mit.edu	37	12	113400363	113400363	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAT	4942	broad.mit.edu	37	10	126091385	126091385	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBFC2B	79035	broad.mit.edu	37	12	56619478	56619478	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2A	29991	broad.mit.edu	37	9	138439695	138439695	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2A	29991	broad.mit.edu	37	9	138439695	138439695	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228559464	228559464	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133037061	133037061	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123556156	123556156	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123556156	123556156	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78412823	78412823	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78412823	78412823	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OFD1	8481	broad.mit.edu	37	X	13753126	13753126	+	5'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50943156	50943156	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74660219	74660219	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLAH	55301	broad.mit.edu	37	10	15103747	15103747	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLAH	55301	broad.mit.edu	37	10	15103747	15103747	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193364866	193364866	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193364866	193364866	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPLAH	26873	broad.mit.edu	37	8	145108219	145108219	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A4	283297	broad.mit.edu	37	11	6897968	6897968	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A7	121364	broad.mit.edu	37	12	55615275	55615275	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10AG1	282770	broad.mit.edu	37	11	55735197	55735197	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G2	26534	broad.mit.edu	37	14	22102531	22102531	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57995949	57995949	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57995949	57995949	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C3	138803	broad.mit.edu	37	9	107298654	107298654	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C3	138803	broad.mit.edu	37	9	107298654	107298654	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247836167	247836167	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247835786	247835786	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13G1	441933	broad.mit.edu	37	1	247836167	247836167	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L4	254973	broad.mit.edu	37	9	125486593	125486593	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L4	254973	broad.mit.edu	37	9	125486593	125486593	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N2	138882	broad.mit.edu	37	9	125315507	125315507	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695646	247695646	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695646	247695646	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343411	248343411	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343411	248343411	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T27	403239	broad.mit.edu	37	1	248813783	248813783	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T27	403239	broad.mit.edu	37	1	248813783	248813783	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436952	248436952	+	Silent	SNP	C	G	G	rs149193117		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737412	248737412	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737412	248737412	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T3	343173	broad.mit.edu	37	1	248636502	248636502	+	5'Flank	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551236	248551236	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180581966	180581966	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180582654	180582654	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180581966	180581966	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180582444	180582444	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180582654	180582654	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059305	248059305	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059305	248059305	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W5	441932	broad.mit.edu	37	1	247654775	247654775	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W5	441932	broad.mit.edu	37	1	247654775	247654775	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2Y1	134083	broad.mit.edu	37	5	180166157	180166157	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4E2	26686	broad.mit.edu	37	14	22133522	22133522	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K14	122740	broad.mit.edu	37	14	20482537	20482537	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22369243	22369243	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22369243	22369243	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4S2	219431	broad.mit.edu	37	11	55418972	55418972	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4S2	219431	broad.mit.edu	37	11	55418972	55418972	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4X2	119764	broad.mit.edu	37	11	48266603	48266603	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4X2	119764	broad.mit.edu	37	11	48266603	48266603	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B6	390058	broad.mit.edu	37	11	5373536	5373536	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B6	390058	broad.mit.edu	37	11	5373536	5373536	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E1	143503	broad.mit.edu	37	11	4674254	4674254	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E1	143503	broad.mit.edu	37	11	4674254	4674254	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G2	81282	broad.mit.edu	37	11	4936270	4936270	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G2	81282	broad.mit.edu	37	11	4936270	4936270	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5411244	5411244	+	Frame_Shift_Del	DEL	T	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6007293	6007293	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6007353	6007353	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6007293	6007293	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52L1	338751	broad.mit.edu	37	11	6007353	6007353	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A4	120793	broad.mit.edu	37	11	6024418	6024418	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56B4	196335	broad.mit.edu	37	11	6129473	6129473	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56B4	196335	broad.mit.edu	37	11	6129473	6129473	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275103	58275103	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275540	58275540	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275103	58275103	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275540	58275540	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H14	403273	broad.mit.edu	37	3	97868843	97868843	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703085	55703085	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M11	219487	broad.mit.edu	37	11	56310672	56310672	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M1	390168	broad.mit.edu	37	11	56380893	56380893	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M1	390168	broad.mit.edu	37	11	56380893	56380893	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5W2	390148	broad.mit.edu	37	11	55681456	55681456	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5W2	390148	broad.mit.edu	37	11	55681456	55681456	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C2	341416	broad.mit.edu	37	12	55846499	55846499	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C2	341416	broad.mit.edu	37	12	55846499	55846499	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C4	341418	broad.mit.edu	37	12	55945160	55945160	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C4	341418	broad.mit.edu	37	12	55945160	55945160	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C65	403282	broad.mit.edu	37	12	55794773	55794773	+	Frame_Shift_Del	DEL	T	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6F1	343169	broad.mit.edu	37	1	247875710	247875710	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687653	158687653	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6P1	128366	broad.mit.edu	37	1	158532818	158532818	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B4	283162	broad.mit.edu	37	11	124294222	124294222	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55889783	55889783	+	5'Flank	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55523797	55523797	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55523797	55523797	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL11	114885	broad.mit.edu	37	3	125286264	125286264	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL11	114885	broad.mit.edu	37	3	125286264	125286264	+	Nonsense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21747290	21747290	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24911677	24911677	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24911677	24911677	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179209051	179209051	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179209051	179209051	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76786602	76786602	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76793690	76793690	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59377827	59377828	+	Intron	DNP	CC	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59377827	59377828	+	Intron	DNP	CC	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21698923	21698923	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4199621	4199621	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4199621	4199621	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4228274	4228282	+	In_Frame_Del	DEL	CCACAGCAG	-	-	rs111245977		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH2	341277	broad.mit.edu	37	11	7718157	7718157	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41739745	41739745	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41801115	41801115	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25671037	25671037	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65983533	65983533	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65983533	65983533	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65988746	65988746	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI2	11240	broad.mit.edu	37	1	17431488	17431488	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI2	11240	broad.mit.edu	37	1	17431488	17431488	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17592143	17592143	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17592143	17592143	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2B	389860	broad.mit.edu	37	X	55102690	55102690	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE2B	389860	broad.mit.edu	37	X	55102690	55102690	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK4	55229	broad.mit.edu	37	1	2451331	2451331	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX3	116337	broad.mit.edu	37	11	124482851	124482851	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX3	116337	broad.mit.edu	37	11	124482851	124482851	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPL	390928	broad.mit.edu	37	19	39576129	39576139	+	Intron	DEL	GGGTGGCTCAT	-	-	rs139016860	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176809429	176809430	+	Intron	INS	-	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108576016	108576016	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108576016	108576016	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25457213	25457213	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25458929	25458929	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25458929	25458929	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206058070	206058070	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP12	64761	broad.mit.edu	37	7	139756470	139756470	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50055592	50055592	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44583834	44583834	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATZ1	23598	broad.mit.edu	37	22	31722972	31722972	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAWR	5074	broad.mit.edu	37	12	80015034	80015034	+	Intron	SNP	T	A	A	rs2307224		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAWR	5074	broad.mit.edu	37	12	80015034	80015034	+	Intron	SNP	T	A	A	rs2307224		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102506214	102506214	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX2	5076	broad.mit.edu	37	10	102509593	102509593	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223084905	223084905	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX4	5078	broad.mit.edu	37	7	127254020	127254020	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072994	134072994	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072994	134072994	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91237674	91237674	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55892844	55892844	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55570513	55570513	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55626693	55626693	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55892844	55892844	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56128900	56128900	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56288110	56288110	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56360534	56360534	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH1	5097	broad.mit.edu	37	5	141233739	141233739	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH20	64881	broad.mit.edu	37	13	61989281	61989281	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140174546	140174546	+	5'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140176995	140176995	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140174546	140174546	+	5'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA4	56144	broad.mit.edu	37	5	140189081	140189081	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA4	56144	broad.mit.edu	37	5	140189081	140189081	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140308879	140308879	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140308879	140308879	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140501728	140501728	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140515957	140515957	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140516601	140516601	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140515957	140515957	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB6	56130	broad.mit.edu	37	5	140530479	140530479	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB6	56130	broad.mit.edu	37	5	140530479	140530479	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140558439	140558439	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140558439	140558439	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140811320	140811320	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140811320	140811320	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140754809	140754809	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA7	56108	broad.mit.edu	37	5	140762481	140762481	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB3	56102	broad.mit.edu	37	5	140751805	140751805	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB6	56100	broad.mit.edu	37	5	140788971	140788971	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB6	56100	broad.mit.edu	37	5	140788971	140788971	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB6	56100	broad.mit.edu	37	5	140789165	140789165	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC4	56098	broad.mit.edu	37	5	140864842	140864842	+	Silent	SNP	G	T	T	rs77402299		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113838759	113838759	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113838759	113838759	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56138681	56138681	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56138681	56138681	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56140121	56140121	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCM1	5108	broad.mit.edu	37	8	17794929	17794929	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK2	5126	broad.mit.edu	37	20	17446140	17446140	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK4	54760	broad.mit.edu	37	19	1483437	1483437	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK4	54760	broad.mit.edu	37	19	1483627	1483627	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK4	54760	broad.mit.edu	37	19	1483437	1483437	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYOX1L	78991	broad.mit.edu	37	5	148743793	148743793	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYOX1L	78991	broad.mit.edu	37	5	148743793	148743793	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1A	5130	broad.mit.edu	37	3	195975230	195975230	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1A	5130	broad.mit.edu	37	3	195975241	195975241	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165895713	165895713	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165895713	165895713	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31793152	31793152	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31867783	31867783	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31877577	31877577	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31793152	31793152	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31867770	31867770	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31867783	31867783	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31877577	31877577	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20522956	20522956	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20705006	20705006	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20522956	20522956	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20705006	20705006	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20774219	20774219	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144852633	144852634	+	Intron	DEL	AA	-	-	rs10565305		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854175	144854175	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144922676	144922676	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144923746	144923746	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149286809	149286809	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149274852	149274852	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149286809	149286809	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95399999	95399999	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95399999	95399999	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE7A	5150	broad.mit.edu	37	8	66631465	66631465	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE7B	27115	broad.mit.edu	37	6	136512860	136512860	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE7B	27115	broad.mit.edu	37	6	136512860	136512860	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5A	23244	broad.mit.edu	37	4	39870874	39870874	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD7	79955	broad.mit.edu	37	10	102780323	102780323	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119043108	119043108	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119043108	119043108	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57330170	57330170	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57330170	57330170	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI1	57162	broad.mit.edu	37	2	64321776	64321776	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5	5830	broad.mit.edu	37	12	7342955	7342955	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5	5830	broad.mit.edu	37	12	7342955	7342955	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFDN1	5201	broad.mit.edu	37	5	139682726	139682726	+	5'Flank	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFDN1	5201	broad.mit.edu	37	5	139682726	139682726	+	5'Flank	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD2	267002	broad.mit.edu	37	1	249208012	249208012	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD2	267002	broad.mit.edu	37	1	249210873	249210873	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGCP	10404	broad.mit.edu	37	8	97847500	97847500	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754596	49754596	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754596	49754596	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP4	57115	broad.mit.edu	37	1	153303170	153303170	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP4	57115	broad.mit.edu	37	1	153303170	153303170	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGS1	9489	broad.mit.edu	37	17	76415832	76415832	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58318417	58318417	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58318417	58318417	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF12	57649	broad.mit.edu	37	17	27234114	27234114	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11022767	11022767	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79672700	79672700	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA1	5255	broad.mit.edu	37	X	71800926	71800926	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA1	5255	broad.mit.edu	37	X	71800926	71800926	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18942678	18942678	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18942678	18942678	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18970786	18970786	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111603514	111603514	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB3	653583	broad.mit.edu	37	19	44006403	44006403	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60384516	60384516	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151266850	151266850	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151266850	151266850	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICALM	8301	broad.mit.edu	37	11	85733350	85733351	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	230020567	230020567	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PID1	55022	broad.mit.edu	37	2	230020567	230020567	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGT	