Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
ABCB6	10058	genome.wustl.edu	37	2	220082498	220082499	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	2	220082498	220082499	-	T	INS	ABCB6	NM_005689.1	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.581_580	p.V194fs	0.982:0.957	NULL	HMMPfam_ABC_membrane,HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANKRD28	23243	genome.wustl.edu	37	3	15751224	15751225	+	Frame_Shift_Del	DEL	GG	GG	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	GG	GG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	3	15751224	15751225	GG	-	DEL	ANKRD28	NM_015199.2	human	genbank	58_37c	-1	provisional	frame_shift_del	c.1267_1266	p.L423fs	1.000:1.000	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat	-	no_errors
ARG1	383	genome.wustl.edu	37	6	131897807	131897807	+	Missense_Mutation	SNP	G	G	A	rs144994895	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	6	131897807	131897807	G	A	SNP	ARG1	NM_000045.2	human	genbank	58_37c	+1	reviewed	missense	c.62	p.R21Q	1.000	HMMPfam_Arginase,superfamily_Arginase/deacetylase	HMMPfam_Arginase,PatternScan_ARGINASE_1,PatternScan_ARGINASE_2,PatternScan_ARGINASE_3,superfamily_Arginase/deacetylase	-	no_errors
ARHGAP36	0	genome.wustl.edu	37	X	130219991	130219991	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	X	130219991	130219991	G	T	SNP	ARHGAP36	NM_144967.3	human	genbank	58_37c	+1	validated	silent	c.1209	p.L403	0.994	HMMSmart_SM00324,superfamily_GTPase activation domain GAP	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP	-	no_errors
ATM	472	genome.wustl.edu	37	11	108192065	108192065	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	11	108192065	108192065	G	A	SNP	ATM	NM_000051.3	human	genbank	58_37c	+1	reviewed	missense	c.6490	p.E2164K	1.000	HMMPfam_FAT,superfamily_ARM repeat	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FAT,HMMPfam_FATC,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
C14orf145	145508	genome.wustl.edu	37	14	81297497	81297497	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	14	81297497	81297497	G	A	SNP	C14orf145	NM_152446.3	human	genbank	58_37c	-1	validated	missense	c.1199	p.S400L	0.844	NULL	NULL	-	no_errors
C14orf167	0	genome.wustl.edu	37	14	24423284	24423284	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	14	24423284	24423284	G	A	SNP	C14orf167	NR_023921.1	human	genbank	58_37c	-1	validated	rna	NULL	NULL	0.000	-	-	-	no_errors
C15orf33	196951	genome.wustl.edu	37	15	49620836	49620836	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	49620836	49620836	A	T	SNP	C15orf33	NM_152647.2	human	genbank	58_37c	-1	validated	missense	c.1456	p.S486T	0.220	NULL	NULL	-	no_errors
C6orf27	80737	genome.wustl.edu	37	6	31741189	31741189	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	6	31741189	31741189	A	G	SNP	C6orf27	NM_025258.2	human	genbank	58_37c	-1	validated	silent	c.747	p.F249	0.989	NULL	HMMSmart_VWA,superfamily_SSF53300	-	no_errors
CACNA1I	8911	genome.wustl.edu	37	22	40069992	40069992	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	22	40069992	40069992	C	T	SNP	CACNA1I	NM_021096.3	human	genbank	58_37c	+1	reviewed	missense	c.4808	p.T1603I	1.000	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels	-	no_errors
CACNB2	783	genome.wustl.edu	37	10	18787302	18787302	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	10	18787302	18787302	G	A	SNP	CACNB2	NM_201596.2	human	genbank	58_37c	+1	reviewed	missense	c.352	p.A118T	1.000	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain	HMMPfam_Ca_channel_B,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CCR5	1234	genome.wustl.edu	37	3	46415073	46415075	+	Frame_Shift_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	3	46415073	46415075	AGA	-	DEL	CCR5	ENST00000426816	human	ensembl	58_37c	+1	known	frame_shift_del	c.651	p.*217fs	0.263	NULL	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors
CDKN1B	1027	genome.wustl.edu	37	12	12870853	12870853	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	12	12870853	12870853	C	A	SNP	CDKN1B	NM_004064.3	human	genbank	58_37c	+1	reviewed	nonsense	c.80	p.S27*	1.000	NULL	HMMPfam_CDI	-	no_errors
