Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
SAMD11	148398	genome.wustl.edu	37	1	879370	879370	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152486.2	+1	validated	p.P628L	0.132	25	0%	35	22.9%	-	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
CPSF3L	54973	genome.wustl.edu	37	1	1248423	1248423	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017871.4	-1	validated	p.R375W	0.868	37	0%	30	30%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TMEM52	339456	genome.wustl.edu	37	1	1849956	1849956	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000378602	-1	known	p.L14I	0.000	14	0%	38	26.3%	-	-	unknown(0)	-	-	NULL
LRRC47	57470	genome.wustl.edu	37	1	3701714	3701714	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020710.2	-1	validated	p.T377	0.978	130	0%	151	31.8%	-	-	-	-	-	HMMPfam_B3_4
AJAP1	55966	genome.wustl.edu	37	1	4832433	4832433	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001042478.1	+1	validated	p.S337	0.091	77	0%	141	29.1%	-	-	-	-	-	NULL
VAMP3	9341	genome.wustl.edu	37	1	7838211	7838211	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004781.3	+1	reviewed	p.F89I	0.993	261	0%	606	32.8%	-	-	unknown(0)	tolerated(0.49)	-	HMMPfam_Synaptobrevin
PIK3CD	5293	genome.wustl.edu	37	1	9780289	9780289	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005026.3	+1	validated	p.A487T	0.002	19	0%	15	46.7%	-	-	benign(0)	tolerated(0.65)	neutral(0.003)	superfamily_ARM-type_fold
CASZ1	54897	genome.wustl.edu	37	1	10703326	10703326	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001079843.1	-1	validated	p.R1304Q	1.000	87	0%	88	31.8%	-	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
VPS13D	55187	genome.wustl.edu	37	1	12422796	12422796	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015378.2	+1	reviewed	p.R3388*	1.000	226	0%	499	28.1%	-	-	-	-	-	HMMPfam_DUF1162
TMEM82	388595	genome.wustl.edu	37	1	16069585	16069585	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001013641.1	+1	provisional	p.A78T	0.020	79	0%	81	27.2%	-	-	possibly_damaging(0.513)	tolerated(0.31)	neutral(0.199)	NULL
PADI4	23569	genome.wustl.edu	37	1	17672593	17672593	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012387.2	+1	reviewed	p.I336V	0.047	190	0.5%	216	31.5%	-	-	benign(0.006)	tolerated(0.82)	neutral(0.001)	HMMPfam_PAD,superfamily_Pentein
UBR4	23352	genome.wustl.edu	37	1	19419335	19419335	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020765.2	-1	validated	p.A4730D	1.000	53	0%	85	30.6%	-	-	benign(0.18)	deleterious(0.01)	neutral(0.422)	superfamily_ARM repeat
TMCO4	255104	genome.wustl.edu	37	1	20066400	20066400	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_181719.4	-1	validated	p.I366V	1.000	90	0%	94	31.9%	-	-	benign(0.023)	tolerated(0.12)	neutral(0.262)	HMMPfam_DUF726
CNR2	1269	genome.wustl.edu	37	1	24201214	24201214	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001841.2	-1	reviewed	p.I298	0.998	126	0%	217	24.9%	-	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
MAN1C1	57134	genome.wustl.edu	37	1	26109127	26109127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020379.2	+1	validated	p.V568M	1.000	235	0%	402	30.1%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_47,superfamily_Glyco_hydro_47
GJA4	2701	genome.wustl.edu	37	1	35260403	35260403	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002060.2	+1	reviewed	p.D197Y	1.000	123	0%	122	30.3%	-	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC
SH3D21	79729	genome.wustl.edu	37	1	36785948	36785948	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024676.4	+1	validated	p.R208C	0.001	16	0%	38	15.8%	-	-	benign(0.015)	tolerated(0.06)	neutral(0.323)	NULL
KCNQ4	9132	genome.wustl.edu	37	1	41283860	41283860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004700.2	+1	reviewed	p.G144S	1.000	115	0%	130	30%	-	-	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SZT2	23334	genome.wustl.edu	37	1	43898024	43898024	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015284.2	+1	predicted	p.Q887*	1.000	102	0%	162	30.9%	-	-	-	-	-	NULL
IPO13	9670	genome.wustl.edu	37	1	44422099	44422099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014652.3	+1	reviewed	p.R310H	1.000	108	0%	175	28%	-	-	possibly_damaging(0.559)	tolerated(0.2)	neutral(0.239)	superfamily_ARM-type_fold
RNF220	55182	genome.wustl.edu	37	1	44878147	44878147	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018150.2	+1	validated	p.T126	0.484	120	0%	191	34%	-	-	-	-	-	NULL
PRDX1	5052	genome.wustl.edu	37	1	45980598	45980598	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002574.2	-1	reviewed	p.R110	0.954	222	0%	394	23.9%	-	-	-	-	-	HMMPfam_AhpC-TSA,superfamily_Thioredoxin-like
FAAH	2166	genome.wustl.edu	37	1	46871087	46871087	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001441.2	+1	reviewed	p.P163Q	0.173	98	0%	122	37.7%	-	-	benign(0.324)	tolerated(0.15)	neutral(0.343)	HMMPfam_Amidase,superfamily_Amidase_sig_enz
BSND	7809	genome.wustl.edu	37	1	55472943	55472943	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_057176.2	+1	reviewed	p.P182	0.000	95	1.1%	165	27.9%	-	-	-	-	-	NULL
EFCAB7	84455	genome.wustl.edu	37	1	64017408	64017408	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032437.2	+1	validated	p.P320H	0.952	85	0%	282	26.6%	-	-	benign(0.005)	tolerated(0.23)	neutral(0.042)	NULL
DEPDC1	55635	genome.wustl.edu	37	1	68948407	68948407	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001114120.1	-1	validated	p.T362A	0.000	149	0%	484	24.2%	-	-	benign(0.156)	deleterious(0.04)	neutral(0.363)	superfamily_Rho_GAP
FPGT	8790	genome.wustl.edu	37	1	74670088	74670088	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003838.2	+1	reviewed	p.Q119	1.000	28	0%	118	33.1%	-	-	-	-	-	HMMPfam_Fucokinase
PIGK	10026	genome.wustl.edu	37	1	77632457	77632457	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005482.2	-1	reviewed	p.R145Q	0.996	55	0%	125	20.8%	-	-	probably_damaging(0.997)	tolerated(0.09)	deleterious(0.762)	HMMPfam_Peptidase_C13
FUBP1	8880	genome.wustl.edu	37	1	78428607	78428607	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003902.3	-1	reviewed	p.T398fs	1.000	-	-	-	-	-	-	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
LRRC8B	23507	genome.wustl.edu	37	1	90050005	90050005	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001134476.1	+1	validated	p.R599H	1.000	61	0%	158	24.1%	-	-	possibly_damaging(0.685)	deleterious(0.02)	deleterious(0.627)	superfamily_SSF52058
VCAM1	7412	genome.wustl.edu	37	1	101196853	101196853	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001078.2	+1	reviewed	p.R435Q	0.051	72	0%	214	31.3%	-	-	possibly_damaging(0.843)	tolerated(0.42)	neutral(0.337)	HMMPfam_C2-set,superfamily_Immunoglobulin
COL11A1	1301	genome.wustl.edu	37	1	103440430	103440430	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080629.2	-1	reviewed	p.G934*	1.000	77	0%	178	13.5%	-	-	-	-	-	HMMPfam_Collagen
AMY2B	280	genome.wustl.edu	37	1	104114287	104114289	+	In_Frame_Del	DEL	ACA	ACA	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020978.3	+1	reviewed	p.Q23in_frame_del	0.002:0.000:0.000	-	-	-	-	-	-	-	-	-	superfamily_(Trans)glycosidases
CELSR2	1952	genome.wustl.edu	37	1	109795138	109795138	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001408.2	+1	reviewed	p.P813T	1.000	102	0%	135	26.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
GPR61	83873	genome.wustl.edu	37	1	110086806	110086806	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_031936.4	+1	validated	p.T388A	1.000	80	0%	103	11.7%	-	-	possibly_damaging(0.574)	deleterious(0)	deleterious(0.641)	NULL
GNAI3	2773	genome.wustl.edu	37	1	110134773	110134773	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006496.2	+1	validated	p.D328G	1.000	178	0%	351	23.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
HSD3B1	3283	genome.wustl.edu	37	1	120057204	120057204	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000862.2	+1	validated	p.T353M	0.958	104	0%	209	24.4%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_NAD(P)-bd
PDE4DIP	9659	genome.wustl.edu	37	1	144879043	144879043	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014644.4	-1	validated	p.S1469	0.001	102	0%	285	11.2%	-	-	-	-	-	NULL
PIAS3	10401	genome.wustl.edu	37	1	145581451	145581451	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006099.3	+1	reviewed	p.A344	1.000	210	0%	607	17.3%	-	-	-	-	-	HMMPfam_zf-MIZ,superfamily_SSF57850
SV2A	9900	genome.wustl.edu	37	1	149879698	149879698	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014849.3	-1	validated	p.Y480	0.874	156	0%	386	19.2%	-	-	-	-	-	HMMPfam_MFS_1
ADAMTSL4	54507	genome.wustl.edu	37	1	150531616	150531616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_019032.4	+1	reviewed	p.R913L	0.054	29	0%	58	17.2%	-	-	benign(0.011)	tolerated(0.36)	neutral(0.021)	superfamily_TSP-1 type 1 repeat
RIIAD1	284485	genome.wustl.edu	37	1	151701256	151701256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001144956.1	+1	validated	p.P75S	1.000	232	0%	969	17.8%	-	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_RIIa,superfamily_cAMP-dep_prot_kin_reg_I/II_a/b
RORC	6097	genome.wustl.edu	37	1	151785769	151785769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005060.3	-1	reviewed	p.R374C	1.000	248	0%	584	18.8%	-	-	benign(0.412)	deleterious(0)	deleterious(0.578)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
RORC	6097	genome.wustl.edu	37	1	151789697	151789697	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005060.3	-1	reviewed	p.G44R	1.000	149	0%	358	15.4%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
HRNR	388697	genome.wustl.edu	37	1	152193605	152193605	+	Missense_Mutation	SNP	C	C	A	rs12741518	byCluster;byFrequency;by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001009931.1	-1	validated	p.G167V	0.014	121	0%	463	16%	-	-	unknown(0)	-	-	NULL
FLG	2312	genome.wustl.edu	37	1	152282293	152282293	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002016.1	-1	reviewed	p.D1690G	0.061	309	0%	579	16.9%	-	-	unknown(0)	tolerated(0.11)	-	HMMPfam_Filaggrin
LCE3D	84648	genome.wustl.edu	37	1	152552223	152552223	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032563.1	-1	validated	p.R64W	0.076	150	0%	381	15%	-	-	unknown(0)	-	-	NULL
KPRP	448834	genome.wustl.edu	37	1	152733026	152733026	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001025231.1	+1	provisional	p.R321H	0.003	38	0%	104	18.3%	-	-	probably_damaging(0.977)	tolerated(0.15)	deleterious(0.660)	NULL
DENND4B	9909	genome.wustl.edu	37	1	153913034	153913034	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014856.2	-1	validated	p.L459	0.998	64	0%	225	23.1%	-	-	-	-	-	HMMPfam_DENN,HMMSmart_DENN
UBE2Q1	55585	genome.wustl.edu	37	1	154523956	154523956	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017582.6	-1	reviewed	p.A363T	1.000	162	0%	361	15.2%	-	-	possibly_damaging(0.942)	deleterious(0.03)	deleterious(0.752)	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
DCST2	127579	genome.wustl.edu	37	1	155005958	155005958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_144622.2	-1	validated	p.R74C	0.997	34	0%	86	17.4%	-	-	possibly_damaging(0.888)	deleterious(0.04)	deleterious(0.696)	NULL
PKLR	5313	genome.wustl.edu	37	1	155270072	155270072	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000298.5	-1	reviewed	e2-1	1.000	38	0%	86	16.3%	-	-	-	-	-	-
CCT3	7203	genome.wustl.edu	37	1	156280760	156280760	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005998.3	-1	reviewed	p.R461H	1.000	55	0%	136	20.6%	-	-	probably_damaging(0.98)	deleterious(0.01)	deleterious(0.830)	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase
INSRR	3645	genome.wustl.edu	37	1	156813217	156813217	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014215.1	-1	validated	e16+2	1.000	209	0%	427	18.7%	-	-	-	-	-	-
FCRL2	79368	genome.wustl.edu	37	1	157740422	157740422	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_030764.3	-1	reviewed	p.F29	0.734	60	0%	246	16.3%	-	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
OR10K1	391109	genome.wustl.edu	37	1	158435731	158435731	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001004473.1	+1	provisional	p.C127Y	1.000	420	0%	1079	16.4%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
VANGL2	57216	genome.wustl.edu	37	1	160385671	160385671	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020335.1	+1	validated	p.G15D	1.000	40	0%	76	17.1%	-	-	unknown(0)	tolerated(0.71)	-	NULL
ADAMTS4	9507	genome.wustl.edu	37	1	161166610	161166610	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005099.4	-1	reviewed	p.A232T	0.935	163	0%	310	21.3%	-	-	benign(0.018)	tolerated(0.55)	neutral(0.007)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
NDUFS2	4720	genome.wustl.edu	37	1	161182187	161182187	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004550.4	+1	reviewed	p.A345T	0.000	204	0%	482	16.4%	-	-	benign(0)	tolerated(0.46)	neutral(0.012)	HMMPfam_Complex1_49kDa,superfamily_SSF56762
FCGR2A	2212	genome.wustl.edu	37	1	161475295	161475295	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001136219.1	+1	reviewed	p.P13L	0.000	221	0%	584	16.1%	-	-	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	NULL
NOS1AP	9722	genome.wustl.edu	37	1	162337122	162337122	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000454693	+1	known	p.R104C	1.000	40	0%	90	16.7%	-	-	-	-	-	NULL
F5	2153	genome.wustl.edu	37	1	169529941	169529941	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000130.4	-1	reviewed	p.R146Q	0.684	177	0%	565	19.5%	-	-	benign(0)	tolerated(0.8)	neutral(0.001)	superfamily_Cupredoxins
C1orf112	55732	genome.wustl.edu	37	1	169811585	169811588	+	Frame_Shift_Del	DEL	GTAT	GTAT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GTAT	GTAT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018186.2	+1	predicted	p.C586fs	0.128:0.123:0.000:0.166	-	-	-	-	-	-	-	-	-	NULL
FMO2	2327	genome.wustl.edu	37	1	171162632	171162632	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001460.2	+1	reviewed	p.K97N	0.934	34	0%	166	19.9%	-	-	possibly_damaging(0.935)	tolerated(0.43)	neutral(0.394)	HMMPfam_FMO-like,superfamily_SSF51905
C1orf9	51430	genome.wustl.edu	37	1	172543036	172543036	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014283.3	+1	validated	p.V352A	1.000	66	0%	364	15.1%	-	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_Galactose-binding domain-like,HMMPfam_Sad1_UNC
ASTN1	460	genome.wustl.edu	37	1	177001829	177001829	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004319.1	-1	validated	p.G210S	1.000	71	0%	120	20%	-	-	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	NULL
KIAA1614	57710	genome.wustl.edu	37	1	180905683	180905683	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020950.1	+1	validated	p.N880D	0.989	44	0%	120	20%	-	-	possibly_damaging(0.945)	tolerated(0.16)	neutral(0.449)	NULL
CACNA1E	777	genome.wustl.edu	37	1	181680102	181680103	+	Frame_Shift_Del	DEL	AG	AG	-	rs147596634	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000721.2	+1	reviewed	p.R360fs	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
ZNF648	127665	genome.wustl.edu	37	1	182026005	182026005	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001009992.1	-1	provisional	p.R381C	0.567	121	0%	261	20.7%	-	-	benign(0.081)	deleterious(0)	neutral(0.451)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
LAMC1	3915	genome.wustl.edu	37	1	182993092	182993092	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002293.3	+1	reviewed	p.G81R	1.000	22	0%	40	22.5%	-	-	probably_damaging(0.992)	tolerated(0.13)	deleterious(0.700)	HMMPfam_Laminin_N,HMMSmart_LamNT
LAMC1	3915	genome.wustl.edu	37	1	183079641	183079641	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002293.3	+1	reviewed	p.H291	0.697	155	0%	450	11.6%	-	-	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_SSF57196
NCF2	4688	genome.wustl.edu	37	1	183534877	183534877	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000433.3	-1	reviewed	p.P321H	0.993	83	0%	281	23.5%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SH3
PRG4	10216	genome.wustl.edu	37	1	186276623	186276623	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005807.3	+1	reviewed	p.E591G	0.000	221	0%	993	16.3%	-	-	unknown(0)	tolerated(0.1)	-	NULL
TPR	7175	genome.wustl.edu	37	1	186314784	186314784	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003292.2	-1	reviewed	p.V1047	0.217	151	0%	618	18.3%	-	-	-	-	-	superfamily_Prefoldin,HMMPfam_TPR_MLP1_2
TPR	7175	genome.wustl.edu	37	1	186315397	186315397	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003292.2	-1	reviewed	p.N989S	1.000	243	0%	1134	17.8%	-	-	benign(0)	tolerated(0.91)	-	superfamily_Prefoldin
F13B	2165	genome.wustl.edu	37	1	197030981	197030981	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001994.2	-1	reviewed	p.K128	0.014	160	0%	694	16%	-	-	-	-	-	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
ASPM	259266	genome.wustl.edu	37	1	197069862	197069862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018136.4	-1	reviewed	p.A2840D	0.988	50	0%	192	15.6%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CRB1	23418	genome.wustl.edu	37	1	197404611	197404611	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_201253.1	+1	reviewed	p.Y1206	0.938	69	0%	248	18.1%	-	-	-	-	-	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin
KIF14	9928	genome.wustl.edu	37	1	200523689	200523689	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014875.2	-1	validated	p.D1492Y	0.005	98	0%	679	15.8%	-	-	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	NULL
LOC100288349	100288349	genome.wustl.edu	37	1	203311513	203311513	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_002342128.1	+1	model	p.V78I	1.000	37	0%	79	20.3%	-	-	-	-	-	NULL
PLXNA2	5362	genome.wustl.edu	37	1	208217898	208217898	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025179.3	-1	reviewed	p.Q1277*	1.000	185	0%	436	18.6%	-	-	-	-	-	NULL
KCNH1	3756	genome.wustl.edu	37	1	210857206	210857206	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_172362.2	-1	reviewed	p.T796M	1.000	70	0%	146	19.2%	-	-	possibly_damaging(0.931)	tolerated(0.08)	deleterious(0.677)	NULL
PTPN14	5784	genome.wustl.edu	37	1	214557189	214557189	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005401.4	-1	reviewed	p.T670M	0.996	74	0%	120	20.8%	-	-	possibly_damaging(0.816)	deleterious(0.04)	deleterious(0.657)	NULL
DUSP10	11221	genome.wustl.edu	37	1	221912653	221912653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007207.3	-1	reviewed	p.A145V	1.000	246	0.4%	574	18.8%	-	-	benign(0.184)	tolerated(0.11)	neutral(0.289)	superfamily_Rhodanese/Cell cycle control phosphatase
TRIM67	440730	genome.wustl.edu	37	1	231349691	231349691	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001004342.3	+1	validated	p.M752V	1.000	122	0%	254	21.3%	-	-	benign(0)	tolerated(0.05)	neutral(0.345)	HMMPfam_SPRY,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00449
PCNXL2	80003	genome.wustl.edu	37	1	233121996	233121996	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014801.3	-1	provisional	p.T2028A	1.000	27	0%	60	13.3%	-	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
HEATR1	55127	genome.wustl.edu	37	1	236749158	236749158	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018072.4	-1	validated	p.N671D	0.996	92	0%	569	20.4%	-	-	possibly_damaging(0.85)	deleterious(0)	deleterious(0.772)	NULL
MTR	4548	genome.wustl.edu	37	1	237057809	237057809	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000254.2	+1	reviewed	p.D1119	0.309	166	0%	328	15.2%	-	-	-	-	-	HMMPfam_Met_synt_B12,superfamily_Methionine synthase activation domain-like
RYR2	6262	genome.wustl.edu	37	1	237791201	237791201	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001035.2	+1	reviewed	p.L2087	1.000	130	0%	395	15.4%	-	-	-	-	-	NULL
GREM2	64388	genome.wustl.edu	37	1	240656440	240656442	+	In_Frame_Del	DEL	CTT	CTT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_022469.3	-1	reviewed	p.K112in_frame_del	1.000:1.000:0.997	-	-	-	-	-	-	-	-	-	HMMPfam_DAN,HMMSmart_CT
HNRNPU-AS1	284702	genome.wustl.edu	37	1	245006326	245006326	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NR_026778.1	-1	predicted	NULL	0.002	20	0%	258	18.2%	-	-	-	-	-	-
ZNF669	79862	genome.wustl.edu	37	1	247263788	247263788	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024804.2	-1	validated	p.T428I	0.427	236	0%	684	20%	-	-	benign(0.044)	tolerated(0.27)	neutral(0.036)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
