Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error
AHNAK2	113146	genome.wustl.edu	37	14	105413154	105413154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	14	105413154	105413154	G	A	SNP	AHNAK2	NM_138420.2	human	genbank	58_37c	-1	validated	silent	c.8634	p.D2878	0.000	NULL	HMMPfam_Involucrin,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
ALG10B	144245	genome.wustl.edu	37	12	38714107	38714107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	12	38714107	38714107	C	T	SNP	ALG10B	NM_001013620.3	human	genbank	58_37c	+1	validated	missense	c.514	p.H172Y	1.000	HMMPfam_DIE2_ALG10	HMMPfam_DIE2_ALG10	-	no_errors
ANGPT1	284	genome.wustl.edu	37	8	108359214	108359214	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	8	108359214	108359214	G	C	SNP	ANGPT1	NM_001146.3	human	genbank	58_37c	-1	reviewed	missense	c.409	p.Q137E	1.000	NULL	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,PatternScan_FIBRIN_AG_C_DOMAIN,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
ARMCX5	64860	genome.wustl.edu	37	X	101858440	101858440	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	X	101858440	101858440	G	A	SNP	ARMCX5	NM_022838.3	human	genbank	58_37c	+1	validated	silent	c.1371	p.S457	0.001	HMMPfam_DUF634,superfamily_ARM repeat	PatternScan_CPSASE_2,HMMPfam_DUF634,superfamily_ARM repeat	-	no_errors
ARPP21	0	genome.wustl.edu	37	3	35729359	35729359	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	35729359	35729359	C	G	SNP	ARPP21	NM_016300.4	human	genbank	58_37c	+1	validated	missense	c.390	p.I130M	1.000	NULL	HMMPfam_R3H,HMMSmart_SM00393,superfamily_R3H domain	-	no_errors
ATP13A4	84239	genome.wustl.edu	37	3	193185105	193185105	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	193185105	193185105	C	T	SNP	ATP13A4	NM_032279.2	human	genbank	58_37c	-1	validated	missense	c.1114	p.G372R	1.000	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M	HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,PatternScan_ATPASE_E1_E2,superfamily_HAD-like,superfamily_Calcium ATPase transduction domain A,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M	-	no_errors
BOC	91653	genome.wustl.edu	37	3	113004392	113004392	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	113004392	113004392	G	T	SNP	BOC	NM_033254.2	human	genbank	58_37c	+1	validated	missense	c.3137	p.W1046L	0.997	PatternScan_N6_MTASE	PatternScan_N6_MTASE,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_CYTOCHROME_P450,superfamily_Immunoglobulin	-	no_errors
C1orf135	79000	genome.wustl.edu	37	1	26162139	26162139	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	26162139	26162139	G	A	SNP	C1orf135	NM_024037.1	human	genbank	58_37c	-1	provisional	missense	c.419	p.S140F	0.239	NULL	NULL	-	no_errors
C5orf41	153222	genome.wustl.edu	37	5	172537652	172537652	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	172537652	172537652	C	T	SNP	C5orf41	NM_153607.2	human	genbank	58_37c	+1	validated	silent	c.1545	p.V515	1.000	NULL	PatternScan_BZIP_BASIC	-	no_errors
CDH6	1004	genome.wustl.edu	37	5	31305333	31305333	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	31305333	31305333	A	G	SNP	CDH6	NM_004932.2	human	genbank	58_37c	+1	reviewed	missense	c.1052	p.N351S	1.000	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-	no_errors
CDH9	1007	genome.wustl.edu	37	5	26902585	26902585	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	26902585	26902585	T	C	SNP	CDH9	NM_016279.3	human	genbank	58_37c	-1	reviewed	missense	c.1253	p.K418R	1.000	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin	HMMPfam_Cadherin_C,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	-	no_errors
CDK7	1022	genome.wustl.edu	37	5	68551332	68551332	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	68551332	68551332	G	A	SNP	CDK7	NM_001799.3	human	genbank	58_37c	+1	validated	missense	c.274	p.D92N	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