CHM	1121	genome.wustl.edu	37	X	85128090	85128090	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	X	85128090	85128090	A	T	SNP	CHM	NM_000390.2	human	genbank	58_37c	-1	reviewed	missense	c.1737	p.D579E	0.495	superfamily_SSF51905	HMMPfam_GDI,superfamily_SSF51905,superfamily_SSF54373	-	no_errors
CTSE	1510	genome.wustl.edu	37	1	206319212	206319212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	206319212	206319212	G	A	SNP	CTSE	NM_001910.2	human	genbank	58_37c	+1	reviewed	missense	c.337	p.A113T	1.000	HMMPfam_Asp,superfamily_Pept_Aspartic	HMMPfam_Asp,PatternScan_ASP_PROTEASE,superfamily_Pept_Aspartic,HMMPfam_A1_Propeptide	-	no_errors
CYFIP2	26999	genome.wustl.edu	37	5	156747679	156747679	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	5	156747679	156747679	C	G	SNP	CYFIP2	NM_001037332.2	human	genbank	58_37c	+1	validated	missense	c.1540	p.R514G	1.000	HMMPfam_FragX_IP	HMMPfam_FragX_IP	-	no_errors
DYNC1H1	1778	genome.wustl.edu	37	14	102467878	102467878	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	14	102467878	102467878	G	T	SNP	DYNC1H1	NM_001376.4	human	genbank	58_37c	+1	reviewed	nonsense	c.4402	p.E1468*	1.000	HMMPfam_DHC_N2	HMMSmart_AAA,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_SSF52540	-	no_errors
EDC4	23644	genome.wustl.edu	37	16	67911254	67911254	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	16	67911254	67911254	G	A	SNP	EDC4	NM_014329.3	human	genbank	58_37c	+1	validated	missense	c.586	p.D196N	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
FARP2	9855	genome.wustl.edu	37	2	242402858	242402859	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	2	242402858	242402859	-	T	INS	FARP2	NM_014808.2	human	genbank	58_37c	+1	validated	frame_shift_ins	c.1786_1787	p.E596fs	0.995:1.000	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMPfam_PH,HMMSmart_SM00233,HMMPfam_FA,HMMPfam_FERM_N,HMMPfam_FERM_C,PatternScan_FERM_1,HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295,superfamily_PH domain-like,superfamily_Ubiquitin-like	-	no_errors
FEZ1	9638	genome.wustl.edu	37	11	125325768	125325768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	11	125325768	125325768	C	T	SNP	FEZ1	NM_005103.3	human	genbank	58_37c	-1	reviewed	missense	c.902	p.S301N	0.996	NULL	HMMPfam_FEZ	-	no_errors
FMN2	56776	genome.wustl.edu	37	1	240255574	240255574	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	240255574	240255574	C	-	DEL	FMN2	NM_020066.4	human	genbank	58_37c	+1	validated	frame_shift_del	c.165	p.G56fs	0.723	NULL	HMMSmart_FH2,HMMPfam_Drf_FH1,HMMPfam_FH2,superfamily_FH2_actin_bd	-	no_errors
GLE1	2733	genome.wustl.edu	37	9	131296055	131296057	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	GAA	GAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	9	131296055	131296057	GAA	-	DEL	GLE1	NM_001003722.1	human	genbank	58_37c	+1	reviewed	in_frame_del	c.1471_1473	p.E491in_frame_del	1.000:0.995:1.000	HMMPfam_GLE1	HMMPfam_GLE1	-	no_errors
GLE1	2733	genome.wustl.edu	37	9	131296060	131296063	+	Frame_Shift_Del	DEL	GGCC	GGCC	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	GGCC	GGCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	9	131296060	131296063	GGCC	-	DEL	GLE1	NM_001003722.1	human	genbank	58_37c	+1	reviewed	frame_shift_del	c.1476_1479	p.A493fs	1.000:1.000:0.997:1.000	HMMPfam_GLE1	HMMPfam_GLE1	-	no_errors
GP6	51206	genome.wustl.edu	37	19	55543873	55543873	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	55543873	55543873	C	T	SNP	GP6	NM_001083899.1	human	genbank	58_37c	-1	validated	splice_site	c.67+1	e2+1	0.980	-	-	-	no_errors
GRIP2	80852	genome.wustl.edu	37	3	14547204	14547204	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	3	14547204	14547204	C	T	SNP	GRIP2	NM_001080423.1	human	genbank	58_37c	-1	provisional	missense	c.2786	p.R929Q	1.000	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
IFT122	55764	genome.wustl.edu	37	3	129180117	129180117	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	3	129180117	129180117	C	T	SNP	IFT122	NM_052985.2	human	genbank	58_37c	+1	reviewed	nonsense	c.472	p.Q158*	1.000	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
KIF2B	84643	genome.wustl.edu	37	17	51901164	51901164	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	17	51901164	51901164	G	A	SNP	KIF2B	NM_032559.4	human	genbank	58_37c	+1	validated	missense	c.770	p.R257H	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