51604	broad.mit.edu	37	20	44054330	44054330	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGZ	80235	broad.mit.edu	37	3	196675122	196675122	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18499547	18499547	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2G	5288	broad.mit.edu	37	12	18499547	18499547	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209218694	209218694	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209218694	209218694	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123485803	123485803	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL4	143689	broad.mit.edu	37	11	94330994	94330994	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL4	143689	broad.mit.edu	37	11	94330994	94330994	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PJA2	9867	broad.mit.edu	37	5	108714382	108714382	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PJA2	9867	broad.mit.edu	37	5	108714382	108714382	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47882629	47882629	+	Silent	SNP	C	A	A	rs148252365		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47882629	47882629	+	Silent	SNP	C	A	A	rs148252365		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2164413	2164413	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102052901	102052901	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102052901	102052901	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110412245	110412245	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110457536	110457536	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110397826	110397826	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110412245	110412245	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110441606	110441606	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110457536	110457536	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110487547	110487547	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110516641	110516641	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKN2	5586	broad.mit.edu	37	1	89294166	89294166	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G10	8399	broad.mit.edu	37	16	14766512	14766512	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G15	23659	broad.mit.edu	37	16	68289811	68289811	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48578088	48578088	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48578088	48578088	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42363779	42363779	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42363779	42363779	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL2	5326	broad.mit.edu	37	20	30784777	30784777	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL2	5326	broad.mit.edu	37	20	30784777	30784777	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8689501	8689501	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8745806	8745806	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81944011	81944011	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155215184	155215184	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155215184	155215184	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198953721	198953721	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198953721	198953721	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL2	23228	broad.mit.edu	37	3	17053070	17053070	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41381966	41381966	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171395480	171395480	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA4	57664	broad.mit.edu	37	19	49340593	49340593	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA4	57664	broad.mit.edu	37	19	49357336	49357336	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204228926	204228926	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204228926	204228926	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132110013	132110013	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131949262	131949262	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132110013	132110013	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39914254	39914254	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG7	440107	broad.mit.edu	37	12	93163941	93163941	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHM1P	440456	broad.mit.edu	37	17	62796435	62796436	+	Missense_Mutation	DNP	CC	GA	GA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK2	10769	broad.mit.edu	37	5	57751638	57751638	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP1	5354	broad.mit.edu	37	X	103045510	103045510	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLS1	5357	broad.mit.edu	37	3	142388273	142388273	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126749363	126749363	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208390760	208390760	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129290609	129290610	+	Missense_Mutation	DNP	CT	AC	AC			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PM20D1	148811	broad.mit.edu	37	1	205811919	205811919	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMP2	5375	broad.mit.edu	37	8	82356864	82356864	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50367697	50367697	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50367697	50367697	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50368512	50368512	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50369651	50369651	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118220677	118220677	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118314892	118314892	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA8	50640	broad.mit.edu	37	7	108151194	108151194	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121192174	121192174	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121192174	121192174	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1E	64425	broad.mit.edu	37	9	37486630	37486630	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1E	64425	broad.mit.edu	37	9	37486630	37486630	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2D	5433	broad.mit.edu	37	2	128610524	128610524	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106848433	106848433	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106848433	106848433	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103547	53103547	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103731	53103731	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103547	53103547	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53103731	53103731	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121	9883	broad.mit.edu	37	7	72409924	72409924	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121	9883	broad.mit.edu	37	7	72409924	72409924	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMGNT1	55624	broad.mit.edu	37	1	46668970	46668970	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMGNT1	55624	broad.mit.edu	37	1	46656017	46656017	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99142459	99142459	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124499043	124499043	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14542523	14542523	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F2	5452	broad.mit.edu	37	19	42621437	42621437	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F2	5452	broad.mit.edu	37	19	42621437	42621437	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122263423	122263423	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122263423	122263423	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1B	133522	broad.mit.edu	37	5	149214842	149214842	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1B	133522	broad.mit.edu	37	5	149214842	149214842	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARG	5468	broad.mit.edu	37	3	12475259	12475259	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57261427	57261427	+	3'UTR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57261580	57261580	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81688596	81688596	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA3	8541	broad.mit.edu	37	19	49646213	49646225	+	Frame_Shift_Del	DEL	GGAGATGGTCTCG	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA3	8541	broad.mit.edu	37	19	49646213	49646225	+	Frame_Shift_Del	DEL	GGAGATGGTCTCG	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1F	9647	broad.mit.edu	37	22	22280013	22280013	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1K	152926	broad.mit.edu	37	4	89189312	89189312	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1K	152926	broad.mit.edu	37	4	89189312	89189312	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1N	147699	broad.mit.edu	37	19	46003650	46003650	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37546891	37546891	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37546891	37546891	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242102981	242102981	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52719320	52719320	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52719320	52719320	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1B	5519	broad.mit.edu	37	11	111608384	111608384	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146086144	146086144	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPTC7	160760	broad.mit.edu	37	12	110977723	110977723	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQBP1	10084	broad.mit.edu	37	X	48758546	48758546	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQBP1	10084	broad.mit.edu	37	X	48758546	48758546	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAME	23532	broad.mit.edu	37	22	22892257	22892257	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3328985	3328985	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3328985	3328985	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM4	11108	broad.mit.edu	37	12	108134944	108134944	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121738051	121738051	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121738051	121738051	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23518120	23518120	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23524371	23524371	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203455883	203455883	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203455883	203455883	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG3	10394	broad.mit.edu	37	11	57146356	57146356	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG3	10394	broad.mit.edu	37	11	57146356	57146356	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186275424	186275424	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186275424	186275424	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG3	53632	broad.mit.edu	37	2	219693170	219693170	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	23848711	23848711	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54403931	54403931	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCI	5584	broad.mit.edu	37	3	170016870	170016870	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD2	25865	broad.mit.edu	37	19	47193890	47193890	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48802802	48802802	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG1	5592	broad.mit.edu	37	10	54032266	54032266	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT10	90826	broad.mit.edu	37	4	148582162	148582162	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3686260	3686260	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRNP	5621	broad.mit.edu	37	20	4680383	4680383	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRODH2	58510	broad.mit.edu	37	19	36297252	36297252	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRODH2	58510	broad.mit.edu	37	19	36297252	36297252	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93646105	93646105	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF6	24148	broad.mit.edu	37	20	62648234	62648234	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPH	5630	broad.mit.edu	37	12	49691390	49691390	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142460350	142460350	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142460350	142460350	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS48	345062	broad.mit.edu	37	4	152200847	152200847	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSAP	5660	broad.mit.edu	37	10	73581799	73581799	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD4	23550	broad.mit.edu	37	2	113955199	113955199	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD4	23550	broad.mit.edu	37	2	113955199	113955199	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG11	5680	broad.mit.edu	37	19	43530537	43530537	+	Translation_Start_Site	SNP	G	A	A	rs1064913		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG11	5680	broad.mit.edu	37	19	43530537	43530537	+	Translation_Start_Site	SNP	G	A	A	rs1064913		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43371807	43371807	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43371807	43371807	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG2	5670	broad.mit.edu	37	19	43576091	43576092	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG2	5670	broad.mit.edu	37	19	43576091	43576092	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43593578	43593579	+	Intron	DNP	GG	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43593578	43593579	+	Intron	DNP	GG	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43757685	43757685	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH2	85481	broad.mit.edu	37	8	87081589	87081589	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA1	5682	broad.mit.edu	37	11	14632472	14632472	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB3	5691	broad.mit.edu	37	17	36909033	36909033	+	5'UTR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC5	5705	broad.mit.edu	37	17	61909386	61909386	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD4	5710	broad.mit.edu	37	1	151237634	151237634	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME3	10197	broad.mit.edu	37	17	40991212	40991213	+	Intron	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54161583	54161583	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH1	5727	broad.mit.edu	37	9	98242849	98242849	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH1	5727	broad.mit.edu	37	9	98242849	98242849	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER2	5732	broad.mit.edu	37	14	52781297	52781297	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117491979	117491979	+	Missense_Mutation	SNP	G	T	T	rs149030409		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117491979	117491979	+	Missense_Mutation	SNP	G	T	T	rs149030409		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTOV1	53635	broad.mit.edu	37	19	50360333	50360333	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTOV1	53635	broad.mit.edu	37	19	50360333	50360333	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214551349	214551349	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214557780	214557780	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214551349	214551349	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214557780	214557780	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120712936	120712936	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	2985552	2985552	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3003289	3003289	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3003289	3003289	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70928575	70928575	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198648231	198648231	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198673790	198673790	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198697465	198697465	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8483972	8483972	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8713579	8713579	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62258745	62258745	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8143827	8143827	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8143827	8143827	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220164233	220164233	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220162888	220162888	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71094993	71094993	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40746991	40746991	+	Intron	SNP	C	T	T	rs112112054		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41306453	41306453	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29609316	29609316	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29609316	29609316	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121638051	121638051	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121638051	121638051	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121676607	121676607	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31425212	31425212	+	Splice_Site	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31425212	31425212	+	Splice_Site	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52370004	52370004	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52370004	52370004	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1639197	1639197	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1639197	1639197	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64518939	64518939	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64518939	64518939	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYROXD2	84795	broad.mit.edu	37	10	100152098	100152098	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYROXD2	84795	broad.mit.edu	37	10	100152098	100152098	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYROXD2	84795	broad.mit.edu	37	10	100152726	100152726	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9308883	9308883	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9356284	9356284	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QDPR	5860	broad.mit.edu	37	4	17492487	17492487	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74303406	74303406	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113798632	113798632	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113798632	113798632	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113798781	113798781	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDML	140902	broad.mit.edu	37	20	42974026	42974027	+	Intron	DNP	CC	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDML	140902	broad.mit.edu	37	20	42974026	42974027	+	Intron	DNP	CC	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB31	11031	broad.mit.edu	37	18	9859394	9859394	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5C	5878	broad.mit.edu	37	17	40280324	40280324	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5C	5878	broad.mit.edu	37	17	40280324	40280324	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB6A	5870	broad.mit.edu	37	11	73390821	73390821	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB6A	5870	broad.mit.edu	37	11	73390821	73390821	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAC2	5880	broad.mit.edu	37	22	37637246	37637246	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAC2	5880	broad.mit.edu	37	22	37637246	37637246	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP2	729475	broad.mit.edu	37	2	17699799	17699799	+	5'Flank	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51AP2	729475	broad.mit.edu	37	2	17699799	17699799	+	5'Flank	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD54L2	23132	broad.mit.edu	37	3	51663464	51663464	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG2	5897	broad.mit.edu	37	11	36614834	36614834	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG2	5897	broad.mit.edu	37	11	36614834	36614834	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI1	10743	broad.mit.edu	37	17	17699745	17699745	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALA	5898	broad.mit.edu	37	7	39736216	39736216	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37121587	37121587	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37182833	37182833	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37121587	37121587	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GDS1	5910	broad.mit.edu	37	4	99273625	99273625	+	Splice_Site	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GDS1	5910	broad.mit.edu	37	4	99273625	99273625	+	Splice_Site	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP2A	5911	broad.mit.edu	37	13	98086692	98086694	+	5'UTR	DEL	GGC	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160259585	160259585	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160259585	160259585	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF3	10411	broad.mit.edu	37	12	48144028	48144028	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178426712	178426712	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205072911	205072911	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114384250	114384250	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM39	9584	broad.mit.edu	37	20	34295058	34295058	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM39	9584	broad.mit.edu	37	20	34295058	34295058	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40440598	40440598	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMS3	27303	broad.mit.edu	37	3	29910492	29910492	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB1	55213	broad.mit.edu	37	13	50115772	50115772	+	Intron	DEL	T	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB1	55213	broad.mit.edu	37	13	50116015	50116015	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB1	55213	broad.mit.edu	37	13	50115772	50115772	+	Intron	DEL	T	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB1	55213	broad.mit.edu	37	13	50116015	50116015	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCN1	5954	broad.mit.edu	37	11	32125147	32125147	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR3	55758	broad.mit.edu	37	1	211451575	211451575	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57346020	57346020	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57346020	57346020	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDM1	201299	broad.mit.edu	37	17	34256919	34256919	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDM1	201299	broad.mit.edu	37	17	34251573	34251573	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REEP3	221035	broad.mit.edu	37	10	65357812	65357812	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REEP3	