OR2L2	26246	genome.wustl.edu	37	1	248201950	248201950	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001004686.2	+1	provisional	p.F127	0.023	185	0%	589	15.6%	-	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR2G6	391211	genome.wustl.edu	37	1	248685338	248685338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001013355.1	+1	validated	p.R131C	0.991	94	0%	221	17.2%	-	-	probably_damaging(0.969)	deleterious(0)	deleterious(0.856)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2T27	403239	genome.wustl.edu	37	1	248813408	248813408	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001001824.1	-1	provisional	p.V260M	0.000	133	0%	369	45.8%	-	-	benign(0.009)	tolerated(1)	neutral(0.001)	HMMPfam_7tm_1,superfamily_SSF81321
PXDN	7837	genome.wustl.edu	37	2	1652913	1652913	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012293.1	-1	validated	p.R880H	1.000	20	0%	22	22.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
PXDN	7837	genome.wustl.edu	37	2	1653182	1653182	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012293.1	-1	validated	p.H790	0.922	102	0%	158	24.1%	-	-	-	-	-	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
KCNS3	3790	genome.wustl.edu	37	2	18112710	18112710	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002252.3	+1	reviewed	p.S145	0.675	98	0%	262	13.4%	-	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21233606	21233606	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000384.2	-1	reviewed	p.A2045V	0.000	167	0%	468	23.3%	-	-	benign(0.037)	-	-	NULL
CENPA	1058	genome.wustl.edu	37	2	27015674	27015674	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001809.3	+1	reviewed	p.Q87	1.000	223	0%	502	26.5%	-	-	-	-	-	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold
KRTCAP3	200634	genome.wustl.edu	37	2	27666007	27666009	+	In_Frame_Del	DEL	CTT	CTT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_173853.3	+1	validated	p.L115in_frame_del	1.000:1.000:0.987	-	-	-	-	-	-	-	-	-	NULL
ZNF512	84450	genome.wustl.edu	37	2	27806577	27806577	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032434.2	+1	validated	p.A28V	1.000	350	0%	862	22.6%	-	-	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	NULL
EHD3	30845	genome.wustl.edu	37	2	31489201	31489201	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014600.2	+1	validated	p.A413	0.019	130	0.8%	229	24.5%	-	-	-	-	-	NULL
GALM	130589	genome.wustl.edu	37	2	38908499	38908499	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_138801.2	+1	reviewed	p.P141	0.301	71	0%	163	22.1%	-	-	-	-	-	HMMPfam_Aldose_epim,superfamily_Galactose mutarotase-like
DYNC2LI1	51626	genome.wustl.edu	37	2	44021769	44021769	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016008.2	+1	validated	p.P165L	0.984	199	0%	711	22.5%	-	-	possibly_damaging(0.537)	tolerated(0.35)	neutral(0.202)	superfamily_P-loop containing nucleoside triphosphate hydrolases
LHCGR	3973	genome.wustl.edu	37	2	48915353	48915353	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000233.3	-1	reviewed	p.I528T	1.000	99	0%	332	19%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FSHR	2492	genome.wustl.edu	37	2	49190931	49190931	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000145.3	-1	reviewed	p.D343	0.917	401	0%	896	20.3%	-	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
NRXN1	9378	genome.wustl.edu	37	2	51254779	51254779	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001135659.1	-1	reviewed	p.S211	0.981	32	0%	32	21.9%	-	-	-	-	-	superfamily_ConA_like_lec_gl
NRXN1	9378	genome.wustl.edu	37	2	51254919	51254919	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001135659.1	-1	reviewed	p.A165T	0.432	44	0%	38	26.3%	-	-	benign(0.002)	tolerated(0.1)	neutral(0.286)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
WDPCP	51057	genome.wustl.edu	37	2	63401823	63401823	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015910.4	-1	validated	p.L687P	0.000	162	0%	554	22.4%	-	-	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
AAK1	22848	genome.wustl.edu	37	2	69736403	69736403	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014911.3	-1	reviewed	p.L656F	1.000	126	0%	309	26.9%	-	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
ATP6V1B1	525	genome.wustl.edu	37	2	71185536	71185536	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001692.3	+1	reviewed	p.P116L	1.000	132	0%	231	18.2%	-	-	probably_damaging(0.954)	deleterious(0.01)	deleterious(0.803)	superfamily_SSF52540
LOXL3	84695	genome.wustl.edu	37	2	74779578	74779578	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032603.2	-1	reviewed	p.R62*	0.989	30	0%	57	26.3%	-	-	-	-	-	HMMPfam_SRCR,HMMSmart_SR,superfamily_Srcr_receptor
DOK1	1796	genome.wustl.edu	37	2	74783889	74783889	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001381.2	+1	reviewed	p.P365H	1.000	62	0%	136	25%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C2orf89	129293	genome.wustl.edu	37	2	85097753	85097753	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080824.1	-1	predicted	p.D89N	1.000	93	0%	214	18.2%	-	-	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	NULL
GNLY	10578	genome.wustl.edu	37	2	85925686	85925686	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006433.3	+1	reviewed	e5-1	0.010	168	0%	410	25.4%	-	-	-	-	-	-
RNF103	7844	genome.wustl.edu	37	2	86839370	86839370	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005667.2	-1	reviewed	p.V132M	1.000	112	0%	415	18.1%	-	-	possibly_damaging(0.519)	deleterious(0)	deleterious(0.619)	NULL
ANKRD36BP2	645784	genome.wustl.edu	37	2	89084442	89084442	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NR_015424.1	+1	predicted	NULL	0.039	19	0%	52	15.4%	-	-	-	-	-	-
CNGA3	1261	genome.wustl.edu	37	2	99013143	99013143	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001298.2	+1	reviewed	p.S504R	1.000	114	0%	240	20%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding
REV1	51455	genome.wustl.edu	37	2	100037995	100037995	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016316.2	-1	reviewed	p.K599	1.000	234	0%	676	21.4%	-	-	-	-	-	HMMPfam_IMS,superfamily_DNA/RNA polymerases
TBC1D8	11138	genome.wustl.edu	37	2	101624478	101624478	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001102426.1	-1	validated	p.A1076	0.002	84	0%	230	24.3%	-	-	-	-	-	NULL
IL18R1	8809	genome.wustl.edu	37	2	103006560	103006562	+	In_Frame_Del	DEL	ATC	ATC	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	ATC	ATC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003855.2	+1	reviewed	p.I333in_frame_del	0.988:0.853:0.005	-	-	-	-	-	-	-	-	-	NULL
UXS1	80146	genome.wustl.edu	37	2	106739433	106739433	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025076.3	-1	validated	p.M246T	1.000	76	0%	204	23%	-	-	benign(0.006)	tolerated(0.06)	neutral(0.323)	HMMPfam_Epimerase,superfamily_NAD(P)-binding Rossmann-fold domains
MERTK	10461	genome.wustl.edu	37	2	112686867	112686867	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006343.2	+1	reviewed	p.V78I	0.000	186	0%	396	20.5%	-	-	possibly_damaging(0.767)	tolerated(0.36)	neutral(0.304)	NULL
MARCO	8685	genome.wustl.edu	37	2	119739002	119739002	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006770.3	+1	reviewed	p.G262C	0.482	75	0%	239	25.5%	-	-	unknown(0)	-	-	NULL
MAP3K2	10746	genome.wustl.edu	37	2	128066248	128066248	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006609.3	-1	reviewed	p.T516fs	1.000	-	-	-	-	-	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
GPR17	2840	genome.wustl.edu	37	2	128408856	128408856	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005291.2	+1	validated	p.Q211E	1.000	86	0%	111	23.4%	-	-	benign(0.215)	tolerated(1)	neutral(0.021)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
POTEF	728378	genome.wustl.edu	37	2	130832557	130832557	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001099771.2	-1	validated	p.P830T	1.000	112	0%	165	26.1%	-	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
MZT2B	80097	genome.wustl.edu	37	2	130940276	130940276	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025029.3	+1	validated	p.Q83*	1.000	49	0%	65	16.9%	-	-	-	-	-	NULL
TMEM163	81615	genome.wustl.edu	37	2	135215636	135215636	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_030923.4	-1	validated	p.L259R	1.000	102	0%	252	23%	-	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
RAB3GAP1	22930	genome.wustl.edu	37	2	135870825	135870825	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012233.2	+1	reviewed	p.L156S	1.000	186	0%	567	22.6%	-	-	possibly_damaging(0.826)	tolerated(0.13)	deleterious(0.566)	NULL
LRP1B	53353	genome.wustl.edu	37	2	141777555	141777555	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018557.2	-1	validated	p.R636W	1.000	92	0%	365	41.6%	-	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Ldl_recept_b,superfamily_SSF63825
NEB	4703	genome.wustl.edu	37	2	152419150	152419150	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004543.4	-1	reviewed	p.R4588Q	0.997	121	0.8%	316	23.7%	-	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Nebulin,HMMSmart_SM00227
CSRNP3	80034	genome.wustl.edu	37	2	166535645	166535645	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024969.3	+1	validated	p.E380	0.978	99	0%	267	22.5%	-	-	-	-	-	NULL
SCN1A	6323	genome.wustl.edu	37	2	166912997	166912997	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006920.4	-1	reviewed	p.L133	1.000	102	0%	392	24.7%	-	-	-	-	-	superfamily_SSF81324
DCAF17	80067	genome.wustl.edu	37	2	172309715	172309715	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025000.3	+1	reviewed	p.N207D	0.994	115	0%	398	25.9%	-	-	benign(0)	-	-	NULL
OSBPL6	114880	genome.wustl.edu	37	2	179201131	179201131	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145739.1	+1	reviewed	p.D233G	1.000	111	0%	272	19.1%	-	-	possibly_damaging(0.763)	deleterious(0.04)	deleterious(0.632)	NULL
TTN	7273	genome.wustl.edu	37	2	179403429	179403429	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000356127	-1	known	p.S30473G	1.000	240	0%	687	24%	-	-	probably_damaging(0.985)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179438798	179438798	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000356127	-1	known	p.R21451	1.000	134	0%	341	19.1%	-	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179526525	179526525	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000392423	-1	known	p.S636P	0.000	29	0%	94	29.8%	-	-	unknown(0)	tolerated(0.33)	-	NULL
TTN	7273	genome.wustl.edu	37	2	179634515	179634515	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_133379.3	-1	reviewed	p.V2931	0.988	138	0%	362	19.6%	-	-	-	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
COL5A2	1290	genome.wustl.edu	37	2	189927763	189927763	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000393.3	-1	reviewed	p.A632	0.999	110	0%	394	19.3%	-	-	-	-	-	HMMPfam_Collagen
SLC39A10	57181	genome.wustl.edu	37	2	196545579	196545579	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001127257.1	+1	validated	p.R271	0.974	112	0%	271	16.6%	-	-	-	-	-	NULL
GTF3C3	9330	genome.wustl.edu	37	2	197657762	197657764	+	In_Frame_Del	DEL	TCC	TCC	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012086.2	-1	provisional	p.E111in_frame_del	0.984:0.986:0.955	-	-	-	-	-	-	-	-	-	NULL
AOX1	316	genome.wustl.edu	37	2	201477429	201477429	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001159.3	+1	reviewed	p.G454D	0.080	144	0%	338	19.2%	-	-	benign(0)	tolerated(0.56)	neutral(0.006)	HMMPfam_CO_deh_flav_C,superfamily_CO dehydrogenase flavoprotein C-terminal domain-like
NRP2	8828	genome.wustl.edu	37	2	206617692	206617692	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_201266.1	+1	reviewed	p.T679	0.000	53	0%	175	21.1%	-	-	-	-	-	HMMPfam_MAM,HMMSmart_SM00137
MAP2	4133	genome.wustl.edu	37	2	210560405	210560405	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002374.3	+1	reviewed	p.V1171M	0.507	57	0%	184	16.8%	-	-	possibly_damaging(0.462)	deleterious(0)	deleterious(0.596)	HMMPfam_MAP2_projctn
MYL1	4632	genome.wustl.edu	37	2	211158526	211158526	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_079420.2	-1	reviewed	e5-2	1.000	176	0%	500	20.2%	-	-	-	-	-	-
ABCA12	26154	genome.wustl.edu	37	2	215831578	215831578	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_173076.2	-1	reviewed	p.R1960*	0.979	246	0%	750	22.9%	-	-	-	-	-	NULL
SLC11A1	6556	genome.wustl.edu	37	2	219254676	219254676	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000578.3	+1	reviewed	p.S293	0.042	179	0%	351	23.6%	-	-	-	-	-	HMMPfam_Nramp
CCDC108	255101	genome.wustl.edu	37	2	219888778	219888778	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_194302.2	-1	provisional	p.T852A	0.000	106	0%	205	14.1%	-	-	benign(0.001)	tolerated(0.72)	neutral(0.002)	superfamily_PapD-like
SLC23A3	151295	genome.wustl.edu	37	2	220029960	220029960	+	Silent	SNP	G	G	A	rs144528370	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001144890.1	-1	validated	p.A374	0.888	30	0%	51	29.4%	-	-	-	-	-	HMMPfam_Xan_ur_permease
CNPPD1	27013	genome.wustl.edu	37	2	220037594	220037594	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015680.4	-1	validated	p.L316P	0.246	50	0%	173	21.4%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ABCB6	10058	genome.wustl.edu	37	2	220080884	220080884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005689.1	-1	reviewed	p.R330H	1.000	66	0%	84	15.5%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
DES	1674	genome.wustl.edu	37	2	220284873	220284873	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001927.3	+1	reviewed	p.R212Q	1.000	172	0.6%	316	28.2%	-	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Filament
OBSL1	23363	genome.wustl.edu	37	2	220422770	220422770	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015311.2	-1	reviewed	p.E1189K	1.000	40	0%	49	16.3%	-	-	probably_damaging(0.993)	deleterious(0.05)	deleterious(0.795)	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726
EPHA4	2043	genome.wustl.edu	37	2	222347180	222347180	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004438.3	-1	reviewed	p.L404I	1.000	237	0%	558	24%	-	-	benign(0.26)	tolerated(0.2)	neutral(0.076)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
CCDC140	151278	genome.wustl.edu	37	2	223168917	223168917	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_153038.1	+1	validated	p.S99L	0.000	47	0%	98	15.3%	-	-	unknown(0)	-	-	NULL
COL4A4	1286	genome.wustl.edu	37	2	227907810	227907810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000092.4	-1	reviewed	p.G1127E	1.000	27	0%	72	31.9%	-	-	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
AGFG1	3267	genome.wustl.edu	37	2	228416726	228416726	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001135187.1	+1	reviewed	p.P501L	1.000	115	0%	292	21.6%	-	-	benign(0.032)	deleterious(0.05)	neutral(0.347)	NULL
ALPI	248	genome.wustl.edu	37	2	233323651	233323651	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001631.3	+1	reviewed	p.R461H	0.998	37	0%	42	23.8%	-	-	probably_damaging(0.995)	tolerated(0.09)	deleterious(0.754)	HMMPfam_Alk_phosphatase,HMMSmart_SM00098,superfamily_Alkaline phosphatase-like
KCNJ13	3769	genome.wustl.edu	37	2	233635683	233635683	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002242.4	-1	reviewed	p.D130	1.000	140	0%	396	25.8%	-	-	-	-	-	HMMPfam_IRK,superfamily_Voltage-gated potassium channels
OTOS	150677	genome.wustl.edu	37	2	241079486	241079486	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_148961.3	-1	validated	p.E26D	0.962	76	0%	179	23.5%	-	-	benign(0)	tolerated(0.39)	neutral(0.016)	NULL
KIF1A	547	genome.wustl.edu	37	2	241662026	241662026	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000431776	-1	known	p.P336L	0.740	25	0%	29	27.6%	-	-	-	-	-	NULL
KIF1A	547	genome.wustl.edu	37	2	241697894	241697894	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004321.4	-1	reviewed	p.R813Q	1.000	94	0%	158	31.6%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CNTN4	152330	genome.wustl.edu	37	3	3076375	3076375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_175607.1	+1	reviewed	p.L615I	1.000	90	0%	187	24.6%	-	-	possibly_damaging(0.681)	deleterious(0.05)	deleterious(0.589)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
LRRN1	57633	genome.wustl.edu	37	3	3887558	3887558	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020873.5	+1	validated	p.K411	0.987	96	0%	209	27.8%	-	-	-	-	-	HMMPfam_LRRCT,HMMSmart_LRRCT,superfamily_SSF52058
BHLHE40	8553	genome.wustl.edu	37	3	5025186	5025186	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003670.2	+1	reviewed	p.V350L	0.004	275	0%	402	27.4%	-	-	benign(0)	tolerated(1)	-	NULL
THRB	7068	genome.wustl.edu	37	3	24169079	24169079	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000461.4	-1	reviewed	p.A352V	1.000	116	0%	240	26.7%	-	-	probably_damaging(0.996)	tolerated(0.38)	deleterious(0.479)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
ITGA9	3680	genome.wustl.edu	37	3	37547525	37547525	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002207.2	+1	reviewed	p.P259	0.000	143	0%	239	28%	-	-	-	-	-	HMMSmart_Int_alpha,superfamily_SSF69318
KBTBD5	131377	genome.wustl.edu	37	3	42727916	42727916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152393.2	+1	validated	p.R269Q	0.996	71	0%	87	25.3%	-	-	benign(0.08)	tolerated(0.16)	neutral(0.065)	NULL
C3orf77	375337	genome.wustl.edu	37	3	44283757	44283757	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001145030.1	+1	validated	p.A71V	0.001	32	0%	41	34.1%	-	-	benign(0.231)	tolerated(0.23)	neutral(0.065)	NULL
FYCO1	79443	genome.wustl.edu	37	3	45996853	45996853	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024513.2	-1	validated	p.A1278T	0.886	123	0%	266	34.2%	-	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
FYCO1	79443	genome.wustl.edu	37	3	46005881	46005881	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024513.2	-1	validated	p.A1072	0.000	128	0%	185	24.9%	-	-	-	-	-	NULL
MAP4	4134	genome.wustl.edu	37	3	47957816	47957816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002375.4	-1	reviewed	p.G501C	0.000	308	0%	457	28.7%	-	-	unknown(0)	deleterious(0)	-	NULL
CDC25A	993	genome.wustl.edu	37	3	48200932	48200932	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001789.2	-1	reviewed	p.R446*	0.912	121	0%	231	27.7%	-	-	-	-	-	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase
WDR6	11180	genome.wustl.edu	37	3	49050943	49050943	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018031.3	+1	reviewed	p.S689L	1.000	279	0%	315	27%	-	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	superfamily_WD40 repeat-like
GRM2	2912	genome.wustl.edu	37	3	51743007	51743007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000839.3	+1	reviewed	p.S3L	0.917	126	0%	127	24.4%	-	-	benign(0.04)	deleterious(0.02)	neutral(0.386)	NULL
FAM116A	201627	genome.wustl.edu	37	3	57614073	57614073	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152678.2	-1	validated	e20-1	1.000	210	0%	336	27.7%	-	-	-	-	-	-
CNTN3	5067	genome.wustl.edu	37	3	74414774	74414774	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020872.1	-1	validated	p.S342	0.972	141	1.4%	253	28.9%	-	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
COL8A1	1295	genome.wustl.edu	37	3	99514394	99514394	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001850.3	+1	reviewed	p.G551fs	0.009	-	-	-	-	-	-	-	-	-	HMMPfam_Collagen
NIT2	56954	genome.wustl.edu	37	3	100067690	100067690	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020202.4	+1	validated	p.T183	0.821	217	0%	407	26.8%	-	-	-	-	-	superfamily_Ntlse/CNhydtse
KIAA1407	57577	genome.wustl.edu	37	3	113775350	113775350	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000483766	-1	known	p.C13S	0.000	88	0%	150	30%	-	-	unknown(0)	-	-	NULL
ZBTB20	26137	genome.wustl.edu	37	3	114070605	114070605	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015642.4	-1	validated	p.T34M	1.000	46	2.2%	54	29.6%	-	-	possibly_damaging(0.898)	deleterious(0)	deleterious(0.799)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
POLQ	10721	genome.wustl.edu	37	3	121178992	121178992	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_199420.3	-1	validated	p.N2353H	1.000	116	0%	217	28.1%	-	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_DNA_pol_A,HMMSmart_SM00482,superfamily_DNA/RNA polymerases
KALRN	8997	genome.wustl.edu	37	3	124352727	124352727	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001024660.3	+1	reviewed	p.P1831R	1.000	144	0%	317	31.9%	-	-	probably_damaging(0.982)	deleterious(0.04)	deleterious(0.775)	NULL
COL6A6	131873	genome.wustl.edu	37	3	130287292	130287292	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001102608.1	+1	provisional	p.G749S	1.000	219	0%	426	27.9%	-	-	benign(0.12)	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
PCCB	5096	genome.wustl.edu	37	3	135979127	135979127	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000468777	+1	known	p.P132H	0.007	12	0%	50	28%	-	-	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_Carboxyl_trans
HLTF	6596	genome.wustl.edu	37	3	148789388	148789388	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003071.3	-1	reviewed	p.H228	0.964	121	0%	558	30.1%	-	-	-	-	-	NULL