LAMB3	3914	genome.wustl.edu	37	1	209790889	209790889	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	209790889	209790889	T	A	SNP	LAMB3	NM_000228.2	human	genbank	58_37c	-1	reviewed	missense	c.3094	p.M1032L	0.912	NULL	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMPfam_Laminin_N,HMMSmart_LamNT,superfamily_Gal_bind_like,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196	-	no_errors
LILRA3	11026	genome.wustl.edu	37	19	54803069	54803069	+	Missense_Mutation	SNP	C	C	T	rs147951028	byCluster;byFrequency;by1000genomes	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	54803069	54803069	C	T	SNP	LILRA3	NM_006865.3	human	genbank	58_37c	-1	validated	missense	c.608	p.R203H	0.000	superfamily_SSF48726	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726	-	no_errors
LOC441016	441016	genome.wustl.edu	37	4	54442456	54442456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	4	54442456	54442456	C	T	SNP	LOC441016	XM_496693.4	human	genbank	58_37c	+1	model	missense	c.724	p.P242S	0.126	HMMPfam_HCaRG	HMMPfam_HCaRG	-	no_errors
LRP5L	91355	genome.wustl.edu	37	22	25750714	25750714	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	22	25750714	25750714	C	A	SNP	LRP5L	NM_001135772.1	human	genbank	58_37c	-1	validated	missense	c.504	p.R168S	1.000	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain	-	no_errors
LRRC16B	90668	genome.wustl.edu	37	14	24524512	24524512	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	14	24524512	24524512	G	A	SNP	LRRC16B	NM_138360.3	human	genbank	58_37c	+1	validated	missense	c.598	p.E200K	1.000	superfamily_RNI-like	HMMSmart_SM00368,superfamily_RNI-like	-	no_errors
MAP1A	4130	genome.wustl.edu	37	15	43813948	43813948	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	43813948	43813948	G	A	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	missense	c.277	p.D93N	1.000	superfamily_Metallo-hydrolase/oxidoreductase	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MAP1A	4130	genome.wustl.edu	37	15	43814110	43814110	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	43814110	43814110	G	C	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	missense	c.439	p.D147H	1.000	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MAP1A	4130	genome.wustl.edu	37	15	43814496	43814496	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	43814496	43814496	G	A	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	silent	c.825	p.K275	1.000	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MAP1A	4130	genome.wustl.edu	37	15	43814971	43814971	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	43814971	43814971	G	A	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	missense	c.1300	p.E434K	0.993	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MAP1A	4130	genome.wustl.edu	37	15	43817718	43817718	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	43817718	43817718	G	A	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	silent	c.4047	p.L1349	0.001	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MAP1A	4130	genome.wustl.edu	37	15	43818874	43818874	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	15	43818874	43818874	G	A	SNP	MAP1A	NM_002373.5	human	genbank	58_37c	+1	reviewed	missense	c.5203	p.D1735N	0.970	NULL	superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
MDN1	23195	genome.wustl.edu	37	6	90418279	90418279	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	6	90418279	90418279	C	G	SNP	MDN1	NM_014611.1	human	genbank	58_37c	-1	provisional	missense	c.7834	p.D2612H	1.000	NULL	HMMSmart_SM00327,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_vWA-like	-	no_errors
MED13L	23389	genome.wustl.edu	37	12	116450669	116450669	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	12	116450669	116450669	G	A	SNP	MED13L	NM_015335.3	human	genbank	58_37c	-1	validated	missense	c.1213	p.P405S	0.984	NULL	HMMPfam_TRAP_240kDa	-	no_errors
MLL3	58508	genome.wustl.edu	37	7	151960160	151960160	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	7	151960160	151960160	G	A	SNP	MLL3	NM_170606.2	human	genbank	58_37c	-1	reviewed	missense	c.1240	p.H414Y	1.000	HMMSmart_SM00184,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD	PatternScan_HMGI_Y,HMMPfam_HMG_box,HMMSmart_SM00398,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00184,HMMSmart_SM00249,HMMSmart_SM00508,HMMPfam_FYRN,HMMPfam_FYRC,superfamily_FYVE/PHD zinc finger,HMMPfam_AT_hook,HMMSmart_SM00542,HMMSmart_SM00541,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_ATPASE_ALPHA_BETA,superfamily_SET domain	-	no_errors