221035	broad.mit.edu	37	10	65357812	65357812	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349306	79349306	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349306	79349306	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8425882	8425882	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8425882	8425882	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETNLB	84666	broad.mit.edu	37	3	108475438	108475438	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETNLB	84666	broad.mit.edu	37	3	108475438	108475438	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175957454	175957454	+	Silent	SNP	G	A	A	rs142920790	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175957454	175957454	+	Silent	SNP	G	A	A	rs142920790	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX1	5989	broad.mit.edu	37	19	14077445	14077445	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX1	5989	broad.mit.edu	37	19	14077445	14077445	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117244400	117244400	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117244400	117244400	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGR	5995	broad.mit.edu	37	10	86007641	86007641	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS12	6002	broad.mit.edu	37	4	3424297	3424297	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS1	5996	broad.mit.edu	37	1	192546045	192546045	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS20	8601	broad.mit.edu	37	8	54791616	54791616	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	100994031	100994031	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	100994031	100994031	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240964831	240964831	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240964831	240964831	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS9	8787	broad.mit.edu	37	17	63164444	63164444	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS9	8787	broad.mit.edu	37	17	63189700	63189700	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90020012	90020012	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCG	51458	broad.mit.edu	37	15	90020012	90020012	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63749764	63749764	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63749764	63749764	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72960002	72960002	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104780470	104780470	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104780470	104780470	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104987722	104987722	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66102012	66102012	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN2	54453	broad.mit.edu	37	20	19955398	19955398	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPK1	8737	broad.mit.edu	37	6	3083294	3083294	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87122237	87122237	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87865818	87865818	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE10	338879	broad.mit.edu	37	14	20978605	20978605	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF138	51444	broad.mit.edu	37	18	29672847	29672847	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF145	153830	broad.mit.edu	37	5	158634916	158634916	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF150	57484	broad.mit.edu	37	4	141832202	141832202	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30304987	30304987	+	Splice_Site	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101282247	101282247	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78357570	78357570	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF7	9616	broad.mit.edu	37	3	141457240	141457240	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNGTT	8732	broad.mit.edu	37	6	89638909	89638909	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNGTT	8732	broad.mit.edu	37	6	89638909	89638909	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNLS	55328	broad.mit.edu	37	10	90034661	90034661	+	3'UTR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78988050	78988050	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18550453	18550453	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18550453	18550453	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1L	83853	broad.mit.edu	37	5	10461587	10461587	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77300554	77300554	+	3'UTR	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77300565	77300565	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77300554	77300554	+	3'UTR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77300565	77300565	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68915453	68915453	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68915453	68915453	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE	6120	broad.mit.edu	37	2	210867290	210867290	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE	6120	broad.mit.edu	37	2	210867290	210867290	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPIA	22934	broad.mit.edu	37	2	89035252	89035252	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPIA	22934	broad.mit.edu	37	2	89035252	89035252	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL13	6137	broad.mit.edu	37	16	89627941	89627941	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL36A	6173	broad.mit.edu	37	X	100646510	100646510	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL5	6125	broad.mit.edu	37	1	93307458	93307458	+	3'UTR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1B	58490	broad.mit.edu	37	20	36694555	36694555	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150437062	150437062	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150437062	150437062	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRBP1	6238	broad.mit.edu	37	20	17600972	17600972	+	Missense_Mutation	SNP	A	C	C	rs144392530	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH1	89765	broad.mit.edu	37	21	43902830	43902830	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH1	89765	broad.mit.edu	37	21	43902830	43902830	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH4A	345895	broad.mit.edu	37	6	116949479	116949479	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH4A	345895	broad.mit.edu	37	6	116949479	116949479	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP4	64108	broad.mit.edu	37	3	187088747	187088747	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP4	64108	broad.mit.edu	37	3	187088747	187088747	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1	861	broad.mit.edu	37	21	36231792	36231792	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1	861	broad.mit.edu	37	21	36231792	36231792	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38934893	38934893	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237753224	237753224	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237838201	237838201	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237753224	237753224	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237893668	237893668	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237995985	237995985	+	3'UTR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33992038	33992038	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34021153	34021153	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33992038	33992038	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34021153	34021153	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34137359	34137359	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100PBP	64766	broad.mit.edu	37	1	33292344	33292344	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100PBP	64766	broad.mit.edu	37	1	33292344	33292344	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55226864	55226864	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55226864	55226864	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15870686	15870686	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15870686	15870686	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP130	79595	broad.mit.edu	37	2	128773897	128773897	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148846478	148846478	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148846478	148846478	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF1	6305	broad.mit.edu	37	22	50902690	50902690	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123801939	123801939	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123821056	123821056	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123821056	123821056	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARB2	950	broad.mit.edu	37	4	77134780	77134780	+	5'UTR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCHIP1	29970	broad.mit.edu	37	3	159104817	159104817	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLY	51540	broad.mit.edu	37	2	239006934	239006934	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38770045	38770045	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38812613	38812613	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166930006	166930006	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166866339	166866339	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166930006	166930006	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166211047	166211047	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166211143	166211143	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN5A	6331	broad.mit.edu	37	3	38671749	38671749	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52100154	52100154	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCOC	60592	broad.mit.edu	37	4	141302217	141302217	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCOC	60592	broad.mit.edu	37	4	141302217	141302217	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCPEP1	59342	broad.mit.edu	37	17	55072768	55072768	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN3	79634	broad.mit.edu	37	2	175260500	175260500	+	5'UTR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL3	57147	broad.mit.edu	37	1	169838144	169838155	+	In_Frame_Del	DEL	AAGGTCTGTTGA	-	-	rs142479162		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDAD1	55153	broad.mit.edu	37	4	76912084	76912084	+	5'UTR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDC1	6382	broad.mit.edu	37	2	20404000	20404000	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDC1	6382	broad.mit.edu	37	2	20404000	20404000	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	251414	251414	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4116637	4116637	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	3378057	3378057	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4116637	4116637	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71410752	71410752	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71427710	71427711	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71410752	71410752	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71427710	71427711	+	Missense_Mutation	DNP	CC	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR16C5	195814	broad.mit.edu	37	8	57218183	57218183	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDR16C5	195814	broad.mit.edu	37	8	57218183	57218183	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23B	10483	broad.mit.edu	37	20	18485257	18485257	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEH1L	81929	broad.mit.edu	37	18	12985300	12985300	+	3'UTR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13845697	13845697	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13845697	13845697	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169562881	169562881	+	Missense_Mutation	SNP	G	A	A	rs75278502	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83640676	83640676	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80546044	80546044	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80387870	80387870	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80546044	80546044	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84628913	84628913	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84657209	84657209	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4B	10509	broad.mit.edu	37	15	90764744	90764744	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122630855	122630855	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6B	10501	broad.mit.edu	37	19	4552427	4552427	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48022878	48022878	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836371	43836371	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836371	43836371	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101056447	101056447	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC5	256987	broad.mit.edu	37	5	79454647	79454647	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC5	256987	broad.mit.edu	37	5	79454647	79454647	+	Intron	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94770686	94770686	+	3'UTR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94770686	94770686	+	3'UTR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936017	94936017	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936017	94936017	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61264475	61264475	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61305166	61305166	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61305166	61305166	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61465989	61465989	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61465989	61465989	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179982198	179982198	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179982198	179982198	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42530068	42530068	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42530068	42530068	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD5	55209	broad.mit.edu	37	3	9482393	9482393	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150935522	150935522	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150935522	150935522	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3A3	10946	broad.mit.edu	37	1	38442654	38442654	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFI1	9814	broad.mit.edu	37	22	31969017	31969017	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRP1	6422	broad.mit.edu	37	8	41128996	41128997	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19141921	19141921	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19141921	19141921	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46321290	46321290	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK494	124923	broad.mit.edu	37	17	26939458	26939458	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTB	54557	broad.mit.edu	37	5	65008895	65008895	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGTB	54557	broad.mit.edu	37	5	65008895	65008895	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D1B	117157	broad.mit.edu	37	1	162368641	162368641	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156776986	156776986	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156776988	156776988	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156776986	156776986	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156776988	156776988	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156779566	156779566	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP1	23616	broad.mit.edu	37	22	38051611	38051611	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2822198	2822198	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2822198	2822198	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235949751	235949751	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235949751	235949751	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235962399	235962399	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3D19	152503	broad.mit.edu	37	4	152043451	152043451	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3D19	152503	broad.mit.edu	37	4	152043451	152043451	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2B	285590	broad.mit.edu	37	5	171800732	171800732	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF3	344558	broad.mit.edu	37	2	110048969	110048969	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF3	344558	broad.mit.edu	37	2	110048969	110048969	+	Silent	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX2	6474	broad.mit.edu	37	3	157820536	157820536	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX2	6474	broad.mit.edu	37	3	157820536	157820536	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHOX	6473	broad.mit.edu	37	X	601547	601547	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146256096	146256096	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146256096	146256096	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC12	89858	broad.mit.edu	37	19	51994903	51994903	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC12	89858	broad.mit.edu	37	19	51994903	51994903	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC12	89858	broad.mit.edu	37	19	52002324	52002324	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52147285	52147285	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52147285	52147285	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC7	27036	broad.mit.edu	37	19	51656192	51656192	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC7	27036	broad.mit.edu	37	19	51656192	51656192	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51626625	51626625	+	5'Flank	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116798248	116798249	+	Intron	DNP	CA	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116798248	116798249	+	Intron	DNP	CA	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3B	23309	broad.mit.edu	37	19	16963978	16963978	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1	6494	broad.mit.edu	37	11	65417286	65417286	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1	6494	broad.mit.edu	37	11	65417286	65417286	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT1	23411	broad.mit.edu	37	10	69651262	69651262	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT2	22933	broad.mit.edu	37	19	39389219	39389219	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L2	23517	broad.mit.edu	37	5	54603803	54603803	+	Translation_Start_Site	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31927146	31927146	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160458763	160458763	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160458763	160458763	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160460826	160460826	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103710522	103710522	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45239296	45239296	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6606404	6606404	+	Silent	SNP	G	T	T	rs142320179		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6606404	6606404	+	Silent	SNP	G	T	T	rs142320179		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43311195	43311195	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43311195	43311195	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43223121	43223121	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43223121	43223121	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A10	117247	broad.mit.edu	37	6	111527987	111527987	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A10	117247	broad.mit.edu	37	6	111527987	111527987	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25850940	25850940	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A1	6573	broad.mit.edu	37	21	46957674	46957674	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A3	80704	broad.mit.edu	37	2	228552717	228552717	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A3	80704	broad.mit.edu	37	2	228552717	228552717	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A1	6574	broad.mit.edu	37	2	113414856	113414856	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A1	6574	broad.mit.edu	37	2	113414856	113414856	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116609104	116609104	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62751918	62751918	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62751918	62751918	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19785946	19785946	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19785946	19785946	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A12	8604	broad.mit.edu	37	2	172648203	172648203	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A20	788	broad.mit.edu	37	3	48897108	48897108	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A21	89874	broad.mit.edu	37	14	37344343	37344343	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A2	83884	broad.mit.edu	37	5	140683365	140683366	+	Missense_Mutation	DNP	CA	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A31	83447	broad.mit.edu	37	4	128651782	128651782	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A31	83447	broad.mit.edu	37	4	128651782	128651782	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A6	293	broad.mit.edu	37	X	1508207	1508207	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A6	293	broad.mit.edu	37	X	1508329	1508329	+	Missense_Mutation	SNP	C	G	G	rs140307739		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A6	293	broad.mit.edu	37	X	1508329	1508329	+	Missense_Mutation	SNP	C	G	G	rs140307739		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A8	116369	broad.mit.edu	37	6	35927260	35927260	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A3	64078	broad.mit.edu	37	9	86902971	86902971	+	Missense_Mutation	SNP	C	A	A	rs148078245	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A3	64078	broad.mit.edu	37	9	86902971	86902971	+	Missense_Mutation	SNP	C	A	A	rs148078245	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A3	6515	broad.mit.edu	37	12	8088461	8088461	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27481775	27481775	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27481775	27481775	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A9	10463	broad.mit.edu	37	4	42024921	42024921	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC32A1	140679	broad.mit.edu	37	20	37357156	37357156	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC33A1	9197	broad.mit.edu	37	3	155571195	155571195	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC33A1	9197	broad.mit.edu	37	3	155571195	155571195	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A2	153201	