CP	1356	genome.wustl.edu	37	3	148927028	148927028	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000096.3	-1	reviewed	p.E251K	0.936	225	0%	590	26.3%	-	-	possibly_damaging(0.525)	tolerated(0.26)	neutral(0.211)	HMMPfam_Cu-oxidase,superfamily_Cupredoxins
TM4SF1	4071	genome.wustl.edu	37	3	149093505	149093505	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014220.2	-1	reviewed	p.G77C	0.989	146	0%	207	12.1%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_L6_membrane
P2RY12	64805	genome.wustl.edu	37	3	151055973	151055973	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_022788.3	-1	reviewed	p.V221I	0.001	77	0%	216	25.9%	-	-	possibly_damaging(0.812)	tolerated(0.46)	neutral(0.318)	HMMPfam_7tm_1,superfamily_SSF81321
MED12L	116931	genome.wustl.edu	37	3	151129263	151129263	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_053002.4	+1	reviewed	p.S2001	0.015	88	0%	161	36.6%	-	-	-	-	-	NULL
MBNL1	4154	genome.wustl.edu	37	3	152018007	152018007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_207293.1	+1	validated	p.R9W	1.000	73	0%	163	16%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SOX2	6657	genome.wustl.edu	37	3	181430802	181430802	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003106.2	+1	reviewed	p.N218	1.000	34	0%	32	28.1%	-	-	-	-	-	NULL
MCF2L2	23101	genome.wustl.edu	37	3	182897208	182897208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015078.2	-1	validated	p.A1102V	0.001	74	0%	118	39%	-	-	possibly_damaging(0.607)	tolerated(0.49)	neutral(0.221)	NULL
DVL3	1857	genome.wustl.edu	37	3	183885769	183885769	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004423.3	+1	reviewed	p.L472	1.000	193	0%	200	31%	-	-	-	-	-	HMMPfam_DEP,HMMSmart_DEP,superfamily_SSF46785
TP63	8626	genome.wustl.edu	37	3	189604298	189604298	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003722.4	+1	reviewed	p.A489T	1.000	152	0%	269	27.5%	-	-	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
HES1	3280	genome.wustl.edu	37	3	193854483	193854483	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005524.2	+1	reviewed	p.L62	1.000	133	0%	302	16.2%	-	-	-	-	-	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
MUC4	4585	genome.wustl.edu	37	3	195512724	195512724	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018406.5	-1	reviewed	p.D1909E	0.000	1260	0%	1902	11%	-	-	possibly_damaging(0.748)	-	-	NULL
MFI2	4241	genome.wustl.edu	37	3	196733446	196733446	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005929.4	-1	reviewed	p.V638M	0.970	139	0%	178	21.9%	-	-	possibly_damaging(0.887)	deleterious(0.04)	deleterious(0.696)	HMMPfam_Transferrin,HMMSmart_SM00094,superfamily_Periplasmic binding protein-like II
TBC1D14	57533	genome.wustl.edu	37	4	6925395	6925395	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001113361.1	+1	validated	p.S93	0.001	32	0%	46	28.3%	-	-	-	-	-	NULL
GPR125	166647	genome.wustl.edu	37	4	22449072	22449072	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145290.2	-1	validated	p.L179S	1.000	18	0%	159	24.5%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_L domain-like
KIAA1239	57495	genome.wustl.edu	37	4	37447374	37447374	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001144990.1	+1	validated	p.A1255V	1.000	68	0%	146	34.2%	-	-	benign(0.135)	tolerated(0.3)	neutral(0.040)	superfamily_WD40_like
KIAA1239	57495	genome.wustl.edu	37	4	37447442	37447442	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001144990.1	+1	validated	p.V1278I	1.000	71	0%	177	16.4%	-	-	possibly_damaging(0.892)	tolerated(0.45)	neutral(0.363)	superfamily_WD40_like
CHRNA9	55584	genome.wustl.edu	37	4	40337853	40337853	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017581.2	+1	reviewed	p.T25M	0.944	213	0%	426	28.9%	-	-	possibly_damaging(0.66)	deleterious(0)	deleterious(0.677)	NULL
CORIN	10699	genome.wustl.edu	37	4	47667181	47667181	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006587.2	-1	reviewed	p.S486F	1.000	108	0%	313	28.1%	-	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_Frizzled cysteine-rich domain,HMMPfam_Fz,HMMSmart_SM00063
ZAR1	326340	genome.wustl.edu	37	4	48496229	48496229	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_175619.1	+1	provisional	p.D415N	1.000	140	0%	255	28.2%	-	-	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
LRRC66	339977	genome.wustl.edu	37	4	52861860	52861860	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001024611.1	-1	provisional	p.R443H	0.001	125	0%	253	23.7%	-	-	benign(0.002)	tolerated(0.22)	neutral(0.042)	NULL
PDGFRA	5156	genome.wustl.edu	37	4	55140718	55140718	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006206.4	+1	reviewed	p.V527M	1.000	329	0%	518	27.6%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PDCL2	132954	genome.wustl.edu	37	4	56448305	56448305	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152401.2	-1	reviewed	p.R36C	1.000	372	0%	727	31.2%	-	-	possibly_damaging(0.732)	tolerated(0.05)	deleterious(0.613)	HMMPfam_Phosducin,superfamily_Thiordxn-like_fd
EXOC1	55763	genome.wustl.edu	37	4	56766049	56766049	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001024924.1	+1	reviewed	p.N779S	1.000	35	0%	183	24.6%	-	-	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_Sec3
UGT2B15	7366	genome.wustl.edu	37	4	69512891	69512891	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001076.2	-1	validated	p.I508M	0.000	230	0%	495	25.5%	-	-	benign(0.004)	deleterious(0.01)	neutral(0.406)	HMMPfam_UDPGT
WDFY3	23001	genome.wustl.edu	37	4	85678244	85678244	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014991.4	-1	reviewed	p.F1753L	1.000	167	0%	342	24.6%	-	-	benign(0.001)	tolerated(0.8)	neutral(0.001)	NULL
KLHL8	57563	genome.wustl.edu	37	4	88091730	88091730	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020803.3	-1	validated	p.Y416H	1.000	87	0%	197	32%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
KLHL8	57563	genome.wustl.edu	37	4	88099656	88099656	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020803.3	-1	validated	p.R357*	1.000	130	1.5%	365	30.1%	-	-	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
HSD17B11	51170	genome.wustl.edu	37	4	88303471	88303471	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016245.3	-1	validated	p.A85V	0.993	176	0%	354	26.8%	-	-	benign(0.005)	tolerated(0.16)	neutral(0.059)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
ATOH1	474	genome.wustl.edu	37	4	94750131	94750131	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005172.1	+1	reviewed	p.D18	1.000	30	0%	44	27.3%	-	-	-	-	-	NULL
ENPEP	2028	genome.wustl.edu	37	4	111397917	111397917	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001977.3	+1	validated	p.T116fs	0.683	-	-	-	-	-	-	-	-	-	HMMPfam_Peptidase_M1,superfamily_Leukotriene A4 hydrolase N-terminal domain
TNIP3	79931	genome.wustl.edu	37	4	122071336	122071336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001128843.1	-1	validated	p.S177	0.000	134	0%	298	29.2%	-	-	-	-	-	NULL
EXOSC9	5393	genome.wustl.edu	37	4	122723901	122723901	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001034194.1	+1	validated	p.F78L	1.000	117	0%	409	30.3%	-	-	benign(0.035)	tolerated(0.06)	neutral(0.325)	HMMPfam_RNase_PH,superfamily_Ribosomal_S5_D2-typ_fold
PCDH10	57575	genome.wustl.edu	37	4	134071459	134071459	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032961.1	+1	reviewed	p.T55M	1.000	83	0%	154	24.7%	-	-	possibly_damaging(0.913)	tolerated(0.13)	deleterious(0.617)	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
OTUD4	54726	genome.wustl.edu	37	4	146064538	146064538	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001102653.1	-1	reviewed	p.E489	0.999	152	0%	366	23.8%	-	-	-	-	-	NULL
TTC29	83894	genome.wustl.edu	37	4	147858772	147858772	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_031956.2	-1	validated	p.K50N	1.000	148	0%	395	31.4%	-	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
TLL1	7092	genome.wustl.edu	37	4	166915626	166915626	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012464.3	+1	reviewed	p.R152T	1.000	80	0%	241	29.5%	-	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	"superfamily_Metalloproteases (""zincins"") catalytic domain"
TLL1	7092	genome.wustl.edu	37	4	166915627	166915627	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012464.3	+1	reviewed	p.R152S	1.000	82	0%	241	29.5%	-	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	"superfamily_Metalloproteases (""zincins"") catalytic domain"
HELT	391723	genome.wustl.edu	37	4	185941873	185941873	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001029887.1	+1	provisional	p.A311T	0.851	40	0%	37	24.3%	-	-	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
ADCY2	108	genome.wustl.edu	37	5	7520914	7520914	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020546.2	+1	reviewed	p.A158T	1.000	193	0%	278	31.3%	-	-	probably_damaging(0.953)	tolerated(0.13)	deleterious(0.649)	NULL
MARCH6	10299	genome.wustl.edu	37	5	10391780	10391782	+	In_Frame_Del	DEL	GAC	GAC	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GAC	GAC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005885.2	+1	provisional	p.D235in_frame_del	1.000:1.000:0.996	-	-	-	-	-	-	-	-	-	NULL
DNAH5	1767	genome.wustl.edu	37	5	13736026	13736026	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001369.2	-1	reviewed	p.S3824N	1.000	62	0%	122	31.1%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZSWIM6	57688	genome.wustl.edu	37	5	60768594	60768594	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020928.1	+1	provisional	p.C255S	1.000	127	0%	221	29%	-	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_SWIM
PIK3R1	5295	genome.wustl.edu	37	5	67591111	67591137	+	In_Frame_Del	DEL	AGACCTTATCCAGCTGAGAAAGACGAG	AGACCTTATCCAGCTGAGAAAGACGAG	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	AGACCTTATCCAGCTGAGAAAGACGAG	AGACCTTATCCAGCTGAGAAAGACGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_181523.1	+1	reviewed	p.LIQLRKTRD570in_frame_del	0.152:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.996:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:0.016:0.975:1.000	-	-	-	-	-	-	-	-	-	NULL
ZNF366	167465	genome.wustl.edu	37	5	71743089	71743089	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152625.1	-1	provisional	p.E560	0.925	203	0%	403	29.8%	-	-	-	-	-	NULL
ZNF366	167465	genome.wustl.edu	37	5	71756629	71756629	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152625.1	-1	provisional	p.V232A	1.000	147	0%	205	26.8%	-	-	probably_damaging(0.972)	deleterious(0.04)	deleterious(0.763)	NULL
BTF3	689	genome.wustl.edu	37	5	72798825	72798825	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001037637.1	+1	reviewed	p.I134V	1.000	57	0%	94	31.9%	-	-	benign(0.006)	tolerated(0.6)	neutral(0.004)	HMMPfam_NAC
MAN2A1	4124	genome.wustl.edu	37	5	109153095	109153095	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002372.2	+1	reviewed	p.A689T	1.000	178	0%	370	28.6%	-	-	possibly_damaging(0.68)	tolerated(0.21)	neutral(0.286)	superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C
FTMT	94033	genome.wustl.edu	37	5	121187726	121187726	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_177478.1	+1	validated	p.R23H	0.000	13	0%	18	50%	-	-	possibly_damaging(0.593)	deleterious(0.05)	deleterious(0.550)	NULL
SEC24A	10802	genome.wustl.edu	37	5	134002682	134002682	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021982.1	+1	validated	p.Q245	1.000	75	0%	139	19.4%	-	-	-	-	-	NULL
NDUFA2	4695	genome.wustl.edu	37	5	140026926	140026926	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002488.4	-1	reviewed	p.Y41	0.788	130	0%	199	34.7%	-	-	-	-	-	HMMPfam_L51_S25_CI-B8
ZMAT2	153527	genome.wustl.edu	37	5	140085390	140085391	+	Frame_Shift_Ins	INS	-	-	GT	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000515493	+1	known	p.C158fs	0.977:0.999	-	-	-	-	-	-	-	-	-	NULL
PCDHA3	56145	genome.wustl.edu	37	5	140182337	140182337	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018906.2	+1	reviewed	p.A519T	0.998	76	0%	70	17.1%	-	-	possibly_damaging(0.936)	deleterious(0)	deleterious(0.826)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA3	56145	genome.wustl.edu	37	5	140182638	140182638	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018906.2	+1	reviewed	p.R619H	0.945	125	0%	110	32.7%	-	-	benign(0.074)	tolerated(0.09)	neutral(0.301)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHB12	56124	genome.wustl.edu	37	5	140590646	140590646	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018932.3	+1	reviewed	p.G723C	0.000	45	0%	98	21.4%	-	-	probably_damaging(0.997)	deleterious(0.04)	deleterious(0.815)	NULL
PCDHB18	54660	genome.wustl.edu	37	5	140615334	140615334	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000274705	+1	known	p.L350R	0.228	56	0%	85	27.1%	-	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHGB6	56100	genome.wustl.edu	37	5	140789345	140789345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018926.2	+1	reviewed	p.R526C	0.989	27	0%	35	28.6%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA10	56106	genome.wustl.edu	37	5	140794355	140794355	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018913.2	+1	reviewed	p.A538V	0.998	229	0%	256	31.2%	-	-	possibly_damaging(0.715)	tolerated(0.11)	deleterious(0.530)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA12	26025	genome.wustl.edu	37	5	140812048	140812048	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003735.2	+1	reviewed	p.G574	0.223	82	0%	96	20.8%	-	-	-	-	-	superfamily_Cadherin-like
SPINK5	11005	genome.wustl.edu	37	5	147513446	147513446	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001127698.1	+1	reviewed	p.P1091L	0.000	121	0%	239	23.4%	-	-	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
HTR4	3360	genome.wustl.edu	37	5	147889472	147889472	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001040173.2	-1	reviewed	p.M208T	1.000	184	0%	332	27.7%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
TNIP1	10318	genome.wustl.edu	37	5	150425460	150425460	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006058.3	-1	validated	p.E300K	0.994	126	0%	175	31.4%	-	-	benign(0.315)	tolerated(0.06)	neutral(0.421)	NULL
CYFIP2	26999	genome.wustl.edu	37	5	156741377	156741377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001037332.2	+1	validated	p.S379N	1.000	99	0%	144	31.9%	-	-	benign(0.001)	tolerated(0.5)	neutral(0.010)	HMMPfam_FragX_IP
CYFIP2	26999	genome.wustl.edu	37	5	156788557	156788557	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001037332.2	+1	validated	p.R997M	1.000	139	0%	258	17.8%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FragX_IP
ATP10B	23120	genome.wustl.edu	37	5	160033864	160033864	+	Missense_Mutation	SNP	C	C	T	rs184625643	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025153.2	-1	validated	p.R1023Q	1.000	127	0%	216	25.5%	-	-	possibly_damaging(0.905)	tolerated(0.36)	neutral(0.380)	superfamily_HAD-like
TLX3	30012	genome.wustl.edu	37	5	170738524	170738524	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021025.2	+1	provisional	p.S266L	1.000	67	0%	75	28%	-	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
FBXW11	23291	genome.wustl.edu	37	5	171303394	171303394	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012300.2	-1	reviewed	p.T351	0.001	117	0%	166	13.3%	-	-	-	-	-	superfamily_WD40 repeat-like
B4GALT7	11285	genome.wustl.edu	37	5	177031305	177031305	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007255.2	+1	reviewed	p.R59Q	0.002	13	0%	15	40%	-	-	benign(0)	tolerated(0.64)	neutral(0.003)	HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases
PROP1	5626	genome.wustl.edu	37	5	177419920	177419920	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006261.4	-1	reviewed	p.Y157	0.068	448	0%	688	28.3%	-	-	-	-	-	NULL
BTNL8	79908	genome.wustl.edu	37	5	180335654	180335654	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001040462.2	+1	validated	p.C40R	0.061	179	0.6%	247	30.4%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
NRSN1	140767	genome.wustl.edu	37	6	24146106	24146106	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000378477	+1	known	e2+2	1.000	78	0%	200	23.5%	-	-	-	-	-	-
KIAA0319	9856	genome.wustl.edu	37	6	24596139	24596139	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014809.3	-1	reviewed	p.Q255*	0.060	156	0%	209	33.5%	-	-	-	-	-	NULL
HIST1H2AD	3013	genome.wustl.edu	37	6	26199364	26199364	+	Silent	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021065.2	-1	reviewed	p.R36	0.995	93	0%	144	30.6%	-	-	-	-	-	HMMSmart_H2A,HMMPfam_Histone,superfamily_Histone-fold
HIST1H2AG	8969	genome.wustl.edu	37	6	27101200	27101200	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021064.4	+1	reviewed	p.L117P	1.000	175	0%	260	24.2%	-	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMSmart_SM00414,superfamily_Histone-fold
PACSIN1	29993	genome.wustl.edu	37	6	34499432	34499432	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020804.2	+1	validated	p.S365R	1.000	31	0%	51	27.5%	-	-	benign(0.123)	deleterious(0.04)	neutral(0.359)	NULL
LHFPL5	222662	genome.wustl.edu	37	6	35773479	35773479	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182548.3	+1	reviewed	p.A11V	1.000	129	0%	111	19.8%	-	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
COX6A1P2	285849	genome.wustl.edu	37	6	37012697	37012697	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000423336	+1	known	p.G21A	0.428	71	0%	90	26.7%	-	-	benign(0.003)	tolerated(0.57)	neutral(0.006)	NULL
FOXP4	116113	genome.wustl.edu	37	6	41557716	41557716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001012426.1	+1	reviewed	p.G389S	0.863	63	0%	111	38.7%	-	-	benign(0)	tolerated(1)	-	NULL
PRICKLE4	29964	genome.wustl.edu	37	6	41751967	41751967	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013397.5	+1	validated	p.Q77H	0.999	226	0%	365	23.3%	-	-	probably_damaging(1)	tolerated(0.39)	deleterious(0.516)	HMMPfam_PET
CUL9	23113	genome.wustl.edu	37	6	43180997	43180997	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015089.2	+1	validated	p.Q1775*	1.000	167	0%	212	29.2%	-	-	-	-	-	HMMPfam_Cullin,superfamily_Cullin homology domain
CUL9	23113	genome.wustl.edu	37	6	43189010	43189010	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015089.2	+1	validated	p.R2235C	1.000	77	0%	70	27.1%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00647,superfamily_RING/U-box
COL19A1	1310	genome.wustl.edu	37	6	70859907	70859907	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001858.4	+1	reviewed	p.K669	1.000	104	0%	227	27.8%	-	-	-	-	-	HMMPfam_Collagen
KCNQ5	56479	genome.wustl.edu	37	6	73830276	73830276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_019842.3	+1	reviewed	p.A399D	1.000	82	0%	135	25.9%	-	-	possibly_damaging(0.891)	tolerated(0.14)	deleterious(0.600)	NULL
DOPEY1	23033	genome.wustl.edu	37	6	83847825	83847825	+	Missense_Mutation	SNP	G	G	A	rs142639349	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015018.2	+1	validated	p.R1355Q	1.000	58	0%	206	14.6%	-	-	possibly_damaging(0.902)	tolerated(0.2)	neutral(0.406)	NULL
ME1	4199	genome.wustl.edu	37	6	84140648	84140648	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002395.4	-1	reviewed	p.R9H	0.997	82	0%	105	35.2%	-	-	benign(0.001)	tolerated(0.53)	neutral(0.007)	superfamily_SSF53223
AIM1	202	genome.wustl.edu	37	6	107001426	107001427	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001624.2	+1	validated	p.R1449fs	1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_G_crystallin_SF
FIG4	9896	genome.wustl.edu	37	6	110086338	110086338	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014845.5	+1	reviewed	p.N519K	1.000	171	0%	397	26.7%	-	-	benign(0)	tolerated(1)	-	NULL
DDO	8528	genome.wustl.edu	37	6	110729595	110729595	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003649.2	-1	reviewed	p.L103I	0.298	237	0%	522	27.8%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DAO,superfamily_Nucleotide-binding domain
HS3ST5	222537	genome.wustl.edu	37	6	114378678	114378678	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_153612.3	-1	validated	p.P262S	1.000	233	0%	546	28.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
RSPH4A	345895	genome.wustl.edu	37	6	116948817	116948817	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001010892.2	+1	reviewed	p.M316T	0.982	162	0%	409	26.9%	-	-	possibly_damaging(0.688)	tolerated(0.09)	deleterious(0.542)	HMMPfam_Radial_spoke
RFX6	222546	genome.wustl.edu	37	6	117246619	117246619	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_173560.2	+1	validated	p.A561V	1.000	55	0%	161	28%	-	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
STX7	8417	genome.wustl.edu	37	6	132789613	132789613	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003569.2	-1	validated	p.A180D	1.000	131	0%	390	25.4%	-	-	benign(0.358)	deleterious(0.04)	neutral(0.462)	HMMPfam_SNARE,HMMSmart_SM00397,PatternScan_SYNTAXIN,superfamily_t-snare proteins