MYH7	4625	genome.wustl.edu	37	14	23889445	23889446	+	Splice_Site	INS	-	-	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	14	23889445	23889446	-	G	INS	MYH7	NM_000257.2	human	genbank	58_37c	-1	reviewed	splice_site_ins	c.3337-3_3337-2	e25-2	1.000:0.714	-	-	-	no_errors
MYO1F	4542	genome.wustl.edu	37	19	8615476	8615476	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	8615476	8615476	C	T	SNP	MYO1F	NM_012335.3	human	genbank	58_37c	-1	validated	missense	c.874	p.G292R	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_TH1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYO9B	4650	genome.wustl.edu	37	19	17212961	17212961	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	17212961	17212961	A	G	SNP	MYO9B	NM_004145.3	human	genbank	58_37c	+1	reviewed	missense	c.434	p.Q145R	1.000	HMMSmart_MYSc,superfamily_SSF52540	HMMPfam_IQ,HMMSmart_IQ,HMMPfam_RA,HMMSmart_RA,HMMPfam_RhoGAP,HMMSmart_RhoGAP,HMMPfam_Myosin_head,HMMSmart_MYSc,HMMPfam_C1_1,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_Rho_GAP,superfamily_SSF52540,superfamily_SSF57889	-	no_errors
NCK2	8440	genome.wustl.edu	37	2	106471553	106471553	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	2	106471553	106471553	G	T	SNP	NCK2	NM_001004720.2	human	genbank	58_37c	+1	reviewed	missense	c.34	p.D12Y	1.000	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3	HMMPfam_SH2,HMMSmart_SH2,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,superfamily_SSF55550	-	no_errors
NEK2	4751	genome.wustl.edu	37	1	211848787	211848787	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	211848787	211848787	T	C	SNP	NEK2	NM_002497.2	human	genbank	58_37c	-1	validated	missense	c.35	p.Y12C	0.996	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase	-	no_errors
OTUD4	54726	genome.wustl.edu	37	4	146076763	146076763	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	4	146076763	146076763	A	G	SNP	OTUD4	NM_001102653.1	human	genbank	58_37c	-1	reviewed	missense	c.571	p.Y191H	1.000	NULL	HMMPfam_OTU,superfamily_SSF54001	-	no_errors
PHF6	84295	genome.wustl.edu	37	X	133527637	133527637	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	X	133527637	133527637	G	A	SNP	PHF6	NM_001015877.1	human	genbank	58_37c	+1	reviewed	missense	c.347	p.R116Q	1.000	HMMSmart_SM00249	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178921553	178921553	+	Missense_Mutation	SNP	T	T	A	rs121913284	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	3	178921553	178921553	T	A	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.1035	p.N345K	1.000	HMMSmart_C2,HMMSmart_PI3K_C2,superfamily_C2_CaLB	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors
PQLC2	54896	genome.wustl.edu	37	1	19655106	19655106	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	19655106	19655106	C	T	SNP	PQLC2	NM_001040125.1	human	genbank	58_37c	+1	validated	missense	c.845	p.A282V	0.010	NULL	HMMPfam_PQ-loop,HMMSmart_SM00679	-	no_errors
PRAMEF4	400735	genome.wustl.edu	37	1	12941807	12941807	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	12941807	12941807	C	T	SNP	PRAMEF4	NM_001009611.2	human	genbank	58_37c	-1	validated	missense	c.743	p.R248H	0.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
PSG1	5669	genome.wustl.edu	37	19	43375943	43375943	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	43375943	43375943	C	T	SNP	PSG1	NM_006905.2	human	genbank	58_37c	-1	validated	missense	c.685	p.D229N	0.109	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
RBMXL3	139804	genome.wustl.edu	37	X	114425006	114425006	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	X	114425006	114425006	C	T	SNP	RBMXL3	NM_001145346.1	human	genbank	58_37c	+1	validated	silent	c.1002	p.G334	0.008	NULL	HMMPfam_RRM_1,HMMSmart_RRM,superfamily_SSF54928	-	no_errors
RHBDD2	57414	genome.wustl.edu	37	7	75513141	75513141	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	7	75513141	75513141	G	A	SNP	RHBDD2	NM_001040456.1	human	genbank	58_37c	+1	validated	missense	c.712	p.E238K	0.993	NULL	HMMPfam_Rhomboid	-	no_errors