broad.mit.edu	37	5	150701583	150701583	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A2	153201	broad.mit.edu	37	5	150701583	150701583	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A2	153201	broad.mit.edu	37	5	150715147	150715147	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A10	124565	broad.mit.edu	37	17	79234101	79234101	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A10	124565	broad.mit.edu	37	17	79250893	79250893	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84050323	84050323	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84050323	84050323	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44503035	44503035	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44503035	44503035	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A2	6520	broad.mit.edu	37	11	62655685	62655685	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A2	6520	broad.mit.edu	37	11	62655685	62655685	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105198867	105198867	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105198867	105198867	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A1	8501	broad.mit.edu	37	11	57252750	57252750	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33947350	33947350	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33947350	33947350	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC47A1	55244	broad.mit.edu	37	17	19463715	19463715	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162711535	162711535	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42337006	42337006	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42335714	42335714	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42335826	42335826	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42336924	42336924	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42337006	42337006	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A7	9497	broad.mit.edu	37	3	27444610	27444610	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26708124	26708124	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108609503	108609503	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108624895	108624895	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108609503	108609503	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108624895	108624895	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10967706	10967706	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85285753	85285754	+	Missense_Mutation	DNP	TG	CT	CT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A20	54716	broad.mit.edu	37	3	45807300	45807300	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A20	54716	broad.mit.edu	37	3	45807300	45807300	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A3	6531	broad.mit.edu	37	5	1421804	1421804	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14518662	14518662	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14485106	14485106	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14518662	14518662	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170214601	170214601	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170214601	170214601	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A6	9057	broad.mit.edu	37	16	68309111	68309111	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173567171	173567171	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103148765	103148765	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103148765	103148765	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48431501	48431501	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48431501	48431501	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO3A1	28232	broad.mit.edu	37	15	92669192	92669192	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4A1	28231	broad.mit.edu	37	20	61296210	61296210	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98807550	98807550	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98807550	98807550	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168137973	168137973	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142716437	142716438	+	Missense_Mutation	DNP	CC	GA	GA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLN	6588	broad.mit.edu	37	11	107578452	107578452	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLN	6588	broad.mit.edu	37	11	107578452	107578452	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLPI	6590	broad.mit.edu	37	20	43881764	43881764	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11138587	11138588	+	Frame_Shift_Ins	INS	-	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11138587	11138588	+	Frame_Shift_Ins	INS	-	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56575302	56575302	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCHD1	23347	broad.mit.edu	37	18	2718234	2718234	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18856973	18856973	+	Silent	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF2	64750	broad.mit.edu	37	17	62558992	62558992	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88406166	88406166	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI1	6615	broad.mit.edu	37	20	48604257	48604257	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10286806	10286806	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127341074	127341074	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127341074	127341074	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-14	767592	broad.mit.edu	37	14	101436271	101436271	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-5	767581	broad.mit.edu	37	14	101420712	101420712	+	5'Flank	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25475993	25475993	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRK	54861	broad.mit.edu	37	3	43345163	43345166	+	Frame_Shift_Del	DEL	GACA	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP40	9410	broad.mit.edu	37	1	31732846	31732846	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP40	9410	broad.mit.edu	37	1	31732846	31732846	+	3'UTR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51363276	51363276	+	Missense_Mutation	SNP	G	T	T	rs145685246		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51415461	51415461	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51363276	51363276	+	Missense_Mutation	SNP	G	T	T	rs145685246		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51415461	51415461	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX10	29887	broad.mit.edu	37	7	26411973	26411973	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX27	81609	broad.mit.edu	37	1	151641082	151641082	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101601064	101601064	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101601064	101601064	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX8	29886	broad.mit.edu	37	7	2314871	2314871	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX9	51429	broad.mit.edu	37	6	158342655	158342655	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX9	51429	broad.mit.edu	37	6	158342655	158342655	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108339277	108339277	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108339277	108339277	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108412115	108412115	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108427613	108427613	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39278356	39278356	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS2	6655	broad.mit.edu	37	14	50628183	50628183	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX13	9580	broad.mit.edu	37	1	204086867	204086867	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231112596	231112596	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231112596	231112596	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231176057	231176057	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP2	6668	broad.mit.edu	37	17	46002953	46002953	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP2	6668	broad.mit.edu	37	17	46002977	46002977	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP2	6668	broad.mit.edu	37	17	46002953	46002953	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA3	124912	broad.mit.edu	37	17	31324729	31324729	+	Splice_Site	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPACA3	124912	broad.mit.edu	37	17	31324729	31324729	+	Splice_Site	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26919437	26919437	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26919437	26919437	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYC	387778	broad.mit.edu	37	11	64938714	64938714	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYC	387778	broad.mit.edu	37	11	64938714	64938714	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35654779	35654779	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35776497	35776497	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16259961	16259973	+	Frame_Shift_Del	DEL	AGAATTCGTCCCA	-	-	rs149855157	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPSB1	80176	broad.mit.edu	37	1	9416304	9416304	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPSB1	80176	broad.mit.edu	37	1	9416304	9416304	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158607701	158607701	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158607701	158607701	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158632376	158632377	+	Intron	DEL	GA	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPZ1	84654	broad.mit.edu	37	5	79616095	79616095	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPZ1	84654	broad.mit.edu	37	5	79616095	79616095	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45801711	45801711	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30732215	30732216	+	Missense_Mutation	DNP	GG	TT	TT	rs141288104		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64536211	64536211	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64536211	64536211	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9100069	9100069	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9100069	9100069	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRD	402055	broad.mit.edu	37	22	26885907	26885907	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRD	402055	broad.mit.edu	37	22	26885907	26885907	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSBP2	23635	broad.mit.edu	37	5	80716338	80716338	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149475833	149475833	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR3	6753	broad.mit.edu	37	22	37603250	37603250	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX2IP	117178	broad.mit.edu	37	1	85115651	85115651	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48209102	48209102	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48209102	48209102	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52686348	52686348	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52686348	52686348	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130058639	130058639	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL3	6487	broad.mit.edu	37	1	44386406	44386406	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL3	6487	broad.mit.edu	37	1	44386406	44386406	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8718304	8718304	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8718304	8718304	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC6	30815	broad.mit.edu	37	9	130656766	130656766	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC6	30815	broad.mit.edu	37	9	130656766	130656766	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA3	51046	broad.mit.edu	37	18	55024197	55024197	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA3	51046	broad.mit.edu	37	18	55024197	55024197	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA4	7903	broad.mit.edu	37	5	100231420	100231420	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104049141	104049141	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104131611	104131611	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136087831	136087831	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM2	10254	broad.mit.edu	37	2	152988769	152988769	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37815304	37815304	+	Missense_Mutation	SNP	G	T	T	rs11556624	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37815439	37815439	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37815304	37815304	+	Missense_Mutation	SNP	G	T	T	rs11556624	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37815439	37815439	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STH	246744	broad.mit.edu	37	17	44077047	44077047	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81879214	81879214	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81879214	81879214	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4483788	4483788	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX7	8417	broad.mit.edu	37	6	132785291	132785291	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46293862	46293862	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46293862	46293862	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT4A1	25830	broad.mit.edu	37	22	44234917	44234918	+	Intron	DNP	CC	AA	AA			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	891533	891533	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	891533	891533	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48046759	48046759	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48046759	48046759	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUOX	6821	broad.mit.edu	37	12	56397693	56397693	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT5H	6829	broad.mit.edu	37	19	39950277	39950277	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD2	56241	broad.mit.edu	37	22	24580910	24580911	+	Splice_Site	DNP	TA	GT	GT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV39H2	79723	broad.mit.edu	37	10	14939210	14939210	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149882451	149882451	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVOP	55530	broad.mit.edu	37	12	109311917	109311917	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64606758	64606758	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64606758	64606758	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT11	23208	broad.mit.edu	37	1	155838184	155838184	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT15	83849	broad.mit.edu	37	10	46968904	46968904	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT16	83851	broad.mit.edu	37	14	62550717	62550717	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40851705	40851705	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37953526	37953526	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37953526	37953526	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2B	93624	broad.mit.edu	37	4	7056721	7056721	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2B	93624	broad.mit.edu	37	4	7056721	7056721	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1D	79101	broad.mit.edu	37	11	93471083	93471083	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60551524	60551524	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF6	6878	broad.mit.edu	37	7	99710562	99710562	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAP2	6891	broad.mit.edu	37	6	32805830	32805830	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAPBP	6892	broad.mit.edu	37	6	33272866	33272866	+	Silent	SNP	G	A	A	rs145473025		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234593467	234593467	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234593467	234593467	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150460192	150460192	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150460192	150460192	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150463952	150463952	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33448880	33448880	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19185867	19185867	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R2	80834	broad.mit.edu	37	1	19185867	19185867	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TASP1	55617	broad.mit.edu	37	20	13561648	13561648	+	Intron	SNP	A	T	T	rs34179122		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAX1BP1	8887	broad.mit.edu	37	7	27825146	27825146	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAX1BP1	8887	broad.mit.edu	37	7	27809297	27809297	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAX1BP1	8887	broad.mit.edu	37	7	27825146	27825146	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77987324	77987324	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D17	79735	broad.mit.edu	37	19	50384521	50384521	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D20	128637	broad.mit.edu	37	20	422177	422178	+	Intron	INS	-	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37298965	37298965	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37298965	37298965	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3B	414059	broad.mit.edu	37	17	34499179	34499179	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60349733	60349733	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8B	54885	broad.mit.edu	37	X	106084040	106084040	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8B	54885	broad.mit.edu	37	X	106084040	106084040	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9B	23061	broad.mit.edu	37	5	179306823	179306823	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCEL	219899	broad.mit.edu	37	11	120916426	120916426	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCEL	219899	broad.mit.edu	37	11	120916426	120916426	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCE	6905	broad.mit.edu	37	1	235612020	235612020	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBK1	29110	broad.mit.edu	37	12	64889185	64889185	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1XR1	79718	broad.mit.edu	37	3	176769466	176769466	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX21	30009	broad.mit.edu	37	17	45822468	45822468	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX21	30009	broad.mit.edu	37	17	45822468	45822468	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701011	62701011	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701953	62701953	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701011	62701011	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701953	62701953	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3B	51224	broad.mit.edu	37	18	44560240	44560240	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152059275	152059275	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152057927	152057927	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152059275	152059275	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152083697	152083697	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152083697	152083697	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96135898	96135899	+	Missense_Mutation	DNP	AG	TT	TT	rs76461999		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCOF1	6949	broad.mit.edu	37	5	149749093	149749093	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCOF1	6949	broad.mit.edu	37	5	149749093	149749093	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124184360	124184360	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDGF1	6997	broad.mit.edu	37	3	46620584	46620584	+	Splice_Site	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDGF1	6997	broad.mit.edu	37	3	46620584	46620584	+	Splice_Site	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD10	126668	broad.mit.edu	37	1	154479295	154479295	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD10	126668	broad.mit.edu	37	1	154479295	154479295	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD3	81550	broad.mit.edu	37	13	61068588	61068588	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97862337	97862337	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT1	83659	broad.mit.edu	37	17	6716031	6716031	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT1	83659	broad.mit.edu	37	17	6716031	6716031	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53451107	53451107	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53451395	53451395	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53451395	53451395	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20851673	20851673	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESK1	7016	broad.mit.edu	37	9	35606843	35606843	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESK1	7016	broad.mit.edu	37	9	35606843	35606843	+	Frame_Shift_Del	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70406705	70406705	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70406705	70406705	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56679958	56679958	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56679958	56679958	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30704584	30704584	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30704584	30704584	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX9	374618	broad.mit.edu	37	15	56681599	56681599	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP2	7029	broad.mit.edu	37	3	141678471	141678471	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP2	7029	broad.mit.edu	37	3	141678471	141678471	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133479967	133479967	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133483667	133483667	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133479967	133479967	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133483667	133483667	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2411261	2411262	+	Intron	DNP	CA	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2411261	2411262	+	Intron	DNP	CA	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43577271	43577271	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH1L	51497	broad.mit.edu	37	20	57569177	57569177	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169632775	169632775	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169632775	169632775	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS4	7060	broad.mit.edu	37	5	79357663	79357663	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THG1L	54974	broad.mit.edu	37	5	157158442	157158442	+	Translation_Start_Site	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THG1L	54974	broad.mit.edu	37	5	157159837	157159837	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THG1L	54974	broad.mit.edu	37	5	157158442	