NHSL1	57224	genome.wustl.edu	37	6	138752679	138752680	+	In_Frame_Ins	INS	-	-	AGG	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001144060.1	-1	validated	p.934in_frame_insP	0.004:0.111	-	-	-	-	-	-	-	-	-	NULL
PHACTR2	9749	genome.wustl.edu	37	6	144033296	144033296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001100164.1	+1	validated	p.D64N	1.000	82	0%	285	26.3%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
RPS6KA2	6196	genome.wustl.edu	37	6	166827395	166827395	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001006932.1	-1	reviewed	p.V663M	0.962	124	0%	183	29.5%	-	-	benign(0.035)	deleterious(0.04)	neutral(0.351)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
RPS6KA2	6196	genome.wustl.edu	37	6	166833421	166833421	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001006932.1	-1	reviewed	p.A598V	1.000	110	0%	160	25.6%	-	-	benign(0.024)	tolerated(0.13)	neutral(0.254)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
FRMD1	79981	genome.wustl.edu	37	6	168479719	168479719	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024919.3	-1	validated	p.T19M	0.006	59	0%	63	33.3%	-	-	probably_damaging(1)	-	-	NULL
TRA2A	29896	genome.wustl.edu	37	7	23545408	23545410	+	In_Frame_Del	DEL	ATA	ATA	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	ATA	ATA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013293.3	-1	reviewed	p.Y265in_frame_del	0.993:1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
HOXA4	3201	genome.wustl.edu	37	7	27169063	27169063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002141.4	-1	reviewed	p.I248	1.000	311	0%	475	28.4%	-	-	-	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1
LOC100288050	100288050	genome.wustl.edu	37	7	37990043	37990043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_002342700.1	-1	model	p.R28C	0.000	29	0%	72	30.6%	-	-	-	-	-	NULL
GLI3	2737	genome.wustl.edu	37	7	42004738	42004738	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000168.5	-1	reviewed	p.G1311	0.002	32	0%	55	36.4%	-	-	-	-	-	NULL
HECW1	23072	genome.wustl.edu	37	7	43547615	43547615	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015052.3	+1	validated	e21-2	1.000	150	0.7%	237	34.6%	-	-	-	-	-	-
NUDCD3	23386	genome.wustl.edu	37	7	44467203	44467203	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015332.3	-1	reviewed	p.V203	1.000	183	0%	235	24.3%	-	-	-	-	-	superfamily_HSP20_chap,HMMPfam_CS
POM121L12	285877	genome.wustl.edu	37	7	53103949	53103949	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182595.3	+1	validated	p.P195	0.000	50	0%	84	34.5%	-	-	-	-	-	NULL
SEPT14	346288	genome.wustl.edu	37	7	55910764	55910766	+	In_Frame_Del	DEL	TTC	TTC	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_207366.2	-1	validated	p.E143in_frame_del	0.996:1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases
LOC100132308	100132308	genome.wustl.edu	37	7	63020586	63020586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_001715240.2	+1	model	p.A246T	1.000	137	0%	140	12.9%	-	-	-	-	-	HMMPfam_Nucleoside_tran
POM121	9883	genome.wustl.edu	37	7	72412793	72412793	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_172020.1	+1	reviewed	p.A489V	0.000	296	0%	415	27.2%	-	-	possibly_damaging(0.748)	deleterious(0.01)	deleterious(0.680)	NULL
POM121	9883	genome.wustl.edu	37	7	72413592	72413592	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_172020.1	+1	reviewed	p.A755	0.023	110	0%	173	20.8%	-	-	-	-	-	NULL
AKAP9	10142	genome.wustl.edu	37	7	91671392	91671393	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005751.4	+1	reviewed	p.R1654fs	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
KRIT1	889	genome.wustl.edu	37	7	91830071	91830071	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004912.3	-1	reviewed	p.M730I	1.000	166	0%	460	31.7%	-	-	benign(0.006)	tolerated(0.14)	neutral(0.249)	NULL
ERVW-1	30816	genome.wustl.edu	37	7	92098739	92098739	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014590.3	-1	reviewed	p.P319	0.186	348	0%	643	28.8%	-	-	-	-	-	HMMPfam_TLV_coat
LMTK2	22853	genome.wustl.edu	37	7	97823769	97823769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014916.3	+1	reviewed	p.R1331Q	1.000	75	0%	119	35.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FBXO24	26261	genome.wustl.edu	37	7	100189484	100189484	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033506.2	+1	reviewed	p.R173W	0.997	90	0%	125	24.8%	-	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ZAN	7455	genome.wustl.edu	37	7	100373123	100373123	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003386.1	+1	reviewed	p.R1984	0.001	99	0%	115	17.4%	-	-	unknown(0)	tolerated(0.41)	-	NULL
EMID2	136227	genome.wustl.edu	37	7	101063336	101063336	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000397927	+1	known	p.V79	0.986	45	0%	38	23.7%	-	-	-	-	-	HMMPfam_EMI
IMMP2L	83943	genome.wustl.edu	37	7	110603623	110603623	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032549.2	-1	provisional	e3-2	0.998	84	0%	279	23.3%	-	-	-	-	-	-
FLNC	2318	genome.wustl.edu	37	7	128488684	128488684	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001458.4	+1	reviewed	p.N1550	0.917	159	0%	131	26.7%	-	-	-	-	-	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
SLC13A4	26266	genome.wustl.edu	37	7	135387595	135387595	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012450.2	-1	validated	p.E210K	0.988	83	0%	146	26%	-	-	benign(0)	tolerated(0.8)	neutral(0.001)	HMMPfam_Na_sulph_symp
BRAF	673	genome.wustl.edu	37	7	140453134	140453134	+	Missense_Mutation	SNP	T	T	C	rs121913364	byCluster	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004333.4	-1	reviewed	p.K601E	1.000	136	0%	418	31.1%	-	-	probably_damaging(0.975)	tolerated(0.19)	neutral(0.466)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
TRBV4-2	28616	genome.wustl.edu	37	7	142045656	142045656	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000390392	+1	known	p.L62V	0.001	166	0%	399	21.1%	-	-	possibly_damaging(0.899)	tolerated(0.23)	neutral(0.397)	HMMPfam_V-set,superfamily_SSF48726
OR2A7	401427	genome.wustl.edu	37	7	143956013	143956013	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001005328.1	-1	provisional	p.F237V	1.000	436	0%	1039	12.5%	-	-	possibly_damaging(0.46)	deleterious(0)	deleterious(0.596)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CNTNAP2	26047	genome.wustl.edu	37	7	147600793	147600793	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014141.5	+1	reviewed	p.C745	0.217	68	0%	118	26.3%	-	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
ZNF212	7988	genome.wustl.edu	37	7	148947474	148947474	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012256.2	+1	reviewed	p.A83	0.969	143	0%	194	26.8%	-	-	-	-	-	NULL
ZNF746	155061	genome.wustl.edu	37	7	149172425	149172425	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152557.4	-1	validated	p.W329R	0.996	59	0%	83	31.3%	-	-	possibly_damaging(0.496)	tolerated(0.83)	neutral(0.166)	NULL
ABCB8	11194	genome.wustl.edu	37	7	150739142	150739142	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007188.3	+1	reviewed	p.A571V	1.000	81	0%	85	18.8%	-	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540
MLL3	58508	genome.wustl.edu	37	7	151875025	151875025	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_170606.2	-1	reviewed	p.I2505V	1.000	97	0%	196	27.6%	-	-	benign(0.031)	-	-	NULL
CLN8	2055	genome.wustl.edu	37	8	1719507	1719507	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018941.3	+1	reviewed	p.A96V	0.059	166	0%	273	12.5%	-	-	benign(0.001)	tolerated(1)	-	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC
ARHGEF10	9639	genome.wustl.edu	37	8	1857536	1857536	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014629.2	+1	reviewed	p.D681	0.015	134	0%	169	29.6%	-	-	-	-	-	superfamily_SSF50729
TNKS	8658	genome.wustl.edu	37	8	9605703	9605703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003747.2	+1	validated	p.T938M	1.000	62	0%	105	21%	-	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_Ank,superfamily_Ankyrin repeat
RP1L1	94137	genome.wustl.edu	37	8	10469626	10469626	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_178857.5	-1	validated	p.P661L	0.000	52	0%	77	36.4%	-	-	possibly_damaging(0.847)	deleterious(0.03)	deleterious(0.690)	NULL
EFHA2	286097	genome.wustl.edu	37	8	16963070	16963070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_181723.2	+1	validated	p.R412C	1.000	105	0%	235	29.4%	-	-	possibly_damaging(0.948)	deleterious(0.02)	deleterious(0.774)	superfamily_SSF47473
SLC18A1	6570	genome.wustl.edu	37	8	20036894	20036894	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001135691.2	-1	validated	p.P76T	0.000	152	0%	259	34.7%	-	-	benign(0.007)	tolerated(0.42)	neutral(0.014)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
POLR3D	661	genome.wustl.edu	37	8	22106055	22106055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001722.2	+1	reviewed	p.A183V	1.000	97	0%	131	29.8%	-	-	probably_damaging(0.996)	tolerated(0.24)	deleterious(0.499)	NULL
LOXL2	4017	genome.wustl.edu	37	8	23225618	23225618	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002318.2	-1	reviewed	p.V83M	1.000	39	0%	52	21.2%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SRCR,HMMSmart_SR,superfamily_Srcr_receptor
DOCK5	80005	genome.wustl.edu	37	8	25156478	25156478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024940.6	+1	validated	p.D209N	1.000	154	0%	379	28.5%	-	-	benign(0.067)	tolerated(0.34)	neutral(0.028)	NULL
DOCK5	80005	genome.wustl.edu	37	8	25230228	25230228	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000444569	+1	known	p.R998C	0.093	121	0%	192	17.7%	-	-	-	-	-	NULL
EPHX2	2053	genome.wustl.edu	37	8	27358479	27358479	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001979.4	+1	reviewed	p.P46	0.000	100	0%	233	28.3%	-	-	-	-	-	HMMPfam_Hydrolase,superfamily_SSF56784
EPHX2	2053	genome.wustl.edu	37	8	27398157	27398157	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001979.4	+1	reviewed	p.K455E	0.994	125	0%	207	30%	-	-	benign(0.009)	deleterious(0.04)	neutral(0.349)	HMMPfam_Abhydrolase_1,superfamily_SSF53474
LYN	4067	genome.wustl.edu	37	8	56864617	56864617	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002350.2	+1	validated	p.Y194H	1.000	152	0%	374	31%	-	-	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
ARFGEF1	10565	genome.wustl.edu	37	8	68170430	68170430	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006421.3	-1	reviewed	p.F777	1.000	147	0%	320	29.4%	-	-	-	-	-	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,superfamily_ARM-type_fold
ZFHX4	79776	genome.wustl.edu	37	8	77620056	77620056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024721.4	+1	validated	p.A930T	1.000	162	0%	327	27.5%	-	-	benign(0.135)	-	-	HMMSmart_SM00451,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SLC10A5	347051	genome.wustl.edu	37	8	82606130	82606130	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001010893.2	-1	validated	p.L360	0.984	96	0%	253	24.9%	-	-	-	-	-	NULL
DPY19L4	286148	genome.wustl.edu	37	8	95732230	95732230	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_181787.2	+1	validated	p.A2S	1.000	35	0%	37	18.9%	-	-	benign(0.007)	deleterious(0)	neutral(0.445)	NULL
KCNS2	3788	genome.wustl.edu	37	8	99441254	99441254	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020697.2	+1	provisional	p.T349	1.000	159	0%	238	26.1%	-	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
VPS13B	157680	genome.wustl.edu	37	8	100515121	100515121	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017890.3	+1	reviewed	p.V1367A	0.998	200	0%	609	30.4%	-	-	possibly_damaging(0.751)	deleterious(0)	deleterious(0.720)	NULL
VPS13B	157680	genome.wustl.edu	37	8	100844879	100844879	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017890.3	+1	reviewed	p.R3230G	1.000	22	0%	62	27.4%	-	-	possibly_damaging(0.929)	deleterious(0.03)	deleterious(0.740)	NULL
LRP12	29967	genome.wustl.edu	37	8	105509486	105509486	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013437.4	-1	reviewed	p.R432G	1.000	104	0%	273	28.9%	-	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00192,superfamily_LDL receptor-like module
ASAP1	50807	genome.wustl.edu	37	8	131104231	131104231	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018482.2	-1	validated	p.A854T	1.000	142	0.7%	267	29.6%	-	-	benign(0.001)	tolerated(1)	-	NULL
LRRC6	23639	genome.wustl.edu	37	8	133584642	133584642	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012472.3	-1	provisional	p.T438I	0.000	598	0%	1268	25.7%	-	-	benign(0.009)	tolerated(0.2)	neutral(0.050)	NULL
PTP4A3	11156	genome.wustl.edu	37	8	142432360	142432360	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032611.1	+1	reviewed	p.P7L	0.997	118	0%	141	32.6%	-	-	benign(0.009)	deleterious(0.03)	neutral(0.365)	HMMPfam_Y_phosphatase
JRK	8629	genome.wustl.edu	37	8	143746535	143746535	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001077527.1	-1	reviewed	p.V315I	0.003	43	0%	51	35.3%	-	-	-	-	-	HMMPfam_DDE
LYPD2	137797	genome.wustl.edu	37	8	143833840	143833840	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_205545.1	-1	provisional	p.A10	0.021	48	0%	71	25.4%	-	-	-	-	-	NULL
EEF1D	1936	genome.wustl.edu	37	8	144671743	144671743	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001130053.1	-1	reviewed	p.F170S	0.904	45	0%	42	21.4%	-	-	benign(0.252)	deleterious(0)	deleterious(0.471)	NULL
SCRIB	23513	genome.wustl.edu	37	8	144885673	144885673	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182706.3	-1	validated	p.N1161	1.000	11	0.000	9	0.667	-	-	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
MFSD3	113655	genome.wustl.edu	37	8	145735792	145735792	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_138431.1	+1	provisional	p.G244	0.005	168	0%	226	13.3%	-	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
ADAMTSL1	92949	genome.wustl.edu	37	9	18889697	18889697	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001040272.4	+1	validated	p.R1532C	0.951	32	0%	50	14%	-	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
DENND4C	55667	genome.wustl.edu	37	9	19346071	19346071	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017925.4	+1	provisional	p.A817T	1.000	151	0%	478	23%	-	-	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	NULL
DDX58	23586	genome.wustl.edu	37	9	32493801	32493801	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014314.3	-1	reviewed	p.L127	0.000	76	0%	255	31%	-	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
TAF1L	138474	genome.wustl.edu	37	9	32633671	32633671	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_153809.2	-1	provisional	p.R636H	1.000	357	0%	641	30.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TESK1	7016	genome.wustl.edu	37	9	35608233	35608233	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006285.2	+1	reviewed	p.I291T	1.000	253	0%	433	23.6%	-	-	possibly_damaging(0.808)	tolerated(0.42)	neutral(0.318)	superfamily_Kinase_like
MSMP	692094	genome.wustl.edu	37	9	35754030	35754030	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001044264.1	-1	provisional	p.G33*	1.000	102	0%	159	35.2%	-	-	-	-	-	NULL
VPS13A	23230	genome.wustl.edu	37	9	79968532	79968532	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033305.2	+1	reviewed	p.E2543*	1.000	57	0%	167	32.3%	-	-	-	-	-	NULL
FAM75C1	441452	genome.wustl.edu	37	9	90537137	90537137	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001145124.1	+1	validated	p.G772V	0.113	90	0%	156	28.8%	-	-	-	-	-	NULL
SECISBP2	79048	genome.wustl.edu	37	9	91973099	91973099	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024077.3	+1	reviewed	p.P818	0.939	148	0%	276	22.1%	-	-	-	-	-	NULL
HSD17B3	3293	genome.wustl.edu	37	9	99060705	99060705	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000197.1	-1	reviewed	p.S65L	0.014	70	0%	138	28.3%	-	-	benign(0.07)	deleterious(0)	neutral(0.450)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
PPP3R2	5535	genome.wustl.edu	37	9	104357055	104357055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_147180.2	-1	provisional	p.R53H	0.992	62	0%	114	30.7%	-	-	benign(0.008)	deleterious(0.02)	neutral(0.383)	HMMSmart_EFh,superfamily_SSF47473
ZNF462	58499	genome.wustl.edu	37	9	109690271	109690271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021224.4	+1	validated	p.L1360I	0.876	93	0%	108	14.8%	-	-	possibly_damaging(0.791)	tolerated(0.15)	deleterious(0.537)	superfamily_beta-sandwich domain of Sec23/24
LPAR1	1902	genome.wustl.edu	37	9	113704258	113704258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001401.3	-1	reviewed	p.R79H	1.000	80	0%	168	25.6%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
SUSD1	64420	genome.wustl.edu	37	9	114873997	114873997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000374263	-1	known	p.V370M	0.124	437	0%	693	29.9%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ORM2	5005	genome.wustl.edu	37	9	117093904	117093904	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000608.2	+1	reviewed	p.M129T	0.004	149	0%	245	10.6%	-	-	possibly_damaging(0.504)	deleterious(0)	deleterious(0.613)	HMMPfam_Lipocalin,superfamily_Lipocalins
GSN	2934	genome.wustl.edu	37	9	124088906	124088906	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000177.4	+1	reviewed	p.S562	0.526	28	0%	46	21.7%	-	-	-	-	-	superfamily_Actin depolymerizing proteins
LHX6	26468	genome.wustl.edu	37	9	124979492	124979492	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014368.3	-1	reviewed	p.N179	0.998	53	0%	94	35.1%	-	-	-	-	-	HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_SSF57716
RC3H2	54542	genome.wustl.edu	37	9	125621156	125621156	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001100588.1	-1	validated	p.A692V	1.000	175	0.6%	267	16.5%	-	-	possibly_damaging(0.888)	tolerated(0.12)	deleterious(0.608)	NULL
TOR2A	27433	genome.wustl.edu	37	9	130496708	130496708	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001085347.1	-1	validated	p.G96D	1.000	28	0%	41	43.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_Torsin,superfamily_P-loop containing nucleoside triphosphate hydrolases
ST6GALNAC6	30815	genome.wustl.edu	37	9	130653119	130653119	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013443.3	-1	provisional	p.R167	1.000	161	0%	195	30.3%	-	-	-	-	-	HMMPfam_Glyco_transf_29
FUBP3	8939	genome.wustl.edu	37	9	133493282	133493282	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003934.1	+1	validated	p.Q222H	1.000	197	0%	293	30.4%	-	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
TTF1	7270	genome.wustl.edu	37	9	135277918	135277918	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007344.2	-1	validated	p.D97	0.000	238	0.4%	526	30%	-	-	-	-	-	NULL
ABCA2	20	genome.wustl.edu	37	9	139911378	139911378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_212533.2	-1	reviewed	p.H948Y	1.000	36	0%	42	23.8%	-	-	probably_damaging(0.996)	tolerated(0.13)	deleterious(0.714)	NULL
FUT7	2529	genome.wustl.edu	37	9	139926162	139926162	+	Missense_Mutation	SNP	C	C	T	rs112623317		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004479.3	-1	reviewed	p.R10Q	0.011	22	0%	37	18.9%	-	-	benign(0.009)	tolerated(0.35)	neutral(0.021)	HMMPfam_Glyco_transf_10
ARRDC1	92714	genome.wustl.edu	37	9	140508786	140508786	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152285.2	+1	validated	p.D218	0.997	56	0%	81	29.6%	-	-	-	-	-	HMMPfam_Arrestin_C,superfamily_Ig_E-set
DIP2C	22982	genome.wustl.edu	37	10	518430	518430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014974.2	-1	reviewed	p.R73C	0.932	241	0%	302	26.8%	-	-	possibly_damaging(0.912)	deleterious(0.03)	deleterious(0.728)	HMMPfam_DMAP_binding
PRKCQ	5588	genome.wustl.edu	37	10	6528025	6528025	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006257.2	-1	reviewed	p.A291V	1.000	89	0%	155	29%	-	-	benign(0.175)	tolerated(0.24)	neutral(0.053)	NULL
CELF2	10659	genome.wustl.edu	37	10	11047357	11047357	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001025077.2	+1	reviewed	p.C3R	1.000	489	0%	1077	22.4%	-	-	possibly_damaging(0.604)	tolerated(0.15)	neutral(0.451)	NULL
SEPHS1	22929	genome.wustl.edu	37	10	13361236	13361236	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012247.3	-1	reviewed	p.R362H	1.000	280	0%	506	28.5%	-	-	benign(0)	deleterious(0.02)	neutral(0.383)	HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like
PRPF18	8559	genome.wustl.edu	37	10	13639505	13639505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003675.3	+1	reviewed	p.E38D	0.999	102	0%	414	28.7%	-	-	benign(0.113)	tolerated(0.18)	neutral(0.065)	NULL
FRMD4A	55691	genome.wustl.edu	37	10	13699056	13699056	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018027.3	-1	validated	p.A845T	1.000	9	0.000	10	0.500	-	-	benign(0.002)	tolerated(0.43)	neutral(0.013)	NULL
