Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	
ADCY8	114	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	131896886	131896886	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
C17orf75	64149	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	30665271	30665271	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
CDH19	28513	hgsc.bcm.edu;ucsc.edu	37	18	64235860	64235860	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
CDK12	51755	broad.mit.edu;ucsc.edu	37	17	37650846	37650846	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
CERK	64781	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	22	47116101	47116101	+	Silent	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
CNTNAP1	8506	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	40844591	40844591	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
COLEC11	78989	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	3691555	3691555	+	Silent	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
DLGAP1	9229	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	3502638	3502638	+	Silent	SNP	A	A	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ENPEP	2028	broad.mit.edu;ucsc.edu	37	4	111409738	111409745	+	Frame_Shift_Del	DEL	AATCTTTT	-	-	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	AATCTTTT	AATCTTTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ENPP2	5168	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	120569905	120569905	+	Silent	SNP	T	T	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
FAM55D	0	broad.mit.edu;hgsc.bcm.edu	37	11	114451052	114451052	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HELZ	9931	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	65184580	65184580	+	Silent	SNP	T	T	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HHIPL1	84439	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	100129224	100129224	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HLA-F	3134	broad.mit.edu;hgsc.bcm.edu	37	6	29694668	29694668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
IL12RB2	3595	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	67861487	67861487	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
KIAA1024	23251	hgsc.bcm.edu;ucsc.edu	37	15	79749416	79749416	+	Silent	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
LAD1	3898	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	201354881	201354881	+	Missense_Mutation	SNP	C	C	A	rs143101113	alternate_allele	TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
LAD1	3898	broad.mit.edu;ucsc.edu	37	1	201354880	201354880	+	Silent	SNP	T	G	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
LYST	1130	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	235922372	235922372	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
MPHOSPH10	10199	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	71368393	71368393	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
MSH6	2956	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	48032817	48032817	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
MTA3	57504	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	42909669	42909669	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
MUC2	4583	hgsc.bcm.edu	37	11	1093286	1093286	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
NIT2	56954	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	100058770	100058770	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
NRBP1	29959	broad.mit.edu;ucsc.edu	37	2	27663340	27663340	+	Silent	SNP	C	A	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
NUMA1	4926	hgsc.bcm.edu	37	11	71746964	71746965	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
NUP210L	91181	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	154027277	154027277	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
NUP210L	91181	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	154027278	154027278	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
PBRM1	55193	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	52610585	52610585	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
PCNT	5116	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	21	47769001	47769001	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
PPAPDC2	403313	hgsc.bcm.edu	37	9	4662602	4662603	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
PPP1R13B	23368	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	14	104208221	104208222	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
PRIM2	5558	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	57185310	57185310	+	Silent	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
RAPH1	65059	broad.mit.edu;hgsc.bcm.edu	37	2	204356027	204356027	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
RPS3A	6189	broad.mit.edu;hgsc.bcm.edu	37	4	152022142	152022142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
SDR16C5	195814	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	57219234	57219234	+	Splice_Site	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
SFXN5	94097	hgsc.bcm.edu	37	2	73188297	73188298	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
SGCE	8910	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	94257637	94257637	+	Silent	SNP	T	T	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
SGIP1	84251	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	67101650	67101650	+	Silent	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
SMARCA4	6597	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	11098575	11098575	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
TACC2	10579	hgsc.bcm.edu;ucsc.edu	37	10	123844479	123844479	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
TMEM187	8269	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	153247610	153247610	+	Missense_Mutation	SNP	G	G	T	rs139864308	bycluster;byfrequency;by1000genomes	TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
TSC2	7249	broad.mit.edu;hgsc.bcm.edu	37	16	2132493	2132493	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
TTC12	54970	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	113194723	113194723	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
VPS41	27072	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	38816289	38816289	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
YME1L1	10730	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	27431334	27431334	+	Missense_Mutation	SNP	C	C	G	rs143591480		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZBTB26	57684	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	125681478	125681478	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZCCHC2	54877	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	60241796	60241796	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZNF467	168544	hgsc.bcm.edu	37	7	149462196	149462196	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZNF551	90233	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	58198816	58198816	+	Silent	SNP	T	T	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZNF615	284370	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	52496685	52496685	+	Silent	SNP	G	G	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZNF616	90317	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	52618981	52618981	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
ZNF654	55279	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	88189697	88189697	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
AKT3	10000	broad.mit.edu	37	1	243859018	243859018	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
BAT2	0	broad.mit.edu	37	6	31599818	31599818	+	Missense_Mutation	SNP	A	C	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
CROCCL1	0	broad.mit.edu	37	1	16945236	16945239	+	RNA	DEL	TTAT	-	-	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	TTAT	TTAT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
GAS8	2622	broad.mit.edu	37	16	90099333	90099333	+	Splice_Site	SNP	G	A	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HIST1H2AJ	8331	broad.mit.edu	37	6	27782408	27782408	+	Missense_Mutation	SNP	T	G	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HIST2H2BF	440689	broad.mit.edu	37	1	149398908	149398908	+	RNA	SNP	G	C	C	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HMGN2	3151	broad.mit.edu	37	1	26801118	26801118	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
HSP90B1	7184	broad.mit.edu	37	12	104332226	104332226	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
LOC284232	0	broad.mit.edu	37	13	19414102	19414102	+	RNA	SNP	C	T	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
LOC284232	0	broad.mit.edu	37	13	19414287	19414287	+	RNA	SNP	G	T	T	rs4037774	bycluster;byfrequency;by1000genomes	TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
MICALL2	79778	broad.mit.edu	37	7	1487214	1487214	+	Silent	SNP	C	T	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
SLC23A1	9963	broad.mit.edu	37	5	138715429	138715429	+	Missense_Mutation	SNP	G	T	T	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
Unknown	0	broad.mit.edu	37	16	32191961	32191961	+	RNA	SNP	G	A	A	novel		TCGA-A3-3322-01A-01D-0966-08	TCGA-A3-3322-11A-01D-0966-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6f82a369-12e0-4c62-9319-35856c2ef8d5	6a5969e6-52fc-42b9-8b42-41b9da41f6b3	