157158442	+	Translation_Start_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THG1L	54974	broad.mit.edu	37	5	157159837	157159837	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THNSL2	55258	broad.mit.edu	37	2	88482504	88482504	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THNSL2	55258	broad.mit.edu	37	2	88482504	88482504	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC5	8563	broad.mit.edu	37	22	29907371	29907371	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11485703	11485703	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11450869	11450869	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11485703	11485703	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137990695	137990695	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155500537	155500537	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155500537	155500537	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKT	7086	broad.mit.edu	37	3	53263204	53263204	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE3	7090	broad.mit.edu	37	15	70342515	70342515	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE3	7090	broad.mit.edu	37	15	70342515	70342515	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171911655	171911655	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98192565	98192566	+	Frame_Shift_Ins	INS	-	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35719611	35719611	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR9	54106	broad.mit.edu	37	3	52257047	52257047	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR9	54106	broad.mit.edu	37	3	52257047	52257047	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF2	53345	broad.mit.edu	37	19	19381247	19381247	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2560534	2560534	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2560534	2560534	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2616728	2616728	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC2	9911	broad.mit.edu	37	1	205237982	205237982	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68941453	68941453	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68941453	68941453	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED8	283578	broad.mit.edu	37	14	77809950	77809950	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44402470	44402470	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132A	54972	broad.mit.edu	37	11	60699590	60699590	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132A	54972	broad.mit.edu	37	11	60699590	60699590	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126137061	126137061	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126135198	126135198	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126137061	126137061	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM135	65084	broad.mit.edu	37	11	86970191	86970191	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM135	65084	broad.mit.edu	37	11	86970191	86970191	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM146	257062	broad.mit.edu	37	19	5768341	5768341	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM174	134288	broad.mit.edu	37	5	72469853	72469853	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM18	129787	broad.mit.edu	37	2	669766	669766	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM18	129787	broad.mit.edu	37	2	669766	669766	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM190	147744	broad.mit.edu	37	19	55889138	55889138	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15433705	15433705	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15433705	15433705	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762590	130762590	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762655	130762655	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27263151	27263151	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27263151	27263151	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM39B	55116	broad.mit.edu	37	1	32568362	32568362	+	3'UTR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM68	137695	broad.mit.edu	37	8	56675566	56675566	+	5'UTR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM68	137695	broad.mit.edu	37	8	56675566	56675566	+	5'UTR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM82	388595	broad.mit.edu	37	1	16069291	16069291	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM86A	144110	broad.mit.edu	37	11	18720497	18720497	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87B	84910	broad.mit.edu	37	2	112834955	112834955	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMF1	7110	broad.mit.edu	37	3	69096968	69096968	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68708241	68708241	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68708241	68708241	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29786167	29786167	+	Missense_Mutation	SNP	C	A	A	rs139579223	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29786167	29786167	+	Missense_Mutation	SNP	C	A	A	rs139579223	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC3	160418	broad.mit.edu	37	12	88582584	88582584	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC3	160418	broad.mit.edu	37	12	88588674	88588674	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117786556	117786556	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP2	7127	broad.mit.edu	37	14	103592753	103592753	+	5'UTR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP6	7130	broad.mit.edu	37	2	152226434	152226434	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP6	7130	broad.mit.edu	37	2	152226512	152226512	+	Intron	SNP	G	C	C	rs56801020	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP6	7130	broad.mit.edu	37	2	152226521	152226521	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP6	7130	broad.mit.edu	37	2	152226512	152226512	+	Intron	SNP	G	C	C	rs56801020	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP6	7130	broad.mit.edu	37	2	152226521	152226521	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF25	8718	broad.mit.edu	37	1	6521752	6521752	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122063033	122063033	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122063033	122063033	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNK2	10188	broad.mit.edu	37	3	195605489	195605489	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNK2	10188	broad.mit.edu	37	3	195605489	195605489	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI2	7136	broad.mit.edu	37	11	1862435	1862435	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3	7137	broad.mit.edu	37	19	55668986	55668986	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3	7137	broad.mit.edu	37	19	55668986	55668986	+	5'Flank	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC18	84629	broad.mit.edu	37	7	5399080	5399080	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218713785	218713785	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218713785	218713785	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47343137	47343137	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32017941	32017941	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32037579	32037579	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32017941	32017941	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1	10043	broad.mit.edu	37	22	35741608	35741608	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM70A	9868	broad.mit.edu	37	3	100084239	100084239	+	3'UTR	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR3A	64222	broad.mit.edu	37	1	179063996	179063996	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX	9760	broad.mit.edu	37	8	59763975	59763975	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578550	7578550	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578550	7578550	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP73	7161	broad.mit.edu	37	1	3649416	3649416	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP73	7161	broad.mit.edu	37	1	3649416	3649416	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154155388	154155388	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1418261	1418261	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1418261	1418261	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPSD1	23430	broad.mit.edu	37	16	1306299	1306299	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10941761	10941761	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10941765	10941765	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10920283	10920283	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10941761	10941761	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10941765	10941765	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREH	11181	broad.mit.edu	37	11	118532435	118532435	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREH	11181	broad.mit.edu	37	11	118532435	118532435	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREX1	11277	broad.mit.edu	37	3	48508518	48508518	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72680629	72680629	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72680629	72680629	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM10	10107	broad.mit.edu	37	6	30125268	30125268	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM31	11074	broad.mit.edu	37	6	30080680	30080680	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM31	11074	broad.mit.edu	37	6	30071588	30071588	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM31	11074	broad.mit.edu	37	6	30080680	30080680	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM37	4591	broad.mit.edu	37	17	57126552	57126552	+	Missense_Mutation	SNP	T	C	C	rs77807605		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM38	10475	broad.mit.edu	37	6	25973379	25973379	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM38	10475	broad.mit.edu	37	6	25973379	25973379	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM50	135892	broad.mit.edu	37	7	72734212	72734212	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM50	135892	broad.mit.edu	37	7	72734212	72734212	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM54	57159	broad.mit.edu	37	2	27521391	27521391	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM9	114088	broad.mit.edu	37	14	51477087	51477087	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189022144	189022144	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14363882	14363882	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230660102	230660102	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT61B	55006	broad.mit.edu	37	2	29072958	29072958	+	3'UTR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT61B	55006	broad.mit.edu	37	2	29072958	29072958	+	3'UTR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38266182	38266182	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38266182	38266182	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38266380	38266380	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101375108	101375108	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135651315	135651315	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73442630	73442630	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73213554	73213554	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73442630	73442630	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116426548	116426548	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116599299	116599299	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116426548	116426548	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116599299	116599299	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPT1	83707	broad.mit.edu	37	11	63991664	63991664	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98509822	98509822	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98509822	98509822	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN2	80746	broad.mit.edu	37	3	12558159	12558159	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81610458	81610458	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51872150	51872150	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51872150	51872150	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769448	31769448	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769448	31769448	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN17	26262	broad.mit.edu	37	5	176084058	176084058	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPO2	222642	broad.mit.edu	37	6	41010795	41010795	+	Missense_Mutation	SNP	G	A	A	rs148297848	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPO2	222642	broad.mit.edu	37	6	41010795	41010795	+	Missense_Mutation	SNP	G	A	A	rs148297848	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSTD2	158427	broad.mit.edu	37	9	100372860	100372860	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75095212	75095212	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75095212	75095212	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39161449	39161449	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39161449	39161449	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166756187	166756187	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166756187	166756187	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC24	164118	broad.mit.edu	37	1	156554719	156554719	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC24	164118	broad.mit.edu	37	1	156554719	156554719	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40095333	40095333	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC25	83538	broad.mit.edu	37	17	40095333	40095333	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC38	55020	broad.mit.edu	37	22	46664500	46664500	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39A	22996	broad.mit.edu	37	1	51760223	51760223	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39A	22996	broad.mit.edu	37	1	51760223	51760223	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC3	7267	broad.mit.edu	37	21	38536327	38536327	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76211508	76211508	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76243112	76243112	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76211508	76211508	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76243112	76243112	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863507	46863507	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863507	46863507	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84399443	84399443	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84399443	84399443	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTL	150465	broad.mit.edu	37	2	113286318	113286318	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTL	150465	broad.mit.edu	37	2	113286318	113286318	+	Silent	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179396241	179396241	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179489967	179489967	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179516838	179516838	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179596652	179596652	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179599169	179599169	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179641721	179641721	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179396241	179396241	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179407526	179407526	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179451993	179451993	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179489967	179489967	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179496937	179496937	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179516838	179516838	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179547466	179547466	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179559588	179559588	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179596652	179596652	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179599169	179599169	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179612234	179612234	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179622626	179622626	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179640848	179640848	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179641721	179641721	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH1	57348	broad.mit.edu	37	19	54940621	54940621	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72233616	72233616	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA1B	10376	broad.mit.edu	37	12	49521710	49521710	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6501469	6501469	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6501469	6501469	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBD1	51174	broad.mit.edu	37	17	57958297	57958297	+	Silent	SNP	T	G	G	rs142691296		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBD1	51174	broad.mit.edu	37	17	57958297	57958297	+	Silent	SNP	T	G	G	rs142691296		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22855270	22855270	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15517098	15517098	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15517098	15517098	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWISTNB	221830	broad.mit.edu	37	7	19748388	19748388	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154207796	154207796	+	Intron	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125397990	125397990	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2D2	7322	broad.mit.edu	37	5	138990584	138990584	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2G1	7326	broad.mit.edu	37	17	4186205	4186205	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2G1	7326	broad.mit.edu	37	17	4186205	4186205	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2J1	51465	broad.mit.edu	37	6	90039433	90039433	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2J1	51465	broad.mit.edu	37	6	90039433	90039433	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2O	63893	broad.mit.edu	37	17	74401444	74401444	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42559878	42559878	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42559878	42559878	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR3	130507	broad.mit.edu	37	2	170937267	170937267	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR3	130507	broad.mit.edu	37	2	170937267	170937267	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19404343	19404343	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19413477	19413477	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19491400	19491400	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19491400	19491400	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26612443	26612443	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN4	23190	broad.mit.edu	37	2	136540316	136540316	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128917074	128917074	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70455391	70455391	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70455391	70455391	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70070363	70070363	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B4	7363	broad.mit.edu	37	4	70352549	70352549	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHMK1	127933	broad.mit.edu	37	1	162470960	162470960	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43504190	43504190	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43508578	43508578	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43504190	43504190	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43508578	43508578	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC119	9094	broad.mit.edu	37	17	26874949	26874949	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17721043	17721043	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17738541	17738541	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35370326	35370326	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35370326	35370326	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35541202	35541202	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35541202	35541202	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC80	285175	broad.mit.edu	37	2	210705419	210705419	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	11998304	11998304	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	11998304	11998304	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48141413	48141413	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48141413	48141413	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126220181	126220181	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126229653	126229653	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126220181	126220181	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215812473	215812473	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216257003	216257003	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216348824	216348824	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216465430	216465430	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215812473	215812473	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215990577	215990577	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216144148	216144148	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216257003	216257003	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216348824	216348824	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216465430	216465430	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP1	7398	broad.mit.edu	37	1	62910485	62910485	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113692339	113692339	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP50	373509	broad.mit.edu	37	15	50835935	50835935	+	Nonsense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6NL	9712	broad.mit.edu	37	10	11505373	11505373	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6NL	9712	broad.mit.edu	37	10	11505373	11505373	+	Silent	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8989486	8989486	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446262	107446262	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111421771	111421771	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39011309	39011309	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39011311	39011311	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46215550	46215550	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	47595389	47595389	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	8662244	8662244	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	