MLLT10	8028	genome.wustl.edu	37	10	21903785	21903787	+	In_Frame_Del	DEL	GAA	GAA	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004641.2	+1	validated	p.E181in_frame_del	1.000:1.000:1.000	-	-	-	-	-	-	-	-	-	HMMSmart_PHD
FZD8	8325	genome.wustl.edu	37	10	35929593	35929593	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_031866.2	-1	reviewed	p.G255	0.996	19	0%	15	46.7%	-	-	-	-	-	NULL
ZNF33B	7582	genome.wustl.edu	37	10	43089373	43089373	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006955.1	-1	provisional	p.S342L	0.303	199	0%	404	29.2%	-	-	probably_damaging(0.984)	tolerated(0.16)	deleterious(0.490)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
RET	5979	genome.wustl.edu	37	10	43608369	43608369	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020975.4	+1	reviewed	p.V573M	0.980	153	0%	186	26.9%	-	-	possibly_damaging(0.56)	tolerated(0.07)	deleterious(0.510)	NULL
ZFAND4	93550	genome.wustl.edu	37	10	46159128	46159128	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001128324.1	-1	validated	p.G16R	1.000	137	0%	328	30.5%	-	-	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
C10orf53	282966	genome.wustl.edu	37	10	50916497	50916497	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182554.2	+1	validated	p.S103Y	0.001	149	0%	295	28.1%	-	-	possibly_damaging(0.539)	-	-	NULL
OGDHL	55753	genome.wustl.edu	37	10	50966551	50966551	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018245.2	-1	validated	p.R30C	0.005	48	0%	56	21.4%	-	-	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
FAM13C	220965	genome.wustl.edu	37	10	61112178	61112178	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000442566	-1	known	p.A81V	0.000	92	0%	186	15.6%	-	-	benign(0)	tolerated(1)	-	NULL
RHOBTB1	9886	genome.wustl.edu	37	10	62648837	62648837	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014836.4	-1	reviewed	p.K197E	1.000	92	0%	257	28.4%	-	-	benign(0.378)	deleterious(0.05)	neutral(0.466)	HMMSmart_RHO,HMMPfam_Ras,superfamily_SSF52540
MYPN	84665	genome.wustl.edu	37	10	69918338	69918338	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032578.2	+1	validated	p.E471D	1.000	114	0%	408	23.5%	-	-	possibly_damaging(0.772)	tolerated(0.25)	neutral(0.324)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
POLR3A	11128	genome.wustl.edu	37	10	79745861	79745861	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007055.3	-1	validated	p.K986	1.000	300	0%	792	30.2%	-	-	-	-	-	HMMPfam_RNA_pol_Rpb1_5,superfamily_SSF64484
ZMIZ1	57178	genome.wustl.edu	37	10	80968135	80968135	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020338.3	+1	validated	p.L35	1.000	132	0%	182	29.7%	-	-	-	-	-	NULL
PTEN	5728	genome.wustl.edu	37	10	89692964	89692964	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000371953	+1	known	p.E150*	1.000	135	0%	321	55.8%	-	-	-	-	-	HMMPfam_DSPc,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
KIF20B	9585	genome.wustl.edu	37	10	91479179	91479179	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016195.2	+1	validated	p.C480R	0.916	28	0%	75	21.3%	-	-	benign(0.119)	tolerated(0.28)	neutral(0.041)	HMMPfam_Kinesin,HMMSmart_SM00129
HECTD2	143279	genome.wustl.edu	37	10	93247526	93247526	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182765.3	+1	validated	p.N394	1.000	64	0%	326	26.4%	-	-	-	-	-	NULL
HPSE2	60495	genome.wustl.edu	37	10	100995363	100995363	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021828.4	-1	reviewed	p.S66N	1.000	191	0%	342	14%	-	-	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
ADRA2A	150	genome.wustl.edu	37	10	112837959	112837959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000681.3	+1	reviewed	p.V69I	1.000	44	0%	57	29.8%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
VWA2	340706	genome.wustl.edu	37	10	116046128	116046128	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_198496.1	+1	provisional	p.G477fs	1.000	-	-	-	-	-	-	-	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
DHX32	55760	genome.wustl.edu	37	10	127526857	127526859	+	In_Frame_Del	DEL	TCT	TCT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018180.2	-1	reviewed	p.K660in_frame_del	0.998:1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_DUF1605
FOXI2	399823	genome.wustl.edu	37	10	129535890	129535890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_207426.2	+1	validated	p.A118V	1.000	52	0%	42	26.2%	-	-	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
PPP2R2D	55844	genome.wustl.edu	37	10	133761123	133761123	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000455566	+1	known	p.R273W	1.000	88	0%	200	22%	-	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMSmart_SM00320,superfamily_WD40 repeat-like
B4GALNT4	338707	genome.wustl.edu	37	11	372934	372934	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_178537.4	+1	validated	p.P144L	1.000	51	0%	39	30.8%	-	-	unknown(0)	deleterious(0.02)	-	HMMPfam_PA14,HMMSmart_PA14
PHRF1	57661	genome.wustl.edu	37	11	608849	608849	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020901.2	+1	validated	p.R1130	0.003	28	0%	28	25%	-	-	-	-	-	NULL
EPS8L2	64787	genome.wustl.edu	37	11	721349	721349	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_022772.3	+1	reviewed	p.E255	0.970	23	0%	40	30%	-	-	-	-	-	NULL
SLC22A18AS	5003	genome.wustl.edu	37	11	2909797	2909797	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007105.2	-1	validated	p.I125	0.465	101	0%	112	35.7%	-	-	-	-	-	NULL
DCHS1	8642	genome.wustl.edu	37	11	6654187	6654187	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003737.2	-1	reviewed	p.L852	1.000	106	0%	176	34.1%	-	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
KCNJ11	3767	genome.wustl.edu	37	11	17408599	17408599	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000525.3	-1	reviewed	p.R347H	1.000	165	0%	189	30.2%	-	-	probably_damaging(0.976)	deleterious(0.05)	deleterious(0.763)	HMMPfam_IRK,superfamily_Ig_E-set
ENSG00000189332	0	genome.wustl.edu	37	11	18231324	18231324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000340135	+1	known	p.S37N	0.583	43	0%	112	33%	-	-	benign(0.021)	tolerated(0.66)	neutral(0.004)	superfamily_Mitochondrial carrier
SAA1	6288	genome.wustl.edu	37	11	18291383	18291383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000331.4	+1	reviewed	p.G117D	0.870	218	0%	301	35.9%	-	-	benign(0.172)	tolerated(0.06)	neutral(0.338)	HMMPfam_SAA,HMMSmart_SM00197
GTF2H1	2965	genome.wustl.edu	37	11	18361120	18361120	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001142307.1	+1	validated	p.R175W	1.000	311	0%	561	34.4%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PTPN5	84867	genome.wustl.edu	37	11	18751321	18751321	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006906.1	-1	validated	p.S458	0.997	65	0%	130	30%	-	-	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
ANO3	63982	genome.wustl.edu	37	11	26547199	26547199	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_031418.2	+1	validated	p.T237I	1.000	303	0%	1035	29.4%	-	-	benign(0.031)	tolerated(0.13)	neutral(0.254)	NULL
ABTB2	25841	genome.wustl.edu	37	11	34226142	34226142	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145804.1	-1	provisional	p.T141A	1.000	87	0%	91	18.7%	-	-	possibly_damaging(0.513)	tolerated(0.15)	neutral(0.413)	NULL
RAG1	5896	genome.wustl.edu	37	11	36595105	36595105	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000448.2	+1	reviewed	p.H84P	0.001	45	0%	83	32.5%	-	-	benign(0.119)	deleterious(0.03)	neutral(0.374)	NULL
C11orf94	143678	genome.wustl.edu	37	11	45928166	45928166	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080446.2	-1	validated	p.R84Q	0.965	75	0%	91	34.1%	-	-	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
LRP4	4038	genome.wustl.edu	37	11	46886063	46886063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002334.3	-1	reviewed	p.A1727T	0.632	95	0%	204	18.1%	-	-	benign(0.003)	tolerated(0.21)	neutral(0.044)	NULL
OR4C6	219432	genome.wustl.edu	37	11	55432733	55432733	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001004704.1	+1	provisional	p.V31I	0.000	208	0%	534	23.2%	-	-	benign(0)	tolerated(0.4)	neutral(0.016)	superfamily_Family A G protein-coupled receptor-like
OR8U1	219417	genome.wustl.edu	37	11	56143713	56143713	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001005204.1	+1	provisional	p.I205T	0.013	396	0%	588	25.7%	-	-	benign(0.064)	tolerated(0.13)	neutral(0.257)	HMMPfam_7tm_1,superfamily_SSF81321
OR5M8	219484	genome.wustl.edu	37	11	56258494	56258494	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001005282.1	-1	provisional	p.A118V	1.000	89	0%	186	33.3%	-	-	benign(0.142)	deleterious(0)	neutral(0.457)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
MS4A1	931	genome.wustl.edu	37	11	60231776	60231776	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021950.3	+1	reviewed	p.S99T	1.000	181	0%	475	28.6%	-	-	probably_damaging(0.998)	tolerated(0.05)	deleterious(0.820)	HMMPfam_CD20
MS4A8B	83661	genome.wustl.edu	37	11	60482506	60482506	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_031457.1	+1	reviewed	p.A183T	0.000	164	0%	261	33%	-	-	benign(0.117)	tolerated(0.15)	neutral(0.251)	HMMPfam_CD20
SCGB1D2	10647	genome.wustl.edu	37	11	62010815	62010815	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006551.3	+1	reviewed	p.I37S	0.000	250	0%	481	26.4%	-	-	benign(0.025)	tolerated(0.83)	neutral(0.002)	HMMPfam_Uteroglobin,HMMSmart_UTG,superfamily_Secretoglobin
C11orf48	79081	genome.wustl.edu	37	11	62437211	62437212	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024099.3	-1	validated	p.S72fs	0.008:0.017	-	-	-	-	-	-	-	-	-	NULL
FLRT1	23769	genome.wustl.edu	37	11	63883943	63883943	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013280.4	+1	reviewed	p.N68	0.969	62	0%	86	27.9%	-	-	-	-	-	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like
CCDC88B	283234	genome.wustl.edu	37	11	64108902	64108902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032251.5	+1	reviewed	p.R153W	1.000	89	0%	116	25.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATG2A	23130	genome.wustl.edu	37	11	64677164	64677164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015104.2	-1	validated	p.S699F	0.149	63	0%	75	24%	-	-	benign(0.355)	deleterious(0.01)	deleterious(0.518)	NULL
DPF2	5977	genome.wustl.edu	37	11	65108939	65108939	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006268.3	+1	reviewed	p.R124H	1.000	105	0%	215	31.2%	-	-	possibly_damaging(0.934)	tolerated(0.05)	deleterious(0.726)	NULL
SCYL1	57410	genome.wustl.edu	37	11	65305782	65305782	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020680.3	+1	reviewed	p.L763	0.994	43	0%	54	29.6%	-	-	benign(0)	tolerated(0.16)	neutral(0.059)	NULL
ODZ4	26011	genome.wustl.edu	37	11	78497992	78497992	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001098816.2	-1	validated	p.D772	0.972	27	0%	39	30.8%	-	-	-	-	-	HMMSmart_EGF,HMMPfam_EGF_2
HEPHL1	341208	genome.wustl.edu	37	11	93754541	93754541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001098672.1	+1	validated	p.R3W	1.000	105	0%	205	29.8%	-	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
MRE11A	4361	genome.wustl.edu	37	11	94211996	94211996	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005591.3	-1	reviewed	p.V150A	1.000	98	0%	241	27.4%	-	-	benign(0.083)	deleterious(0)	neutral(0.451)	HMMPfam_Metallophos,superfamily_Metallo-dependent phosphatases
CCDC82	79780	genome.wustl.edu	37	11	96117597	96117597	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024725.3	-1	validated	p.N105	0.000	375	0.3%	883	29.3%	-	-	-	-	-	NULL
DYNC2H1	79659	genome.wustl.edu	37	11	102984346	102984346	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080463.1	+1	reviewed	p.H92	0.641	182	0%	457	26%	-	-	-	-	-	NULL
ZC3H12C	85463	genome.wustl.edu	37	11	110023767	110023767	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033390.1	+1	validated	p.P299	0.906	99	0%	195	32.8%	-	-	-	-	-	NULL
HTR3A	3359	genome.wustl.edu	37	11	113857684	113857684	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_213621.3	+1	reviewed	p.A384T	0.005	66	0%	116	33.6%	-	-	benign(0)	deleterious(0.02)	neutral(0.383)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
SLC37A2	219855	genome.wustl.edu	37	11	124955353	124955353	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_198277.2	+1	validated	p.D437	0.990	111	0%	121	23.1%	-	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
ADAMTS8	11095	genome.wustl.edu	37	11	130286152	130286152	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007037.4	-1	reviewed	p.H390	1.000	75	0%	87	21.8%	-	-	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
IQSEC3	440073	genome.wustl.edu	37	12	248095	248095	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015232.1	+1	validated	p.P219	0.003	34	0%	27	14.8%	-	-	-	-	-	NULL
LRTM2	654429	genome.wustl.edu	37	12	1943735	1943735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001039029.2	+1	validated	p.V321I	0.997	4	0.000	17	0.353	-	-	unknown(0)	-	-	NULL
CACNA1C	775	genome.wustl.edu	37	12	2694544	2694544	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_199460.2	+1	reviewed	p.T781I	1.000	40	0%	102	24.5%	-	-	possibly_damaging(0.883)	tolerated(0.18)	neutral(0.401)	NULL
C1RL	51279	genome.wustl.edu	37	12	7249261	7249267	+	Frame_Shift_Del	DEL	GCTACAG	GCTACAG	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GCTACAG	GCTACAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016546.2	-1	validated	p.P395fs	0.093:0.118:0.000:0.178:0.165:0.016:0.994	-	-	-	-	-	-	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
CLEC2A	387836	genome.wustl.edu	37	12	10084891	10084891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001130711.1	-1	provisional	p.G13D	0.000	136	0%	228	27.2%	-	-	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	NULL
LST-3TM12	338821	genome.wustl.edu	37	12	21207445	21207445	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001009562.4	+1	validated	p.A472	0.000	174	0%	537	25.5%	-	-	-	-	-	HMMPfam_OATP,superfamily_MFS general substrate transporter
SLCO1A2	6579	genome.wustl.edu	37	12	21453462	21453462	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021094.3	-1	reviewed	p.A244T	1.000	131	0%	324	26.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_OATP,superfamily_MFS general substrate transporter
IFLTD1	160492	genome.wustl.edu	37	12	25679804	25679804	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001145728.1	-1	validated	p.A193T	0.002	186	0%	344	28.2%	-	-	benign(0.071)	tolerated(0.13)	neutral(0.258)	HMMPfam_IF_tail,superfamily_Lamin A/C globular tail domain
ERGIC2	51290	genome.wustl.edu	37	12	29502073	29502073	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016570.2	-1	validated	p.F222	1.000	31	0%	147	26.5%	-	-	-	-	-	HMMPfam_DUF1692
YARS2	51067	genome.wustl.edu	37	12	32906877	32906877	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001040436.1	-1	validated	p.R308G	0.999	164	0%	288	27.8%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_tRNA-synt_1b,superfamily_SSF52374
RPAP3	79657	genome.wustl.edu	37	12	48057297	48057297	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024604.2	-1	reviewed	p.Y663	0.854	82	0%	359	20.3%	-	-	-	-	-	NULL
COL2A1	1280	genome.wustl.edu	37	12	48380215	48380215	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001844.4	-1	reviewed	p.G477	0.947	42	0%	62	35.5%	-	-	-	-	-	HMMPfam_Collagen
KRT4	3851	genome.wustl.edu	37	12	53207818	53207818	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002272.2	-1	reviewed	p.R83*	0.814	46	0%	58	19%	-	-	-	-	-	NULL
KRT8	3856	genome.wustl.edu	37	12	53292559	53292559	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002273.3	-1	reviewed	p.R369Q	0.612	149	0.7%	152	12.5%	-	-	benign(0.016)	tolerated(0.16)	neutral(0.060)	HMMPfam_Filament
TENC1	23371	genome.wustl.edu	37	12	53453350	53453350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015319.2	+1	reviewed	p.R652H	0.993	26	0%	34	38.2%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RARG	5916	genome.wustl.edu	37	12	53608246	53608246	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000966.4	-1	validated	p.L207P	1.000	220	0.5%	323	22.9%	-	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_Nuclear receptor ligand-binding domain
CALCOCO1	57658	genome.wustl.edu	37	12	54107930	54107930	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020898.2	-1	validated	p.A526	0.001	129	0%	203	28.1%	-	-	-	-	-	HMMPfam_CALCOCO1
ZC3H10	84872	genome.wustl.edu	37	12	56515043	56515043	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032786.1	+1	provisional	p.R233*	0.997	38	0%	73	24.7%	-	-	-	-	-	NULL
ANKRD52	283373	genome.wustl.edu	37	12	56637023	56637023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_173595.3	-1	validated	p.T1045M	1.000	42	0%	52	34.6%	-	-	possibly_damaging(0.948)	tolerated(0.06)	deleterious(0.714)	NULL
NACA	4666	genome.wustl.edu	37	12	57113968	57113968	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001113203.1	-1	validated	p.I449S	0.006	161	0%	291	26.8%	-	-	unknown(0)	tolerated(0.13)	-	NULL
ZBTB39	9880	genome.wustl.edu	37	12	57397594	57397594	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014830.1	-1	provisional	p.L370	1.000	180	0%	312	34.9%	-	-	-	-	-	NULL
MARS	4141	genome.wustl.edu	37	12	57882850	57882850	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004990.2	+1	reviewed	p.L53P	1.000	200	0%	334	33.5%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
DCTN2	10540	genome.wustl.edu	37	12	57927790	57927790	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006400.3	-1	reviewed	p.V210	1.000	228	0%	481	29.9%	-	-	-	-	-	HMMPfam_Dynamitin
KIF5A	3798	genome.wustl.edu	37	12	57963939	57963939	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004984.2	+1	reviewed	p.D429	0.868	54	0%	66	27.3%	-	-	-	-	-	NULL
MON2	23041	genome.wustl.edu	37	12	62943556	62943556	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015026.2	+1	validated	p.S954	1.000	145	0%	424	27.8%	-	-	-	-	-	superfamily_ARM-type_fold
PPM1H	57460	genome.wustl.edu	37	12	63042351	63042351	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020700.1	-1	validated	p.R488Q	1.000	187	0%	301	24.9%	-	-	possibly_damaging(0.8)	deleterious(0.01)	deleterious(0.707)	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain
GNS	2799	genome.wustl.edu	37	12	65110563	65110563	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002076.3	-1	reviewed	p.R539	0.003	113	0%	221	31.2%	-	-	-	-	-	NULL
LEMD3	23592	genome.wustl.edu	37	12	65632292	65632292	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014319.4	+1	reviewed	p.P569H	1.000	75	0%	266	27.8%	-	-	probably_damaging(0.992)	deleterious(0.03)	deleterious(0.812)	NULL
HELB	92797	genome.wustl.edu	37	12	66704271	66704271	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033647.2	+1	reviewed	p.T521	0.000	64	0%	164	32.3%	-	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
PTPRB	5787	genome.wustl.edu	37	12	70974901	70974902	+	Frame_Shift_Del	DEL	GA	GA	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001109754.1	-1	reviewed	p.L831fs	0.995:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
NAV3	89795	genome.wustl.edu	37	12	78400517	78400517	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014903.4	+1	validated	p.P400Q	0.995	120	0%	233	29.2%	-	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
PPFIA2	8499	genome.wustl.edu	37	12	82147935	82147935	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003625.2	-1	reviewed	p.S22R	1.000	141	0%	280	28.6%	-	-	possibly_damaging(0.658)	tolerated(0.48)	neutral(0.243)	NULL
TMTC2	160335	genome.wustl.edu	37	12	83424581	83424581	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152588.1	+1	provisional	p.R692H	1.000	223	0%	493	31.8%	-	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_TPR_2,HMMSmart_SM00028,superfamily_TPR-like
HAL	3034	genome.wustl.edu	37	12	96374592	96374592	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002108.2	-1	reviewed	p.G446V	1.000	174	0%	380	27.6%	-	-	-	-	-	HMMPfam_PAL,superfamily_L-Aspartase-like
TMPO	7112	genome.wustl.edu	37	12	98938754	98938754	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001032283.2	+1	reviewed	p.F302C	1.000	135	0%	451	34.1%	-	-	possibly_damaging(0.918)	deleterious(0)	deleterious(0.813)	NULL
ANKS1B	56899	genome.wustl.edu	37	12	100169375	100169375	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152788.3	-1	validated	p.Q304	0.989	166	0%	535	17.2%	-	-	-	-	-	NULL
USP30	84749	genome.wustl.edu	37	12	109523471	109523471	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032663.3	+1	validated	e13-1	1.000	149	0%	253	35.2%	-	-	-	-	-	-
MYL2	4633	genome.wustl.edu	37	12	111352044	111352044	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000432.3	-1	reviewed	p.P74T	0.999	186	0%	397	22.4%	-	-	possibly_damaging(0.548)	deleterious(0.05)	deleterious(0.531)	superfamily_EF-hand