CENPE	1062	genome.wustl.edu	37	4	104080339	104080339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	4	104080339	104080339	G	A	SNP	CENPE	NM_001813.2	human	genbank	58_37c	-1	validated	missense	c.2429	p.S810L	0.000	NULL	PatternScan_AA_TRNA_LIGASE_I,HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
CEP57	9702	genome.wustl.edu	37	11	95552061	95552061	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	95552061	95552061	C	G	SNP	CEP57	NM_014679.3	human	genbank	58_37c	+1	validated	missense	c.692	p.A231G	1.000	HMMPfam_DUF1167	HMMPfam_DUF1167	-	no_errors
CLEC18B	0	genome.wustl.edu	37	16	74451960	74451960	+	Silent	SNP	C	C	T	rs3869429	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	16	74451960	74451960	C	T	SNP	CLEC18B	NM_001011880.2	human	genbank	58_37c	-1	validated	silent	c.453	p.T151	0.578	HMMSmart_SM00198,HMMPfam_SCP,superfamily_PR-1-like	HMMSmart_SM00198,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_SCP,superfamily_PR-1-like,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_errors
CNKSR1	10256	genome.wustl.edu	37	1	26509860	26509860	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	26509860	26509860	G	A	SNP	CNKSR1	NM_006314.2	human	genbank	58_37c	+1	reviewed	silent	c.708	p.Q236	0.940	superfamily_PDZ domain-like	superfamily_PDZ domain-like,HMMSmart_SM00454,HMMPfam_PH,HMMSmart_SM00233,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,HMMPfam_CRIC_ras_sig,superfamily_PH domain-like	-	no_errors
CUX1	1523	genome.wustl.edu	37	7	101844815	101844815	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	7	101844815	101844815	G	A	SNP	CUX1	NM_181552.2	human	genbank	58_37c	+1	reviewed	silent	c.2238	p.L746	0.000	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMPfam_CUT,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains,PatternScan_HOMEOBOX_1	-	no_errors
DCAF4L2	138009	genome.wustl.edu	37	8	88885242	88885242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	8	88885242	88885242	C	T	SNP	DCAF4L2	NM_152418.3	human	genbank	58_37c	-1	validated	missense	c.958	p.V320M	0.976	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
DLGAP4	22839	genome.wustl.edu	37	20	35155390	35155390	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	20	35155390	35155390	G	A	SNP	DLGAP4	NM_014902.4	human	genbank	58_37c	+1	reviewed	missense	c.2926	p.D976N	1.000	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors
DNAH17	8632	genome.wustl.edu	37	17	76472688	76472688	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	17	76472688	76472688	C	G	SNP	DNAH17	ENST00000389840	human	ensembl	58_37c	-1	known	missense	c.8078	p.R2693T	0.042	superfamily_P-loop containing nucleoside triphosphate hydrolases	PatternScan_THIOL_PROTEASE_HIS,HMMPfam_Dynein_heavy,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,PatternScan_WD_REPEATS_1,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DOK5	55816	genome.wustl.edu	37	20	53260054	53260054	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	20	53260054	53260054	C	T	SNP	DOK5	NM_018431.3	human	genbank	58_37c	+1	reviewed	missense	c.793	p.R265C	0.998	NULL	HMMPfam_PH,HMMSmart_SM00233,HMMPfam_IRS,HMMSmart_SM00310,superfamily_PH domain-like	-	no_errors
ECHS1	1892	genome.wustl.edu	37	10	135179586	135179586	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	10	135179586	135179586	C	T	SNP	ECHS1	NM_004092.3	human	genbank	58_37c	-1	reviewed	silent	c.633	p.K211	0.990	HMMPfam_ECH,superfamily_SSF52096	HMMPfam_ECH,PatternScan_ENOYL_COA_HYDRATASE,superfamily_SSF52096	-	no_errors
ENSG00000166787	0	genome.wustl.edu	37	11	18134218	18134218	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	18134218	18134218	C	G	SNP	SAA3P	ENST00000278207	human	ensembl	58_37c	-1	known	missense	c.312	p.Q104H	0.998	HMMPfam_SAA,HMMSmart_SM00197	HMMPfam_SAA,HMMSmart_SM00197	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	3127	3127	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	MT	3127	3127	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	58_37c	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000227087	0	genome.wustl.edu	37	5	79627880	79627880	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	79627880	79627880	C	G	SNP	ENSG00000227087	ENST00000424312	human	ensembl	58_37c	-1	known	5_prime_untranslated_region	c.-79627880	NULL	1.000	-	-	-	no_coding_region:pseudogene