133734738	133734738	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49895335	49895336	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50149529	50149529	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58189734	58189734	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67700680	67700680	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71530862	71530862	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86735830	86735830	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89486754	89486754	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499406	129499406	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19301530	19301530	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29297208	29297208	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	41959298	41959298	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532134	65532135	+	IGR	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68406931	68406931	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79483168	79483168	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79483668	79483668	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88547974	88547974	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90644280	90644280	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90644442	90644442	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	103840797	103840797	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57445636	57445636	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103193	96103193	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	26173591	26173591	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31108859	31108859	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	43407830	43407830	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	75479328	75479328	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	77272138	77272138	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	90479940	90479940	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32214106	32214106	+	IGR	SNP	G	A	A	rs139984663	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33654353	33654353	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	75226965	75226965	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25994389	25994389	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30438868	30438868	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14189234	14189234	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15004117	15004117	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	156795	156795	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20406155	20406155	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22966729	22966729	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23040029	23040029	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	50577612	50577613	+	IGR	DNP	GG	TT	TT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54140353	54140353	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106240849	106240849	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149060241	149060241	+	IGR	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168420093	168420093	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222436064	222436064	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228167705	228167705	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	236275439	236275439	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242222791	242222791	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248526010	248526011	+	IGR	DNP	CC	AT	AT			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248789357	248789357	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	32890576	32890576	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79987743	79987743	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	92000826	92000826	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18763512	18763512	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29862094	29862094	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32802560	32802560	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	4004969	4004969	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	49747765	49747765	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53968524	53968524	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6194487	6194487	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10614803	10614803	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898318	14898318	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899518	14899518	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798437	21798437	+	IGR	SNP	C	A	A	rs2826247		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	23526479	23526479	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	30370059	30370059	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	34214076	34214076	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	101041255	101041255	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105295027	105295027	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105387657	105387657	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107009544	107009544	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130987215	130987215	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384151	132384151	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162359014	162359014	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182559595	182559596	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187866931	187866931	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195052549	195052549	+	IGR	SNP	C	A	A	rs116148341	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210043804	210043804	+	IGR	DEL	T	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800669	91800669	+	IGR	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91902614	91902614	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95618915	95618915	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	98253707	98253707	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180042203	180042203	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35258363	35258363	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75378624	75378624	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88367130	88367130	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90274868	90274868	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113659790	113659790	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137277381	137277381	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	138369360	138369360	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190943008	190943008	+	IGR	SNP	G	T	T	rs141181733	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190943012	190943012	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4176947	4176947	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	78003941	78003941	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	127122122	127122122	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174386088	174386088	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180552160	180552160	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911264	25911264	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77080873	77080873	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106114576	106114576	+	IGR	SNP	C	A	A	rs148982486	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121702720	121702720	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603827	153603827	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23972975	23972975	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30437658	30437658	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50865844	50865844	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	52604498	52604498	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	52735037	52735037	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80776520	80776520	+	IGR	SNP	G	A	A	rs145441375	by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124117039	124117039	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	132854491	132854491	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	2553087	2553087	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27531633	27531633	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56636091	56636091	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57245058	57245058	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64323779	64323779	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65970329	65970329	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128098821	128098821	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134656939	134656939	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47502929	47502929	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48069380	48069380	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653701	50653701	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	60806485	60806485	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102067816	102067816	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109879159	109879159	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	125329805	125329805	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	27610443	27610443	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689922	30689922	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254201	31254201	+	IGR	DEL	G	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66333613	66333613	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513359	66513359	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477116	7477116	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	95683614	95683614	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139114718	139114718	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146882622	146882622	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25047839	25047839	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26178969	26178969	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179755	26179755	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57703719	57703719	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89294206	89294206	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	10216507	10216507	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107445207	107445207	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446262	107446262	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111421771	111421771	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	111567574	111567574	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38934305	38934305	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38989758	38989758	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43191255	43191255	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43232270	43232270	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46215550	46215550	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	57427100	57427100	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	65662405	65662405	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82535869	82535869	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	8662244	8662244	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	94428527	94428527	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	106182446	106182446	+	IGR	SNP	C	G	G	rs115345140	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123811393	123811393	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	133734738	133734738	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30390026	30390026	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4880957	4880957	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49000635	49000635	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49895335	49895336	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49895371	49895371	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50149529	50149529	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51436076	51436076	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51451455	51451455	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55277674	55277674	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55782589	55782589	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56057587	56057587	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56247045	56247046	+	IGR	DNP	GT	TG	TG			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56280441	56280442	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58189734	58189734	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	67700680	67700680	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	69552763	69552763	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71530862	71530862	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	74790915	74790915	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86735830	86735830	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	88141865	88141865	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89486754	89486754	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	91683057	91683057	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	97158069	97158069	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	98436089	98436089	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499406	129499406	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33138877	33138877	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	38493483	38493483	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	46986764	46986764	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	48836434	48836434	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58788575	58788575	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	61624948	61624948	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	61626780	61626780	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64217027	64217027	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	76509476	76509476	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80660404	80660404	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80714208	80714208	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19301530	19301530	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19747128	19747128	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29173083	29173083	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	29297208	29297208	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	41959298	41959298	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	42005473	42005473	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	47881468	47881468	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64316943	64316943	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532134	65532135	+	IGR	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65884009	65884009	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68406931	68406931	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	75403091	75403091	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79483168	79483168	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79483668	79483668	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87871376	87871376	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88547974	88547974	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90014808	90014808	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90644280	90644280	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90644442	90644442	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	99293020	99293020	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	103840797	103840797	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19488948	19488948	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806997	19806997	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137508	20137508	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	21622278	21622278	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	21631166	21631166	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	24219392	24219392	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39855136	39855137	+	IGR	DEL	GG	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	43744679	43744679	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45330747	45330747	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	49288677	49288677	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	50394501	50394501	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	57445636	57445636	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103193	96103193	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102368988	102368988	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	26173591	26173591	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31108859	31108859	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	52387527	52387527	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	68266916	68266916	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	75479328	75479328	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	77272138	77272138	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84722847	84722847	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	11337177	11337177	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20167064	20167064	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20250381	20250381	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20736680	20736680	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33372847	33372847	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33401931	33401931	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33499152	33499152	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33503670	33503670	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33503684	33503684	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33527793	33527793	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33654353	33654353	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	75226965	75226965	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	78082734	78082734	+	IGR	SNP	G	A	A	rs114518179	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30438868	30438868	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	39258399	39258399	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	39482088	39482088	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	47501833	47501833	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51512129	51512129	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52555218	52555218	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60320432	60320432	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60369187	60369187	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	61028219	61028219	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11552736	11552736	+	IGR	SNP	G	C	C	rs145305066	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14189234	14189234	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	20480604	20480604	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	46004867	46004867	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57446155	57446155	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	58461846	58461846	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	70285713	70285713	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	72057405	72057405	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	156795	156795	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20242718	20242718	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	21838527	21838527	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22321209	22321209	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22790656	22790656	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22966729	22966729	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23040029	23040029	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35874739	35874739	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	42122815	42122815	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	43780581	43780581	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	50577612	50577613	+	IGR	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	51697310	51697310	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53409124	53409124	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54140353	54140353	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55209735	55209735	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104469660	104469660	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106240849	106240849	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	109051732	109051732	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111391275	111391275	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	112710165	112710165	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120151207	120151208	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	148903768	148903768	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149037848	149037848	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149047894	149047894	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149060241	149060241	+	IGR	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149092901	149092901	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	150752910	150752910	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	157694544	157694544	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424422	158424422	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158665161	158665161	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	161587937	161587937	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168420093	168420093	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173110574	173110574	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	187532700	187532700	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	198918458	198918458	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	206506593	206506593	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219783210	219783210	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	222436064	222436064	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	229321587	229321588	+	IGR	INS	-	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	236275439	236275439	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238216046	238216046	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	238431772	238431772	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242222791	