OAS2	4939	genome.wustl.edu	37	12	113424892	113424892	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016817.2	+1	reviewed	p.T76I	0.011	47	0%	99	25.3%	-	-	benign(0.027)	tolerated(0.08)	neutral(0.301)	PatternScan_25A_SYNTH_1,superfamily_Nucleotidyltransferase
RASAL1	8437	genome.wustl.edu	37	12	113553482	113553482	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004658.1	-1	reviewed	p.R321C	1.000	80	0%	122	40.2%	-	-	possibly_damaging(0.768)	deleterious(0.01)	deleterious(0.691)	HMMSmart_SM00323,superfamily_GTPase activation domain GAP
SRRM4	84530	genome.wustl.edu	37	12	119419797	119419797	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_194286.2	+1	validated	p.T37M	1.000	58	0%	90	32.2%	-	-	unknown(0)	deleterious(0)	-	NULL
PRKAB1	5564	genome.wustl.edu	37	12	120114386	120114386	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006253.4	+1	reviewed	p.V193I	0.029	257	0%	514	28.6%	-	-	benign(0)	tolerated(0.65)	neutral(0.003)	HMMPfam_AMPKBI
PXN	5829	genome.wustl.edu	37	12	120651738	120651738	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080855.1	-1	validated	p.F472	0.646	99	0%	133	27.8%	-	-	-	-	-	HMMPfam_LIM,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
PITPNM2	57605	genome.wustl.edu	37	12	123490066	123490066	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020845.2	-1	validated	p.R225W	1.000	111	0%	144	31.2%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IP_trans,superfamily_Bet v1-like
TCTN2	79867	genome.wustl.edu	37	12	124181003	124181003	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024809.3	+1	validated	p.R452W	0.000	215	0%	399	34.1%	-	-	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	NULL
FAM101A	144347	genome.wustl.edu	37	12	124798897	124798897	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_181709.3	+1	validated	p.P78	0.369	94	0%	90	26.7%	-	-	-	-	-	NULL
SCARB1	949	genome.wustl.edu	37	12	125302250	125302250	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005505.4	-1	validated	p.V44M	0.998	116	0%	179	24%	-	-	probably_damaging(0.992)	tolerated(0.05)	deleterious(0.793)	HMMPfam_CD36
EP400	57634	genome.wustl.edu	37	12	132530314	132530314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015409.3	+1	validated	p.V2356M	0.993	219	0%	337	29.1%	-	-	unknown(0)	-	-	superfamily_Homeodomain_like
MPHOSPH8	54737	genome.wustl.edu	37	13	20240694	20240694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017520.3	+1	validated	p.D717N	1.000	130	0%	237	24.9%	-	-	possibly_damaging(0.81)	deleterious(0.01)	deleterious(0.711)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
NBEA	26960	genome.wustl.edu	37	13	36180629	36180629	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015678.4	+1	validated	p.V2455I	0.993	203	0%	501	25.1%	-	-	benign(0.001)	tolerated(0.52)	neutral(0.009)	HMMPfam_Beach,superfamily_BEACH domain,superfamily_ARM repeat
FREM2	341640	genome.wustl.edu	37	13	39424333	39424333	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_207361.4	+1	reviewed	p.R2180C	1.000	100	0%	245	31%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Calx-beta,HMMSmart_SM00237
KIAA0564	23078	genome.wustl.edu	37	13	42273252	42273252	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015058.1	-1	validated	p.P1173	0.011	143	0%	266	32%	-	-	-	-	-	NULL
ENOX1	55068	genome.wustl.edu	37	13	43900612	43900612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001127615.1	-1	validated	p.W362C	1.000	183	0%	326	25.8%	-	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TSC22D1	8848	genome.wustl.edu	37	13	45148518	45148518	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_183422.2	-1	validated	p.V565I	0.666	143	0%	243	31.7%	-	-	possibly_damaging(0.612)	tolerated(0.29)	neutral(0.241)	NULL
ZC3H13	23091	genome.wustl.edu	37	13	46549612	46549613	+	Frame_Shift_Ins	INS	-	-	CT	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015070.3	-1	validated	p.E759fs	0.993:1.000	-	-	-	-	-	-	-	-	-	NULL
RNASEH2B	79621	genome.wustl.edu	37	13	51522189	51522189	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024570.2	+1	reviewed	p.L228S	0.993	110	0%	301	23.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RNase_H2-Ydr279
PCDH17	27253	genome.wustl.edu	37	13	58207121	58207121	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001040429.2	+1	reviewed	p.P147	0.002	71	0%	111	26.1%	-	-	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
KLF12	11278	genome.wustl.edu	37	13	74387338	74387338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007249.4	-1	validated	p.V253I	1.000	437	0%	765	27.2%	-	-	benign(0.382)	deleterious(0.03)	deleterious(0.486)	NULL
COL4A2	1284	genome.wustl.edu	37	13	111144499	111144499	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001846.2	+1	reviewed	p.G1179	0.999	119	0%	160	31.2%	-	-	-	-	-	HMMPfam_Collagen
PTGDR	5729	genome.wustl.edu	37	14	52734866	52734866	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000953.2	+1	reviewed	p.M112V	1.000	87	0%	156	22.4%	-	-	possibly_damaging(0.649)	deleterious(0.01)	deleterious(0.634)	HMMPfam_7tm_1,superfamily_SSF81321
ARID4A	5926	genome.wustl.edu	37	14	58827719	58827719	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002892.3	+1	reviewed	p.P680L	0.998	125	0%	335	26.3%	-	-	benign(0.15)	tolerated(0.22)	neutral(0.055)	NULL
DAAM1	23002	genome.wustl.edu	37	14	59798626	59798626	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014992.1	+1	reviewed	p.Y652	1.000	76	0%	240	29.6%	-	-	-	-	-	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
RTN1	6252	genome.wustl.edu	37	14	60193992	60193992	+	Silent	SNP	C	C	T	rs74373925		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021136.2	-1	reviewed	p.S470	0.258	15	0%	17	47.1%	-	-	-	-	-	NULL
MTHFD1	4522	genome.wustl.edu	37	14	64892895	64892895	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005956.3	+1	reviewed	p.Y371C	1.000	82	0%	176	25.6%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_FTHFS,superfamily_P-loop containing nucleoside triphosphate hydrolases
PLEKHG3	26030	genome.wustl.edu	37	14	65208199	65208199	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015549.1	+1	validated	p.G599D	0.078	35	0%	42	14.3%	-	-	benign(0.273)	deleterious(0)	deleterious(0.474)	NULL
C14orf43	91748	genome.wustl.edu	37	14	74206064	74206064	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001043318.1	-1	validated	p.P216	0.965	54	0%	63	38.1%	-	-	-	-	-	NULL
EIF2B2	8892	genome.wustl.edu	37	14	75473336	75473336	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014239.3	+1	reviewed	p.G250	0.997	256	0%	406	29.6%	-	-	-	-	-	HMMPfam_IF-2B,superfamily_NagB/RpiA/CoA transferase-like
SAMD15	161394	genome.wustl.edu	37	14	77844680	77844680	+	Silent	SNP	C	C	A	rs113603159		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001010860.1	+1	provisional	p.R307	0.000	25	0%	100	27%	-	-	-	-	-	NULL
ISM2	145501	genome.wustl.edu	37	14	77944649	77944649	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182509.3	-1	reviewed	p.P263L	0.000	130	0%	165	32.1%	-	-	unknown(0)	-	-	NULL
SEL1L	6400	genome.wustl.edu	37	14	81945992	81945992	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000261258	-1	known	p.R74C	0.000	77	0%	230	28.7%	-	-	possibly_damaging(0.905)	deleterious(0)	deleterious(0.804)	NULL
TTC7B	145567	genome.wustl.edu	37	14	91142993	91142993	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001010854.1	-1	provisional	p.D342	0.570	100	0%	130	33.8%	-	-	-	-	-	superfamily_TPR-like
BTBD7	55727	genome.wustl.edu	37	14	93709395	93709395	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001002860.2	-1	validated	p.A875T	1.000	139	0%	249	33.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATG2B	55102	genome.wustl.edu	37	14	96779401	96779401	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018036.5	-1	validated	e25+1	1.000	53	0%	179	22.9%	-	-	-	-	-	-
WARS	7453	genome.wustl.edu	37	14	100820842	100820842	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004184.3	-1	reviewed	p.R162W	1.000	63	0%	212	30.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Nucleotidylyl transferase
TECPR2	9895	genome.wustl.edu	37	14	102898168	102898168	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014844.3	+1	validated	p.R374C	0.001	43	0%	76	28.9%	-	-	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
C14orf79	122616	genome.wustl.edu	37	14	105457889	105457889	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_174891.3	+1	validated	p.R211C	0.038	210	0%	392	33.7%	-	-	benign(0)	tolerated(0.15)	neutral(0.241)	NULL
IGHV4-59	28392	genome.wustl.edu	37	14	107083527	107083527	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000455737	-1	known	p.S26L	0.656	299	0.3%	564	18.1%	-	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
LOC642131	642131	genome.wustl.edu	37	15	22472950	22472950	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_001716834.1	-1	model	p.A114	0.026	233	0%	311	18.6%	-	-	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
NIPA1	123606	genome.wustl.edu	37	15	23049067	23049067	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_144599.4	-1	reviewed	p.A251V	1.000	87	0%	137	29.2%	-	-	possibly_damaging(0.903)	deleterious(0)	deleterious(0.802)	HMMPfam_DUF803
ATP10A	57194	genome.wustl.edu	37	15	26107973	26107973	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024490.3	-1	reviewed	p.F91V	1.000	81	0%	92	20.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRPM1	4308	genome.wustl.edu	37	15	31329959	31329959	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002420.4	-1	reviewed	p.I820	1.000	293	0%	755	28.2%	-	-	-	-	-	NULL
OTUD7A	161725	genome.wustl.edu	37	15	31862287	31862287	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_130901.1	-1	provisional	p.R89*	0.996	95	0%	107	33.6%	-	-	-	-	-	NULL
ACTC1	70	genome.wustl.edu	37	15	35084304	35084304	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005159.4	-1	reviewed	p.Q265H	1.000	114	0%	184	31%	-	-	benign(0.181)	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
ATPBD4	89978	genome.wustl.edu	37	15	35830610	35830610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080650.3	-1	validated	p.D59E	0.839	181	0%	322	30.7%	-	-	benign(0)	tolerated(1)	-	HMMPfam_ATP_bind_4,superfamily_Adenine nucleotide alpha hydrolases-like
PLCB2	5330	genome.wustl.edu	37	15	40583363	40583363	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004573.2	-1	validated	p.S964	0.001	14	0%	15	40%	-	-	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42028600	42028600	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080541.2	+1	validated	p.R1380*	0.997	143	0%	246	30.5%	-	-	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42053985	42053985	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080541.2	+1	validated	p.G2532*	1.000	62	0%	226	29.2%	-	-	-	-	-	superfamily_HLH helix-loop-helix DNA-binding domain
SPTBN5	51332	genome.wustl.edu	37	15	42169046	42169046	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016642.2	-1	validated	p.G1236D	0.095	52	0%	54	35.2%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTBN5	51332	genome.wustl.edu	37	15	42172419	42172419	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016642.2	-1	validated	p.V882A	0.000	53	0%	56	23.2%	-	-	benign(0)	tolerated(0.42)	neutral(0.014)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
FRMD5	84978	genome.wustl.edu	37	15	44198059	44198059	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032892.3	-1	validated	p.R173M	1.000	222	0%	384	27.6%	-	-	probably_damaging(0.973)	tolerated(0.09)	deleterious(0.712)	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
GALK2	2585	genome.wustl.edu	37	15	49575813	49575813	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002044.2	+1	reviewed	p.P218	0.989	143	0%	388	26.8%	-	-	-	-	-	superfamily_Ribosomal_S5_D2-typ_fold
APH1B	83464	genome.wustl.edu	37	15	63571491	63571491	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_031301.3	+1	validated	p.I82N	0.997	197	0.5%	606	27.1%	-	-	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	HMMPfam_Aph-1
SNORD16	595097	genome.wustl.edu	37	15	66795233	66795233	+	RNA	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NR_002440.1	-1	provisional	NULL	1.000	36	0%	89	29.2%	-	-	-	-	-	-
SKOR1	390598	genome.wustl.edu	37	15	68118704	68118704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001031807.1	+1	provisional	p.A171T	1.000	79	0%	92	28.3%	-	-	benign(0.135)	deleterious(0.01)	neutral(0.417)	superfamily_SAND_like,HMMPfam_c-SKI_SMAD_bind
PAQR5	54852	genome.wustl.edu	37	15	69677101	69677101	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001104554.1	+1	validated	p.C89R	0.960	241	0%	340	24.7%	-	-	benign(0.002)	deleterious(0.02)	neutral(0.383)	HMMPfam_HlyIII
CCDC33	80125	genome.wustl.edu	37	15	74536466	74536466	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025055.3	+1	validated	p.S54	0.055	75	0%	119	32.8%	-	-	-	-	-	HMMPfam_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PTPN9	5780	genome.wustl.edu	37	15	75762284	75762284	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002833.2	-1	reviewed	p.G472	0.961	132	0%	205	25.9%	-	-	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
LOC441728	441728	genome.wustl.edu	37	15	76077411	76077411	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XR_017329.2	+1	model	NULL	0.769	89	0%	109	17.4%	-	-	-	-	-	-
IL16	3603	genome.wustl.edu	37	15	81575053	81575053	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_172217.3	+1	reviewed	p.H385	0.998	129	0%	182	25.8%	-	-	-	-	-	HMMSmart_SM00228,superfamily_PDZ domain-like
WHAMM	123720	genome.wustl.edu	37	15	83499455	83499455	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080435.1	+1	provisional	p.A582	0.000	73	0%	160	24.4%	-	-	-	-	-	NULL
ALPK3	57538	genome.wustl.edu	37	15	85400778	85400778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020778.4	+1	validated	p.A1139T	0.139	22	0%	27	29.6%	-	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
KIF7	374654	genome.wustl.edu	37	15	90190244	90190244	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_198525.2	-1	validated	p.R535	0.999	59	0%	59	28.8%	-	-	-	-	-	NULL
RGMA	56963	genome.wustl.edu	37	15	93588738	93588738	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020211.2	-1	reviewed	p.I281	0.986	58	0%	54	20.4%	-	-	-	-	-	HMMPfam_RGM_C
MEF2A	4205	genome.wustl.edu	37	15	100252748	100252748	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005587.2	+1	reviewed	p.P424	0.015	50	0%	62	30.6%	-	-	-	-	-	NULL
CCDC154	645811	genome.wustl.edu	37	16	1486029	1486029	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001143980.1	-1	provisional	p.L516	1.000	95	0%	104	25%	-	-	-	-	-	NULL
TSC2	7249	genome.wustl.edu	37	16	2134621	2134621	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000548.3	+1	reviewed	p.S1466	0.008	38	0%	39	15.4%	-	-	-	-	-	superfamily_Rap/Ran-GAP (Pfam 02145)
GLIS2	84662	genome.wustl.edu	37	16	4382406	4382406	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032575.2	+1	reviewed	p.L42P	1.000	40	0%	33	39.4%	-	-	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	NULL
PPL	5493	genome.wustl.edu	37	16	4934240	4934240	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002705.4	-1	reviewed	p.R1472	0.997	26	0%	35	31.4%	-	-	-	-	-	NULL
TNRC6A	27327	genome.wustl.edu	37	16	24802902	24802904	+	In_Frame_Del	DEL	AAG	AAG	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014494.2	+1	reviewed	p.E983in_frame_del	1.000:0.997:1.000	-	-	-	-	-	-	-	-	-	NULL
IL21R	50615	genome.wustl.edu	37	16	27445681	27445681	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021798.2	+1	reviewed	p.P21	0.000	131	0%	170	22.4%	-	-	-	-	-	NULL
KIAA0556	23247	genome.wustl.edu	37	16	27789941	27789941	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015202.2	+1	validated	p.R1616	0.952	101	0%	173	15%	-	-	-	-	-	NULL
APOBR	55911	genome.wustl.edu	37	16	28508599	28508599	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018690.2	+1	reviewed	p.A737D	0.002	52	0%	88	12.5%	-	-	probably_damaging(0.979)	tolerated(0.06)	deleterious(0.744)	NULL
GNAO1	2775	genome.wustl.edu	37	16	56370730	56370730	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020988.2	+1	validated	p.A227	0.143	128	0%	138	35.5%	-	-	-	-	-	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
NLRC5	84166	genome.wustl.edu	37	16	57059733	57059733	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032206.3	+1	validated	p.Q293P	0.488	115	0.9%	156	23.7%	-	-	possibly_damaging(0.669)	tolerated(0.15)	deleterious(0.478)	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIFC3	3801	genome.wustl.edu	37	16	57792822	57792822	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005550.3	-1	validated	e18-1	1.000	19	0%	23	39.1%	-	-	-	-	-	-
SLC9A5	6553	genome.wustl.edu	37	16	67291250	67291251	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004594.2	+1	validated	p.L446fs	1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Na_H_Exchanger
DUS2L	54920	genome.wustl.edu	37	16	68107939	68107939	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017803.3	+1	provisional	p.A271	0.045	174	0%	223	25.1%	-	-	-	-	-	HMMPfam_Dus,superfamily_FMN-linked oxidoreductases
DUS2L	54920	genome.wustl.edu	37	16	68109409	68109409	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017803.3	+1	provisional	e12+2	1.000	119	0%	202	23.3%	-	-	-	-	-	-
AARS	16	genome.wustl.edu	37	16	70303650	70303650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001605.2	-1	reviewed	p.P278L	0.996	134	0%	149	25.5%	-	-	benign(0.163)	deleterious(0.02)	neutral(0.398)	superfamily_Ala-tRNA-synth_IIc_anticod-bd,HMMPfam_tRNA-synt_2c
FTSJD1	55783	genome.wustl.edu	37	16	71318165	71318165	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001099642.1	-1	validated	p.E553	0.001	47	0%	160	25.6%	-	-	-	-	-	NULL
ZNF23	7571	genome.wustl.edu	37	16	71483197	71483197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145911.1	-1	provisional	p.T244I	0.989	148	0%	291	26.1%	-	-	probably_damaging(0.991)	tolerated(0.07)	deleterious(0.763)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF23	7571	genome.wustl.edu	37	16	71483628	71483630	+	In_Frame_Del	DEL	CTT	CTT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145911.1	-1	provisional	p.K100in_frame_del	0.799:0.846:0.871	-	-	-	-	-	-	-	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72830903	72830904	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006885.3	-1	reviewed	p.R1893fs	0.999:0.991	-	-	-	-	-	-	-	-	-	NULL
CLEC18B	497190	genome.wustl.edu	37	16	74446703	74446703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001011880.2	-1	validated	p.C251Y	1.000	1122	0%	1456	8.2%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2
ZFP1	162239	genome.wustl.edu	37	16	75203844	75203844	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_153688.2	+1	validated	p.Q279R	1.000	102	0%	213	26.8%	-	-	possibly_damaging(0.486)	tolerated(0.38)	neutral(0.179)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CDYL2	124359	genome.wustl.edu	37	16	80646689	80646689	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152342.2	-1	validated	p.V351A	0.999	91	0%	191	27.7%	-	-	possibly_damaging(0.815)	tolerated(1)	neutral(0.307)	HMMPfam_ECH,superfamily_SSF52096
WFDC1	58189	genome.wustl.edu	37	16	84328650	84328652	+	In_Frame_Del	DEL	CTC	CTC	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021197.2	+1	reviewed	p.L26in_frame_del	0.009:0.009:0.001	-	-	-	-	-	-	-	-	-	NULL
KIAA1609	57707	genome.wustl.edu	37	16	84514234	84514234	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020947.3	-1	validated	p.T386	0.039	146	0%	211	28.4%	-	-	-	-	-	HMMPfam_TLD,HMMSmart_SM00584
CBFA2T3	863	genome.wustl.edu	37	16	88967925	88967925	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005187.4	-1	reviewed	p.F97	1.000	24	0%	24	50%	-	-	-	-	-	NULL
MYO1C	4641	genome.wustl.edu	37	17	1375295	1375295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080779.1	-1	reviewed	p.R643C	1.000	76	0%	97	15.5%	-	-	probably_damaging(1)	tolerated(0.24)	deleterious(0.537)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
WDR81	124997	genome.wustl.edu	37	17	1629646	1629646	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000409644	+1	known	p.G465R	1.000	47	0%	33	24.2%	-	-	benign(0.011)	tolerated(0.33)	neutral(0.025)	HMMPfam_Beach,superfamily_BEACH domain
ATP2A3	489	genome.wustl.edu	37	17	3833630	3833630	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_174953.1	-1	reviewed	p.V903	1.000	155	0%	182	28.6%	-	-	-	-	-	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M
PLD2	5338	genome.wustl.edu	37	17	4717771	4717773	+	In_Frame_Del	DEL	GAG	GAG	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002663.3	+1	validated	p.E358in_frame_del	0.998:1.000:1.000	-	-	-	-	-	-	-	-	-	superfamily_Phospholipase D/nuclease