SIX4	51804	genome.wustl.edu	37	14	61186564	61186564	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	14	61186564	61186564	T	C	SNP	SIX4	NM_017420.4	human	genbank	58_37c	-1	reviewed	missense	c.1463	p.N488S	1.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
SLC4A5	57835	genome.wustl.edu	37	2	74452069	74452069	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	2	74452069	74452069	G	T	SNP	SLC4A5	NM_021196.3	human	genbank	58_37c	-1	reviewed	missense	c.3192	p.H1064Q	0.986	NULL	HMMPfam_HCO3_cotransp,HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein	-	no_errors
SPDYE3	0	genome.wustl.edu	37	7	99912241	99912241	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	7	99912241	99912241	G	A	SNP	SPDYE3	ENST00000332397	human	ensembl	58_37c	+1	known	missense	c.1069	p.E357K	0.061	NULL	NULL	-	no_errors
TLN1	7094	genome.wustl.edu	37	9	35706019	35706019	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	9	35706019	35706019	T	-	DEL	TLN1	NM_006289.3	human	genbank	58_37c	-1	reviewed	frame_shift_del	c.5451	p.A1818fs	0.886	NULL	HMMPfam_I_LWEQ,HMMSmart_ILWEQ,HMMPfam_VBS,HMMPfam_Talin_middle,superfamily_Talin_cent,HMMPfam_FERM_N,PatternScan_FERM_1,PatternScan_FERM_2,HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41,superfamily_SSF109885,superfamily_SSF50729,superfamily_SSF54236	-	no_errors
TMC4	147798	genome.wustl.edu	37	19	54665951	54665951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	54665951	54665951	C	T	SNP	TMC4	NM_001145303.1	human	genbank	58_37c	-1	validated	missense	c.1591	p.E531K	0.990	HMMPfam_TMC	HMMPfam_TMC	-	no_errors
TMEM64	169200	genome.wustl.edu	37	8	91657590	91657598	+	In_Frame_Del	DEL	TGAGCACGA	TGAGCACGA	-	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	TGAGCACGA	TGAGCACGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	8	91657590	91657598	TGAGCACGA	-	DEL	TMEM64	NM_001008495.3	human	genbank	58_37c	-1	validated	in_frame_del	c.544_536	p.IVL179in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_SNARE_assoc	HMMPfam_SNARE_assoc	-	no_errors
TOPBP1	11073	genome.wustl.edu	37	3	133327397	133327397	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	3	133327397	133327397	A	G	SNP	TOPBP1	NM_007027.3	human	genbank	58_37c	-1	reviewed	silent	c.4407	p.I1469	0.986	superfamily_BRCT domain	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain,superfamily_Uteroglobin-like	-	no_errors
TRIM16	10626	genome.wustl.edu	37	17	15554897	15554897	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	17	15554897	15554897	T	G	SNP	ENSG00000251537	ENST00000455584	human	ensembl	58_37c	-1	known	missense	c.71	p.Q24P	0.012	NULL	HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00320,HMMPfam_F-box,HMMSmart_SM00589,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,superfamily_B-box zinc-binding domain,superfamily_F-box domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TTC32	130502	genome.wustl.edu	37	2	20101597	20101597	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	2	20101597	20101597	C	T	SNP	TTC32	NM_001008237.1	human	genbank	58_37c	-1	provisional	missense	c.19	p.E7K	0.000	NULL	HMMPfam_TPR_1,superfamily_SSF48452	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179456109	179456109	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	2	179456109	179456109	C	T	SNP	TTN	ENST00000356127	human	ensembl	58_37c	-1	known	missense	c.52633	p.D17545N	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors
TXNDC12	51060	genome.wustl.edu	37	1	52494264	52494264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	1	52494264	52494264	C	T	SNP	TXNDC12	NM_015913.2	human	genbank	58_37c	-1	provisional	missense	c.197	p.C66Y	1.000	superfamily_Thioredoxin-like,PatternScan_THIOREDOXIN_1	superfamily_Thioredoxin-like,PatternScan_THIOREDOXIN_1	-	no_errors
ZNF534	147658	genome.wustl.edu	37	19	52942200	52942200	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07E-01A-11W-A050-09	TCGA-A8-A07E-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	fa018a20-2c26-4d47-831f-75280b6464df	305efad7-ff5c-4c4a-8f59-2f5fd43710ec	19	52942200	52942200	G	A	SNP	ZNF534	NM_001143939.1	human	genbank	58_37c	+1	validated	missense	c.1526	p.C509Y	0.073	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