242222791	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248526010	248526011	+	IGR	DNP	CC	AT	AT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	249067711	249067711	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	32890576	32890576	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	38699526	38699526	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	73571246	73571246	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79987743	79987743	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	81563988	81563989	+	IGR	INS	-	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	92000826	92000826	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18763512	18763512	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29862094	29862094	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	32802560	32802560	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	3445931	3445931	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	4004969	4004969	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	49747765	49747765	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53968524	53968524	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6194487	6194487	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	7812733	7812733	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10614803	10614803	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14786103	14786103	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14795484	14795484	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898318	14898318	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899053	14899053	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899518	14899518	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15384486	15384486	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	21798437	21798437	+	IGR	SNP	C	A	A	rs2826247		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	23526479	23526479	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	30370059	30370059	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31635717	31635717	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32434644	32434644	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	34214076	34214076	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16414273	16414273	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16940750	16940750	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17338495	17338495	+	IGR	SNP	C	A	A	rs138052012	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	20366523	20366523	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	32579542	32579542	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	101041255	101041255	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	102866442	102866442	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105295027	105295027	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105387657	105387657	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	113691030	113691030	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130987215	130987215	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131414404	131414404	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384151	132384151	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132861740	132861740	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	137087333	137087333	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	137302016	137302016	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162359014	162359014	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168572080	168572080	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168572227	168572227	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	177203427	177203427	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	182559595	182559596	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	18704793	18704793	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	187866931	187866931	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	195052549	195052549	+	IGR	SNP	C	A	A	rs116148341	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	198369484	198369484	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	200525246	200525246	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210043804	210043804	+	IGR	DEL	T	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52302714	52302714	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62047665	62047665	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	65200551	65200551	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	79390715	79390715	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81427755	81427755	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800407	91800407	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800669	91800669	+	IGR	DEL	C	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91873165	91873165	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91902614	91902614	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91933397	91933397	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95618915	95618915	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96148025	96148025	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96240533	96240533	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	98253707	98253707	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	112416444	112416444	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	112568338	112568338	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	113822194	113822194	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116745811	116745811	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152847174	152847174	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161047375	161047375	+	IGR	SNP	C	A	A	rs73162542	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	175696318	175696318	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180042203	180042203	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180042446	180042446	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	184514854	184514854	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192873305	192873305	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31310759	31310759	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35258363	35258363	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	68685740	68685740	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75264571	75264571	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88367130	88367130	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88998867	88998867	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90274868	90274868	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	98378558	98378558	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113659790	113659790	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	115635595	115635595	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	134496303	134496303	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137277381	137277381	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	138369360	138369360	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	4176947	4176947	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43590002	43590002	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	65296632	65296632	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70275384	70275384	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	78003941	78003941	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	81082558	81082558	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	114847929	114847929	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114728	117114728	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117115115	117115115	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	127122122	127122122	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	159675176	159675176	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	161178389	161178389	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	16192401	16192401	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	165455537	165455537	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174386088	174386088	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180552160	180552160	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25911264	25911264	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	31054200	31054200	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066715	40066715	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	41968126	41968127	+	IGR	DNP	CC	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	50571218	50571218	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	55800577	55800577	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56720169	56720169	+	IGR	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	62597618	62597618	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	72448638	72448638	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	74225592	74225592	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77080873	77080873	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	88953082	88953082	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97457330	97457330	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97728201	97728201	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98016368	98016368	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106114576	106114576	+	IGR	SNP	C	A	A	rs148982486	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121702720	121702720	+	IGR	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	138304656	138304656	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	147728011	147728011	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603441	153603442	+	IGR	INS	-	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603827	153603827	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	23972975	23972975	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30437658	30437658	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	42924305	42924305	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50865844	50865844	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	52604498	52604498	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	52735037	52735037	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	58294800	58294800	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80776520	80776520	+	IGR	SNP	G	A	A	rs145441375	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	109638502	109638502	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124117039	124117039	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	128220099	128220099	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	128220108	128220108	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	132854491	132854491	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141587111	141587111	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27531633	27531633	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53070623	53070623	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55003517	55003517	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55327499	55327499	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56636091	56636091	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56804164	56804164	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57233081	57233081	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57245058	57245058	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028278	63028278	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64323779	64323779	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65970329	65970329	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	67828911	67828911	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	79726132	79726132	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	103594409	103594409	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	12561277	12561277	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	128098821	128098821	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	134656939	134656939	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138296178	138296178	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	39717927	39717928	+	IGR	INS	-	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47502929	47502929	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47884296	47884296	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47884444	47884444	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	47886054	47886054	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48069380	48069380	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	4929973	4929973	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653701	50653701	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	54450167	54450167	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	60806485	60806485	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	63056835	63056835	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	70855523	70855523	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73121957	73121957	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	81507948	81507948	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82546690	82546690	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	102067816	102067816	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	10829941	10829941	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109879159	109879159	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109879575	109879575	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	117458535	117458535	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	125329805	125329805	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	134658185	134658185	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	27610443	27610443	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	30689922	30689922	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254201	31254201	+	IGR	DEL	G	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44090168	44090168	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66333613	66333613	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66512989	66512989	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66513359	66513359	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7477116	7477116	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	95683614	95683614	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	120159131	120159131	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	126526478	126526478	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	12863501	12863501	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134738357	134738357	+	IGR	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134743834	134743834	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134772427	134772427	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134815084	134815084	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139114718	139114718	+	IGR	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141263428	141263428	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144713044	144713044	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	146882622	146882622	+	IGR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	14996416	14996417	+	IGR	INS	-	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25047839	25047839	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26178969	26178969	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179755	26179755	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27537095	27537095	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27759658	27759658	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52572844	52572844	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57703719	57703719	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57792898	57792898	+	IGR	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65718924	65718924	+	IGR	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	8751653	8751653	+	IGR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89294206	89294206	+	IGR	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89544697	89544697	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	93891780	93891780	+	IGR	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13524621	13524621	+	IGR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13842660	13842660	+	IGR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP1	6843	broad.mit.edu	37	12	6579803	6579803	+	5'UTR	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155130184	155130184	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155171561	155171561	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	78005902	78005902	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	78005902	78005902	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108307757	108307757	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108307757	108307757	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VDAC3	7419	broad.mit.edu	37	8	42259420	42259420	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZF1	7716	broad.mit.edu	37	17	56058018	56058018	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VGLL3	389136	broad.mit.edu	37	3	86996125	86996125	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VGLL3	389136	broad.mit.edu	37	3	86996125	86996125	+	3'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIM	7431	broad.mit.edu	37	10	17278356	17278356	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51459794	51459794	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPREB1	7441	broad.mit.edu	37	22	22599589	22599589	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPREB1	7441	broad.mit.edu	37	22	22599591	22599591	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPREB1	7441	broad.mit.edu	37	22	22599589	22599589	+	Missense_Mutation	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPREB1	7441	broad.mit.edu	37	22	22599591	22599591	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100514053	100514053	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62212764	62212764	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62312633	62312633	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12374318	12374318	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12374318	12374318	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122723321	122723321	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38834966	38834966	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38834966	38834966	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS45	11311	broad.mit.edu	37	1	150048256	150048256	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4B	9525	broad.mit.edu	37	18	61060776	61060776	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	123988412	123988412	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	123988412	123988412	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2L	402117	broad.mit.edu	37	2	215279129	215279129	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2L	402117	broad.mit.edu	37	2	215279129	215279129	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2	375567	broad.mit.edu	37	7	49842403	49842403	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2	375567	broad.mit.edu	37	7	49842403	49842403	+	Nonsense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61049513	61049513	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61049448	61049448	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177046604	177046604	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177046604	177046604	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR1	9948	broad.mit.edu	37	4	10086176	10086176	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR33	55339	broad.mit.edu	37	2	128471546	128471546	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR33	55339	broad.mit.edu	37	2	128471546	128471546	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74982504	74982504	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74982504	74982504	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36577559	36577559	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241815796	241815796	+	Missense_Mutation	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122396299	122396299	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR67	93594	broad.mit.edu	37	8	124113096	124113096	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR67	93594	broad.mit.edu	37	8	124113096	124113096	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54358470	54358471	+	Frame_Shift_Ins	INS	-	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54358470	54358471	+	Frame_Shift_Ins	INS	-	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC1	58189	broad.mit.edu	37	16	84360462	84360462	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC1	58189	broad.mit.edu	37	16	84360462	84360462	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC3	140686	broad.mit.edu	37	20	44417477	44417477	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC3	140686	broad.mit.edu	37	20	44417477	44417477	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175432512	175432512	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175432512	175432512	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175436880	175436880	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF2	147179	broad.mit.edu	37	17	38430299	38430299	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68624901	68624901	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68624901	68624901	+	Frame_Shift_Del	DEL	A	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	994187	994187	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	994187	994187	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96025976	96025976	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT11	7481	broad.mit.edu	37	11	75902715	75902715	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT11	7481	broad.mit.edu	37	11	75902715	75902715	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT1	7471	broad.mit.edu	37	12	49373271	49373271	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT1	7471	broad.mit.edu	37	12	49373271	49373271	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7B	7477	broad.mit.edu	37	22	46326894	46326894	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT9A	7483	broad.mit.edu	37	1	228109549	228109549	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WTAP	9589	broad.mit.edu	37	6	160164656	160164656	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XAGE5	