MINK1	50488	genome.wustl.edu	37	17	4791001	4791001	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_153827.4	+1	reviewed	p.D382	1.000	32	0%	45	28.9%	-	-	-	-	-	NULL
ENO3	2027	genome.wustl.edu	37	17	4860152	4860152	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001976.3	+1	reviewed	p.S401	0.084	335	0%	512	31.1%	-	-	-	-	-	HMMPfam_Enolase_C,superfamily_Enolase C-terminal domain-like
KIF1C	10749	genome.wustl.edu	37	17	4927297	4927297	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006612.5	+1	validated	p.P1055S	0.998	102	0%	192	27.1%	-	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	NULL
TNK1	8711	genome.wustl.edu	37	17	7287828	7287828	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003985.3	+1	validated	p.G298R	1.000	86	0%	87	19.5%	-	-	benign(0.37)	tolerated(1)	neutral(0.117)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
FXR2	9513	genome.wustl.edu	37	17	7497290	7497290	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004860.3	-1	reviewed	p.R351	0.996	112	0%	237	12.2%	-	-	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
KCNAB3	9196	genome.wustl.edu	37	17	7830993	7830993	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004732.2	-1	reviewed	p.G102	0.990	165	0%	319	26%	-	-	-	-	-	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red
DNAH9	1770	genome.wustl.edu	37	17	11840725	11840725	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001372.3	+1	reviewed	p.N4182	0.251	181	0%	280	29.3%	-	-	-	-	-	HMMPfam_Dynein_heavy
FLII	2314	genome.wustl.edu	37	17	18156936	18156936	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002018.2	-1	reviewed	p.T259	0.008	168	0%	209	35.9%	-	-	-	-	-	HMMSmart_LRR_TYP,superfamily_SSF52058
TLCD1	116238	genome.wustl.edu	37	17	27052323	27052323	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_138463.3	-1	validated	p.M120T	1.000	80	0%	122	36.9%	-	-	possibly_damaging(0.679)	deleterious(0.04)	deleterious(0.591)	HMMPfam_TRAM_LAG1_CLN8,HMMSmart_TLC
SEZ6	124925	genome.wustl.edu	37	17	27285151	27285151	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_178860.4	-1	validated	p.R706C	1.000	93	0%	143	28%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CORO6	84940	genome.wustl.edu	37	17	27948430	27948430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032854.3	-1	validated	p.R4C	1.000	142	0%	149	29.5%	-	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_DUF1899
CCT6B	10693	genome.wustl.edu	37	17	33269593	33269593	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006584.2	-1	reviewed	p.K265N	1.000	111	0%	436	34.4%	-	-	benign(0.387)	deleterious(0.02)	deleterious(0.507)	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like,superfamily_GroEL apical domain-like,superfamily_GroEL-intermediate domain like
RASL10B	91608	genome.wustl.edu	37	17	34067550	34067550	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033315.3	+1	validated	p.T113	0.999	71	0%	114	29.8%	-	-	-	-	-	HMMPfam_Miro,superfamily_SSF52540
MYO19	80179	genome.wustl.edu	37	17	34864957	34864957	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025109.5	-1	validated	p.V392A	1.000	119	0.8%	150	31.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
GSDMB	55876	genome.wustl.edu	37	17	38068663	38068663	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001042471.1	-1	reviewed	p.G108D	0.000	255	0.4%	624	27.4%	-	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	HMMPfam_Gasdermin
CASC3	22794	genome.wustl.edu	37	17	38324465	38324465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007359.4	+1	reviewed	p.P587L	1.000	328	0%	549	25.7%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
AOC3	8639	genome.wustl.edu	37	17	41006734	41006734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003734.2	+1	reviewed	p.G624C	0.203	44	0%	35	31.4%	-	-	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	HMMPfam_Cu_amine_oxid,superfamily_CuNH_oxidase
AARSD1	80755	genome.wustl.edu	37	17	41102658	41102658	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001136042.2	-1	validated	p.A571	0.986	179	0%	275	28.4%	-	-	-	-	-	NULL
GPATCH8	23131	genome.wustl.edu	37	17	42477032	42477032	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001002909.1	-1	validated	p.S805C	0.976	180	0%	258	34.5%	-	-	unknown(0)	tolerated(0.17)	-	NULL
MYL4	4635	genome.wustl.edu	37	17	45297350	45297350	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001002841.1	+1	reviewed	p.L82	1.000	116	0%	153	34.6%	-	-	-	-	-	superfamily_SSF47473
EME1	146956	genome.wustl.edu	37	17	48452837	48452839	+	In_Frame_Del	DEL	GAA	GAA	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152463.2	+1	reviewed	p.E92in_frame_del	0.986:0.888:0.860	-	-	-	-	-	-	-	-	-	NULL
DDX42	11325	genome.wustl.edu	37	17	61887906	61887906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007372.2	+1	reviewed	p.R429H	1.000	149	0%	441	31.5%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
TEX2	55852	genome.wustl.edu	37	17	62226408	62226408	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018469.3	-1	validated	p.I1109T	0.996	116	0%	195	31.3%	-	-	benign(0.046)	deleterious(0.01)	neutral(0.408)	NULL
LOC124685	124685	genome.wustl.edu	37	17	69617452	69617452	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XR_040247.2	+1	model	NULL	1.000	26	0%	58	25.9%	-	-	-	-	-	-
FAM104A	84923	genome.wustl.edu	37	17	71208827	71208827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001098832.1	-1	validated	p.A125E	0.010	349	0%	582	27.3%	-	-	benign(0.367)	tolerated(0.06)	neutral(0.439)	NULL
OTOP3	347741	genome.wustl.edu	37	17	72945469	72945469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_178233.1	+1	provisional	p.M583I	1.000	79	0%	118	15.3%	-	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_DUF270
KIAA0195	9772	genome.wustl.edu	37	17	73490739	73490739	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014738.4	+1	validated	p.D813	1.000	60	0%	76	43.4%	-	-	-	-	-	NULL
QRICH2	84074	genome.wustl.edu	37	17	74276157	74276157	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032134.1	-1	provisional	p.R1403C	0.849	53	0%	62	41.9%	-	-	probably_damaging(0.991)	tolerated(0.17)	deleterious(0.503)	NULL
AFMID	125061	genome.wustl.edu	37	17	76200751	76200751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001145526.1	+1	validated	p.A108V	1.000	94	0%	108	13%	-	-	probably_damaging(0.991)	tolerated(0.06)	deleterious(0.766)	superfamily_alpha/beta-Hydrolases
USP36	57602	genome.wustl.edu	37	17	76798404	76798404	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_025090.3	-1	validated	e15+2	0.010	57	0%	65	33.8%	-	-	-	-	-	-
GPS1	2873	genome.wustl.edu	37	17	80014832	80014832	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_212492.1	+1	reviewed	p.R497	0.998	54	0%	68	39.7%	-	-	-	-	-	NULL
RNMT	8731	genome.wustl.edu	37	18	13759960	13759961	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003799.1	+1	provisional	p.E472fs	1.000:1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Pox_MCEL,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
GREB1L	80000	genome.wustl.edu	37	18	19088527	19088527	+	Silent	SNP	C	C	T	rs181760697	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001142966.1	+1	provisional	p.P1570	0.036	64	0%	122	31.1%	-	-	-	-	-	NULL
DSG4	147409	genome.wustl.edu	37	18	28983494	28983494	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001134453.1	+1	reviewed	p.V511	0.001	231	0%	491	31.2%	-	-	-	-	-	superfamily_Cadherin
SETBP1	26040	genome.wustl.edu	37	18	42281510	42281510	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015559.2	+1	validated	p.R67	1.000	76	0%	173	30.6%	-	-	-	-	-	NULL
LOC100131669	100131669	genome.wustl.edu	37	18	42643648	42643648	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_001715120.1	-1	model	p.R29H	0.989	18	0%	30	23.3%	-	-	-	-	-	NULL
SLC14A2	8170	genome.wustl.edu	37	18	43262294	43262294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007163.3	+1	validated	p.P858L	1.000	368	0%	688	31.8%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UT
SLC14A1	6563	genome.wustl.edu	37	18	43307323	43307323	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001128588.3	+1	reviewed	p.D29	0.979	50	0%	101	35.6%	-	-	-	-	-	NULL
EPG5	57724	genome.wustl.edu	37	18	43519643	43519643	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020964.2	-1	validated	p.P674	0.993	162	0%	261	29.5%	-	-	-	-	-	NULL
C18orf25	147339	genome.wustl.edu	37	18	43796270	43796270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145055.3	+1	validated	p.R142W	0.996	41	0%	86	19.8%	-	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
CTIF	9811	genome.wustl.edu	37	18	46284714	46284714	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001142397.1	+1	validated	p.R337W	1.000	24	0%	34	26.5%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DYM	54808	genome.wustl.edu	37	18	46906048	46906048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017653.3	-1	reviewed	p.A92T	1.000	107	0%	427	27.4%	-	-	benign(0)	tolerated(0.59)	neutral(0.004)	HMMPfam_Dymeclin
ONECUT2	9480	genome.wustl.edu	37	18	55103371	55103371	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004852.2	+1	reviewed	p.G141	0.999	132	0%	194	28.4%	-	-	-	-	-	NULL
ZADH2	284273	genome.wustl.edu	37	18	72914045	72914045	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_175907.4	-1	validated	p.L154	1.000	71	0%	143	28%	-	-	-	-	-	superfamily_GroES-like,superfamily_NAD(P)-binding Rossmann-fold domains
POLR2E	5434	genome.wustl.edu	37	19	1091902	1091902	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002695.3	-1	reviewed	p.E79	1.000	114	0%	137	38.7%	-	-	-	-	-	HMMPfam_RNA_pol_Rpb5_N,superfamily_RNA_pol_Rpb5_N
SGTA	6449	genome.wustl.edu	37	19	2769040	2769040	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003021.3	-1	reviewed	p.Y9	0.995	101	0%	169	28.4%	-	-	-	-	-	NULL
SH3GL1	6455	genome.wustl.edu	37	19	4361702	4361702	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003025.2	-1	provisional	p.T334	0.908	108	0%	127	29.1%	-	-	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
PLIN5	440503	genome.wustl.edu	37	19	4531717	4531717	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001013706.2	-1	validated	p.A60T	0.998	21	0%	15	33.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Perilipin
SAFB	6294	genome.wustl.edu	37	19	5661612	5661613	+	Frame_Shift_Del	DEL	GA	GA	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002967.2	+1	reviewed	p.R651fs	1.000:0.165	-	-	-	-	-	-	-	-	-	superfamily_SSF54928
FUT6	2528	genome.wustl.edu	37	19	5832208	5832208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000150.2	-1	reviewed	p.P124L	0.000	96	0%	90	44.4%	-	-	benign(0.004)	tolerated(0.2)	neutral(0.049)	HMMPfam_Glyco_transf_10
MARCH2	51257	genome.wustl.edu	37	19	8503351	8503351	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001005415.1	+1	validated	p.A221V	0.000	45	0%	82	39%	-	-	benign(0.017)	deleterious(0)	neutral(0.445)	NULL
ZNF426	79088	genome.wustl.edu	37	19	9639292	9639292	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024106.1	-1	provisional	p.E477K	0.000	156	0%	314	29%	-	-	benign(0.195)	tolerated(0.06)	neutral(0.341)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
RGL3	57139	genome.wustl.edu	37	19	11517269	11517269	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000453604	-1	known	p.R193C	0.996	12	0%	17	41.2%	-	-	unknown(0)	-	-	NULL
ZNF563	147837	genome.wustl.edu	37	19	12429746	12429746	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_145276.2	-1	validated	p.Y365H	0.116	352	0%	531	28.6%	-	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
GCDH	2639	genome.wustl.edu	37	19	13004423	13004423	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000159.2	+1	reviewed	p.A154V	1.000	212	0.5%	273	31.1%	-	-	benign(0.001)	deleterious(0.05)	neutral(0.345)	HMMPfam_Acyl-CoA_dh_N,superfamily_Acyl-CoA dehydrogenase NM domain-like
CC2D1A	54862	genome.wustl.edu	37	19	14024095	14024095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017721.4	+1	reviewed	p.R165C	0.999	23	0%	41	31.7%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00685
LPHN1	22859	genome.wustl.edu	37	19	14274004	14274004	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001008701.2	-1	reviewed	p.P208	1.000	118	0%	108	30.6%	-	-	-	-	-	HMMPfam_OLF,HMMSmart_SM00284
AKAP8	10270	genome.wustl.edu	37	19	15484714	15484714	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005858.2	-1	reviewed	p.C85Y	0.445	139	0%	160	19.4%	-	-	possibly_damaging(0.828)	deleterious(0)	deleterious(0.758)	superfamily_SSF56935
CPAMD8	27151	genome.wustl.edu	37	19	17122459	17122459	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015692.2	-1	validated	p.R173W	1.000	73	0%	86	30.2%	-	-	benign(0.138)	deleterious(0)	neutral(0.456)	HMMPfam_A2M_N
MYO9B	4650	genome.wustl.edu	37	19	17305499	17305499	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004145.3	+1	reviewed	p.P1088L	0.000	41	2.4%	43	41.9%	-	-	benign(0)	tolerated(0.79)	neutral(0.001)	NULL
FKBP8	23770	genome.wustl.edu	37	19	18652735	18652735	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012181.3	-1	reviewed	p.A16T	0.001	81	0%	84	35.7%	-	-	unknown(0)	tolerated(0.08)	-	NULL
SUGP2	10147	genome.wustl.edu	37	19	19136053	19136053	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001017392.3	-1	reviewed	p.S368	0.460	4	0.000	21	0.476	-	-	-	-	-	NULL
ENSG00000221790	0	genome.wustl.edu	37	19	22785562	22785562	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000408863	+1	novel	NULL	0.017	43	0%	56	28.6%	-	-	-	-	-	-
ZNF507	22847	genome.wustl.edu	37	19	32843945	32843945	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001136156.1	+1	validated	p.R70H	1.000	57	0%	180	25.6%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ANKRD27	84079	genome.wustl.edu	37	19	33098591	33098591	+	Missense_Mutation	SNP	C	C	T	rs148333561	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032139.2	-1	validated	p.A775T	0.001	61	0%	63	23.8%	-	-	benign(0)	tolerated(0.62)	neutral(0.004)	HMMPfam_Ank,superfamily_ANK
ANKRD27	84079	genome.wustl.edu	37	19	33134038	33134038	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032139.2	-1	validated	p.P258L	1.000	184	0%	318	26.7%	-	-	benign(0.351)	deleterious(0.01)	deleterious(0.517)	superfamily_SSF109993
TDRD12	91646	genome.wustl.edu	37	19	33229900	33229900	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001110822.1	+1	validated	e3+2	0.998	157	0%	313	31.9%	-	-	-	-	-	-
KIAA0355	9710	genome.wustl.edu	37	19	34791796	34791796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014686.3	+1	validated	p.A140T	1.000	66	0%	69	13%	-	-	probably_damaging(0.955)	deleterious(0.01)	deleterious(0.804)	NULL
NFKBID	84807	genome.wustl.edu	37	19	36386974	36386974	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_139239.1	-1	provisional	p.D172N	0.000	195	0.5%	308	29.5%	-	-	benign(0)	tolerated(0.08)	neutral(0.300)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
SIPA1L3	23094	genome.wustl.edu	37	19	38643572	38643572	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015073.1	+1	validated	p.T1209I	1.000	88	0%	133	28.6%	-	-	probably_damaging(0.959)	tolerated(0.08)	deleterious(0.703)	NULL
RYR1	6261	genome.wustl.edu	37	19	38990439	38990439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000540.2	+1	reviewed	p.R2398C	1.000	53	0%	56	28.6%	-	-	probably_damaging(0.993)	-	-	NULL
MAP4K1	11184	genome.wustl.edu	37	19	39100593	39100593	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_007181.4	-1	validated	p.G295R	0.933	167	0%	257	27.6%	-	-	possibly_damaging(0.907)	tolerated(0.09)	deleterious(0.657)	superfamily_Kinase_like
ENSG00000213926	0	genome.wustl.edu	37	19	39745758	39745758	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000396851	-1	known	p.R51H	0.264	33	0%	35	42.9%	-	-	-	-	-	HMMPfam_SelR,superfamily_Mss4-like
DLL3	10683	genome.wustl.edu	37	19	39994847	39994847	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016941.3	+1	reviewed	p.P263	0.001	101	0%	147	25.2%	-	-	-	-	-	NULL
CYP2B6	1555	genome.wustl.edu	37	19	41522584	41522584	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000767.4	+1	reviewed	p.R443H	0.867	131	0%	205	22.9%	-	-	possibly_damaging(0.734)	deleterious(0)	deleterious(0.713)	HMMPfam_p450,superfamily_Cytochrome_P450
DMRTC2	63946	genome.wustl.edu	37	19	42351809	42351809	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001040283.1	+1	validated	p.R77H	1.000	71	0%	104	26%	-	-	probably_damaging(0.973)	tolerated(0.35)	neutral(0.435)	HMMPfam_DM,HMMSmart_SM00301,superfamily_Cysteine-rich DNA binding domain (DM domain)
ARHGEF1	9138	genome.wustl.edu	37	19	42398285	42398285	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_199002.1	+1	reviewed	p.A232V	0.981	155	0%	235	25.1%	-	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	HMMPfam_RGS-like,superfamily_Regulat_G_prot_signal_superfam
ZFP112	7771	genome.wustl.edu	37	19	44833835	44833835	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001083335.1	-1	validated	p.G165S	0.184	69	0%	186	28%	-	-	benign(0.004)	tolerated(0.69)	neutral(0.002)	NULL
PPP1R13L	10848	genome.wustl.edu	37	19	45895307	45895307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001142502.1	-1	validated	p.R549H	1.000	70	0%	66	25.8%	-	-	unknown(0)	deleterious(0.01)	-	NULL
CCDC61	729440	genome.wustl.edu	37	19	46519482	46519482	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080402.1	+1	provisional	e9+1	1.000	26	0%	30	33.3%	-	-	-	-	-	-
PPP5C	5536	genome.wustl.edu	37	19	46890686	46890686	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006247.2	+1	provisional	p.R371W	1.000	63	0%	99	30.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
PRKD2	25865	genome.wustl.edu	37	19	47214265	47214265	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001079880.1	-1	reviewed	p.R137H	1.000	49	0%	100	25%	-	-	possibly_damaging(0.947)	tolerated(0.1)	deleterious(0.677)	superfamily_Cysteine-rich domain
GRIN2D	2906	genome.wustl.edu	37	19	48925087	48925087	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000836.2	+1	reviewed	p.V713M	1.000	74	0%	154	29.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
KCNJ14	3770	genome.wustl.edu	37	19	48965069	48965069	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013348.2	+1	reviewed	p.G30W	0.668	11	0%	14	42.9%	-	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
IZUMO1	284359	genome.wustl.edu	37	19	49244262	49244262	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_182575.2	-1	validated	p.I319T	0.000	201	0%	295	26.1%	-	-	benign(0.221)	tolerated(0.24)	neutral(0.059)	NULL
GYS1	2997	genome.wustl.edu	37	19	49473948	49473948	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002103.4	-1	reviewed	p.R555Q	1.000	60	0%	82	32.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glycogen_syn,superfamily_SSF53756
AP2A1	160	genome.wustl.edu	37	19	50308789	50308789	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014203.2	+1	reviewed	p.C830	0.988	40	0%	45	20%	-	-	-	-	-	HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,superfamily_Clathrin adaptor appendage domain
SIGLEC5	8778	genome.wustl.edu	37	19	52133126	52133126	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003830.2	-1	validated	p.K127	0.000	283	0%	505	28.9%	-	-	-	-	-	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
FPR3	2359	genome.wustl.edu	37	19	52327045	52327045	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002030.3	+1	validated	p.V15A	0.000	134	0%	221	24%	-	-	benign(0.013)	tolerated(0.54)	neutral(0.008)	superfamily_Family A G protein-coupled receptor-like
ZNF766	90321	genome.wustl.edu	37	19	52793889	52793889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001010851.2	+1	validated	p.R282Q	0.000	113	0%	151	29.1%	-	-	benign(0.078)	tolerated(0.5)	neutral(0.015)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
BIRC8	112401	genome.wustl.edu	37	19	53793229	53793229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033341.3	-1	validated	p.E133D	0.478	154	0%	554	26.5%	-	-	possibly_damaging(0.533)	tolerated(0.08)	deleterious(0.480)	superfamily_Inhibitor of apoptosis (IAP) repeat
PPP6R1	22870	genome.wustl.edu	37	19	55758474	55758474	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000443936	-1	known	p.A62T	1.000	27	0%	26	26.9%	-	-	-	-	-	NULL
IL11	3589	genome.wustl.edu	37	19	55877518	55877518	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000641.2	-1	reviewed	p.P153T	0.027	6	0.000	14	0.429	-	-	benign(0.146)	tolerated(0.98)	neutral(0.013)	HMMPfam_IL11
NLRP9	338321	genome.wustl.edu	37	19	56244537	56244537	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_176820.2	-1	reviewed	p.P220	0.036	71	0%	123	20.3%	-	-	-	-	-	HMMPfam_NACHT
SNPH	9751	genome.wustl.edu	37	20	1276953	1276953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000381867	+1	known	p.R24C	1.000	51	0%	108	30.6%	-	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
