Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	
AASDHPPT	60496	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	105962108	105962108	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ABCA7	10347	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	1043790	1043790	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ABCA8	10351	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	66878106	66878106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ABCC10	89845	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	43402438	43402438	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ABCF1	23	broad.mit.edu;hgsc.bcm.edu	37	6	30548295	30548295	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
AKNA	80709	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	117106062	117106062	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
AMAC1L2	0	broad.mit.edu;hgsc.bcm.edu	37	8	11188632	11188632	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ANGPTL3	27329	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	63063407	63063407	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ANKRD36B	57730	hgsc.bcm.edu	37	2	98165911	98165912	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ANKS1B	56899	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	99793525	99793525	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ARL13A	392509	hgsc.bcm.edu	37	X	100240888	100240889	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ATXN2L	11273	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	28841977	28841977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
AVIL	10677	hgsc.bcm.edu	37	12	58203422	58203423	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
AXIN2	8313	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	63532473	63532473	+	Silent	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
BAP1	8314	hgsc.bcm.edu;ucsc.edu	37	3	52439219	52439238	+	Frame_Shift_Del	DEL	GCTGCCTGGAGGCTTCACCA	GCTGCCTGGAGGCTTCACCA	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	GCTGCCTGGAGGCTTCACCA	GCTGCCTGGAGGCTTCACCA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
C12orf11	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	27059272	27059272	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
C6orf64	0	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	39073238	39073238	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CAND1	55832	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	67696132	67696132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CAPN6	827	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	110491970	110491970	+	Silent	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CCDC33	80125	broad.mit.edu;ucsc.edu	37	15	74622668	74622668	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CDH2	1000	broad.mit.edu;ucsc.edu	37	18	25591824	25591824	+	Nonsense_Mutation	SNP	G	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CEACAM5	1048	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	42221409	42221409	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
COL16A1	1307	broad.mit.edu;hgsc.bcm.edu	37	1	32149718	32149718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
COL8A1	1295	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	99513362	99513362	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CYB5B	80777	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	69481136	69481136	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CYB5B	80777	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	69481137	69481137	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CYB5B	80777	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	69481138	69481138	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
DCTPP1	79077	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	30435760	30435760	+	Silent	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
DEC1	50514	broad.mit.edu;hgsc.bcm.edu	37	9	118163493	118163493	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
DENND3	22898	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	142178354	142178354	+	Silent	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
EBPL	84650	broad.mit.edu;hgsc.bcm.edu	37	13	50243946	50243946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
EBPL	84650	broad.mit.edu;hgsc.bcm.edu	37	13	50243947	50243947	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
EFCAB5	374786	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	28384816	28384816	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
EPHA7	2045	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	93964470	93964470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
FBXL18	80028	broad.mit.edu;ucsc.edu	37	7	5541300	5541300	+	Silent	SNP	G	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
FETUB	26998	broad.mit.edu;ucsc.edu	37	3	186364117	186364117	+	Silent	SNP	A	T	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
GNS	2799	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	65136922	65136922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
GPX3	2878	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	5	150407548	150407548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
GRAMD1A	57655	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	35501023	35501023	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
GRID1	2894	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	87407078	87407078	+	Silent	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
HERC5	51191	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	4	89385020	89385020	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
HPRT1	3251	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	X	133609298	133609298	+	Missense_Mutation	SNP	C	C	A	rs137852481		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
IL16	3603	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	81601012	81601012	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
INSM2	84684	hgsc.bcm.edu;ucsc.edu	37	14	36005119	36005119	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
JMJD7	100137047	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	42127085	42127085	+	Missense_Mutation	SNP	A	A	G	rs148006565		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
KIAA2018	205717	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	113377055	113377055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
LAMC2	3918	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	183197726	183197726	+	Silent	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
LARP1B	55132	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	4	129043237	129043237	+	Missense_Mutation	SNP	G	G	C	rs142360155	alternate_allele	TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
LDHC	3948	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	18460186	18460186	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
LMO4	8543	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	87805218	87805218	+	Splice_Site	SNP	G	G	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
LPPR4	9890	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	99771434	99771434	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MALAT1	378938	broad.mit.edu;hgsc.bcm.edu	37	11	65273403	65273403	+	RNA	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MMRN2	79812	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	88702115	88702115	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MTUS1	57509	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	17612616	17612616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MUC16	94025	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	9067241	9067241	+	Silent	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MUC16	94025	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	9067242	9067242	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MUC2	4583	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	11	1086012	1086012	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
N4BP2	55728	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	4	40122527	40122527	+	Silent	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