EPHA8	2046	genome.wustl.edu	37	1	22903295	22903295	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	22903295	22903295	G	A	SNP	EPHA8	NM_020526.3	human	genbank	58_37c	+1	reviewed	missense	c.745	p.A249T	1.000	PatternScan_RECEPTOR_TYR_KIN_V_2	HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,HMMPfam_SAM_1,HMMSmart_SAM,HMMPfam_fn3,HMMSmart_FN3,PatternScan_PROTEIN_KINASE_TYR,superfamily_FN_III-like,superfamily_Gal_bind_like,superfamily_SAM_homology,superfamily_Kinase_like,PatternScan_EGF_2,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
GAB3	139716	genome.wustl.edu	37	X	153925488	153925488	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	X	153925488	153925488	G	A	SNP	GAB3	NM_001081573.1	human	genbank	58_37c	-1	reviewed	missense	c.1346	p.S449L	1.000	NULL	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
GRAMD1B	57476	genome.wustl.edu	37	11	123481044	123481044	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	123481044	123481044	C	G	SNP	GRAMD1B	NM_020716.1	human	genbank	58_37c	+1	validated	silent	c.1488	p.L496	1.000	NULL	HMMPfam_GRAM,HMMSmart_SM00568	-	no_errors
GTDC1	79712	genome.wustl.edu	37	2	144764838	144764838	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	2	144764838	144764838	A	G	SNP	GTDC1	NM_001006636.3	human	genbank	58_37c	-1	validated	silent	c.786	p.N262	0.000	NULL	HMMPfam_Glycos_transf_1,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
HPD	3242	genome.wustl.edu	37	12	122284816	122284816	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	12	122284816	122284816	G	A	SNP	HPD	NM_002150.2	human	genbank	58_37c	-1	reviewed	silent	c.783	p.G261	0.000	HMMPfam_Glyoxalase,superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	HMMPfam_Glyoxalase,superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	-	no_errors
IGHV3-6	0	genome.wustl.edu	37	14	106237611	106237611	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	14	106237611	106237611	C	T	SNP	IGHG3	ENST00000390550	human	ensembl	58_37c	-1	known	silent	c.132	p.A44	0.001	HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin	PatternScan_IG_MHC,HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
KCNB2	9312	genome.wustl.edu	37	8	73848476	73848476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	8	73848476	73848476	G	A	SNP	KCNB2	NM_004770.2	human	genbank	58_37c	+1	reviewed	missense	c.886	p.V296M	1.000	HMMPfam_Ion_trans,superfamily_SSF81324	HMMSmart_BTB,HMMPfam_K_tetra,HMMPfam_Kv2channel,HMMPfam_Ion_trans,superfamily_BTB/POZ_fold,superfamily_SSF81324	-	no_errors
KIAA0226	9711	genome.wustl.edu	37	3	197421375	197421375	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	197421375	197421375	C	G	SNP	KIAA0226	NM_001145642.2	human	genbank	58_37c	-1	validated	missense	c.1420	p.E474Q	0.998	NULL	HMMSmart_SM00593	-	no_errors
KIAA0494	9813	genome.wustl.edu	37	1	47183644	47183644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	47183644	47183644	G	A	SNP	KIAA0494	NM_014774.2	human	genbank	58_37c	-1	validated	missense	c.116	p.S39L	1.000	NULL	PatternScan_EF_HAND_1	-	no_errors
KIAA1377	57562	genome.wustl.edu	37	11	101828905	101828905	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	101828905	101828905	A	C	SNP	KIAA1377	NM_020802.2	human	genbank	58_37c	+1	validated	silent	c.513	p.I171	1.000	NULL	NULL	-	no_errors
KIF2A	3796	genome.wustl.edu	37	5	61643923	61643923	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	61643923	61643923	G	A	SNP	KIF2A	NM_001098511.1	human	genbank	58_37c	+1	validated	missense	c.208	p.E70K	1.000	NULL	HMMPfam_Kinesin,HMMSmart_KISc,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors
KIF2C	11004	genome.wustl.edu	37	1	45227643	45227643	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	45227643	45227643	G	C	SNP	KIF2C	NM_006845.3	human	genbank	58_37c	+1	validated	missense	c.1739	p.R580T	1.000	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Kinesin,HMMSmart_SM00129,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KLHL12	59349	genome.wustl.edu	37	1	202862414	202862414	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	202862414	202862414	G	C	SNP	KLHL12	NM_021633.2	human	genbank	58_37c	-1	provisional	missense	c.1533	p.C511W	1.000	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central	HMMSmart_BTB,HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central,superfamily_BTB/POZ_fold,HMMPfam_BACK,HMMPfam_BTB	-	no_errors
LGSN	51557	genome.wustl.edu	37	6	63990178	63990178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	6	63990178	63990178	G	A	SNP	LGSN	NM_016571.2	human	genbank	58_37c	-1	reviewed	silent	c.1278	p.A426	0.103	HMMPfam_Gln-synt_C,superfamily_Glutamine synthetase/guanido kinase	HMMPfam_Gln-synt_C,HMMPfam_Gln-synt_N,superfamily_Glutamine synthetase N-terminal domain,superfamily_Glutamine synthetase/guanido kinase	-	no_errors
LOC100130736	0	genome.wustl.edu	37	15	29906211	29906211	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	15	29906211	29906211	G	C	SNP	LOC100130736	XM_001718646.1	human	genbank	58_37c	+1	model	missense	c.291	p.K97N	1.000	superfamily_Tubulin C-terminal domain-like	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_errors
LRP2BP	55805	genome.wustl.edu	37	4	186291899	186291899	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	4	186291899	186291899	G	A	SNP	LRP2BP	NM_018409.3	human	genbank	58_37c	-1	validated	silent	c.873	p.F291	1.000	superfamily_HCP-like	HMMPfam_Sel1,HMMSmart_SM00671,HMMPfam_TPR_2,superfamily_HCP-like	-	no_errors
LRRK1	79705	genome.wustl.edu	37	15	101549212	101549212	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	15	101549212	101549212	C	T	SNP	LRRK1	NM_024652.3	human	genbank	58_37c	+1	validated	silent	c.933	p.D311	1.000	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like	HMMSmart_SM00219,HMMPfam_LRR_1,HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMSmart_SM00220,HMMSmart_SM00369,superfamily_Protein kinase-like (PK-like),HMMPfam_Miro,HMMPfam_Pkinase,HMMSmart_SM00364,superfamily_L domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MGAM	8972	genome.wustl.edu	37	7	141763364	141763364	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	7	141763364	141763364	G	A	SNP	MGAM	NM_004668.2	human	genbank	58_37c	+1	reviewed	silent	c.4323	p.L1441	0.998	HMMPfam_Glyco_hydro_31	HMMPfam_Glyco_hydro_31,HMMPfam_Trefoil	-	no_errors
MMP3	4314	genome.wustl.edu	37	11	102708128	102708128	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	102708128	102708128	C	G	SNP	MMP3	NM_002422.3	human	genbank	58_37c	-1	reviewed	missense	c.1234	p.D412H	1.000	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120	"superfamily_Hemopexin-like domain,HMMPfam_Peptidase_M10,PatternScan_CYSTEINE_SWITCH,HMMPfam_PG_binding_1,superfamily_PGBD-like,PatternScan_ZINC_PROTEASE,HMMSmart_SM00235,PatternScan_HEMOPEXIN,HMMPfam_Hemopexin,HMMSmart_SM00120,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
MOBKL1A	92597	genome.wustl.edu	37	4	71844867	71844867	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	4	71844867	71844867	C	T	SNP	MOBKL1A	NM_173468.2	human	genbank	58_37c	+1	reviewed	silent	c.432	p.F144	1.000	HMMPfam_Mob1_phocein,superfamily_Mob1/phocein	HMMPfam_Mob1_phocein,superfamily_Mob1/phocein	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9062767	9062767	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	19	9062767	9062767	C	G	SNP	MUC16	NM_024690.2	human	genbank	58_37c	-1	validated	missense	c.24679	p.E8227Q	0.000	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain	-	no_errors