SIRPB2	284759	genome.wustl.edu	37	20	1471921	1471921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001122962.1	-1	validated	p.D29Y	0.992	87	0%	144	31.9%	-	-	benign(0.386)	tolerated(0.08)	neutral(0.423)	NULL
TMC2	117532	genome.wustl.edu	37	20	2539271	2539271	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080751.2	+1	validated	p.G84	0.001	33	0%	71	16.9%	-	-	-	-	-	NULL
ISM1	140862	genome.wustl.edu	37	20	13269261	13269261	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080826.1	+1	validated	p.R240W	1.000	131	0%	177	15.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TSP_1,HMMSmart_TSP1,superfamily_TSP1
TASP1	55617	genome.wustl.edu	37	20	13398143	13398143	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017714.2	-1	reviewed	p.T374	0.260	254	0%	580	28.8%	-	-	-	-	-	superfamily_SSF56235
GZF1	64412	genome.wustl.edu	37	20	23350768	23350768	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_022482.3	+1	validated	p.I609N	1.000	82	0%	128	26.6%	-	-	possibly_damaging(0.783)	deleterious(0)	deleterious(0.738)	NULL
ID1	3397	genome.wustl.edu	37	20	30193581	30193581	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002165.2	+1	reviewed	p.T131A	1.000	33	0%	55	27.3%	-	-	benign(0.39)	tolerated(0.25)	neutral(0.162)	superfamily_HLH helix-loop-helix DNA-binding domain
DYNLRB1	83658	genome.wustl.edu	37	20	33122512	33122512	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014183.2	+1	reviewed	p.R54W	0.902	184	0%	282	33.7%	-	-	benign(0.142)	deleterious(0.01)	neutral(0.418)	HMMPfam_Robl_LC7
UQCC	55245	genome.wustl.edu	37	20	33969807	33969807	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_018244.4	-1	reviewed	p.P83T	0.458	110	0%	351	29.3%	-	-	probably_damaging(0.998)	tolerated(0.26)	deleterious(0.508)	NULL
MYL9	10398	genome.wustl.edu	37	20	35176465	35176465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006097.3	+1	reviewed	p.G72D	1.000	85	0%	93	29%	-	-	benign(0)	tolerated(0.34)	neutral(0.023)	superfamily_EF-hand
ARHGAP40	343578	genome.wustl.edu	37	20	37255737	37255737	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000373345	+1	known	p.L93P	0.999	66	0%	113	31.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC32A1	140679	genome.wustl.edu	37	20	37356451	37356451	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080552.2	+1	reviewed	p.A249	0.998	146	0%	177	11.3%	-	-	-	-	-	HMMPfam_Aa_trans
SLC32A1	140679	genome.wustl.edu	37	20	37356740	37356740	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080552.2	+1	reviewed	p.A346T	1.000	90	0%	96	33.3%	-	-	benign(0.009)	tolerated(0.09)	neutral(0.297)	HMMPfam_Aa_trans
ZHX3	23051	genome.wustl.edu	37	20	39832108	39832108	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000421422	-1	known	p.P192S	1.000	118	0%	202	29.2%	-	-	-	-	-	NULL
PTPRT	11122	genome.wustl.edu	37	20	40739027	40739027	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_133170.3	-1	reviewed	p.R1086H	1.000	85	0%	134	31.3%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
IFT52	51098	genome.wustl.edu	37	20	42223379	42223379	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016004.2	+1	validated	p.Y14C	1.000	119	0%	311	26.4%	-	-	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
MYBL2	4605	genome.wustl.edu	37	20	42320887	42320887	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002466.2	+1	reviewed	p.K197N	0.986	55	0%	79	31.6%	-	-	benign(0.005)	tolerated(0.33)	neutral(0.024)	NULL
JPH2	57158	genome.wustl.edu	37	20	42815023	42815023	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020433.4	-1	reviewed	p.G108D	1.000	127	0%	204	28.9%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
FITM2	128486	genome.wustl.edu	37	20	42935630	42935630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001080472.1	-1	provisional	p.Q142K	0.000	192	0%	276	26.4%	-	-	benign(0)	tolerated(1)	-	HMMPfam_Scs3p
TOMM34	10953	genome.wustl.edu	37	20	43571778	43571778	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006809.4	-1	reviewed	p.R301Q	0.659	279	0%	503	15.5%	-	-	benign(0.004)	tolerated(0.37)	neutral(0.019)	superfamily_Prenyl_trans
ZSWIM3	140831	genome.wustl.edu	37	20	44505870	44505870	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080752.2	+1	validated	p.R225W	1.000	109	0%	206	28.6%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_MULE
ZSWIM3	140831	genome.wustl.edu	37	20	44506882	44506882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080752.2	+1	validated	p.R562Q	1.000	140	0%	149	30.2%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_ZnF_PMZ,HMMPfam_SWIM
NPEPL1	79716	genome.wustl.edu	37	20	57289002	57289002	+	Silent	SNP	G	G	A	rs141269167	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024663.3	+1	validated	p.A385	0.001	38	0%	62	32.3%	-	-	-	-	-	PatternScan_RCC1_2,HMMPfam_Peptidase_M17,superfamily_Zn-dependent exopeptidases
GNAS	2778	genome.wustl.edu	37	20	57429287	57429287	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080425.2	+1	reviewed	p.V323I	1.000	39	2.6%	56	32.1%	-	-	unknown(0)	tolerated(0.11)	-	NULL
CDH4	1002	genome.wustl.edu	37	20	60503310	60503310	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001794.2	+1	reviewed	p.A612T	1.000	41	0%	57	15.8%	-	-	benign(0.278)	deleterious(0.01)	neutral(0.435)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
ABHD16B	140701	genome.wustl.edu	37	20	62493995	62493995	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_080622.3	+1	validated	p.V368I	0.188	10	0%	17	47.1%	-	-	possibly_damaging(0.67)	tolerated(0.1)	deleterious(0.524)	superfamily_SSF53474
PRPF6	24148	genome.wustl.edu	37	20	62663358	62663358	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_012469.3	+1	reviewed	p.W878C	1.000	210	0.5%	309	29.4%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF48452
BACH1	571	genome.wustl.edu	37	21	30715070	30715070	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001186.2	+1	reviewed	p.A709	0.000	59	0%	114	36.8%	-	-	-	-	-	NULL
KRTAP26-1	388818	genome.wustl.edu	37	21	31692151	31692151	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_203405.1	-1	validated	p.P68L	0.983	151	0%	267	29.2%	-	-	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	HMMPfam_PMG
KRTAP22-2	100288287	genome.wustl.edu	37	21	31962679	31962679	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000382830	-1	known	p.H5Q	0.000	116	0%	235	28.9%	-	-	benign(0.021)	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41427706	41427706	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001389.3	-1	validated	p.D1661N	1.000	228	0%	500	28.6%	-	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
MX2	4600	genome.wustl.edu	37	21	42767548	42767548	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_002463.1	+1	reviewed	p.G302	0.037	212	0%	334	29.9%	-	-	-	-	-	HMMSmart_DYNc,superfamily_SSF52540
C21orf2	755	genome.wustl.edu	37	21	45753026	45753026	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004928.2	-1	validated	p.R88H	0.997	38	0%	27	25.9%	-	-	benign(0.261)	tolerated(0.46)	neutral(0.039)	superfamily_Outer arm dynein light chain 1
SLC19A1	6573	genome.wustl.edu	37	21	46935906	46935906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_194255.1	-1	validated	p.A481V	0.000	21	0%	31	48.4%	-	-	benign(0.002)	tolerated(0.62)	neutral(0.004)	NULL
YBEY	54059	genome.wustl.edu	37	21	47711367	47711367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_058181.1	+1	validated	p.D110	0.000	200	0%	282	25.9%	-	-	-	-	-	"HMMPfam_UPF0054,superfamily_Metalloproteases (""zincins"") catalytic domain"
C22orf25	128989	genome.wustl.edu	37	22	20043531	20043531	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152906.4	+1	validated	p.T149M	0.020	246	0%	321	23.7%	-	-	possibly_damaging(0.768)	tolerated(0.06)	deleterious(0.607)	HMMPfam_DUF833
DGCR6L	85359	genome.wustl.edu	37	22	20302286	20302286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_033257.2	-1	reviewed	p.R192Q	0.039	66	0%	109	37.6%	-	-	benign(0.009)	tolerated(0.79)	neutral(0.002)	HMMPfam_DGCR6
ZNF74	7625	genome.wustl.edu	37	22	20759891	20759891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003426.2	+1	validated	p.R190C	0.001	52	0%	89	32.6%	-	-	unknown(0)	-	-	NULL
LZTR1	8216	genome.wustl.edu	37	22	21348942	21348942	+	Missense_Mutation	SNP	G	G	A	rs5761750		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006767.3	+1	reviewed	p.E571K	1.000	103	0%	125	26.4%	-	-	benign(0.032)	tolerated(0.58)	neutral(0.007)	HMMSmart_SM00225,superfamily_POZ domain
HIC2	23119	genome.wustl.edu	37	22	21800636	21800636	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015094.2	+1	validated	p.A484	0.020	30	0%	44	25%	-	-	-	-	-	NULL
GGT5	2687	genome.wustl.edu	37	22	24628803	24628803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001099781.1	-1	reviewed	p.A195V	0.000	43	0%	66	25.8%	-	-	benign(0.03)	tolerated(0.27)	neutral(0.035)	HMMPfam_G_glu_transpept
MYO18B	84700	genome.wustl.edu	37	22	26423043	26423043	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032608.5	+1	reviewed	p.P2368L	0.064	68	0%	123	26.8%	-	-	possibly_damaging(0.934)	deleterious(0)	deleterious(0.825)	NULL
EWSR1	2130	genome.wustl.edu	37	22	29694725	29694733	+	In_Frame_Del	DEL	CCAGGAGGC	CCAGGAGGC	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CCAGGAGGC	CCAGGAGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005243.3	+1	reviewed	p.PGG477in_frame_del	1.000:1.000:0.962:0.995:0.992:0.725:0.997:1.000:1.000	-	-	-	-	-	-	-	-	-	superfamily_RNA-binding domain RBD
AP1B1	162	genome.wustl.edu	37	22	29726515	29726515	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001127.3	-1	reviewed	p.A873V	0.971	60	0%	80	23.7%	-	-	benign(0)	tolerated(1)	-	superfamily_Subdomain of clathrin and coatomer appendage domain,HMMPfam_B2-adapt-app_C
RNF215	200312	genome.wustl.edu	37	22	30776163	30776163	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001017981.1	-1	validated	p.R299K	0.974	73	0%	81	45.7%	-	-	probably_damaging(0.971)	tolerated(0.07)	deleterious(0.732)	NULL
KCNJ4	3761	genome.wustl.edu	37	22	38824085	38824085	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004981.1	-1	reviewed	p.R18H	1.000	152	0%	157	34.4%	-	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_SSF81324
GTPBP1	9567	genome.wustl.edu	37	22	39122110	39122110	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004286.4	+1	reviewed	p.E391	1.000	174	0%	321	32.1%	-	-	-	-	-	superfamily_Translat_factor,superfamily_SSF52540
ACO2	50	genome.wustl.edu	37	22	41911780	41911780	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001098.2	+1	reviewed	p.V232M	1.000	170	0%	194	28.9%	-	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Aconitase,superfamily_Aconitase_N
MEI1	150365	genome.wustl.edu	37	22	42180355	42180356	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_152513.3	+1	validated	p.S1035fs	0.088:0.095	-	-	-	-	-	-	-	-	-	NULL
SREBF2	6721	genome.wustl.edu	37	22	42271662	42271662	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004599.2	+1	reviewed	p.S440	0.970	102	0%	206	25.7%	-	-	-	-	-	NULL
EFCAB6	64800	genome.wustl.edu	37	22	44079700	44079700	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_022785.2	-1	validated	p.I393S	0.000	420	0%	916	28.5%	-	-	possibly_damaging(0.81)	deleterious(0)	deleterious(0.750)	NULL
SAMM50	25813	genome.wustl.edu	37	22	44386233	44386233	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015380.4	+1	validated	p.I437	0.619	96	0%	158	28.5%	-	-	-	-	-	HMMPfam_Bac_surface_Ag
SCO2	9997	genome.wustl.edu	37	22	50962076	50962076	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005138.2	-1	reviewed	p.R255	0.396	75	0%	109	33.9%	-	-	-	-	-	superfamily_Thiordxn-like_fd
PPP2R3B	28227	genome.wustl.edu	37	X	295123	295123	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_013239.4	-1	reviewed	p.D569	0.903	23	0%	17	29.4%	-	-	-	-	-	NULL
AKAP17A	8227	genome.wustl.edu	37	X	1718117	1718117	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005088.2	+1	validated	p.E315A	1.000	142	0%	229	28.8%	-	-	unknown(0)	deleterious(0.02)	-	NULL
ZBED1	9189	genome.wustl.edu	37	X	2408423	2408423	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004729.3	-1	reviewed	p.K113R	0.013	150	0%	207	26.1%	-	-	possibly_damaging(0.605)	tolerated(0.34)	neutral(0.232)	NULL
MXRA5	25878	genome.wustl.edu	37	X	3235793	3235793	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015419.3	-1	reviewed	p.T1977A	0.015	120	0%	151	29.8%	-	-	possibly_damaging(0.495)	tolerated(0.15)	neutral(0.406)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MXRA5	25878	genome.wustl.edu	37	X	3240251	3240251	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_015419.3	-1	reviewed	p.P1159T	0.025	297	0%	754	27.6%	-	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
TMEM27	57393	genome.wustl.edu	37	X	15677154	15677154	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_020665.4	-1	reviewed	p.N63S	1.000	190	0%	482	25.9%	-	-	benign(0.001)	tolerated(0.89)	-	NULL
PHKA2	5256	genome.wustl.edu	37	X	18942595	18942595	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000292.2	-1	reviewed	p.V540M	1.000	128	0%	195	26.2%	-	-	possibly_damaging(0.819)	deleterious(0.01)	deleterious(0.715)	HMMPfam_PHK_AB
KLHL34	257240	genome.wustl.edu	37	X	21674364	21674364	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_153270.1	-1	provisional	p.A515T	1.000	22	0%	30	33.3%	-	-	probably_damaging(1)	tolerated(0.12)	deleterious(0.760)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
GK	2710	genome.wustl.edu	37	X	30712617	30712617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001128127.1	+1	reviewed	p.R172Q	1.000	120	0%	488	30.7%	-	-	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	HMMPfam_FGGY_N,superfamily_SSF53067
BCOR	54880	genome.wustl.edu	37	X	39913223	39913223	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001123385.1	-1	reviewed	p.D1631V	0.969	84	0%	216	29.6%	-	-	possibly_damaging(0.859)	deleterious(0)	deleterious(0.776)	NULL
USP9X	8239	genome.wustl.edu	37	X	40994075	40994075	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001039590.2	+1	reviewed	p.W140*	1.000	249	0%	719	30.2%	-	-	-	-	-	NULL
DDX3X	1654	genome.wustl.edu	37	X	41201786	41201786	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001356.3	+1	reviewed	p.G108D	1.000	209	0%	517	26.7%	-	-	probably_damaging(0.985)	tolerated(0.06)	deleterious(0.754)	NULL
TFE3	7030	genome.wustl.edu	37	X	48895836	48895836	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006521.4	-1	reviewed	p.P222	0.004	74	0%	96	36.5%	-	-	-	-	-	NULL
TFE3	7030	genome.wustl.edu	37	X	48896669	48896669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_006521.4	-1	reviewed	p.R166H	0.998	73	0%	130	33.1%	-	-	probably_damaging(1)	tolerated(0.55)	deleterious(0.507)	NULL
TSPYL2	64061	genome.wustl.edu	37	X	53114262	53114262	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_022117.3	+1	reviewed	p.E375G	1.000	100	0%	248	32.7%	-	-	probably_damaging(0.995)	tolerated(0.19)	deleterious(0.507)	HMMPfam_NAP
FAM120C	54954	genome.wustl.edu	37	X	54209309	54209309	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_017848.4	-1	validated	p.P108L	1.000	8	0.000	14	0.357	-	-	unknown(0)	deleterious(0)	-	NULL
ZMYM3	9203	genome.wustl.edu	37	X	70464193	70464193	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_005096.3	-1	reviewed	p.A1080V	1.000	270	0%	453	30.7%	-	-	possibly_damaging(0.832)	deleterious(0.02)	deleterious(0.700)	NULL
NAP1L2	4674	genome.wustl.edu	37	X	72434159	72434159	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_021963.2	-1	reviewed	p.E57G	0.001	161	0.6%	288	29.5%	-	-	benign(0.143)	tolerated(0.26)	neutral(0.046)	NULL
ABCB7	22	genome.wustl.edu	37	X	74280154	74280154	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_004299.3	-1	reviewed	p.G650	0.997	151	0.7%	369	27.1%	-	-	-	-	-	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540
CXorf26	51260	genome.wustl.edu	37	X	75393002	75393002	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_016500.3	+1	predicted	p.P10L	0.048	186	0%	313	29.1%	-	-	benign(0.001)	tolerated(0.42)	neutral(0.014)	NULL
ATP7A	538	genome.wustl.edu	37	X	77268478	77268478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000052.4	+1	reviewed	p.A759T	1.000	369	0%	617	30.8%	-	-	benign(0)	tolerated(0.43)	neutral(0.013)	NULL
ATP7A	538	genome.wustl.edu	37	X	77296087	77296087	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000052.4	+1	reviewed	e18-2	1.000	156	0%	352	24.7%	-	-	-	-	-	-
PCDH11X	27328	genome.wustl.edu	37	X	91133380	91133380	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032968.3	+1	reviewed	p.S714I	1.000	191	1%	327	26.6%	-	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
RAB40AL	282808	genome.wustl.edu	37	X	102192748	102192748	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001031834.1	+1	reviewed	p.T168A	1.000	133	0%	176	22.7%	-	-	possibly_damaging(0.67)	tolerated(0.49)	neutral(0.248)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
NRK	203447	genome.wustl.edu	37	X	105153256	105153256	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_198465.2	+1	validated	p.R541	0.000	90	0%	161	30.4%	-	-	-	-	-	NULL
COL4A6	1288	genome.wustl.edu	37	X	107400307	107400307	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001847.2	-1	reviewed	p.P1667S	0.997	130	0%	215	30.2%	-	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C4,HMMSmart_SM00111,superfamily_C-type lectin-like
RBMXL3	139804	genome.wustl.edu	37	X	114425733	114425733	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001145346.1	+1	validated	p.D577N	0.990	97	0%	131	32.1%	-	-	possibly_damaging(0.507)	deleterious(0)	deleterious(0.614)	NULL
LOC653155	653155	genome.wustl.edu	37	X	115882529	115882529	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_926254.3	-1	model	p.L102P	1.000	74	0%	273	30.4%	-	-	-	-	-	HMMPfam_Pkinase
DOCK11	139818	genome.wustl.edu	37	X	117700604	117700604	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_144658.3	+1	validated	p.P313	0.993	168	0%	367	31.3%	-	-	-	-	-	NULL
LONRF3	79836	genome.wustl.edu	37	X	118123614	118123614	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_001031855.1	+1	reviewed	p.P435S	0.003	59	0%	165	22.4%	-	-	benign(0)	tolerated(0.16)	neutral(0.059)	superfamily_TPR-like
ODZ1	10178	genome.wustl.edu	37	X	123805670	123805670	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014253.3	-1	reviewed	p.G344V	1.000	159	0%	333	28.5%	-	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SMARCA1	6594	genome.wustl.edu	37	X	128631868	128631868	+	Silent	SNP	A	A	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_003069.3	-1	reviewed	p.G486	1.000	115	0%	305	32.8%	-	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
ARHGAP36	158763	genome.wustl.edu	37	X	130222641	130222641	+	Missense_Mutation	SNP	G	G	A	rs182540216	by1000genomes	TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_144967.3	+1	validated	p.R509H	0.983	88	0%	179	27.4%	-	-	benign(0.001)	tolerated(0.26)	neutral(0.034)	NULL
LOC650024	650024	genome.wustl.edu	37	X	134345922	134345922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	XM_001715421.2	+1	model	p.P58L	0.000	29	0%	93	25.8%	-	-	-	-	-	NULL
MMGT1	93380	genome.wustl.edu	37	X	135047191	135047191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_173470.1	-1	provisional	p.R130C	1.000	107	0%	310	32.3%	-	-	unknown(0)	deleterious(0)	-	NULL
F9	2158	genome.wustl.edu	37	X	138633297	138633297	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000133.3	+1	reviewed	p.V199	0.000	179	0%	484	25.6%	-	-	-	-	-	NULL
MTM1	4534	genome.wustl.edu	37	X	149787586	149787586	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_000252.2	+1	reviewed	p.Y140H	0.960	162	0%	278	31.3%	-	-	benign(0.001)	tolerated(0.37)	neutral(0.019)	superfamily_SSF50729
PDZD4	57595	genome.wustl.edu	37	X	153069158	153069158	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_032512.2	-1	provisional	p.R654W	0.998	48	0%	67	29.9%	-	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
ARHGAP4	393	genome.wustl.edu	37	X	153174959	153174959	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	ENST00000454164	-1	known	p.C237Y	0.003	50	0%	56	23.2%	-	-	-	-	-	NULL
UBL4A	8266	genome.wustl.edu	37	X	153714303	153714303	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_014235.3	-1	provisional	p.S57L	0.717	115	0%	142	28.2%	-	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like
BRCC3	79184	genome.wustl.edu	37	X	154301689	154301689	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0K9-01A-21D-A10O-09	TCGA-B5-A0K9-10A-02D-A10B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3b8b4f97-eaa3-4ec9-adb1-28f0654b2b68	1e10a65e-fca9-4e29-89df-f0de0094b775	NM_024332.2	+1	reviewed	p.R60C	0.896	177	0%	478	25.5%	-	-	benign(0.007)	tolerated(0.2)	neutral(0.049)	HMMPfam_Mov34,HMMSmart_SM00232,superfamily_JAB1/MPN domain