170627	broad.mit.edu	37	X	52842250	52842250	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XCL1	6375	broad.mit.edu	37	1	168549528	168549528	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31595220	31595220	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31595220	31595220	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106754	168106754	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106754	168106754	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100455915	100455915	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC2	7516	broad.mit.edu	37	7	152373293	152373293	+	5'Flank	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN1	54464	broad.mit.edu	37	3	142089251	142089251	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21346252	21346252	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17232399	17232399	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17232399	17232399	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YLPM1	56252	broad.mit.edu	37	14	75265292	75265292	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YLPM1	56252	broad.mit.edu	37	14	75265292	75265292	+	Nonsense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YPEL2	388403	broad.mit.edu	37	17	57430790	57430790	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135745530	135745530	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAK	51776	broad.mit.edu	37	2	174047508	174047508	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100357998	100357998	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100357998	100357998	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114070842	114070842	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB26	57684	broad.mit.edu	37	9	125682102	125682102	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB32	27033	broad.mit.edu	37	19	36205667	36205667	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB3	79842	broad.mit.edu	37	11	62519745	62519745	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB3	79842	broad.mit.edu	37	11	62519745	62519745	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB8OS	339487	broad.mit.edu	37	1	33097430	33097430	+	Missense_Mutation	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	801198	801198	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	801198	801198	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99212032	99212036	+	Frame_Shift_Del	DEL	CCCAC	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99212032	99212036	+	Frame_Shift_Del	DEL	CCCAC	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC17	23390	broad.mit.edu	37	12	77191179	77191179	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128940465	128940465	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145156847	145156847	+	Nonsense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135620884	135620884	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135620884	135620884	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77617456	77617456	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77620118	77620118	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768223	77768223	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77617456	77617456	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77620118	77620118	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77762558	77762558	+	Silent	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768223	77768223	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP2	80108	broad.mit.edu	37	5	178337440	178337440	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP2	80108	broad.mit.edu	37	5	178358866	178358866	+	Silent	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP36	7538	broad.mit.edu	37	19	39898382	39898382	+	Splice_Site	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP36	7538	broad.mit.edu	37	19	39898382	39898382	+	Splice_Site	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29644964	29644964	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE9	9372	broad.mit.edu	37	1	52628091	52628091	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE9	9372	broad.mit.edu	37	1	52628091	52628091	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC3	7547	broad.mit.edu	37	X	136649681	136649681	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC3	7547	broad.mit.edu	37	X	136649681	136649681	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57649865	57649865	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57649865	57649865	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN4	387032	broad.mit.edu	37	6	28213203	28213203	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND17	118490	broad.mit.edu	37	10	75184559	75184559	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND17	118490	broad.mit.edu	37	10	75186182	75186182	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45848953	45848953	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF100	163227	broad.mit.edu	37	19	21909431	21909431	+	3'UTR	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF142	7701	broad.mit.edu	37	2	219507065	219507065	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF142	7701	broad.mit.edu	37	2	219507065	219507065	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF160	90338	broad.mit.edu	37	19	53572843	53572843	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF160	90338	broad.mit.edu	37	19	53576699	53576699	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF160	90338	broad.mit.edu	37	19	53577535	53577535	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF160	90338	broad.mit.edu	37	19	53578892	53578892	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF165	7718	broad.mit.edu	37	6	28056879	28056879	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF16	7564	broad.mit.edu	37	8	146157923	146157923	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27420806	27420806	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27420806	27420806	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF189	7743	broad.mit.edu	37	9	104171922	104171922	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF189	7743	broad.mit.edu	37	9	104171922	104171922	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF202	7753	broad.mit.edu	37	11	123601254	123601254	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF202	7753	broad.mit.edu	37	11	123601254	123601254	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF222	7673	broad.mit.edu	37	19	44537213	44537213	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44946974	44946974	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF232	7775	broad.mit.edu	37	17	5012590	5012590	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF232	7775	broad.mit.edu	37	17	5012590	5012590	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF248	57209	broad.mit.edu	37	10	38126615	38126615	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF24	7572	broad.mit.edu	37	18	32919719	32919719	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF24	7572	broad.mit.edu	37	18	32919719	32919719	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF254	9534	broad.mit.edu	37	19	24310356	24310356	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF254	9534	broad.mit.edu	37	19	24310356	24310356	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22257840	22257840	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22257840	22257840	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF259	8882	broad.mit.edu	37	11	116649817	116649817	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF259	8882	broad.mit.edu	37	11	116649817	116649817	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF266	10781	broad.mit.edu	37	19	9529243	9529243	+	5'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF266	10781	broad.mit.edu	37	19	9529243	9529243	+	5'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133721120	133721120	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280B	140883	broad.mit.edu	37	22	22843099	22843099	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280B	140883	broad.mit.edu	37	22	22842568	22842568	+	Nonsense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280B	140883	broad.mit.edu	37	22	22843099	22843099	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280D	54816	broad.mit.edu	37	15	56946313	56946313	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF286A	57335	broad.mit.edu	37	17	15607770	15607770	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF300	91975	broad.mit.edu	37	5	150276098	150276098	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF300	91975	broad.mit.edu	37	5	150276098	150276098	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF311	282890	broad.mit.edu	37	6	28963357	28963357	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF311	282890	broad.mit.edu	37	6	28963357	28963357	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF319	57567	broad.mit.edu	37	16	58030897	58030897	+	Frame_Shift_Del	DEL	C	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF330	27309	broad.mit.edu	37	4	142143645	142143645	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF330	27309	broad.mit.edu	37	4	142143645	142143645	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF341	84905	broad.mit.edu	37	20	32354772	32354772	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506897	178506897	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506897	178506897	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64159552	64159552	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64159552	64159552	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72346391	72346391	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF416	55659	broad.mit.edu	37	19	58087249	58087249	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF416	55659	broad.mit.edu	37	19	58087249	58087249	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148802277	148802277	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148802277	148802277	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF473	25888	broad.mit.edu	37	19	50549823	50549823	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF491	126069	broad.mit.edu	37	19	11917571	11917571	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF491	126069	broad.mit.edu	37	19	11917571	11917571	+	Missense_Mutation	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF500	26048	broad.mit.edu	37	16	4802892	4802892	+	Missense_Mutation	SNP	C	A	A	rs75619376	byFrequency;by1000genomes	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62593891	62593891	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF513	130557	broad.mit.edu	37	2	27603003	27603003	+	Missense_Mutation	SNP	G	C	C	rs144091327	byFrequency;by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807148	22807148	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807148	22807148	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF526	116115	broad.mit.edu	37	19	42730041	42730041	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF526	116115	broad.mit.edu	37	19	42730041	42730041	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF532	55205	broad.mit.edu	37	18	56587944	56587944	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57910783	57910783	+	Nonsense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF554	115196	broad.mit.edu	37	19	2832300	2832300	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF554	115196	broad.mit.edu	37	19	2832300	2832300	+	Splice_Site	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF561	93134	broad.mit.edu	37	19	9730039	9730039	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF561	93134	broad.mit.edu	37	19	9730039	9730039	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF607	84775	broad.mit.edu	37	19	38190715	38190715	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF623	9831	broad.mit.edu	37	8	144731985	144731985	+	5'UTR	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF628	89887	broad.mit.edu	37	19	55993190	55993190	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF628	89887	broad.mit.edu	37	19	55993190	55993190	+	Silent	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71632796	71632796	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71632796	71632796	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52394608	52394608	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52394608	52394608	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF668	79759	broad.mit.edu	37	16	31073642	31073642	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363185	22363185	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363185	22363185	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22375949	22375949	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF682	91120	broad.mit.edu	37	19	20118030	20118030	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF692	55657	broad.mit.edu	37	1	249144947	249144947	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF692	55657	broad.mit.edu	37	1	249144947	249144947	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	55990964	55990965	+	Missense_Mutation	DNP	GG	CC	CC			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	55990964	55990965	+	Missense_Mutation	DNP	GG	CC	CC			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57522391	57522392	+	Intron	DNP	CT	AA	AA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF75A	7627	broad.mit.edu	37	16	3367374	3367374	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF777	27153	broad.mit.edu	37	7	149152175	149152176	+	Intron	DEL	CA	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF782	158431	broad.mit.edu	37	9	99581246	99581246	+	Frame_Shift_Del	DEL	G	-	-	rs35483372		TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF782	158431	broad.mit.edu	37	9	99581246	99581246	+	Frame_Shift_Del	DEL	G	-	-	rs35483372		TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF786	136051	broad.mit.edu	37	7	148767407	148767407	+	3'UTR	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF799	90576	broad.mit.edu	37	19	12502558	12502558	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF799	90576	broad.mit.edu	37	19	12502558	12502558	+	Silent	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801543	185801543	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801543	185801543	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57768421	57768421	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57769224	57769224	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF860	344787	broad.mit.edu	37	3	32031984	32031984	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF860	344787	broad.mit.edu	37	3	32032068	32032068	+	Silent	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF93	81931	broad.mit.edu	37	19	20045245	20045245	+	Missense_Mutation	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22604924	22604924	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47886918	47886918	+	Silent	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNRF3	84133	broad.mit.edu	37	22	29438583	29438583	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60636693	60636693	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60636693	60636693	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238050702	238050702	+	Missense_Mutation	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	50023025	50023025	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPBP	11055	broad.mit.edu	37	7	50070956	50070956	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102188083	102188083	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB2	9406	broad.mit.edu	37	1	71534924	71534924	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB3	84083	broad.mit.edu	37	2	136268958	136268958	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN10	84891	broad.mit.edu	37	16	3141885	3141885	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN18	65982	broad.mit.edu	37	19	58598331	58598331	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58565262	58565268	+	Frame_Shift_Del	DEL	CCCGGGA	-	-	rs144536843	byFrequency	TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58565262	58565268	+	Frame_Shift_Del	DEL	CCCGGGA	-	-	rs144536843	byFrequency	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99662084	99662084	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99662084	99662084	+	Silent	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113628618	113628618	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	4012858	4012858	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	104975827	104975827	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134648922	134648922	+	Missense_Mutation	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30998254	30998254	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42949775	42949775	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44983884	44983884	+	RNA	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564966	74564966	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22573837	22573837	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22958412	22958412	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102291998	102291998	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102305061	102305061	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	72901564	72901564	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	78265440	78265440	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22780042	22780042	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	198570051	198570051	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89265822	89265822	+	RNA	SNP	C	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89319697	89319697	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89986729	89986729	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90092025	90092025	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135249261	135249261	+	5'Flank	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142111844	142111845	+	Intron	DEL	GG	-	-			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142190972	142190972	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142216574	142216574	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142334739	142334739	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38407617	38407617	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39894170	39894170	+	RNA	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370764	63370764	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99580996	99580996	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	57390530	57390531	+	Intron	INS	-	C	C			TCGA-67-3771-01A-01D-1040-01	TCGA-67-3771-10A-01D-1040-01			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	104975827	104975827	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30998254	30998254	+	Missense_Mutation	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42947036	42947036	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42949775	42949775	+	Intron	SNP	T	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	44983884	44983884	+	RNA	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45566612	45566612	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49219131	49219131	+	Missense_Mutation	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30921898	30921898	+	RNA	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30953268	30953268	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31115602	31115602	+	Missense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31269953	31269953	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564966	74564966	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22293965	22293980	+	Intron	DEL	CCAAGTGGAGCAGAGT	-	-	rs147582086	by1000genomes	TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22480348	22480349	+	Intron	DNP	GG	TT	TT			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22573837	22573837	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22689801	22689801	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22958412	22958412	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102305061	102305061	+	5'Flank	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20362774	20362774	+	Nonsense_Mutation	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	72901564	72901564	+	5'Flank	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29415194	29415194	+	5'UTR	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33784348	33784348	+	5'Flank	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	78265440	78265440	+	Missense_Mutation	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22780042	22780042	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	227598344	227598344	+	Intron	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89265822	89265822	+	RNA	SNP	C	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89319697	89319697	+	Intron	SNP	G	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89472643	89472643	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89986729	89986729	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89987134	89987135	+	Intron	DNP	TC	CA	CA			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90092025	90092025	+	Intron	SNP	T	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96568695	96568695	+	Intron	SNP	G	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180491313	180491313	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180538353	180538353	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86534997	86534997	+	Intron	SNP	T	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142111844	142111845	+	Intron	DEL	GG	-	-			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142190972	142190972	+	Intron	SNP	A	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142216574	142216574	+	Intron	SNP	A	G	G			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142334739	142334739	+	Intron	SNP	C	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	29555001	29555001	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	38407617	38407617	+	Intron	SNP	G	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39894170	39894170	+	RNA	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63370764	63370764	+	Intron	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99580996	99580996	+	Missense_Mutation	SNP	C	A	A			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	57390530	57390531	+	Intron	INS	-	C	C			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73341897	73341897	+	Intron	SNP	A	T	T			TCGA-67-3771-01A-01W-0928-08	TCGA-67-3771-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