MYBPC1	4604	genome.wustl.edu	37	12	102025811	102025811	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	12	102025811	102025811	G	C	SNP	MYBPC1	NM_002465.2	human	genbank	58_37c	+1	validated	missense	c.451	p.E151Q	1.000	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_I-set,superfamily_Immunoglobulin	-	no_errors
NPC1L1	29881	genome.wustl.edu	37	7	44579387	44579387	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	7	44579387	44579387	G	C	SNP	NPC1L1	NM_013389.2	human	genbank	58_37c	-1	reviewed	silent	c.609	p.L203	1.000	NULL	HMMPfam_Patched,superfamily_SSF82866	-	no_errors
NTRK3	4916	genome.wustl.edu	37	15	88671941	88671941	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	15	88671941	88671941	C	A	SNP	NTRK3	NM_001012338.1	human	genbank	58_37c	-1	reviewed	splice_site	c.1228+1	e9+1	0.993	-	-	-	no_errors
NUP188	23511	genome.wustl.edu	37	9	131721088	131721088	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	9	131721088	131721088	A	C	SNP	NUP188	NM_015354.1	human	genbank	58_37c	+1	validated	missense	c.380	p.D127A	1.000	HMMPfam_Nup188	HMMPfam_Nup188	-	no_errors
PCDH11X	27328	genome.wustl.edu	37	X	91090834	91090834	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	X	91090834	91090834	G	C	SNP	PCDH11X	NM_032968.3	human	genbank	58_37c	+1	reviewed	missense	c.331	p.E111Q	1.000	HMMPfam_Cadherin_2	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,HMMPfam_Protocadherin,superfamily_Cadherin-like	-	no_errors
PCDHGB4	8641	genome.wustl.edu	37	5	140769441	140769441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	140769441	140769441	G	A	SNP	PCDHGB4	NM_003736.2	human	genbank	58_37c	+1	reviewed	missense	c.1990	p.D664N	0.998	HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PDE4C	5143	genome.wustl.edu	37	19	18321933	18321933	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	19	18321933	18321933	C	T	SNP	PDE4C	NM_000923.3	human	genbank	58_37c	-1	validated	missense	c.1945	p.E649K	0.000	superfamily_HD-domain/PDEase-like	HMMPfam_PDEase_I,PatternScan_PDEASE_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like	-	no_errors
PGK1	5230	genome.wustl.edu	37	X	77373596	77373596	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	X	77373596	77373596	G	A	SNP	PGK1	NM_000291.3	human	genbank	58_37c	+1	reviewed	missense	c.570	p.M190I	1.000	HMMPfam_PGK,superfamily_Phosphoglycerate kinase	HMMPfam_PGK,superfamily_Phosphoglycerate kinase,PatternScan_PGLYCERATE_KINASE	-	no_errors
PKP4	8502	genome.wustl.edu	37	2	159481540	159481540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	2	159481540	159481540	G	A	SNP	PKP4	NM_003628.3	human	genbank	58_37c	+1	reviewed	missense	c.754	p.D252N	1.000	NULL	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat	-	no_errors
PODN	127435	genome.wustl.edu	37	1	53544159	53544159	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	53544159	53544159	C	T	SNP	PODN	NM_153703.3	human	genbank	58_37c	+1	validated	missense	c.1121	p.A374V	0.624	superfamily_SSF52047,superfamily_SSF52058	HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52047,superfamily_SSF52058	-	no_errors
PRDM1	639	genome.wustl.edu	37	6	106553664	106553664	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	6	106553664	106553664	C	A	SNP	PRDM1	NM_001198.3	human	genbank	58_37c	+1	reviewed	missense	c.1629	p.S543R	0.067	NULL	HMMPfam_SET,HMMSmart_SET,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667,superfamily_SSF82199	-	no_errors
PRDX1	5052	genome.wustl.edu	37	1	45980571	45980572	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	45980571	45980572	-	A	INS	PRDX1	NM_002574.2	human	genbank	58_37c	-1	reviewed	frame_shift_ins	c.357_356	p.L119fs	1.000:1.000	HMMPfam_AhpC-TSA,superfamily_Thioredoxin-like	HMMPfam_AhpC-TSA,superfamily_Thioredoxin-like,HMMPfam_1-cysPrx_C	-	no_errors