NBAS	51594	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	2	15607839	15607839	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
NR2C2AP	126382	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	19313200	19313200	+	Silent	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
OXSR1	9943	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	38294372	38294372	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
PARS2	25973	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	55224207	55224207	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
PDE4A	5141	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	10568586	10568586	+	Silent	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
PIGU	128869	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	33245016	33245016	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
PIK3R4	30849	hgsc.bcm.edu;ucsc.edu	37	3	130463485	130463487	+	In_Frame_Del	DEL	CTC	CTC	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	CTC	CTC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
PLEKHA4	57664	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	49362923	49362923	+	Silent	SNP	A	A	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
POU6F2	11281	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	7	39247075	39247075	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
PRAMEF4	400735	broad.mit.edu;hgsc.bcm.edu	37	1	12943139	12943139	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
RCCD1	91433	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	91504264	91504264	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
RHOT2	89941	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	16	720301	720301	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SEC23A	10484	broad.mit.edu;hgsc.bcm.edu	37	14	39511999	39511999	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SFXN4	119559	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	120917388	120917388	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_I	WXS	PGM			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SLC16A4	9122	hgsc.bcm.edu;ucsc.edu	37	1	110923620	110923623	+	Frame_Shift_Del	DEL	ATCT	ATCT	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	ATCT	ATCT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SLC22A9	114571	broad.mit.edu;hgsc.bcm.edu	37	11	63175588	63175588	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SLC2A6	11182	hgsc.bcm.edu;ucsc.edu	37	9	136340534	136340534	+	Silent	SNP	G	G	A	rs115835881	bycluster;byfrequency;by1000genomes	TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SPRYD5	0	broad.mit.edu;ucsc.edu	37	11	55653128	55653128	+	Missense_Mutation	SNP	T	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SPTBN4	57731	hgsc.bcm.edu	37	19	41062976	41062977	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TBC1D5	9779	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	17279709	17279709	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TBP	6908	hgsc.bcm.edu;ucsc.edu	37	6	170878701	170878703	+	In_Frame_Del	DEL	GAA	GAA	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	GAA	GAA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TFDP2	7029	hgsc.bcm.edu;ucsc.edu	37	3	141671843	141671843	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	G	-	G	G	Unknown	Valid	Somatic	Phase_I	WXS	PGM			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
THAP10	56906	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	15	71174954	71174954	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
THBS3	7059	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	155170785	155170785	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TIAM2	26230	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	155498049	155498049	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TLL2	7093	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	98273269	98273269	+	Silent	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TNPO2	30000	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	19	12825697	12825697	+	Silent	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TRPV4	59341	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	12	110240804	110240804	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TTC39C	125488	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	18	21694593	21694593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TXN	7295	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	9	113007067	113007067	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
UBA5	79876	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	3	132387698	132387698	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	WXS	PGM			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
UBE4B	10277	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	1	10163026	10163026	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
UBR5	51366	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	103341598	103341598	+	Silent	SNP	A	A	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_I	WXS	454			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
UQCRB	7381	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	97244062	97244062	+	Silent	SNP	T	T	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
VAT1	10493	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	17	41168133	41168133	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
VCPIP1	80124	hgsc.bcm.edu;ucsc.edu	37	8	67546975	67546980	+	In_Frame_Del	DEL	CAACTT	CAACTT	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	CAACTT	CAACTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
WDR11	55717	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	10	122663626	122663626	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
XPO7	23039	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	8	21840307	21840307	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ZC3H18	124245	broad.mit.edu;ucsc.edu	37	16	88696911	88696911	+	Missense_Mutation	SNP	C	T	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ZNF76	7629	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	6	35258122	35258122	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ZNF831	128611	broad.mit.edu;hgsc.bcm.edu;ucsc.edu	37	20	57766296	57766296	+	Silent	SNP	C	C	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MACROD2	140733	ucsc.edu	37	20	15412103	15412103	+	Intron	SNP	A	A	T	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	A	T	A	A	Unknown	Valid	Somatic	.	WXS	PGM	.	.	Illumina HiSeq	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ADM2	79924	broad.mit.edu	37	22	50921276	50921276	+	Missense_Mutation	SNP	G	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
CYP2D7P1	1564	broad.mit.edu	37	22	42538870	42538870	+	Missense_Mutation	SNP	A	C	C	rs2982057	by1000genomes	TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
FCGBP	8857	broad.mit.edu	37	19	40376319	40376319	+	Silent	SNP	G	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
IDUA	3425	broad.mit.edu	37	4	980873	980873	+	Missense_Mutation	SNP	A	G	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
MUC2	4583	broad.mit.edu	37	11	1090371	1090371	+	Missense_Mutation	SNP	C	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
SPATC1	375686	broad.mit.edu	37	8	145096167	145096167	+	Silent	SNP	T	G	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
TM7SF2	7108	broad.mit.edu	37	11	64879505	64879505	+	Frame_Shift_Del	DEL	C	-	-	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
Unknown	0	broad.mit.edu	37	17	76497744	76497744	+	RNA	SNP	T	G	G	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
VHL	7428	broad.mit.edu	37	3	10183864	10183865	+	Frame_Shift_Ins	INS	-	A	A	novel		TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	-	-	-	A	-	-	Unknown	Valid	Somatic	Phase_I	WXS	Illumina Miseq;PacBio			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
ZNF534	147658	broad.mit.edu	37	19	52942411	52942411	+	Silent	SNP	G	A	A	rs113700997	bycluster;byfrequency	TCGA-B0-5075-01A-01D-1462-08	TCGA-B0-5075-11A-01D-1462-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	93237b8e-c9a1-45dd-b160-cfe97e648598	efae71ac-e747-402b-bb95-346f534076cd	