PRKAA1	5562	genome.wustl.edu	37	5	40775557	40775557	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	5	40775557	40775557	A	G	SNP	PRKAA1	NM_206907.3	human	genbank	58_37c	-1	reviewed	silent	c.318	p.Y106	1.000	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors
PRKRIR	5612	genome.wustl.edu	37	11	76063702	76063704	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	76063702	76063704	TTC	-	DEL	PRKRIR	NM_004705.2	human	genbank	58_37c	-1	provisional	in_frame_del	c.492_490	p.E164in_frame_del	0.895:0.999:1.000	NULL	HMMPfam_THAP,HMMSmart_SM00692,HMMPfam_hATC	-	no_errors
R3HDM2	22864	genome.wustl.edu	37	12	57660598	57660598	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	12	57660598	57660598	G	A	SNP	R3HDM2	NM_014925.3	human	genbank	58_37c	-1	validated	silent	c.2005	p.L669	1.000	NULL	HMMPfam_R3H,HMMSmart_SM00393,superfamily_R3H domain	-	no_errors
RBM26	64062	genome.wustl.edu	37	13	79932554	79932554	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	13	79932554	79932554	C	G	SNP	RBM26	NM_022118.3	human	genbank	58_37c	-1	validated	missense	c.1544	p.R515T	1.000	NULL	HMMSmart_RRM,HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMPfam_DUF1777,superfamily_SSF101233,superfamily_SSF54928	-	no_errors
RHOXF2	84528	genome.wustl.edu	37	X	119292962	119292962	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	X	119292962	119292962	G	C	SNP	RHOXF2	NM_032498.1	human	genbank	58_37c	+1	provisional	missense	c.121	p.E41Q	0.000	NULL	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1	-	no_errors
ROD1	9991	genome.wustl.edu	37	9	115030409	115030409	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	9	115030409	115030409	G	C	SNP	ROD1	NM_005156.5	human	genbank	58_37c	-1	validated	missense	c.355	p.P119A	1.000	HMMSmart_SM00360,superfamily_RNA-binding domain RBD	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors
SELP	6403	genome.wustl.edu	37	1	169581514	169581514	+	Missense_Mutation	SNP	G	G	A	rs6124	byCluster;byFrequency	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	169581514	169581514	G	A	SNP	SELP	NM_003005.3	human	genbank	58_37c	-1	reviewed	missense	c.902	p.P301L	0.274	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain	HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_Lectin_C,HMMSmart_SM00034,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement control module/SCR domain,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin	-	no_errors
SENP5	205564	genome.wustl.edu	37	3	196613257	196613257	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	196613257	196613257	A	C	SNP	SENP5	NM_152699.4	human	genbank	58_37c	+1	validated	missense	c.1205	p.Q402P	0.001	NULL	HMMPfam_Peptidase_C48,superfamily_Cysteine proteinases	-	no_errors
SETMAR	6419	genome.wustl.edu	37	3	4355372	4355372	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	4355372	4355372	G	C	SNP	SETMAR	NM_006515.3	human	genbank	58_37c	+1	validated	missense	c.947	p.G316A	0.000	NULL	HMMPfam_SET,HMMSmart_SM00317,HMMPfam_Transposase_1,HMMSmart_SM00468,HMMPfam_Pre-SET,superfamily_SET domain	-	no_errors
SETX	23064	genome.wustl.edu	37	9	135156918	135156918	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	9	135156918	135156918	T	C	SNP	SETX	NM_015046.5	human	genbank	58_37c	-1	reviewed	missense	c.6590	p.H2197R	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SH2D2A	9047	genome.wustl.edu	37	1	156784032	156784032	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	156784032	156784032	G	A	SNP	SH2D2A	NM_003975.3	human	genbank	58_37c	-1	reviewed	silent	c.363	p.F121	1.000	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain	-	no_errors
SH2D2A	9047	genome.wustl.edu	37	1	156784112	156784112	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	156784112	156784112	G	A	SNP	SH2D2A	ENST00000392306	human	ensembl	58_37c	-1	known	missense	c.313	p.R105W	0.001	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	-	no_errors
SPTA1	6708	genome.wustl.edu	37	1	158641868	158641868	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	1	158641868	158641868	C	A	SNP	SPTA1	NM_003126.2	human	genbank	58_37c	-1	reviewed	missense	c.1469	p.S490I	0.993	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_Spectrin,HMMPfam_efhand_Ca_insen,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	17	7578271	7578271	T	C	SNP	TP53	NM_000546.4	human	genbank	58_37c	-1	reviewed	missense	c.578	p.H193R	0.998	superfamily_p53-like transcription factors,HMMPfam_P53	PatternScan_P53,superfamily_p53-like transcription factors,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMPfam_P53,HMMPfam_P53_TAD	-	no_errors
TRIM53L	0	genome.wustl.edu	37	11	89578127	89578127	+	Silent	SNP	G	G	A	rs2175999	byCluster;byFrequency	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	11	89578127	89578127	G	A	SNP	TRIM53B	ENST00000359967	human	ensembl	58_37c	+1	known	silent	c.192	p.L64	0.002	superfamily_SSF57850	HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_RING,PatternScan_ZF_RING_1,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
TRIML1	339976	genome.wustl.edu	37	4	189068190	189068190	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	4	189068190	189068190	C	T	SNP	TRIML1	NM_178556.3	human	genbank	58_37c	+1	provisional	silent	c.1071	p.I357	0.984	HMMPfam_SPRY,HMMSmart_SPRY	HMMSmart_RING,HMMPfam_SPRY,HMMSmart_PRY,PatternScan_ZF_RING_1,HMMSmart_SPRY,HMMPfam_zf-C3HC4,superfamily_SSF57850	-	no_errors
TSHR	7253	genome.wustl.edu	37	14	81609330	81609330	+	Missense_Mutation	SNP	C	C	A	rs121908882	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	14	81609330	81609330	C	A	SNP	TSHR	NM_000369.2	human	genbank	58_37c	+1	reviewed	missense	c.928	p.R310S	1.000	superfamily_L domain-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like	-	no_errors
TYW1B	441250	genome.wustl.edu	37	7	72093976	72093976	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	7	72093976	72093976	G	A	SNP	TYW1B	NM_001145440.1	human	genbank	58_37c	-1	reviewed	nonsense	c.1513	p.R505*	0.987	HMMPfam_Radical_SAM	HMMPfam_Radical_SAM,HMMPfam_Flavodoxin_1,HMMPfam_Wyosine_form,superfamily_Flavoproteins	-	pseudogene
UBA3	9039	genome.wustl.edu	37	3	69113243	69113243	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	3	69113243	69113243	C	G	SNP	UBA3	NM_003968.3	human	genbank	58_37c	-1	reviewed	missense	c.448	p.D150H	1.000	HMMPfam_ThiF,superfamily_Activating enzymes of the ubiquitin-like proteins	HMMPfam_UBACT,HMMPfam_ThiF,superfamily_Activating enzymes of the ubiquitin-like proteins,HMMPfam_E2_bind,PatternScan_UBIQUITIN_ACTIVAT_2	-	no_errors
WDR60	55112	genome.wustl.edu	37	7	158672659	158672659	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	7	158672659	158672659	G	A	SNP	WDR60	NM_018051.4	human	genbank	58_37c	+1	validated	silent	c.858	p.E286	0.264	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
WRAP53	55135	genome.wustl.edu	37	17	7606072	7606072	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	17	7606072	7606072	C	A	SNP	WRAP53	NM_018081.2	human	genbank	58_37c	+1	validated	silent	c.1176	p.L392	0.971	HMMSmart_WD40,superfamily_WD40_like	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
ZFHX4	79776	genome.wustl.edu	37	8	77745629	77745629	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	8	77745629	77745629	G	A	SNP	ZFHX4	ENST00000399468	human	ensembl	58_37c	+1	known	silent	c.3381	p.L1127	0.994	NULL	HMMPfam_Homeobox,HMMSmart_SM00389,HMMSmart_SM00451,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00355,PatternScan_HOMEOBOX_1,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ZNRF4	148066	genome.wustl.edu	37	19	5455667	5455667	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	304a2945-f134-45c7-9eaa-c6c9c2435552	03c46c7b-9609-47ca-8ae5-714ce4a77860	19	5455667	5455667	G	A	SNP	ZNRF4	NM_181710.3	human	genbank	58_37c	+1	validated	silent	c.165	p.P55	0.000	NULL	HMMSmart_SM00184,HMMPfam_PA,PatternScan_EGF_2,HMMPfam_zf-C3HC4,superfamily_Transferrin receptor ectodomain apical domain,superfamily_RING/U-box	-	no_errors
